Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0006219

Physical Location & Seq

Genomic Coordinates Reverse (-)

7069616 .. 7073404

Gene Structure 3789 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g08940.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAGCTTCCATGCCTTCACTTGGTCGAAAAAATGTCGAATTGTTGAAGGAATGATCCTCTTGGTGATAATTGTTGTTGAAGCTTTGAGGATATCTCATATATGCCTGTACTTTTCAGCAGAGATTGCTGCTGCACAGCCTGCCTTCCAAAATCATCTCGGTACACTCAGGGCTCAAACCCCTGTTTATGGTAATGTAATTTCAAGTCCATTCGCCTTTGGAAATGACAAGAAACTGTCATCTGCTTGGAAACTCTCTCATATATCTATAAAATTGAACTTCAACTTGGGGCGCATTAACGTCCCAAGGGGTAGTCTCCGGATCATGGCAGTTGCTACTCTTGAATCCAGAAGTTTGGTTCAGAATGAGAATGCAAACATGGGTTACGACGGTTCAGAGCTGGGCAGGGAGTCCAGTCGCTGCGCAGGTCAGCTCGAGCCTTCCAGTGATGATTCCGAAGAACTGGATGATAGGGAGAAGTTAAGGCGATTGAGGATTTCTAATGCTAATAAAGGGAGCACGCCATGGAACAAAGGCCGAAAGCACAGTCCTGAAACCCTTCAGCTGATCAAAGAGAGAACAAGGCTTGCAATGCAGAATCCTAAGGTCAAAATGAAGTTGGTGAACCTTGGACATGCTCAAAGTGAAGAGACAAGAGTTAAAATCGGGCTTGGAGTGCGAATCGGGTGGCAAAAACGGCGTGAGAAACTATCATTGCAGGAAAATTGCTGCTATGACTGGCAGAACTTAATTGCTGAAGCCTCTAGACAAGGATACGACGGTGAAGAGGAACTGCAATGGGATATCTACAAGATCTTAGATGAAAAGCTTACAGAGGAGTATATAGAGAGGGTTGAGCAAAGGAAAATTATGCGTAGGCCAAAAGGAAGCAAGAGAGCACCCAAGTCTCTTGAGCAAAGAAGGAAGATTTCACAAGCAATCTCTGCAAAATGGAACGACCCTAATTATCGCGACCGTGTTTGCTCTGCCTTGGCTAAATATTATGATGCATCATATGGACCCGAAAGAAAGCCAACGAAGAAGCCAAGTGGTAGTACAGAGTCCACGAGAAGGGTACCTGCAAAGAAAAAGGTTAGTGAGAAAAACAGTTTCTCTAGTGGCGAGATTAAAATCCAAAAGCAACGACTGAGGTTGAGAAGTAACGCACCCATGTACAAGGATCCTCTCGCGAGTTCTAAGATGGAGATGATAAAGAATATCAGAGCACAAAGAGCAGCTGCTGAAACCAAAAAAACTGAAGCCGTAGAAAGAGCTAGGTTATTGATTGCGGAAGCTGAGAAGGCTGCTATGGCCCTTGAGGTTGCTGCAACAAAGAGCGCTGTTGCTCGAGCTTCCCTCGTTGAAACCCGACAGCTTATAGCTGAGGCAATTCAGTTCATTGAATCTGTTGAGACGGCAAAGATTTCTTCGTTCGAGAATGAGGACCCTTCAGTTGCATCAAATGAAGCGATTACTCAGGACGAAAAGGAAGCACATACTGGGGTTGAGGAACTGACAGAAGTAGACAGTGGAAGGGCAAATGGCATCCGAGCTTTGTCCCCCCATGAGAATGAAGACCCCATATTTGCATCATATGAAATGATTACTGAGGGTGAGGAAGAACCATGCACCACGGTTGCAGGTCAGACTGAAGCGGGTAATGTAAAGACAAATGGCACGAAAACCTTATCGAGTACAAACGAGGACTCCAGCTTTGGCAACTTCACATCGGAGTATATGGTAGATGCCGAAGAGGACCTTTCCCCATTGCAGGATATGCTTAACGTTCTCGAGGACCCTGCCCCGTTGGAGGATATGCTCAATAGTGAAGAGGACCTTCCCCGACTGAGCACCAGTGGCTATGGTTTGCCTCTTTTCGGTTTTGAGGAGCCAATAAAGCAATCGGATGTGAGAAATGAACCCACCCAGTTAGAACCAAATGGGGACGGTGTGTGCAGCAAGAACCTTCAACTAAATGGGACGGAAGTTCAATCCAAAGAAGAGGAAACGCCTTGCAAACCAGTGACCGGCGCTACTAAAAAGTGGATTCGTGGGAGGCTTGTTGAAGTAGGAGAAGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUMOD3

Protein Analysis

695

Amino Acids

77.62

Weight (kDa)

6.25

Isoelectric Point (pI)

51.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53800 AT1G53800 AT1G53800 AT1G53800
fragaria_vesca	FvH4_6g35990 FvH4_6g35990 FvH4_6g35990 FvH4_6g35990
malus_domestica	MD09G1172000.v1.1 MD17G1154900.v1.1
prunus_persica	Prupe.3G030400_v2.0.a1 Prupe.3G030400_v2.0.a1 Prupe.3G030400_v2.0.a1 Prupe.3G030400_v2.0.a1
pyrus_communis	pycom09g08940 pycom17g14770
rosa_chinensis	RchiOBHm_Chr2g0148111
rosa_laevigata	RLG00000020314
rosa_multiflora	Rmu_sc0001516.1_g000037 Rmu_sc0012028.1_g000009
rosa_roxburghii	Rroxscaffold_2G00099140
rosa_rugosa	Rorug02G0403500
rosa_samantha	Rh2AG461400 Rh2BG475200 Rh2CG448500 Rh2DG483800
rosa_wichuraiana	Rw2G037670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	424
Acc36I	ACCTGC	3 cut(s)	416, 1087, 1631
Acc65I	GGTACC	1 cut(s)	1075
AccB1I	GGYRCC	1 cut(s)	1075
AccI	GTMKAC	1 cut(s)	1524
AccII	CGCG	2 cut(s)	972, 1190
AccIII	TCCGGA	1 cut(s)	318
AciI	CCGC	2 cut(s)	1289, 1655
AclI	AACGTT	1 cut(s)	1785
AclWI	GGATC	4 cut(s)	49, 329, 1175, 1188
AcuI	CTGAAG	5 cut(s)	545, 777, 1278, 1434, 1671
AfaI	GTAC	6 cut(s)	110, 163, 1057, 1077, 1175, 1696
AfeI	AGCGCT	1 cut(s)	1339
AfiI	CCNNNNNNNGG	8 cut(s)	21, 188, 325, 1071, 1771, 1810, 1877, 2027
AjuI	GAANNNNNNNTTGG	2 cut(s)	269, 301
Alw21I	GWGCWC	4 cut(s)	521, 901, 1228, 1853
Alw26I	GTCTC	4 cut(s)	320, 644, 912, 1406
AlwI	GGATC	4 cut(s)	49, 329, 1175, 1188
AlwNI	CAGNNNCTG	2 cut(s)	420, 1241
Ama87I	CYCGRG	3 cut(s)	434, 1347, 1790
Aor13HI	TCCGGA	1 cut(s)	318
Aor51HI	AGCGCT	1 cut(s)	1339
AoxI	GGCC	3 cut(s)	535, 878, 1311
ApeKI	GCWGC	9 cut(s)	128, 131, 420, 729, 1235, 1238, 1304, 1325, 1956
ArsI	GACNNNNNNTTYG	6 cut(s)	532, 564, 1568, 1600, 1697, 1729
Asp700I	GAANNNNTTC	1 cut(s)	558
Asp718I	GGTACC	1 cut(s)	1075
AspLEI	GCGC	4 cut(s)	294, 425, 1340, 2033
AspS9I	GGNCC	6 cut(s)	1019, 1312, 1444, 1756, 1795, 1834
AsuHPI	GGTGA	4 cut(s)	76, 634, 794, 1625
AvaI	CYCGRG	3 cut(s)	434, 1347, 1790
AvaII	GGWCC	5 cut(s)	1019, 1444, 1756, 1795, 1834
AxyI	CCTNAGG	1 cut(s)	603
BaeI	ACNNNNGTAYC	2 cut(s)	766, 799
BamHI	GGATCC	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	1075
BanII	GRGCYC	1 cut(s)	175
BauI	CACGAG	1 cut(s)	1066
BbsI	GAAGAC	1 cut(s)	1581
Bbv12I	GWGCWC	4 cut(s)	521, 901, 1228, 1853
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	9 cut(s)	115, 118, 407, 716, 1225, 1247, 1291, 1312, 1968
BccI	CCATC	1 cut(s)	1195
BceAI	ACGGC	3 cut(s)	713, 1247, 1431
BcgI	CGANNNNNNTGC	2 cut(s)	1781, 1815
BciVI	GTATCC	1 cut(s)	767
BclI	TGATCA	1 cut(s)	567
BcoDI	GTCTC	4 cut(s)	320, 644, 912, 1406
BfaI	CTAG	3 cut(s)	765, 1116, 1275
BfoI	RGCGCY	2 cut(s)	1341, 2034
BfuAI	ACCTGC	3 cut(s)	416, 1087, 1631
BfuI	GTATCC	1 cut(s)	767
BglII	AGATCT	1 cut(s)	813
BisI	GCNGC	9 cut(s)	129, 132, 421, 730, 1236, 1239, 1305, 1326, 1957
BlsI	GCNGC	9 cut(s)	130, 133, 422, 731, 1237, 1240, 1306, 1327, 1958
Bme18I	GGWCC	5 cut(s)	1019, 1444, 1756, 1795, 1834
BmeT110I	CYCGRG	3 cut(s)	434, 1347, 1790
BmgT120I	GGNCC	6 cut(s)	1019, 1312, 1444, 1756, 1795, 1834
BmiI	GGNNCC	6 cut(s)	1021, 1077, 1182, 1446, 1797, 1890
BmrI	ACTGGG	2 cut(s)	1509, 1921
BmsI	GCATC	6 cut(s)	997, 1019, 1466, 1554, 1598, 1735
BmuI	ACTGGG	2 cut(s)	1509, 1921
BpiI	GAAGAC	1 cut(s)	1581
BplI	GAGNNNNNCTC	4 cut(s)	79, 111, 1341, 1373
BpmI	CTGGAG	1 cut(s)	1693
Bpu10I	CCTNAGC	1 cut(s)	1383
BpuEI	CTTGAG	2 cut(s)	932, 1337
BsaBI	GATNNNNATC	1 cut(s)	1130
BsaJI	CCNNGG	5 cut(s)	305, 524, 628, 990, 1632
BsaWI	WCCGGW	1 cut(s)	318
BsaXI	ACNNNNNCTCC	2 cut(s)	1691, 1721
Bsc4I	CCNNNNNNNGG	8 cut(s)	21, 188, 325, 1071, 1771, 1810, 1877, 2027
Bse118I	RCCGGY	1 cut(s)	2027
Bse1I	ACTGG	8 cut(s)	414, 444, 468, 743, 1504, 1854, 1927, 2021
Bse21I	CCTNAGG	1 cut(s)	603
Bse3DI	GCAATG	4 cut(s)	597, 713, 803, 1766
Bse8I	GATNNNNATC	1 cut(s)	1130
BseAI	TCCGGA	1 cut(s)	318
BseDI	CCNNGG	5 cut(s)	305, 524, 628, 990, 1632
BseGI	GGATG	3 cut(s)	472, 1545, 1912
BseJI	GATNNNNATC	1 cut(s)	1130
BseLI	CCNNNNNNNGG	8 cut(s)	21, 188, 325, 1071, 1771, 1810, 1877, 2027
BseMI	GCAATG	4 cut(s)	597, 713, 803, 1766
BseMII	CTCAG	7 cut(s)	181, 1139, 1287, 1374, 1490, 1599, 1838
BseNI	ACTGG	8 cut(s)	414, 444, 468, 743, 1504, 1854, 1927, 2021
BseRI	GAGGAG	2 cut(s)	851, 1901
BseXI	GCAGC	9 cut(s)	115, 118, 407, 716, 1225, 1247, 1291, 1312, 1968
BseYI	CCCAGC	1 cut(s)	400
BsgI	GTGCAG	2 cut(s)	117, 1975
Bsh1236I	CGCG	2 cut(s)	972, 1190
Bsh1285I	CGRYCG	1 cut(s)	976
BshFI	GGCC	3 cut(s)	537, 880, 1313
BshNI	GGYRCC	1 cut(s)	1075
BsiEI	CGRYCG	1 cut(s)	976
BsiHKAI	GWGCWC	4 cut(s)	521, 901, 1228, 1853
BsiHKCI	CYCGRG	3 cut(s)	434, 1347, 1790
BsiSI	CCGG	2 cut(s)	319, 2028
BslFI	GGGAC	4 cut(s)	287, 1543, 1958, 1993
BslI	CCNNNNNNNGG	8 cut(s)	21, 188, 325, 1071, 1771, 1810, 1877, 2027
BsmAI	GTCTC	4 cut(s)	320, 644, 912, 1406
BsmBI	CGTCTC	1 cut(s)	1406
BsmFI	GGGAC	4 cut(s)	287, 1543, 1958, 1993
BsmI	GAATGC	1 cut(s)	376
BsnI	GGCC	3 cut(s)	537, 880, 1313
BsoBI	CYCGRG	3 cut(s)	434, 1347, 1790
Bsp1286I	GDGCHC	5 cut(s)	175, 521, 901, 1228, 1853
Bsp13I	TCCGGA	1 cut(s)	318
Bsp1407I	TGTACA	1 cut(s)	1173
Bsp143I	GATC	5 cut(s)	54, 321, 567, 813, 1180
Bsp19I	CCATGG	1 cut(s)	524
Bsp68I	TCGCGA	2 cut(s)	972, 1190
BspACI	CCGC	2 cut(s)	1289, 1655
BspANI	GGCC	3 cut(s)	537, 880, 1313
BspCNI	CTCAG	7 cut(s)	180, 1140, 1288, 1375, 1489, 1600, 1839
BspEI	TCCGGA	1 cut(s)	318
BspFNI	CGCG	2 cut(s)	972, 1190
BspLI	GGNNCC	6 cut(s)	1021, 1077, 1182, 1446, 1797, 1890
BspMI	ACCTGC	3 cut(s)	416, 1087, 1631
BspPI	GGATC	4 cut(s)	49, 329, 1175, 1188
BspT107I	GGYRCC	1 cut(s)	1075
BsrDI	GCAATG	4 cut(s)	597, 713, 803, 1766
BsrFI	RCCGGY	1 cut(s)	2027
BsrGI	TGTACA	1 cut(s)	1173
BsrI	ACTGG	8 cut(s)	414, 444, 468, 743, 1504, 1854, 1927, 2021
BssAI	RCCGGY	1 cut(s)	2027
BssECI	CCNNGG	5 cut(s)	305, 524, 628, 990, 1632
BssMI	GATC	5 cut(s)	54, 321, 567, 813, 1180
BssSI	CACGAG	1 cut(s)	1066
BssT1I	CCWWGG	4 cut(s)	305, 524, 628, 990
Bst2BI	CACGAG	1 cut(s)	1066
Bst4CI	ACNGT	9 cut(s)	237, 392, 548, 782, 977, 1109, 1529, 1636, 1949
Bst6I	CTCTTC	5 cut(s)	642, 780, 1746, 1824, 1995
BstAPI	GCANNNNNTGC	4 cut(s)	125, 140, 944, 1777
BstAUI	TGTACA	1 cut(s)	1173
BstC8I	GCNNGC	3 cut(s)	141, 521, 588
BstDSI	CCRYGG	2 cut(s)	524, 1632
BstF5I	GGATG	3 cut(s)	472, 1545, 1912
BstFNI	CGCG	2 cut(s)	972, 1190
BstH2I	RGCGCY	2 cut(s)	1341, 2034
BstHHI	GCGC	4 cut(s)	294, 425, 1340, 2033
BstKTI	GATC	5 cut(s)	57, 324, 570, 816, 1183
BstMAI	GTCTC	4 cut(s)	320, 644, 912, 1406
BstMBI	GATC	5 cut(s)	54, 321, 567, 813, 1180
BstMCI	CGRYCG	1 cut(s)	976
BstNSI	RCATGY	1 cut(s)	638
BstUI	CGCG	2 cut(s)	972, 1190
BstV1I	GCAGC	9 cut(s)	115, 118, 407, 716, 1225, 1247, 1291, 1312, 1968
BstV2I	GAAGAC	1 cut(s)	1581
BstX2I	RGATCY	2 cut(s)	813, 1180
BstXI	CCANNNNNNTGG	1 cut(s)	355
BstYI	RGATCY	2 cut(s)	813, 1180
Bsu36I	CCTNAGG	1 cut(s)	603
BsuI	GTATCC	1 cut(s)	767
BsuRI	GGCC	3 cut(s)	537, 880, 1313
BtgI	CCRYGG	2 cut(s)	524, 1632
BtsCI	GGATG	3 cut(s)	472, 1545, 1912
BtsIMutI	CAGTG	4 cut(s)	451, 1534, 1861, 2028
BtuMI	TCGCGA	2 cut(s)	972, 1190
BveI	ACCTGC	3 cut(s)	416, 1087, 1631
Cac8I	GCNNGC	3 cut(s)	141, 521, 588
CaiI	CAGNNNCTG	2 cut(s)	420, 1241
CfoI	GCGC	4 cut(s)	294, 425, 1340, 2033
Cfr10I	RCCGGY	1 cut(s)	2027
Cfr13I	GGNCC	6 cut(s)	1019, 1312, 1444, 1756, 1795, 1834
Csp6I	GTAC	6 cut(s)	109, 162, 1056, 1076, 1174, 1695
CviAII	CATG	8 cut(s)	11, 325, 379, 525, 635, 1171, 1565, 1626
CviQI	GTAC	6 cut(s)	109, 162, 1056, 1076, 1174, 1695
DpnI	GATC	5 cut(s)	56, 323, 569, 815, 1182
DpnII	GATC	5 cut(s)	54, 321, 567, 813, 1180
Eam1104I	CTCTTC	5 cut(s)	642, 780, 1746, 1824, 1995
EarI	CTCTTC	5 cut(s)	642, 780, 1746, 1824, 1995
Eco130I	CCWWGG	4 cut(s)	305, 524, 628, 990
Eco24I	GRGCYC	1 cut(s)	175
Eco32I	GATATC	2 cut(s)	93, 805
Eco47I	GGWCC	5 cut(s)	1019, 1444, 1756, 1795, 1834
Eco47III	AGCGCT	1 cut(s)	1339
Eco57I	CTGAAG	5 cut(s)	545, 777, 1278, 1434, 1671
Eco81I	CCTNAGG	1 cut(s)	603
Eco88I	CYCGRG	3 cut(s)	434, 1347, 1790
EcoO109I	RGGNCCY	4 cut(s)	1444, 1756, 1795, 1834
EcoRV	GATATC	2 cut(s)	93, 805
EcoT14I	CCWWGG	4 cut(s)	305, 524, 628, 990
EcoT22I	ATGCAT	1 cut(s)	1012
EcoT38I	GRGCYC	1 cut(s)	175
ErhI	CCWWGG	4 cut(s)	305, 524, 628, 990
Esp3I	CGTCTC	1 cut(s)	1406
FaeI	CATG	8 cut(s)	14, 328, 382, 528, 638, 1174, 1568, 1629
FalI	AAGNNNNNCTT	4 cut(s)	1743, 1775, 1821, 1853
FaqI	GGGAC	4 cut(s)	287, 1543, 1958, 1993
FatI	CATG	8 cut(s)	10, 324, 378, 524, 634, 1170, 1564, 1625
FauI	CCCGC	1 cut(s)	1648
FauNDI	CATATG	2 cut(s)	1015, 1594
FbaI	TGATCA	1 cut(s)	567
FblI	GTMKAC	1 cut(s)	1524
Fnu4HI	GCNGC	9 cut(s)	129, 132, 421, 730, 1236, 1239, 1305, 1326, 1957
FokI	GGATG	3 cut(s)	479, 1532, 1919
FriOI	GRGCYC	1 cut(s)	175
Fsp4HI	GCNGC	9 cut(s)	129, 132, 421, 730, 1236, 1239, 1305, 1326, 1957
FspBI	CTAG	3 cut(s)	765, 1116, 1275
FspI	TGCGCA	1 cut(s)	424
GlaI	GCGC	4 cut(s)	293, 424, 1339, 2032
GluI	GCNGC	9 cut(s)	129, 132, 421, 730, 1236, 1239, 1305, 1326, 1957
GsaI	CCCAGC	1 cut(s)	404
GsuI	CTGGAG	1 cut(s)	1693
HaeII	RGCGCY	2 cut(s)	1341, 2034
HaeIII	GGCC	3 cut(s)	537, 880, 1313
HapII	CCGG	2 cut(s)	319, 2028
HhaI	GCGC	4 cut(s)	294, 425, 1340, 2033
Hin1II	CATG	8 cut(s)	14, 328, 382, 528, 638, 1174, 1568, 1629
Hin6I	GCGC	4 cut(s)	292, 423, 1338, 2031
HinP1I	GCGC	4 cut(s)	292, 423, 1338, 2031
HindIII	AAGCTT	3 cut(s)	81, 827, 2079
HinfI	GANTC	9 cut(s)	344, 410, 452, 598, 681, 1061, 1403, 1706, 2047
HpaII	CCGG	2 cut(s)	319, 2028
HphI	GGTGA	4 cut(s)	76, 634, 794, 1625
Hpy166II	GTNNAC	4 cut(s)	164, 625, 1065, 1525
Hpy188I	TCNGA	8 cut(s)	363, 397, 457, 1223, 1550, 1647, 1732, 1906
Hpy8I	GTNNAC	4 cut(s)	164, 625, 1065, 1525
Hpy99I	CGWCG	2 cut(s)	392, 782
HpyCH4III	ACNGT	9 cut(s)	237, 392, 548, 782, 977, 1109, 1529, 1636, 1949
HpyCH4IV	ACGT	2 cut(s)	300, 1785
HpySE526I	ACGT	2 cut(s)	300, 1785
Hsp92II	CATG	8 cut(s)	14, 328, 382, 528, 638, 1174, 1568, 1629
HspAI	GCGC	4 cut(s)	292, 423, 1338, 2031
Kpn2I	TCCGGA	1 cut(s)	318
KpnI	GGTACC	1 cut(s)	1079
Ksp22I	TGATCA	1 cut(s)	567
Kzo9I	GATC	5 cut(s)	54, 321, 567, 813, 1180
LmnI	GCTCC	2 cut(s)	516, 1888
Lsp1109I	GCAGC	9 cut(s)	115, 118, 407, 716, 1225, 1247, 1291, 1312, 1968
LweI	GCATC	6 cut(s)	997, 1019, 1466, 1554, 1598, 1735
MaeI	CTAG	3 cut(s)	765, 1116, 1275
MaeII	ACGT	2 cut(s)	300, 1785
MaeIII	GTNAC	3 cut(s)	383, 1160, 2023
MalI	GATC	5 cut(s)	56, 323, 569, 815, 1182
MboI	GATC	5 cut(s)	54, 321, 567, 813, 1180
MflI	RGATCY	2 cut(s)	813, 1180
MhlI	GDGCHC	5 cut(s)	175, 521, 901, 1228, 1853
MluCI	AATT	9 cut(s)	39, 69, 198, 272, 724, 750, 867, 964, 1389
MlyI	GAGTC	3 cut(s)	419, 1070, 1700
MmeI	TCCRAC	1 cut(s)	1788
Mph1103I	ATGCAT	1 cut(s)	1012
MroI	TCCGGA	1 cut(s)	318
MroXI	GAANNNNTTC	1 cut(s)	558
MseI	TTAA	7 cut(s)	297, 482, 660, 749, 1128, 1782, 2083
MslI	CAYNNNNRTG	1 cut(s)	1569
MspA1I	CMGCKG	2 cut(s)	565, 1238
MspI	CCGG	2 cut(s)	319, 2028
Mva1269I	GAATGC	1 cut(s)	376
MvnI	CGCG	2 cut(s)	972, 1190
NcoI	CCATGG	1 cut(s)	524
NdeI	CATATG	2 cut(s)	1015, 1594
NdeII	GATC	5 cut(s)	54, 321, 567, 813, 1180
NlaIII	CATG	8 cut(s)	14, 328, 382, 528, 638, 1174, 1568, 1629
NlaIV	GGNNCC	6 cut(s)	1021, 1077, 1182, 1446, 1797, 1890
NmuCI	GTSAC	1 cut(s)	2023
NruI	TCGCGA	2 cut(s)	972, 1190
NsbI	TGCGCA	1 cut(s)	424
NsiI	ATGCAT	1 cut(s)	1012
NspI	RCATGY	1 cut(s)	638
PaeR7I	CTCGAG	3 cut(s)	434, 1347, 1790
PctI	GAATGC	1 cut(s)	376
PdmI	GAANNNNTTC	1 cut(s)	558
PfeI	GAWTC	6 cut(s)	344, 452, 598, 681, 1403, 2047
PkrI	GCNGC	9 cut(s)	130, 133, 422, 731, 1237, 1240, 1306, 1327, 1958
PleI	GAGTC	3 cut(s)	418, 1069, 1700
PpsI	GAGTC	3 cut(s)	418, 1069, 1700
PpuMI	RGGWCCY	4 cut(s)	1444, 1756, 1795, 1834
Psp1406I	AACGTT	1 cut(s)	1785
Psp5II	RGGWCCY	4 cut(s)	1444, 1756, 1795, 1834
PspFI	CCCAGC	1 cut(s)	400
PspN4I	GGNNCC	6 cut(s)	1021, 1077, 1182, 1446, 1797, 1890
PspPI	GGNCC	6 cut(s)	1019, 1312, 1444, 1756, 1795, 1834
PspPPI	RGGWCCY	4 cut(s)	1444, 1756, 1795, 1834
PspXI	VCTCGAGB	2 cut(s)	434, 1347
PstNI	CAGNNNCTG	2 cut(s)	420, 1241
PsuI	RGATCY	2 cut(s)	813, 1180
PvuII	CAGCTG	2 cut(s)	565, 1238
RruI	TCGCGA	2 cut(s)	972, 1190
RsaI	GTAC	6 cut(s)	110, 163, 1057, 1077, 1175, 1696
RsaNI	GTAC	6 cut(s)	109, 162, 1056, 1076, 1174, 1695
RseI	CAYNNNNRTG	1 cut(s)	1569
SaqAI	TTAA	7 cut(s)	297, 482, 660, 749, 1128, 1782, 2083
SatI	GCNGC	9 cut(s)	129, 132, 421, 730, 1236, 1239, 1305, 1326, 1957
Sau3AI	GATC	5 cut(s)	54, 321, 567, 813, 1180
Sau96I	GGNCC	6 cut(s)	1019, 1312, 1444, 1756, 1795, 1834
SchI	GAGTC	3 cut(s)	419, 1070, 1700
SduI	GDGCHC	5 cut(s)	175, 521, 901, 1228, 1853
SfaNI	GCATC	6 cut(s)	997, 1019, 1466, 1554, 1598, 1735
Sfr274I	CTCGAG	3 cut(s)	434, 1347, 1790
SinI	GGWCC	5 cut(s)	1019, 1444, 1756, 1795, 1834
SlaI	CTCGAG	3 cut(s)	434, 1347, 1790
SmiMI	CAYNNNNRTG	1 cut(s)	1569
SmlI	CTYRAG	5 cut(s)	434, 911, 1316, 1347, 1790
SmoI	CTYRAG	5 cut(s)	434, 911, 1316, 1347, 1790
Sse9I	AATT	9 cut(s)	39, 69, 198, 272, 724, 750, 867, 964, 1389
SsiI	CCGC	2 cut(s)	1289, 1655
SspI	AATATT	1 cut(s)	1001
SspMI	CTAG	3 cut(s)	765, 1116, 1275
StyI	CCWWGG	4 cut(s)	305, 524, 628, 990
TaaI	ACNGT	9 cut(s)	237, 392, 548, 782, 977, 1109, 1529, 1636, 1949
TaiI	ACGT	2 cut(s)	303, 1788
TaqI	TCGA	7 cut(s)	26, 37, 435, 1348, 1434, 1691, 1791
TasI	AATT	9 cut(s)	39, 69, 198, 272, 724, 750, 867, 964, 1389
TatI	WGTACW	4 cut(s)	108, 1055, 1173, 1694
TfiI	GAWTC	6 cut(s)	344, 452, 598, 681, 1403, 2047
Tru1I	TTAA	7 cut(s)	297, 482, 660, 749, 1128, 1782, 2083
Tru9I	TTAA	7 cut(s)	297, 482, 660, 749, 1128, 1782, 2083
TscAI	CASTG	4 cut(s)	451, 1534, 1861, 2028
TseFI	GTSAC	1 cut(s)	2023
TseI	GCWGC	9 cut(s)	128, 131, 420, 729, 1235, 1238, 1304, 1325, 1956
Tsp45I	GTSAC	1 cut(s)	2023
TspDTI	ATGAA	7 cut(s)	629, 837, 1387, 1479, 1587, 1611, 1932
TspGWI	ACGGA	1 cut(s)	1997
TspRI	CASTG	4 cut(s)	451, 1534, 1861, 2028
VpaK11BI	GGWCC	5 cut(s)	1019, 1444, 1756, 1795, 1834
XbaI	TCTAGA	1 cut(s)	764
XceI	RCATGY	1 cut(s)	638
XhoI	CTCGAG	3 cut(s)	434, 1347, 1790
XmiI	GTMKAC	1 cut(s)	1524
XmnI	GAANNNNTTC	1 cut(s)	558
XspI	CTAG	3 cut(s)	765, 1116, 1275
Zsp2I	ATGCAT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.