RchiOBHm_Chr2g0148111

NUMOD3 motif (2 copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0006219
Physical Location & Seq
Forward (+)
65754879 .. 65759859
4981 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51769

Sequence Viewer

Length: 1998 bp
ATGCCTTCACTAGAGATTGCTGTTGCTCAGCCTGGCTTCCAAAACCATCTATGTACCCTCAGGGCTCAAACCTCTCTCCATAGTAAAGTAATTTCAAGTCCATTCACCTTTGGAATTGACAAGAAACTGTCCTCATGGTATAAATCCTCGGACATGGCTAAAAAGTCATACTTCAACTTGGGGAACATTAAGACCCCAAGGAGTAGACTAGTGATCCAAGCAGTTGCTACTTTTGAAGCAAAAACTCTTGTTCATAATGAGAATGGACACTTGGGTTACACCAGTTCAGAGCTGAATAAGGATTCGAGTCCCTTTCAGCGAGAGTCTTCAAGTGATGATTCCTCAGAAATGGATGAGAAAGAGAAGTTAAGGCGATTGAGGATTTCTAAAGCAAATAAAGGGAACACACCATGGAACAAAGGAAGAAAGCATAGTCCTGAAACCCTTCAGCTGATCAAAGAAAGAACAAGGCTTGCAATGCAGGATCCTAAGGTCAAAATGAAGTTGGTTAACCTTGGACATGCTCAAACGGAGGAGACAAGAACAAAAATTGGGATTGGAGTCCGGATGGGGTGGGAAAGACGGCGGCAAAAGCTATCATTGCAGGAAAATTGCTGTTATGAATGGCAGAACTTAATTGCTGAAGCCTCTAGACGAGGTTATGATGGTGAGGAGGAGTTGCAATGGGATTCCTACAAGATCTTAGATGGAAAGCTTAAAGAGGAGTATCTAGAGAGTATAGAACAAAGGAAAATAATGCGCAGGCCAAAAGGAAGCAAGAGAGCACCCAAATCTCTTGAGCAAAGGAGGAAGATCTCACAAGCAATCTCAGCAAAATGGAACGATCCGGAGTACCGTGACCGGGTTTGCTCTGCCTTGTCTAAATATTATGATGCGTCCTATGGAAATGAAAGAAAGCCAAGAAAAAGGTCACCACGTAATACTGAGTCCCCAAGGAGCCCTACAAAGAAAAAGGTTTTTGAAGAAAAAAAAATTTCAAAGAATGAGATTAAACTCCAGAAACTGAAGTTGAGGAGAAGTAAAGGACCCATGTATAAGGATCCTCTGGCAAGTTCTAAGATGGAGATGATAAAGAACATCAGAGCACAAAGAGCAGCTACTGAAACCAAGAAAACTGAAGCCATAGAACGAGCTAGGCTATTGATTGCTGAAGCTGAGAAGGCTGCCATGGCTCTTGAGGCTTCTGCAACTAAGAGCCCTGTTGCTCGAGCTTCCCTCATTGAAACGCGACAGCTTATAGCGGAGGCAATTCGGTCAATTGAATCTATAGACACGATGCAGATCTCTTCACATGAGAATGAAGAGCCTTCAGTTGCATCAAATGAAGTGATTAGCCAGAGTGAGAAGGAAAACTGGTTTTGGGGTCTGACTGATGCAGATGATGCAAAGGTAAATGGTACCCTAACCTTTTCATCCCATGGGAATGAAAAGCCTTCAGTCCCACCAAATGAAGTGATTAGCCAAGATGAGAAGGAAGCTGGGATTTGGGGTTTGACTGAAGCAGATAATGGAAAGGTGGTGAATGGCACCCAGACCTTTTCCATCAACGATAATGAAGACCCCTTATTTGCATCGATTGAAGTGCTTAGTCAGATGGAGAAGGAAACATATACAGGGTCTGGTGGTCCGACTGAAGCATACAATGGAAAAGTAAATGGCACCCCAACCTTATTGTCAATTATAGACGAGGACCTTGGCTTTGACGAGTTCACCTTGCAGGATATGCCAAGTGATGAAGATGAGCTTCCCCCAATGAGCTCTGACAGTGATGCTTTGCCTCCGTCTAGTTCGGAGCAATCGGATTCAAGCATTCAATCAGACGAATTAGACCCAAATGAGAACGATGAATGCTACAAGAATCTTCAACTCAATGGGACCAAAGTTGAATCCCAAGAAGATGAAACACCTTCAACACCGGCTACTGTAACTAAAAAGTGGGTTCGAGGGAGGCTCATTGAAGTTCCTGAAGAAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUMOD3

Protein Analysis

665

Amino Acids

75.03

Weight (kDa)

6.38

Isoelectric Point (pI)

60.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NUMOD3 PF07460 125 - 152 2.2e-08 NUMOD3 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 761
Acc65I GGTACC 1 cut(s) 1418
AccB1I GGYRCC 3 cut(s) 1418, 1547, 1679
AccI GTMKAC 1 cut(s) 205
AccII CGCG 1 cut(s) 1249
AccIII TCCGGA 2 cut(s) 564, 847
AciI CCGC 2 cut(s) 586, 1262
AclWI GGATC 6 cut(s) 208, 479, 492, 839, 1055, 1068
AcsI RAATTY 1 cut(s) 993
AcuI CTGAAG 9 cut(s) 431, 663, 1046, 1158, 1191, 1314, 1440, 1539, 1674
AfaI GTAC 3 cut(s) 55, 854, 1420
AfiI CCNNNNNNNGG 1 cut(s) 862
AhlI ACTAGT 1 cut(s) 208
AjnI CCWGG 1 cut(s) 31
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
Alw21I GWGCWC 3 cut(s) 787, 1108, 1781
Alw26I GTCTC 1 cut(s) 530
AlwI GGATC 6 cut(s) 208, 479, 492, 839, 1055, 1068
AlwNI CAGNNNCTG 3 cut(s) 1024, 1121, 1640
Ama87I CYCGRG 1 cut(s) 1227
Aor13HI TCCGGA 2 cut(s) 564, 847
AoxI GGCC 1 cut(s) 764
ApeKI GCWGC 2 cut(s) 1115, 1184
ApoI RAATTY 1 cut(s) 993
ArsI GACNNNNNNTTYG 4 cut(s) 1571, 1603, 1703, 1735
Asp700I GAANNNNTTC 1 cut(s) 444
Asp718I GGTACC 1 cut(s) 1418
AspLEI GCGC 1 cut(s) 762
AspS9I GGNCC 4 cut(s) 1046, 1646, 1711, 1896
AsuC2I CCSGG 1 cut(s) 863
AsuHPI GGTGA 5 cut(s) 97, 680, 924, 1552, 1723
AvaI CYCGRG 1 cut(s) 1227
AvaII GGWCC 4 cut(s) 1046, 1646, 1711, 1896
AxyI CCTNAGG 2 cut(s) 59, 489
BamHI GGATCC 2 cut(s) 484, 1060
BanI GGYRCC 3 cut(s) 1418, 1547, 1679
BanII GRGCYC 4 cut(s) 67, 962, 1220, 1781
BbsI GAAGAC 2 cut(s) 318, 1584
Bbv12I GWGCWC 3 cut(s) 787, 1108, 1781
BbvI GCAGC 2 cut(s) 1127, 1171
BccI CCATC 7 cut(s) 54, 562, 659, 701, 1075, 1571, 1609
BceAI ACGGC 1 cut(s) 599
BcgI CGANNNNNNTGC 2 cut(s) 1585, 1619
BciT130I CCWGG 1 cut(s) 33
BclI TGATCA 1 cut(s) 453
BcnI CCSGG 1 cut(s) 863
BcoDI GTCTC 1 cut(s) 530
BcuI ACTAGT 1 cut(s) 208
BfaI CTAG 6 cut(s) 11, 209, 651, 731, 1155, 1806
BfmI CTRYAG 1 cut(s) 1287
BglII AGATCT 3 cut(s) 699, 813, 1302
BisI GCNGC 3 cut(s) 587, 1116, 1185
BlpI GCTNAGC 1 cut(s) 27
BlsI GCNGC 3 cut(s) 588, 1117, 1186
Bme1390I CCNGG 2 cut(s) 33, 863
Bme18I GGWCC 4 cut(s) 1046, 1646, 1711, 1896
BmeT110I CYCGRG 1 cut(s) 1227
BmgT120I GGNCC 4 cut(s) 1046, 1646, 1711, 1896
BmiI GGNNCC 8 cut(s) 486, 959, 1048, 1062, 1420, 1549, 1681, 1897
BmrFI CCNGG 2 cut(s) 33, 863
BmsI GCATC 7 cut(s) 883, 1287, 1346, 1384, 1393, 1601, 1780
BpiI GAAGAC 2 cut(s) 318, 1584
BplI GAGNNNNNCTC 4 cut(s) 1221, 1253, 1956, 1988
BpmI CTGGAG 1 cut(s) 1001
Bpu1102I GCTNAGC 1 cut(s) 27
BpuEI CTTGAG 2 cut(s) 818, 1217
BpuMI CCSGG 1 cut(s) 863
Bsa29I ATCGAT 1 cut(s) 1595
BsaAI YACGTR 1 cut(s) 938
BsaBI GATNNNNATC 1 cut(s) 1301
BsaJI CCNNGG 8 cut(s) 147, 197, 410, 514, 953, 1188, 1438, 1714
BsaWI WCCGGW 2 cut(s) 564, 847
Bsc4I CCNNNNNNNGG 1 cut(s) 862
Bse118I RCCGGY 1 cut(s) 1936
Bse1I ACTGG 2 cut(s) 282, 1379
Bse21I CCTNAGG 2 cut(s) 59, 489
Bse3DI GCAATG 3 cut(s) 483, 599, 689
Bse8I GATNNNNATC 1 cut(s) 1301
BseAI TCCGGA 2 cut(s) 564, 847
BseBI CCWGG 1 cut(s) 33
BseCI ATCGAT 1 cut(s) 1595
BseDI CCNNGG 8 cut(s) 147, 197, 410, 514, 953, 1188, 1438, 1714
BseGI GGATG 3 cut(s) 358, 573, 1433
BseJI GATNNNNATC 1 cut(s) 1301
BseLI CCNNNNNNNGG 1 cut(s) 862
BseMI GCAATG 3 cut(s) 483, 599, 689
BseMII CTCAG 6 cut(s) 41, 73, 357, 843, 936, 1167
BseNI ACTGG 2 cut(s) 282, 1379
BseRI GAGGAG 5 cut(s) 548, 686, 689, 737, 1048
BseXI GCAGC 2 cut(s) 1127, 1171
BseYI CCCAGC 1 cut(s) 1499
Bsh1236I CGCG 1 cut(s) 1249
BshFI GGCC 1 cut(s) 766
BshNI GGYRCC 3 cut(s) 1418, 1547, 1679
BshVI ATCGAT 1 cut(s) 1595
BsiHKAI GWGCWC 3 cut(s) 787, 1108, 1781
BsiHKCI CYCGRG 1 cut(s) 1227
BsiSI CCGG 4 cut(s) 565, 848, 862, 1937
BslFI GGGAC 4 cut(s) 294, 934, 1445, 1909
BslI CCNNNNNNNGG 1 cut(s) 862
BsmAI GTCTC 1 cut(s) 530
BsmFI GGGAC 4 cut(s) 294, 934, 1445, 1909
BsmI GAATGC 2 cut(s) 1830, 1874
BsnI GGCC 1 cut(s) 766
BsoBI CYCGRG 1 cut(s) 1227
Bsp1286I GDGCHC 6 cut(s) 67, 787, 962, 1108, 1220, 1781
Bsp13I TCCGGA 2 cut(s) 564, 847
Bsp143I GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
Bsp1720I GCTNAGC 1 cut(s) 27
Bsp19I CCATGG 3 cut(s) 410, 1188, 1438
BspACI CCGC 2 cut(s) 586, 1262
BspANI GGCC 1 cut(s) 766
BspCNI CTCAG 6 cut(s) 40, 72, 356, 842, 937, 1168
BspDI ATCGAT 1 cut(s) 1595
BspEI TCCGGA 2 cut(s) 564, 847
BspFNI CGCG 1 cut(s) 1249
BspLI GGNNCC 8 cut(s) 486, 959, 1048, 1062, 1420, 1549, 1681, 1897
BspPI GGATC 6 cut(s) 208, 479, 492, 839, 1055, 1068
BspQI GCTCTTC 1 cut(s) 1317
BspT107I GGYRCC 3 cut(s) 1418, 1547, 1679
BsrDI GCAATG 3 cut(s) 483, 599, 689
BsrFI RCCGGY 1 cut(s) 1936
BsrI ACTGG 2 cut(s) 282, 1379
BssAI RCCGGY 1 cut(s) 1936
BssECI CCNNGG 8 cut(s) 147, 197, 410, 514, 953, 1188, 1438, 1714
BssMI GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
BssT1I CCWWGG 7 cut(s) 197, 410, 514, 953, 1188, 1438, 1714
Bst2UI CCWGG 1 cut(s) 33
Bst4CI ACNGT 4 cut(s) 129, 857, 1787, 1945
Bst6I CTCTTC 2 cut(s) 1312, 1317
BstAPI GCANNNNNTGC 2 cut(s) 1403, 1744
BstBAI YACGTR 1 cut(s) 938
BstC8I GCNNGC 2 cut(s) 474, 764
BstDSI CCRYGG 3 cut(s) 410, 1188, 1438
BstEII GGTNACC 1 cut(s) 930
BstF5I GGATG 3 cut(s) 358, 573, 1433
BstFNI CGCG 1 cut(s) 1249
BstHHI GCGC 1 cut(s) 762
BstKTI GATC 8 cut(s) 216, 456, 487, 702, 816, 847, 1063, 1305
BstMAI GTCTC 1 cut(s) 530
BstMBI GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
BstNI CCWGG 1 cut(s) 33
BstNSI RCATGY 1 cut(s) 524
BstPI GGTNACC 1 cut(s) 930
BstSCI CCNGG 2 cut(s) 31, 861
BstSFI CTRYAG 1 cut(s) 1287
BstUI CGCG 1 cut(s) 1249
BstV1I GCAGC 2 cut(s) 1127, 1171
BstV2I GAAGAC 2 cut(s) 318, 1584
BstX2I RGATCY 5 cut(s) 484, 699, 813, 1060, 1302
BstYI RGATCY 5 cut(s) 484, 699, 813, 1060, 1302
Bsu15I ATCGAT 1 cut(s) 1595
Bsu36I CCTNAGG 2 cut(s) 59, 489
BsuRI GGCC 1 cut(s) 766
BsuTUI ATCGAT 1 cut(s) 1595
BtgI CCRYGG 3 cut(s) 410, 1188, 1438
BtsCI GGATG 3 cut(s) 358, 573, 1433
BtsIMutI CAGTG 1 cut(s) 1792
Cac8I GCNNGC 2 cut(s) 474, 764
CaiI CAGNNNCTG 3 cut(s) 1024, 1121, 1640
CfoI GCGC 1 cut(s) 762
Cfr10I RCCGGY 1 cut(s) 1936
Cfr13I GGNCC 4 cut(s) 1046, 1646, 1711, 1896
ClaI ATCGAT 1 cut(s) 1595
CseI GACGC 1 cut(s) 885
Csp6I GTAC 3 cut(s) 54, 853, 1419
CviAII CATG 8 cut(s) 135, 154, 411, 521, 1051, 1189, 1313, 1439
CviQI GTAC 3 cut(s) 54, 853, 1419
DpnI GATC 8 cut(s) 215, 455, 486, 701, 815, 846, 1062, 1304
DpnII GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
Eam1104I CTCTTC 2 cut(s) 1312, 1317
EarI CTCTTC 2 cut(s) 1312, 1317
Ecl136II GAGCTC 1 cut(s) 1779
Eco130I CCWWGG 7 cut(s) 197, 410, 514, 953, 1188, 1438, 1714
Eco24I GRGCYC 4 cut(s) 67, 962, 1220, 1781
Eco47I GGWCC 4 cut(s) 1046, 1646, 1711, 1896
Eco53kI GAGCTC 1 cut(s) 1779
Eco57I CTGAAG 9 cut(s) 431, 663, 1046, 1158, 1191, 1314, 1440, 1539, 1674
Eco81I CCTNAGG 2 cut(s) 59, 489
Eco88I CYCGRG 1 cut(s) 1227
Eco91I GGTNACC 1 cut(s) 930
EcoICRI GAGCTC 1 cut(s) 1779
EcoO109I RGGNCCY 2 cut(s) 1046, 1711
EcoO65I GGTNACC 1 cut(s) 930
EcoRII CCWGG 1 cut(s) 31
EcoT14I CCWWGG 7 cut(s) 197, 410, 514, 953, 1188, 1438, 1714
EcoT38I GRGCYC 4 cut(s) 67, 962, 1220, 1781
ErhI CCWWGG 7 cut(s) 197, 410, 514, 953, 1188, 1438, 1714
FaeI CATG 8 cut(s) 138, 157, 414, 524, 1054, 1192, 1316, 1442
FalI AAGNNNNNCTT 4 cut(s) 155, 187, 1749, 1781
FaqI GGGAC 4 cut(s) 294, 934, 1445, 1909
FatI CATG 8 cut(s) 134, 153, 410, 520, 1050, 1188, 1312, 1438
FbaI TGATCA 1 cut(s) 453
FblI GTMKAC 1 cut(s) 205
Fnu4HI GCNGC 3 cut(s) 587, 1116, 1185
FokI GGATG 3 cut(s) 365, 580, 1420
FriOI GRGCYC 4 cut(s) 67, 962, 1220, 1781
Fsp4HI GCNGC 3 cut(s) 587, 1116, 1185
FspBI CTAG 6 cut(s) 11, 209, 651, 731, 1155, 1806
FspI TGCGCA 1 cut(s) 761
GlaI GCGC 1 cut(s) 761
GluI GCNGC 3 cut(s) 587, 1116, 1185
GsaI CCCAGC 1 cut(s) 1503
GsuI CTGGAG 1 cut(s) 1001
HaeIII GGCC 1 cut(s) 766
HapII CCGG 4 cut(s) 565, 848, 862, 1937
HgaI GACGC 1 cut(s) 885
HhaI GCGC 1 cut(s) 762
Hin1II CATG 8 cut(s) 138, 157, 414, 524, 1054, 1192, 1316, 1442
Hin6I GCGC 1 cut(s) 760
HinP1I GCGC 1 cut(s) 760
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HindIII AAGCTT 2 cut(s) 713, 1992
HpaI GTTAAC 1 cut(s) 511
HpaII CCGG 4 cut(s) 565, 848, 862, 1937
HphI GGTGA 5 cut(s) 97, 680, 924, 1552, 1723
Hpy166II GTNNAC 3 cut(s) 206, 511, 1731
Hpy188III TCNNGA 9 cut(s) 437, 565, 651, 731, 797, 848, 1018, 1196, 1985
Hpy8I GTNNAC 3 cut(s) 206, 511, 1731
HpyAV CCTTC 9 cut(s) 15, 455, 1174, 1338, 1360, 1464, 1486, 1615, 1938
HpyCH4III ACNGT 4 cut(s) 129, 857, 1787, 1945
HpyCH4IV ACGT 1 cut(s) 937
HpySE526I ACGT 1 cut(s) 937
Hsp92II CATG 8 cut(s) 138, 157, 414, 524, 1054, 1192, 1316, 1442
HspAI GCGC 1 cut(s) 760
Kpn2I TCCGGA 2 cut(s) 564, 847
KpnI GGTACC 1 cut(s) 1422
Ksp22I TGATCA 1 cut(s) 453
KspAI GTTAAC 1 cut(s) 511
Kzo9I GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
LguI GCTCTTC 1 cut(s) 1317
LmnI GCTCC 2 cut(s) 957, 1813
Lsp1109I GCAGC 2 cut(s) 1127, 1171
LweI GCATC 7 cut(s) 883, 1287, 1346, 1384, 1393, 1601, 1780
MaeI CTAG 6 cut(s) 11, 209, 651, 731, 1155, 1806
MaeII ACGT 1 cut(s) 937
MaeIII GTNAC 4 cut(s) 275, 857, 930, 1945
MalI GATC 8 cut(s) 215, 455, 486, 701, 815, 846, 1062, 1304
MboI GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
MfeI CAATTG 1 cut(s) 1278
MflI RGATCY 5 cut(s) 484, 699, 813, 1060, 1302
MhlI GDGCHC 6 cut(s) 67, 787, 962, 1108, 1220, 1781
MlyI GAGTC 4 cut(s) 316, 332, 570, 956
MmeI TCCRAC 1 cut(s) 1673
MroI TCCGGA 2 cut(s) 564, 847
MroXI GAANNNNTTC 1 cut(s) 444
MseI TTAA 6 cut(s) 189, 368, 510, 635, 717, 1011
MslI CAYNNNNRTG 2 cut(s) 1317, 1443
MspA1I CMGCKG 1 cut(s) 451
MspI CCGG 4 cut(s) 565, 848, 862, 1937
MspR9I CCNGG 2 cut(s) 33, 863
MunI CAATTG 1 cut(s) 1278
Mva1269I GAATGC 2 cut(s) 1830, 1874
MvaI CCWGG 1 cut(s) 33
MvnI CGCG 1 cut(s) 1249
NciI CCSGG 1 cut(s) 863
NcoI CCATGG 3 cut(s) 410, 1188, 1438
NdeII GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
NlaIII CATG 8 cut(s) 138, 157, 414, 524, 1054, 1192, 1316, 1442
NlaIV GGNNCC 8 cut(s) 486, 959, 1048, 1062, 1420, 1549, 1681, 1897
NmuCI GTSAC 2 cut(s) 857, 930
NsbI TGCGCA 1 cut(s) 761
NspI RCATGY 1 cut(s) 524
PaeR7I CTCGAG 1 cut(s) 1227
PciSI GCTCTTC 1 cut(s) 1317
PctI GAATGC 2 cut(s) 1830, 1874
PdmI GAANNNNTTC 1 cut(s) 444
PfeI GAWTC 7 cut(s) 302, 338, 689, 1283, 1823, 1879, 1907
PkrI GCNGC 3 cut(s) 588, 1117, 1186
PleI GAGTC 4 cut(s) 315, 331, 569, 955
PpsI GAGTC 4 cut(s) 315, 331, 569, 955
Ppu21I YACGTR 1 cut(s) 938
PpuMI RGGWCCY 2 cut(s) 1046, 1711
Psp124BI GAGCTC 1 cut(s) 1781
Psp5II RGGWCCY 2 cut(s) 1046, 1711
Psp6I CCWGG 1 cut(s) 31
PspEI GGTNACC 1 cut(s) 930
PspFI CCCAGC 1 cut(s) 1499
PspGI CCWGG 1 cut(s) 31
PspN4I GGNNCC 8 cut(s) 486, 959, 1048, 1062, 1420, 1549, 1681, 1897
PspPI GGNCC 4 cut(s) 1046, 1646, 1711, 1896
PspPPI RGGWCCY 2 cut(s) 1046, 1711
PspXI VCTCGAGB 1 cut(s) 1227
PstNI CAGNNNCTG 3 cut(s) 1024, 1121, 1640
PsuI RGATCY 5 cut(s) 484, 699, 813, 1060, 1302
PvuII CAGCTG 1 cut(s) 451
RsaI GTAC 3 cut(s) 55, 854, 1420
RsaNI GTAC 3 cut(s) 54, 853, 1419
RseI CAYNNNNRTG 2 cut(s) 1317, 1443
SacI GAGCTC 1 cut(s) 1781
SapI GCTCTTC 1 cut(s) 1317
SaqAI TTAA 6 cut(s) 189, 368, 510, 635, 717, 1011
SatI GCNGC 3 cut(s) 587, 1116, 1185
Sau3AI GATC 8 cut(s) 213, 453, 484, 699, 813, 844, 1060, 1302
Sau96I GGNCC 4 cut(s) 1046, 1646, 1711, 1896
SchI GAGTC 4 cut(s) 316, 332, 570, 956
ScrFI CCNGG 2 cut(s) 33, 863
SduI GDGCHC 6 cut(s) 67, 787, 962, 1108, 1220, 1781
SfaNI GCATC 7 cut(s) 883, 1287, 1346, 1384, 1393, 1601, 1780
SfcI CTRYAG 1 cut(s) 1287
Sfr274I CTCGAG 1 cut(s) 1227
SinI GGWCC 4 cut(s) 1046, 1646, 1711, 1896
SlaI CTCGAG 1 cut(s) 1227
SmiMI CAYNNNNRTG 2 cut(s) 1317, 1443
SmlI CTYRAG 3 cut(s) 797, 1196, 1227
SmoI CTYRAG 3 cut(s) 797, 1196, 1227
SpeI ACTAGT 1 cut(s) 208
SsiI CCGC 2 cut(s) 586, 1262
SspI AATATT 1 cut(s) 887
SspMI CTAG 6 cut(s) 11, 209, 651, 731, 1155, 1806
SstI GAGCTC 1 cut(s) 1781
StyD4I CCNGG 2 cut(s) 31, 861
StyI CCWWGG 7 cut(s) 197, 410, 514, 953, 1188, 1438, 1714
TaaI ACNGT 4 cut(s) 129, 857, 1787, 1945
TaiI ACGT 1 cut(s) 940
TaqI TCGA 4 cut(s) 305, 1228, 1595, 1963
TaqII GACCGA 1 cut(s) 1263
TauI GCSGC 1 cut(s) 589
TfiI GAWTC 7 cut(s) 302, 338, 689, 1283, 1823, 1879, 1907
Tru1I TTAA 6 cut(s) 189, 368, 510, 635, 717, 1011
Tru9I TTAA 6 cut(s) 189, 368, 510, 635, 717, 1011
TscAI CASTG 1 cut(s) 1792
TseFI GTSAC 2 cut(s) 857, 930
TseI GCWGC 2 cut(s) 1115, 1184
Tsp45I GTSAC 2 cut(s) 857, 930
TspGWI ACGGA 2 cut(s) 545, 1791
TspRI CASTG 1 cut(s) 1792
VpaK11BI GGWCC 4 cut(s) 1046, 1646, 1711, 1896
XapI RAATTY 1 cut(s) 993
XbaI TCTAGA 2 cut(s) 650, 730
XceI RCATGY 1 cut(s) 524
XhoI CTCGAG 1 cut(s) 1227
XmiI GTMKAC 1 cut(s) 205
XmnI GAANNNNTTC 1 cut(s) 444
XspI CTAG 6 cut(s) 11, 209, 651, 731, 1155, 1806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.