Rh2AG461400

NUMOD3 motif (2 copies)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
67863608 .. 67868524
4917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG461400.1

Sequence Viewer

Length: 1434 bp
ATGGGGTGGGAAAGACGGCGGCAAAAGCTATCATTGCAGGAAAATTGCTGTTATGAATGGCAGAACTTAATTGCTGAAGCCTCTAGACGAGGTTATGATGGTGAGGAGGAGTTGCAATGGGATTCCTACAAGATCTTAGATGGAAAGCTTAAAGAGGAGTATCTAGAGAGTATAGAACAAAGGAAAATAATGCGCAGGCCAAAAGGAAGCAAGAGAGCACCCAAATCTCTTGAGCAAAGGAGGAAGATCTCACAAGCAATCTCAGCAAAATGGAACGATCCGGAGTACCGTGACCGGGTTTGCTCTGCCTTGTCTAAATATTATGATGCGTCCTATGGAAATGAAAGAAAGTCAAGAAAAAGGTCACCACGTAATACTGAGTCCCCAAGAAGGAGCCCTACAAAGAAAAAGGTTTTTGAAGAAAAAAAAATTTCAAAGAATGAGGTTAAACTCCAGAAACTGAAGTTGAGGAGAAGTAAAGGACCCATGTATAAGGATCCTCTGGCAAGTTCTAAGATGGAGATGATAAAGAACATCAGAGCACAAAGAGCAGCTACTGAAACCAAGAAAACTGAAGCCATAGAACGAGCTAGGCTATTGATTGCTGAAGCTGAGAAGGCTGCCATGGCTCTTGAGGCTTCTGCAACTAAGAGCCCTGTTGCTCGAGCTTCCCTCATTGAAACGCGACAGCTTATAGCGGAGGCAATTCGGTCAATTGAATCTATAGACACGATGCAGATCTCTTCACATGAGAATGAAGAGCCTTCAGTTGCATCAAATGAAGTGATTAGCCAGAGTGAGAAGGAAAACTGGTTTTGGGGTCTGACTGATGCAGATGATGCAAAGGTAAATGGTACCCTAACCTTTTCATCCCATGGGAATGAAAAGCCTTCAGTCCCACCAAATGAAGTGATTAGCCAAGATGAGAAGGAAGCTGGGATTTGGGGTTTGACTGAAGCAGATAATAGAAAGGTGGTGAATGGCACCCAGACCTTTTCCATCAACGATAATGAAGACCCCTTATTTGCATCGAATGAAGTGCTTAGTCAGATGGAGAAGGAAACATATACAGGGTCTGGTGGTCCGACTGAAGCATACAATGGAAAAGTAAATGGCACCCCAACCTTATCGTCAATTATAGACGAGGACCTTGGCTTTGACGAGTTCACCTTGCAGGATATGCCAAGTGATGAAGATGAGCTTCCCCCAATGGACTCTGACAGTGATGCTTTGCCTCCGTCTAGTTCGGAGCAATCAGATTCAAGCATTCAATCAGACGAATTAGACCCAAATGAGAACGATGAATGCTACAAGAATCTTCAACTCAATGGGACCAAAGTTGAATCCCAAGAAGATGAAACACCTTCAACATCGGCTACTGTAACTAAAAAGTGGGTTCGAGGGAGGCTCATTGAAGTACCTGAAGAAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

477

Amino Acids

53.94

Weight (kDa)

5.09

Isoelectric Point (pI)

62.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 194
Acc65I GGTACC 1 cut(s) 854
AccB1I GGYRCC 3 cut(s) 854, 983, 1115
AccII CGCG 1 cut(s) 685
AccIII TCCGGA 1 cut(s) 280
AciI CCGC 2 cut(s) 19, 698
AclWI GGATC 3 cut(s) 272, 491, 504
AcsI RAATTY 1 cut(s) 429
AcuI CTGAAG 8 cut(s) 96, 482, 594, 627, 750, 876, 975, 1110
AfaI GTAC 3 cut(s) 287, 856, 1419
AfiI CCNNNNNNNGG 2 cut(s) 295, 390
Alw21I GWGCWC 2 cut(s) 220, 544
AlwI GGATC 3 cut(s) 272, 491, 504
AlwNI CAGNNNCTG 3 cut(s) 460, 557, 1076
Ama87I CYCGRG 1 cut(s) 663
Aor13HI TCCGGA 1 cut(s) 280
AoxI GGCC 1 cut(s) 197
ApeKI GCWGC 2 cut(s) 551, 620
ApoI RAATTY 1 cut(s) 429
ArsI GACNNNNNNTTYG 4 cut(s) 1007, 1039, 1139, 1171
Asp718I GGTACC 1 cut(s) 854
AspLEI GCGC 1 cut(s) 195
AspS9I GGNCC 4 cut(s) 482, 1082, 1147, 1332
AsuC2I CCSGG 1 cut(s) 296
AsuHPI GGTGA 4 cut(s) 113, 357, 988, 1159
AvaI CYCGRG 1 cut(s) 663
AvaII GGWCC 4 cut(s) 482, 1082, 1147, 1332
BamHI GGATCC 1 cut(s) 496
BanI GGYRCC 3 cut(s) 854, 983, 1115
BanII GRGCYC 2 cut(s) 398, 656
BarI GAAGNNNNNNTAC 2 cut(s) 382, 414
BbsI GAAGAC 1 cut(s) 1020
Bbv12I GWGCWC 2 cut(s) 220, 544
BbvI GCAGC 2 cut(s) 563, 607
BccI CCATC 5 cut(s) 92, 134, 511, 1007, 1045
BceAI ACGGC 1 cut(s) 32
BcgI CGANNNNNNTGC 2 cut(s) 1021, 1055
BcnI CCSGG 1 cut(s) 296
BfaI CTAG 4 cut(s) 84, 164, 591, 1242
BfmI CTRYAG 1 cut(s) 723
BglII AGATCT 3 cut(s) 132, 246, 738
BisI GCNGC 3 cut(s) 20, 552, 621
BlsI GCNGC 3 cut(s) 21, 553, 622
Bme1390I CCNGG 1 cut(s) 296
Bme18I GGWCC 4 cut(s) 482, 1082, 1147, 1332
BmeT110I CYCGRG 1 cut(s) 663
BmgT120I GGNCC 4 cut(s) 482, 1082, 1147, 1332
BmiI GGNNCC 7 cut(s) 395, 484, 498, 856, 985, 1117, 1333
BmrFI CCNGG 1 cut(s) 296
BmsI GCATC 7 cut(s) 316, 723, 782, 820, 829, 1037, 1216
BpiI GAAGAC 1 cut(s) 1020
BplI GAGNNNNNCTC 4 cut(s) 657, 689, 1392, 1424
BpmI CTGGAG 1 cut(s) 437
BpuEI CTTGAG 2 cut(s) 251, 653
BpuMI CCSGG 1 cut(s) 296
BsaAI YACGTR 1 cut(s) 371
BsaBI GATNNNNATC 1 cut(s) 737
BsaJI CCNNGG 3 cut(s) 624, 874, 1150
BsaWI WCCGGW 1 cut(s) 280
Bsc4I CCNNNNNNNGG 2 cut(s) 295, 390
Bse1I ACTGG 1 cut(s) 815
Bse3DI GCAATG 2 cut(s) 32, 122
Bse8I GATNNNNATC 1 cut(s) 737
BseAI TCCGGA 1 cut(s) 280
BseDI CCNNGG 3 cut(s) 624, 874, 1150
BseGI GGATG 1 cut(s) 869
BseJI GATNNNNATC 1 cut(s) 737
BseLI CCNNNNNNNGG 2 cut(s) 295, 390
BseMI GCAATG 2 cut(s) 32, 122
BseMII CTCAG 3 cut(s) 276, 369, 603
BseNI ACTGG 1 cut(s) 815
BseRI GAGGAG 4 cut(s) 119, 122, 170, 484
BseXI GCAGC 2 cut(s) 563, 607
BseYI CCCAGC 1 cut(s) 935
Bsh1236I CGCG 1 cut(s) 685
BshFI GGCC 1 cut(s) 199
BshNI GGYRCC 3 cut(s) 854, 983, 1115
BsiHKAI GWGCWC 2 cut(s) 220, 544
BsiHKCI CYCGRG 1 cut(s) 663
BsiSI CCGG 2 cut(s) 281, 295
BslFI GGGAC 3 cut(s) 367, 881, 1345
BslI CCNNNNNNNGG 2 cut(s) 295, 390
BsmFI GGGAC 3 cut(s) 367, 881, 1345
BsmI GAATGC 2 cut(s) 1266, 1310
BsnI GGCC 1 cut(s) 199
BsoBI CYCGRG 1 cut(s) 663
Bsp1286I GDGCHC 4 cut(s) 220, 398, 544, 656
Bsp13I TCCGGA 1 cut(s) 280
Bsp143I GATC 5 cut(s) 132, 246, 277, 496, 738
Bsp19I CCATGG 2 cut(s) 624, 874
BspACI CCGC 2 cut(s) 19, 698
BspANI GGCC 1 cut(s) 199
BspCNI CTCAG 3 cut(s) 275, 370, 604
BspEI TCCGGA 1 cut(s) 280
BspFNI CGCG 1 cut(s) 685
BspLI GGNNCC 7 cut(s) 395, 484, 498, 856, 985, 1117, 1333
BspPI GGATC 3 cut(s) 272, 491, 504
BspQI GCTCTTC 1 cut(s) 753
BspT107I GGYRCC 3 cut(s) 854, 983, 1115
BsrDI GCAATG 2 cut(s) 32, 122
BsrI ACTGG 1 cut(s) 815
BssECI CCNNGG 3 cut(s) 624, 874, 1150
BssMI GATC 5 cut(s) 132, 246, 277, 496, 738
BssT1I CCWWGG 3 cut(s) 624, 874, 1150
Bst4CI ACNGT 3 cut(s) 290, 1223, 1381
Bst6I CTCTTC 2 cut(s) 748, 753
BstAPI GCANNNNNTGC 2 cut(s) 839, 1180
BstBAI YACGTR 1 cut(s) 371
BstC8I GCNNGC 1 cut(s) 197
BstDEI CTNAG 8 cut(s) 136, 262, 378, 513, 612, 648, 1043, 1431
BstDSI CCRYGG 2 cut(s) 624, 874
BstEII GGTNACC 1 cut(s) 363
BstF5I GGATG 1 cut(s) 869
BstFNI CGCG 1 cut(s) 685
BstHHI GCGC 1 cut(s) 195
BstKTI GATC 5 cut(s) 135, 249, 280, 499, 741
BstMBI GATC 5 cut(s) 132, 246, 277, 496, 738
BstMWI GCNNNNNNNGC 9 cut(s) 25, 34, 263, 548, 617, 626, 635, 839, 1180
BstPI GGTNACC 1 cut(s) 363
BstSCI CCNGG 1 cut(s) 294
BstSFI CTRYAG 1 cut(s) 723
BstUI CGCG 1 cut(s) 685
BstV1I GCAGC 2 cut(s) 563, 607
BstV2I GAAGAC 1 cut(s) 1020
BstX2I RGATCY 4 cut(s) 132, 246, 496, 738
BstYI RGATCY 4 cut(s) 132, 246, 496, 738
BsuRI GGCC 1 cut(s) 199
BtgI CCRYGG 2 cut(s) 624, 874
BtsCI GGATG 1 cut(s) 869
BtsIMutI CAGTG 1 cut(s) 1228
Cac8I GCNNGC 1 cut(s) 197
CaiI CAGNNNCTG 3 cut(s) 460, 557, 1076
CfoI GCGC 1 cut(s) 195
Cfr13I GGNCC 4 cut(s) 482, 1082, 1147, 1332
CseI GACGC 1 cut(s) 318
Csp6I GTAC 3 cut(s) 286, 855, 1418
CviAII CATG 4 cut(s) 487, 625, 749, 875
CviQI GTAC 3 cut(s) 286, 855, 1418
DdeI CTNAG 8 cut(s) 136, 262, 378, 513, 612, 648, 1043, 1431
DpnI GATC 5 cut(s) 134, 248, 279, 498, 740
DpnII GATC 5 cut(s) 132, 246, 277, 496, 738
Eam1104I CTCTTC 2 cut(s) 748, 753
EarI CTCTTC 2 cut(s) 748, 753
Eco130I CCWWGG 3 cut(s) 624, 874, 1150
Eco24I GRGCYC 2 cut(s) 398, 656
Eco47I GGWCC 4 cut(s) 482, 1082, 1147, 1332
Eco57I CTGAAG 8 cut(s) 96, 482, 594, 627, 750, 876, 975, 1110
Eco88I CYCGRG 1 cut(s) 663
Eco91I GGTNACC 1 cut(s) 363
EcoO109I RGGNCCY 2 cut(s) 482, 1147
EcoO65I GGTNACC 1 cut(s) 363
EcoT14I CCWWGG 3 cut(s) 624, 874, 1150
EcoT38I GRGCYC 2 cut(s) 398, 656
ErhI CCWWGG 3 cut(s) 624, 874, 1150
FaeI CATG 4 cut(s) 490, 628, 752, 878
FalI AAGNNNNNCTT 2 cut(s) 1185, 1217
FaqI GGGAC 3 cut(s) 367, 881, 1345
FatI CATG 4 cut(s) 486, 624, 748, 874
Fnu4HI GCNGC 3 cut(s) 20, 552, 621
FokI GGATG 1 cut(s) 856
FriOI GRGCYC 2 cut(s) 398, 656
Fsp4HI GCNGC 3 cut(s) 20, 552, 621
FspBI CTAG 4 cut(s) 84, 164, 591, 1242
FspI TGCGCA 1 cut(s) 194
GlaI GCGC 1 cut(s) 194
GluI GCNGC 3 cut(s) 20, 552, 621
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 437
HaeIII GGCC 1 cut(s) 199
HapII CCGG 2 cut(s) 281, 295
HgaI GACGC 1 cut(s) 318
HhaI GCGC 1 cut(s) 195
Hin1II CATG 4 cut(s) 490, 628, 752, 878
Hin6I GCGC 1 cut(s) 193
HinP1I GCGC 1 cut(s) 193
HindIII AAGCTT 2 cut(s) 146, 1428
HinfI GANTC 7 cut(s) 122, 380, 719, 1214, 1259, 1315, 1343
HpaII CCGG 2 cut(s) 281, 295
HphI GGTGA 4 cut(s) 113, 357, 988, 1159
Hpy166II GTNNAC 1 cut(s) 1167
Hpy188I TCNGA 8 cut(s) 539, 825, 1050, 1086, 1219, 1249, 1258, 1276
Hpy188III TCNNGA 7 cut(s) 84, 164, 230, 281, 354, 454, 632
Hpy8I GTNNAC 1 cut(s) 1167
HpyAV CCTTC 8 cut(s) 384, 610, 774, 796, 900, 922, 1051, 1374
HpyCH4III ACNGT 3 cut(s) 290, 1223, 1381
HpyCH4IV ACGT 1 cut(s) 370
HpyCH4V TGCA 9 cut(s) 37, 115, 644, 736, 773, 833, 842, 1028, 1174
HpyF10VI GCNNNNNNNGC 9 cut(s) 25, 34, 263, 548, 617, 626, 635, 839, 1180
HpyF3I CTNAG 8 cut(s) 136, 262, 378, 513, 612, 648, 1043, 1431
HpySE526I ACGT 1 cut(s) 370
Hsp92II CATG 4 cut(s) 490, 628, 752, 878
HspAI GCGC 1 cut(s) 193
Kpn2I TCCGGA 1 cut(s) 280
KpnI GGTACC 1 cut(s) 858
Kzo9I GATC 5 cut(s) 132, 246, 277, 496, 738
LguI GCTCTTC 1 cut(s) 753
LmnI GCTCC 2 cut(s) 393, 1249
Lsp1109I GCAGC 2 cut(s) 563, 607
LweI GCATC 7 cut(s) 316, 723, 782, 820, 829, 1037, 1216
MaeI CTAG 4 cut(s) 84, 164, 591, 1242
MaeII ACGT 1 cut(s) 370
MaeIII GTNAC 3 cut(s) 290, 363, 1381
MalI GATC 5 cut(s) 134, 248, 279, 498, 740
MboI GATC 5 cut(s) 132, 246, 277, 496, 738
MboII GAAGA 8 cut(s) 256, 431, 735, 770, 1025, 1205, 1310, 1364
MfeI CAATTG 1 cut(s) 714
MflI RGATCY 4 cut(s) 132, 246, 496, 738
MhlI GDGCHC 4 cut(s) 220, 398, 544, 656
MluCI AATT 7 cut(s) 43, 69, 429, 705, 714, 1134, 1280
MlyI GAGTC 2 cut(s) 389, 1208
MmeI TCCRAC 1 cut(s) 1109
MroI TCCGGA 1 cut(s) 280
MseI TTAA 3 cut(s) 68, 150, 447
MslI CAYNNNNRTG 2 cut(s) 753, 879
MspI CCGG 2 cut(s) 281, 295
MspR9I CCNGG 1 cut(s) 296
MunI CAATTG 1 cut(s) 714
Mva1269I GAATGC 2 cut(s) 1266, 1310
MvnI CGCG 1 cut(s) 685
MwoI GCNNNNNNNGC 9 cut(s) 25, 34, 263, 548, 617, 626, 635, 839, 1180
NciI CCSGG 1 cut(s) 296
NcoI CCATGG 2 cut(s) 624, 874
NdeII GATC 5 cut(s) 132, 246, 277, 496, 738
NlaIII CATG 4 cut(s) 490, 628, 752, 878
NlaIV GGNNCC 7 cut(s) 395, 484, 498, 856, 985, 1117, 1333
NmuCI GTSAC 2 cut(s) 290, 363
NsbI TGCGCA 1 cut(s) 194
PaeR7I CTCGAG 1 cut(s) 663
PciSI GCTCTTC 1 cut(s) 753
PctI GAATGC 2 cut(s) 1266, 1310
PfeI GAWTC 5 cut(s) 122, 719, 1259, 1315, 1343
PkrI GCNGC 3 cut(s) 21, 553, 622
PleI GAGTC 2 cut(s) 388, 1208
PpsI GAGTC 2 cut(s) 388, 1208
Ppu21I YACGTR 1 cut(s) 371
PpuMI RGGWCCY 2 cut(s) 482, 1147
Psp5II RGGWCCY 2 cut(s) 482, 1147
PspEI GGTNACC 1 cut(s) 363
PspFI CCCAGC 1 cut(s) 935
PspN4I GGNNCC 7 cut(s) 395, 484, 498, 856, 985, 1117, 1333
PspPI GGNCC 4 cut(s) 482, 1082, 1147, 1332
PspPPI RGGWCCY 2 cut(s) 482, 1147
PspXI VCTCGAGB 1 cut(s) 663
PstNI CAGNNNCTG 3 cut(s) 460, 557, 1076
PsuI RGATCY 4 cut(s) 132, 246, 496, 738
RsaI GTAC 3 cut(s) 287, 856, 1419
RsaNI GTAC 3 cut(s) 286, 855, 1418
RseI CAYNNNNRTG 2 cut(s) 753, 879
SapI GCTCTTC 1 cut(s) 753
SaqAI TTAA 3 cut(s) 68, 150, 447
SatI GCNGC 3 cut(s) 20, 552, 621
Sau3AI GATC 5 cut(s) 132, 246, 277, 496, 738
Sau96I GGNCC 4 cut(s) 482, 1082, 1147, 1332
SchI GAGTC 2 cut(s) 389, 1208
ScrFI CCNGG 1 cut(s) 296
SduI GDGCHC 4 cut(s) 220, 398, 544, 656
SfaNI GCATC 7 cut(s) 316, 723, 782, 820, 829, 1037, 1216
SfcI CTRYAG 1 cut(s) 723
Sfr274I CTCGAG 1 cut(s) 663
SinI GGWCC 4 cut(s) 482, 1082, 1147, 1332
SlaI CTCGAG 1 cut(s) 663
SmiMI CAYNNNNRTG 2 cut(s) 753, 879
SmlI CTYRAG 3 cut(s) 230, 632, 663
SmoI CTYRAG 3 cut(s) 230, 632, 663
Sse9I AATT 7 cut(s) 43, 69, 429, 705, 714, 1134, 1280
SsiI CCGC 2 cut(s) 19, 698
SspI AATATT 1 cut(s) 320
SspMI CTAG 4 cut(s) 84, 164, 591, 1242
StyD4I CCNGG 1 cut(s) 294
StyI CCWWGG 3 cut(s) 624, 874, 1150
TaaI ACNGT 3 cut(s) 290, 1223, 1381
TaiI ACGT 1 cut(s) 373
TaqI TCGA 3 cut(s) 664, 1031, 1399
TaqII GACCGA 1 cut(s) 699
TasI AATT 7 cut(s) 43, 69, 429, 705, 714, 1134, 1280
TauI GCSGC 1 cut(s) 22
TfiI GAWTC 5 cut(s) 122, 719, 1259, 1315, 1343
Tru1I TTAA 3 cut(s) 68, 150, 447
Tru9I TTAA 3 cut(s) 68, 150, 447
TscAI CASTG 1 cut(s) 1228
TseFI GTSAC 2 cut(s) 290, 363
TseI GCWGC 2 cut(s) 551, 620
Tsp45I GTSAC 2 cut(s) 290, 363
TspGWI ACGGA 1 cut(s) 1227
TspRI CASTG 1 cut(s) 1228
VpaK11BI GGWCC 4 cut(s) 482, 1082, 1147, 1332
XapI RAATTY 1 cut(s) 429
XbaI TCTAGA 2 cut(s) 83, 163
XhoI CTCGAG 1 cut(s) 663
XspI CTAG 4 cut(s) 84, 164, 591, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.