Rroxscaffold_2G00099140

NUMOD3 motif (2 copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006219
Physical Location & Seq
Reverse (-)
20678729 .. 20683581
4853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00099140.1

Sequence Viewer

Length: 2106 bp
ATGTTTCCGAACGCTTCAAGATTTTGTTTACTTTTTGTGTTGGTAGAGGCATTTGTTGTGTATGCAATTGTCAAAGGTGTTTGTGACCTTTTTGTTAAGAAAGGGATGGCTTTTATGTTGTTTGAAGCACACCCTAATGTTACTGAGACCTTTTCCAATACATATGCAGTACTTAGCAGATCAGAGATTGCTGTTGCTCAGCCTGGCTTCCAAAACCATCTATGTACCCTCAGGGCTCAAACCTCTCTCCATAGTAAAGTAATTTCAAGTCCATTCACCTTTGGAATTGACAAGAAACTGTCCTCATGGTATAAATCCTCGGACATAGCTAAAAAGTCGTACTTCAACTTGGGGAACAGTAAGACCCCAAGGAGTAGACTAGTGATCCAAGCAGTTGCTACTTTTGAAGCAAAAACTCTTGTTCATAATGAGAATGGACACGCGGGTTACACCAGTTCAGAGCTGAATAAGGATTCGAGTCCCTTTCAGCGAGAGTCTTCAAGTGATGATTCCTCAGAAATGGATGAGAAAGAGAAGTTAAGGCGATTGAGGATTTCTAAAGCAAATAAAGGGAACACACCATGGAACAAAGGAAGAAAGCATAGTCCTGAAACCCTTCAGCTGATCAAAGAAAGAACAAGGCTTGCAATGCAGGATCCTAAGGTCAAAATGAAGTTGGTTAACCTTGGACATGCTCAAACGTGGGTATTTGTTGTTCTGGAGGAGACAAGAACAAAAATTGGGATTGGAGTCCGGATGGGGTGGGAAAGACGGCGGCAAAAGCTATCATTGCAGGAAAATTGCTGTTATGAATGGCAGAACTTAATTGCCGAAGCCTCTAGACGAGGTTATGATGGTGAGGAGGAGTTGCAATGGGATTCCTACAAGATCTTAGATGGAAAGCTTAAAGAGGAGTATCTAGAGAGTATAGAACAAAGGAAAATAATGCGCAGGCCAAAAGGAAGCAAGAGAGCACCCAAATCTCTTGAGCAAAGGAGGAAGATCTCACAAGCAATCTCAGCAAAATGGAACGATCCGGAGTACCGTGACCGGGTTTGCTCTGCCTTGTCTAAATATTACGATGCGTCCTATGGAGCTGAAAGAAAGCCAAGAAAAAGGTCACCACGTAATACTGAGTCCCCAAGAAGGAGCCCTACAAAGAAAAAGGATCCTCTGGCAAGTTCTAAGATGGAGATGATAAAGAACATCAGAGCACAAAGAGCAGCTACTGAAACCAAGAAAACTGAAGCCATAGAACGAGCTAGGCTATTGATTGCTGAAGCTGAGAAGGCTGCCATGGCTCTTGAGGCTTCTGCAACTAAGAGTCCTGTTGCTCGAGCTTCCCTCATTGAAACGCGACAGCTTATAGCCGAGGCAATTCGGTCAATTGAATCTATAGACACGATGCAGATCTCTTCACATGAGAATGAAGAGCCTTCAGTTGCATCAAATGAAGAGATTAGCCAGAGTGAGAAGGAAAACTGGTTTTGGGGTCTGACTGATGCAGATGATGCAAAGGTAAATGGTACCCTAACCTTTTCATCCCATGGGTATGAAAAGCCTTCAGTCCCACCAAATGAAGTGATTAGCCAAGTTGAGAAGGAAGCTGGGATTTGGGGTTTGACTGAAGCAGATAATGGAAAGGTGGTGAATGGCACCCAGACCTTTTCCATCAACGATAATGAGGACCCTTTATTTGCATCGAATGAAGTGCTTAGTCATATGGAGAAGGAAACAAATACGGGGTCTGGTGGTCCGACTGAAGCATACAATGGAAAAGTAAATGGCACCCCAACCTTATCGTCAATTATAGACGAGGACCTTGGCTTTGACGAGTTCACCTTGCAGGATATGCCAAGTGATGAAGATGAGCTTCCCCCAATGAGCTCTGACAGTGATGCTTTGCCTCCGTCTAGTTCGGAGCAATCGGATTCAAGCATTCAATCAGACGAATTAGACCCAAATGAGAACGATGAATGCTACAAGAAGCTTCAACTCAATGGGACCAAAGTTGAATCCCAGGAAGATGAAACACCTTCAACACCGGCTACTGTAACTAAAAAGTGGGTTCGAGGGAGGCTCATTGAAGTACCTGAAGAAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUMOD3

Protein Analysis

701

Amino Acids

78.83

Weight (kDa)

6.01

Isoelectric Point (pI)

56.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NUMOD3 PF07460 182 - 209 2.4e-08 NUMOD3 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 950
Acc65I GGTACC 1 cut(s) 1526
AccB1I GGYRCC 3 cut(s) 1526, 1655, 1787
AccI GTMKAC 1 cut(s) 376
AccII CGCG 2 cut(s) 443, 1357
AccIII TCCGGA 2 cut(s) 753, 1036
AciI CCGC 2 cut(s) 443, 775
AclWI GGATC 6 cut(s) 379, 650, 663, 1028, 1163, 1176
AcuI CTGAAG 7 cut(s) 602, 1266, 1299, 1422, 1548, 1647, 1782
AfaI GTAC 6 cut(s) 171, 226, 341, 1043, 1528, 2091
AfiI CCNNNNNNNGG 2 cut(s) 1051, 1146
AhlI ACTAGT 1 cut(s) 379
AjnI CCWGG 2 cut(s) 202, 2019
Alw21I GWGCWC 3 cut(s) 976, 1216, 1889
Alw26I GTCTC 2 cut(s) 140, 719
AlwI GGATC 6 cut(s) 379, 650, 663, 1028, 1163, 1176
AlwNI CAGNNNCTG 1 cut(s) 1229
Ama87I CYCGRG 1 cut(s) 1335
Aor13HI TCCGGA 2 cut(s) 753, 1036
AoxI GGCC 1 cut(s) 953
ApeKI GCWGC 2 cut(s) 1223, 1292
ArsI GACNNNNNNTTYG 6 cut(s) 1679, 1711, 1730, 1762, 1811, 1843
Asp700I GAANNNNTTC 1 cut(s) 615
Asp718I GGTACC 1 cut(s) 1526
AspLEI GCGC 1 cut(s) 951
AspS9I GGNCC 4 cut(s) 1687, 1754, 1819, 2004
AsuC2I CCSGG 1 cut(s) 1052
AsuHPI GGTGA 5 cut(s) 268, 869, 1113, 1660, 1831
AvaI CYCGRG 1 cut(s) 1335
AvaII GGWCC 4 cut(s) 1687, 1754, 1819, 2004
AxyI CCTNAGG 2 cut(s) 230, 660
BamHI GGATCC 2 cut(s) 655, 1168
BanI GGYRCC 3 cut(s) 1526, 1655, 1787
BanII GRGCYC 3 cut(s) 238, 1154, 1889
BarI GAAGNNNNNNTAC 2 cut(s) 1138, 1170
BbsI GAAGAC 1 cut(s) 489
Bbv12I GWGCWC 3 cut(s) 976, 1216, 1889
BbvI GCAGC 2 cut(s) 1235, 1279
BccI CCATC 7 cut(s) 100, 225, 751, 848, 890, 1183, 1679
BceAI ACGGC 1 cut(s) 788
BcgI CGANNNNNNTGC 2 cut(s) 1693, 1727
BciT130I CCWGG 2 cut(s) 204, 2021
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 1 cut(s) 1052
BcoDI GTCTC 2 cut(s) 140, 719
BcuI ACTAGT 1 cut(s) 379
BfaI CTAG 5 cut(s) 380, 840, 920, 1263, 1914
BfmI CTRYAG 1 cut(s) 1395
BglII AGATCT 3 cut(s) 888, 1002, 1410
BisI GCNGC 3 cut(s) 776, 1224, 1293
BlpI GCTNAGC 1 cut(s) 198
BlsI GCNGC 3 cut(s) 777, 1225, 1294
BmcAI AGTACT 1 cut(s) 171
Bme1390I CCNGG 3 cut(s) 204, 1052, 2021
Bme18I GGWCC 4 cut(s) 1687, 1754, 1819, 2004
BmeT110I CYCGRG 1 cut(s) 1335
BmgT120I GGNCC 4 cut(s) 1687, 1754, 1819, 2004
BmiI GGNNCC 8 cut(s) 657, 1151, 1170, 1528, 1657, 1689, 1789, 2005
BmrFI CCNGG 3 cut(s) 204, 1052, 2021
BmsI GCATC 7 cut(s) 1072, 1395, 1454, 1492, 1501, 1709, 1888
BpiI GAAGAC 1 cut(s) 489
BplI GAGNNNNNCTC 4 cut(s) 1329, 1361, 2064, 2096
BpmI CTGGAG 1 cut(s) 740
Bpu1102I GCTNAGC 1 cut(s) 198
BpuEI CTTGAG 2 cut(s) 1007, 1325
BpuMI CCSGG 1 cut(s) 1052
BsaAI YACGTR 1 cut(s) 1127
BsaBI GATNNNNATC 1 cut(s) 1409
BsaI GGTCTC 1 cut(s) 140
BsaJI CCNNGG 9 cut(s) 318, 368, 581, 685, 1296, 1371, 1546, 1822, 2019
BsaWI WCCGGW 2 cut(s) 753, 1036
Bsc4I CCNNNNNNNGG 2 cut(s) 1051, 1146
Bse118I RCCGGY 1 cut(s) 2044
Bse1I ACTGG 2 cut(s) 453, 1487
Bse21I CCTNAGG 2 cut(s) 230, 660
Bse3DI GCAATG 3 cut(s) 654, 788, 878
Bse8I GATNNNNATC 1 cut(s) 1409
BseAI TCCGGA 2 cut(s) 753, 1036
BseBI CCWGG 2 cut(s) 204, 2021
BseDI CCNNGG 9 cut(s) 318, 368, 581, 685, 1296, 1371, 1546, 1822, 2019
BseGI GGATG 4 cut(s) 111, 529, 762, 1541
BseJI GATNNNNATC 1 cut(s) 1409
BseLI CCNNNNNNNGG 2 cut(s) 1051, 1146
BseMI GCAATG 3 cut(s) 654, 788, 878
BseMII CTCAG 7 cut(s) 135, 212, 244, 528, 1032, 1125, 1275
BseNI ACTGG 2 cut(s) 453, 1487
BseRI GAGGAG 4 cut(s) 737, 875, 878, 926
BseXI GCAGC 2 cut(s) 1235, 1279
BseYI CCCAGC 1 cut(s) 1607
Bsh1236I CGCG 2 cut(s) 443, 1357
BshFI GGCC 1 cut(s) 955
BshNI GGYRCC 3 cut(s) 1526, 1655, 1787
BsiHKAI GWGCWC 3 cut(s) 976, 1216, 1889
BsiHKCI CYCGRG 1 cut(s) 1335
BsiSI CCGG 4 cut(s) 754, 1037, 1051, 2045
BslFI GGGAC 4 cut(s) 465, 1123, 1553, 2017
BslI CCNNNNNNNGG 2 cut(s) 1051, 1146
BsmAI GTCTC 2 cut(s) 140, 719
BsmFI GGGAC 4 cut(s) 465, 1123, 1553, 2017
BsmI GAATGC 2 cut(s) 1938, 1982
BsnI GGCC 1 cut(s) 955
Bso31I GGTCTC 1 cut(s) 140
BsoBI CYCGRG 1 cut(s) 1335
Bsp1286I GDGCHC 5 cut(s) 238, 976, 1154, 1216, 1889
Bsp13I TCCGGA 2 cut(s) 753, 1036
Bsp143I GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
Bsp1720I GCTNAGC 1 cut(s) 198
Bsp19I CCATGG 3 cut(s) 581, 1296, 1546
BspACI CCGC 2 cut(s) 443, 775
BspANI GGCC 1 cut(s) 955
BspCNI CTCAG 7 cut(s) 136, 211, 243, 527, 1031, 1126, 1276
BspEI TCCGGA 2 cut(s) 753, 1036
BspFNI CGCG 2 cut(s) 443, 1357
BspLI GGNNCC 8 cut(s) 657, 1151, 1170, 1528, 1657, 1689, 1789, 2005
BspPI GGATC 6 cut(s) 379, 650, 663, 1028, 1163, 1176
BspQI GCTCTTC 1 cut(s) 1425
BspT107I GGYRCC 3 cut(s) 1526, 1655, 1787
BspTNI GGTCTC 1 cut(s) 140
BsrDI GCAATG 3 cut(s) 654, 788, 878
BsrFI RCCGGY 1 cut(s) 2044
BsrI ACTGG 2 cut(s) 453, 1487
BssAI RCCGGY 1 cut(s) 2044
BssECI CCNNGG 9 cut(s) 318, 368, 581, 685, 1296, 1371, 1546, 1822, 2019
BssMI GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
BssT1I CCWWGG 6 cut(s) 368, 581, 685, 1296, 1546, 1822
Bst2UI CCWGG 2 cut(s) 204, 2021
Bst4CI ACNGT 5 cut(s) 300, 359, 1046, 1895, 2053
Bst6I CTCTTC 3 cut(s) 1420, 1425, 1449
BstAPI GCANNNNNTGC 2 cut(s) 1511, 1852
BstBAI YACGTR 1 cut(s) 1127
BstC8I GCNNGC 2 cut(s) 645, 953
BstDSI CCRYGG 3 cut(s) 581, 1296, 1546
BstEII GGTNACC 1 cut(s) 1119
BstF5I GGATG 4 cut(s) 111, 529, 762, 1541
BstFNI CGCG 2 cut(s) 443, 1357
BstHHI GCGC 1 cut(s) 951
BstKTI GATC 9 cut(s) 182, 387, 627, 658, 891, 1005, 1036, 1171, 1413
BstMAI GTCTC 2 cut(s) 140, 719
BstMBI GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
BstNI CCWGG 2 cut(s) 204, 2021
BstNSI RCATGY 1 cut(s) 695
BstPI GGTNACC 1 cut(s) 1119
BstSCI CCNGG 3 cut(s) 202, 1050, 2019
BstSFI CTRYAG 1 cut(s) 1395
BstUI CGCG 2 cut(s) 443, 1357
BstV1I GCAGC 2 cut(s) 1235, 1279
BstV2I GAAGAC 1 cut(s) 489
BstX2I RGATCY 5 cut(s) 655, 888, 1002, 1168, 1410
BstYI RGATCY 5 cut(s) 655, 888, 1002, 1168, 1410
Bsu36I CCTNAGG 2 cut(s) 230, 660
BsuRI GGCC 1 cut(s) 955
BtgI CCRYGG 3 cut(s) 581, 1296, 1546
BtsCI GGATG 4 cut(s) 111, 529, 762, 1541
BtsIMutI CAGTG 1 cut(s) 1900
Cac8I GCNNGC 2 cut(s) 645, 953
CaiI CAGNNNCTG 1 cut(s) 1229
CfoI GCGC 1 cut(s) 951
Cfr10I RCCGGY 1 cut(s) 2044
Cfr13I GGNCC 4 cut(s) 1687, 1754, 1819, 2004
CseI GACGC 1 cut(s) 1074
Csp6I GTAC 6 cut(s) 170, 225, 340, 1042, 1527, 2090
CviAII CATG 6 cut(s) 306, 582, 692, 1297, 1421, 1547
CviQI GTAC 6 cut(s) 170, 225, 340, 1042, 1527, 2090
DpnI GATC 9 cut(s) 181, 386, 626, 657, 890, 1004, 1035, 1170, 1412
DpnII GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
Eam1104I CTCTTC 3 cut(s) 1420, 1425, 1449
EarI CTCTTC 3 cut(s) 1420, 1425, 1449
Ecl136II GAGCTC 1 cut(s) 1887
Eco130I CCWWGG 6 cut(s) 368, 581, 685, 1296, 1546, 1822
Eco24I GRGCYC 3 cut(s) 238, 1154, 1889
Eco31I GGTCTC 1 cut(s) 140
Eco47I GGWCC 4 cut(s) 1687, 1754, 1819, 2004
Eco53kI GAGCTC 1 cut(s) 1887
Eco57I CTGAAG 7 cut(s) 602, 1266, 1299, 1422, 1548, 1647, 1782
Eco81I CCTNAGG 2 cut(s) 230, 660
Eco88I CYCGRG 1 cut(s) 1335
Eco91I GGTNACC 1 cut(s) 1119
EcoICRI GAGCTC 1 cut(s) 1887
EcoO109I RGGNCCY 2 cut(s) 1687, 1819
EcoO65I GGTNACC 1 cut(s) 1119
EcoRII CCWGG 2 cut(s) 202, 2019
EcoT14I CCWWGG 6 cut(s) 368, 581, 685, 1296, 1546, 1822
EcoT38I GRGCYC 3 cut(s) 238, 1154, 1889
ErhI CCWWGG 6 cut(s) 368, 581, 685, 1296, 1546, 1822
FaeI CATG 6 cut(s) 309, 585, 695, 1300, 1424, 1550
FalI AAGNNNNNCTT 4 cut(s) 326, 358, 1857, 1889
FaqI GGGAC 4 cut(s) 465, 1123, 1553, 2017
FatI CATG 6 cut(s) 305, 581, 691, 1296, 1420, 1546
FauI CCCGC 1 cut(s) 436
FauNDI CATATG 2 cut(s) 163, 1722
FbaI TGATCA 1 cut(s) 624
FblI GTMKAC 1 cut(s) 376
Fnu4HI GCNGC 3 cut(s) 776, 1224, 1293
FokI GGATG 4 cut(s) 118, 536, 769, 1528
FriOI GRGCYC 3 cut(s) 238, 1154, 1889
Fsp4HI GCNGC 3 cut(s) 776, 1224, 1293
FspBI CTAG 5 cut(s) 380, 840, 920, 1263, 1914
FspI TGCGCA 1 cut(s) 950
GlaI GCGC 1 cut(s) 950
GluI GCNGC 3 cut(s) 776, 1224, 1293
GsaI CCCAGC 1 cut(s) 1611
GsuI CTGGAG 1 cut(s) 740
HaeIII GGCC 1 cut(s) 955
HapII CCGG 4 cut(s) 754, 1037, 1051, 2045
HgaI GACGC 1 cut(s) 1074
HhaI GCGC 1 cut(s) 951
Hin1II CATG 6 cut(s) 309, 585, 695, 1300, 1424, 1550
Hin6I GCGC 1 cut(s) 949
HinP1I GCGC 1 cut(s) 949
HincII GTYRAC 1 cut(s) 682
HindII GTYRAC 1 cut(s) 682
HindIII AAGCTT 3 cut(s) 902, 1988, 2100
HpaI GTTAAC 1 cut(s) 682
HpaII CCGG 4 cut(s) 754, 1037, 1051, 2045
HphI GGTGA 5 cut(s) 268, 869, 1113, 1660, 1831
Hpy166II GTNNAC 4 cut(s) 29, 377, 682, 1839
Hpy188III TCNNGA 9 cut(s) 18, 608, 719, 754, 840, 920, 986, 1037, 1304
Hpy8I GTNNAC 4 cut(s) 29, 377, 682, 1839
HpyAV CCTTC 9 cut(s) 626, 1140, 1282, 1446, 1468, 1572, 1594, 1723, 2046
HpyCH4III ACNGT 5 cut(s) 300, 359, 1046, 1895, 2053
HpyCH4IV ACGT 2 cut(s) 701, 1126
HpySE526I ACGT 2 cut(s) 701, 1126
Hsp92II CATG 6 cut(s) 309, 585, 695, 1300, 1424, 1550
HspAI GCGC 1 cut(s) 949
Kpn2I TCCGGA 2 cut(s) 753, 1036
KpnI GGTACC 1 cut(s) 1530
Ksp22I TGATCA 1 cut(s) 624
KspAI GTTAAC 1 cut(s) 682
Kzo9I GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
LguI GCTCTTC 1 cut(s) 1425
LmnI GCTCC 3 cut(s) 1094, 1149, 1921
Lsp1109I GCAGC 2 cut(s) 1235, 1279
LweI GCATC 7 cut(s) 1072, 1395, 1454, 1492, 1501, 1709, 1888
MaeI CTAG 5 cut(s) 380, 840, 920, 1263, 1914
MaeII ACGT 2 cut(s) 701, 1126
MaeIII GTNAC 6 cut(s) 83, 139, 446, 1046, 1119, 2053
MalI GATC 9 cut(s) 181, 386, 626, 657, 890, 1004, 1035, 1170, 1412
MboI GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
MboII GAAGA 8 cut(s) 489, 606, 1012, 1407, 1442, 1466, 1877, 2036
MfeI CAATTG 2 cut(s) 66, 1386
MflI RGATCY 5 cut(s) 655, 888, 1002, 1168, 1410
MhlI GDGCHC 5 cut(s) 238, 976, 1154, 1216, 1889
MlyI GAGTC 5 cut(s) 487, 503, 759, 1145, 1333
MmeI TCCRAC 1 cut(s) 1781
MroI TCCGGA 2 cut(s) 753, 1036
MroXI GAANNNNTTC 1 cut(s) 615
MseI TTAA 5 cut(s) 96, 539, 681, 824, 906
MslI CAYNNNNRTG 3 cut(s) 135, 1425, 1551
MspA1I CMGCKG 1 cut(s) 622
MspI CCGG 4 cut(s) 754, 1037, 1051, 2045
MspR9I CCNGG 3 cut(s) 204, 1052, 2021
MunI CAATTG 2 cut(s) 66, 1386
Mva1269I GAATGC 2 cut(s) 1938, 1982
MvaI CCWGG 2 cut(s) 204, 2021
MvnI CGCG 2 cut(s) 443, 1357
NciI CCSGG 1 cut(s) 1052
NcoI CCATGG 3 cut(s) 581, 1296, 1546
NdeI CATATG 2 cut(s) 163, 1722
NdeII GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
NlaIII CATG 6 cut(s) 309, 585, 695, 1300, 1424, 1550
NlaIV GGNNCC 8 cut(s) 657, 1151, 1170, 1528, 1657, 1689, 1789, 2005
NmeAIII GCCGAG 1 cut(s) 1396
NmuCI GTSAC 3 cut(s) 83, 1046, 1119
NsbI TGCGCA 1 cut(s) 950
NspI RCATGY 1 cut(s) 695
PaeR7I CTCGAG 1 cut(s) 1335
PciSI GCTCTTC 1 cut(s) 1425
PctI GAATGC 2 cut(s) 1938, 1982
PdmI GAANNNNTTC 1 cut(s) 615
PfeI GAWTC 6 cut(s) 473, 509, 878, 1391, 1931, 2015
PkrI GCNGC 3 cut(s) 777, 1225, 1294
PleI GAGTC 5 cut(s) 486, 502, 758, 1144, 1332
PpsI GAGTC 5 cut(s) 486, 502, 758, 1144, 1332
Ppu21I YACGTR 1 cut(s) 1127
PpuMI RGGWCCY 2 cut(s) 1687, 1819
Psp124BI GAGCTC 1 cut(s) 1889
Psp5II RGGWCCY 2 cut(s) 1687, 1819
Psp6I CCWGG 2 cut(s) 202, 2019
PspEI GGTNACC 1 cut(s) 1119
PspFI CCCAGC 1 cut(s) 1607
PspGI CCWGG 2 cut(s) 202, 2019
PspN4I GGNNCC 8 cut(s) 657, 1151, 1170, 1528, 1657, 1689, 1789, 2005
PspPI GGNCC 4 cut(s) 1687, 1754, 1819, 2004
PspPPI RGGWCCY 2 cut(s) 1687, 1819
PspXI VCTCGAGB 1 cut(s) 1335
PsrI GAACNNNNNNTAC 2 cut(s) 699, 731
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 5 cut(s) 655, 888, 1002, 1168, 1410
PvuII CAGCTG 1 cut(s) 622
RsaI GTAC 6 cut(s) 171, 226, 341, 1043, 1528, 2091
RsaNI GTAC 6 cut(s) 170, 225, 340, 1042, 1527, 2090
RseI CAYNNNNRTG 3 cut(s) 135, 1425, 1551
SacI GAGCTC 1 cut(s) 1889
SapI GCTCTTC 1 cut(s) 1425
SaqAI TTAA 5 cut(s) 96, 539, 681, 824, 906
SatI GCNGC 3 cut(s) 776, 1224, 1293
Sau3AI GATC 9 cut(s) 179, 384, 624, 655, 888, 1002, 1033, 1168, 1410
Sau96I GGNCC 4 cut(s) 1687, 1754, 1819, 2004
ScaI AGTACT 1 cut(s) 171
SchI GAGTC 5 cut(s) 487, 503, 759, 1145, 1333
ScrFI CCNGG 3 cut(s) 204, 1052, 2021
SduI GDGCHC 5 cut(s) 238, 976, 1154, 1216, 1889
SfaNI GCATC 7 cut(s) 1072, 1395, 1454, 1492, 1501, 1709, 1888
SfcI CTRYAG 1 cut(s) 1395
Sfr274I CTCGAG 1 cut(s) 1335
SinI GGWCC 4 cut(s) 1687, 1754, 1819, 2004
SlaI CTCGAG 1 cut(s) 1335
SmiMI CAYNNNNRTG 3 cut(s) 135, 1425, 1551
SmlI CTYRAG 3 cut(s) 986, 1304, 1335
SmoI CTYRAG 3 cut(s) 986, 1304, 1335
SpeI ACTAGT 1 cut(s) 379
SsiI CCGC 2 cut(s) 443, 775
SspI AATATT 1 cut(s) 1076
SspMI CTAG 5 cut(s) 380, 840, 920, 1263, 1914
SstI GAGCTC 1 cut(s) 1889
StyD4I CCNGG 3 cut(s) 202, 1050, 2019
StyI CCWWGG 6 cut(s) 368, 581, 685, 1296, 1546, 1822
TaaI ACNGT 5 cut(s) 300, 359, 1046, 1895, 2053
TaiI ACGT 2 cut(s) 704, 1129
TaqI TCGA 4 cut(s) 476, 1336, 1703, 2071
TaqII GACCGA 1 cut(s) 1371
TatI WGTACW 1 cut(s) 169
TauI GCSGC 1 cut(s) 778
TfiI GAWTC 6 cut(s) 473, 509, 878, 1391, 1931, 2015
Tru1I TTAA 5 cut(s) 96, 539, 681, 824, 906
Tru9I TTAA 5 cut(s) 96, 539, 681, 824, 906
TscAI CASTG 1 cut(s) 1900
TseFI GTSAC 3 cut(s) 83, 1046, 1119
TseI GCWGC 2 cut(s) 1223, 1292
Tsp45I GTSAC 3 cut(s) 83, 1046, 1119
TspGWI ACGGA 1 cut(s) 1899
TspRI CASTG 1 cut(s) 1900
VpaK11BI GGWCC 4 cut(s) 1687, 1754, 1819, 2004
XbaI TCTAGA 2 cut(s) 839, 919
XceI RCATGY 1 cut(s) 695
XhoI CTCGAG 1 cut(s) 1335
XmiI GTMKAC 1 cut(s) 376
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 5 cut(s) 380, 840, 920, 1263, 1914
ZrmI AGTACT 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.