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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1259200.v1.1 MD09G1259400.v1.1 |
| prunus_persica | Prupe.3G151000_v2.0.a1 |
| pyrus_communis | pycom09g17410 |
| rosa_laevigata | RLG00000022699 |
| rosa_roxburghii | Rroxscaffold_6G00391400 |
| rosa_rugosa | Rorug03G0263300 |
| rosa_samantha | Rh3AG312100 Rh3BG348000 Rh3DG348200 |
| rosa_wichuraiana | Rw3G027380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 58, 98, 139 |
| AcsI | RAATTY | 1 cut(s) | 154 |
| AfaI | GTAC | 2 cut(s) | 45, 76 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 370 |
| AflII | CTTAAG | 1 cut(s) | 188 |
| AgsI | TTSAA | 1 cut(s) | 394 |
| AjnI | CCWGG | 2 cut(s) | 253, 369 |
| AluBI | AGCT | 3 cut(s) | 107, 114, 307 |
| AluI | AGCT | 3 cut(s) | 107, 114, 307 |
| Alw21I | GWGCWC | 2 cut(s) | 109, 309 |
| Alw26I | GTCTC | 1 cut(s) | 196 |
| AlwI | GGATC | 3 cut(s) | 58, 98, 139 |
| ApoI | RAATTY | 1 cut(s) | 154 |
| BanII | GRGCYC | 2 cut(s) | 109, 309 |
| BbsI | GAAGAC | 1 cut(s) | 74 |
| Bbv12I | GWGCWC | 2 cut(s) | 109, 309 |
| BccI | CCATC | 2 cut(s) | 58, 172 |
| BciT130I | CCWGG | 2 cut(s) | 255, 371 |
| BcoDI | GTCTC | 1 cut(s) | 196 |
| BfrI | CTTAAG | 1 cut(s) | 188 |
| BmcAI | AGTACT | 1 cut(s) | 76 |
| Bme1390I | CCNGG | 2 cut(s) | 255, 371 |
| BmrFI | CCNGG | 2 cut(s) | 255, 371 |
| BmsI | GCATC | 1 cut(s) | 139 |
| BpiI | GAAGAC | 1 cut(s) | 74 |
| BpuEI | CTTGAG | 1 cut(s) | 227 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 370 |
| BseBI | CCWGG | 2 cut(s) | 255, 371 |
| BseGI | GGATG | 1 cut(s) | 154 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 370 |
| BseMII | CTCAG | 2 cut(s) | 122, 286 |
| BsiHKAI | GWGCWC | 2 cut(s) | 109, 309 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 370 |
| BsmAI | GTCTC | 1 cut(s) | 196 |
| Bsp1286I | GDGCHC | 2 cut(s) | 109, 309 |
| Bsp1407I | TGTACA | 1 cut(s) | 43 |
| Bsp143I | GATC | 3 cut(s) | 63, 90, 131 |
| BspCNI | CTCAG | 2 cut(s) | 121, 285 |
| BspPI | GGATC | 3 cut(s) | 58, 98, 139 |
| BspTI | CTTAAG | 1 cut(s) | 188 |
| BsrGI | TGTACA | 1 cut(s) | 43 |
| BssMI | GATC | 3 cut(s) | 63, 90, 131 |
| Bst2UI | CCWGG | 2 cut(s) | 255, 371 |
| BstAFI | CTTAAG | 1 cut(s) | 188 |
| BstAUI | TGTACA | 1 cut(s) | 43 |
| BstDEI | CTNAG | 3 cut(s) | 108, 115, 272 |
| BstF5I | GGATG | 1 cut(s) | 154 |
| BstKTI | GATC | 3 cut(s) | 66, 93, 134 |
| BstMAI | GTCTC | 1 cut(s) | 196 |
| BstMBI | GATC | 3 cut(s) | 63, 90, 131 |
| BstNI | CCWGG | 2 cut(s) | 255, 371 |
| BstSCI | CCNGG | 2 cut(s) | 253, 369 |
| BstV2I | GAAGAC | 1 cut(s) | 74 |
| BstX2I | RGATCY | 1 cut(s) | 63 |
| BstYI | RGATCY | 1 cut(s) | 63 |
| BtsCI | GGATG | 1 cut(s) | 154 |
| Csp6I | GTAC | 2 cut(s) | 44, 75 |
| CviAII | CATG | 1 cut(s) | 94 |
| CviJI | RGCY | 5 cut(s) | 11, 49, 107, 114, 307 |
| CviKI_1 | RGCY | 5 cut(s) | 11, 49, 107, 114, 307 |
| CviQI | GTAC | 2 cut(s) | 44, 75 |
| DdeI | CTNAG | 3 cut(s) | 108, 115, 272 |
| DpnI | GATC | 3 cut(s) | 65, 92, 133 |
| DpnII | GATC | 3 cut(s) | 63, 90, 131 |
| Ecl136II | GAGCTC | 2 cut(s) | 107, 307 |
| Eco24I | GRGCYC | 2 cut(s) | 109, 309 |
| Eco53kI | GAGCTC | 2 cut(s) | 107, 307 |
| EcoICRI | GAGCTC | 2 cut(s) | 107, 307 |
| EcoRII | CCWGG | 2 cut(s) | 253, 369 |
| EcoT38I | GRGCYC | 2 cut(s) | 109, 309 |
| FaeI | CATG | 1 cut(s) | 97 |
| FaiI | YATR | 4 cut(s) | 59, 95, 261, 311 |
| FatI | CATG | 1 cut(s) | 93 |
| FokI | GGATG | 1 cut(s) | 161 |
| FriOI | GRGCYC | 2 cut(s) | 109, 309 |
| Hin1II | CATG | 1 cut(s) | 97 |
| HinfI | GANTC | 2 cut(s) | 328, 394 |
| Hpy188I | TCNGA | 2 cut(s) | 111, 275 |
| HpyAV | CCTTC | 2 cut(s) | 36, 119 |
| HpyCH4IV | ACGT | 1 cut(s) | 313 |
| HpyCH4V | TGCA | 3 cut(s) | 97, 152, 267 |
| HpyF3I | CTNAG | 3 cut(s) | 108, 115, 272 |
| HpySE526I | ACGT | 1 cut(s) | 313 |
| Hsp92II | CATG | 1 cut(s) | 97 |
| Kzo9I | GATC | 3 cut(s) | 63, 90, 131 |
| LpnPI | CCDG | 5 cut(s) | 240, 267, 355, 356, 383 |
| LweI | GCATC | 1 cut(s) | 139 |
| MaeII | ACGT | 1 cut(s) | 313 |
| MaeIII | GTNAC | 2 cut(s) | 35, 325 |
| MalI | GATC | 3 cut(s) | 65, 92, 133 |
| MboI | GATC | 3 cut(s) | 63, 90, 131 |
| MboII | GAAGA | 5 cut(s) | 6, 9, 74, 134, 187 |
| MflI | RGATCY | 1 cut(s) | 63 |
| MhlI | GDGCHC | 2 cut(s) | 109, 309 |
| MluCI | AATT | 3 cut(s) | 154, 244, 262 |
| MlyI | GAGTC | 1 cut(s) | 322 |
| MmeI | TCCRAC | 1 cut(s) | 221 |
| MnlI | CCTC | 2 cut(s) | 189, 280 |
| MseI | TTAA | 2 cut(s) | 167, 189 |
| MspCI | CTTAAG | 1 cut(s) | 188 |
| MspR9I | CCNGG | 2 cut(s) | 255, 371 |
| MvaI | CCWGG | 2 cut(s) | 255, 371 |
| NdeII | GATC | 3 cut(s) | 63, 90, 131 |
| NlaIII | CATG | 1 cut(s) | 97 |
| NmuCI | GTSAC | 1 cut(s) | 325 |
| PfeI | GAWTC | 1 cut(s) | 394 |
| PleI | GAGTC | 1 cut(s) | 322 |
| PpsI | GAGTC | 1 cut(s) | 322 |
| Psp124BI | GAGCTC | 2 cut(s) | 109, 309 |
| Psp6I | CCWGG | 2 cut(s) | 253, 369 |
| PspGI | CCWGG | 2 cut(s) | 253, 369 |
| PsuI | RGATCY | 1 cut(s) | 63 |
| RsaI | GTAC | 2 cut(s) | 45, 76 |
| RsaNI | GTAC | 2 cut(s) | 44, 75 |
| SacI | GAGCTC | 2 cut(s) | 109, 309 |
| SaqAI | TTAA | 2 cut(s) | 167, 189 |
| Sau3AI | GATC | 3 cut(s) | 63, 90, 131 |
| ScaI | AGTACT | 1 cut(s) | 76 |
| SchI | GAGTC | 1 cut(s) | 322 |
| ScrFI | CCNGG | 2 cut(s) | 255, 371 |
| SduI | GDGCHC | 2 cut(s) | 109, 309 |
| SetI | ASST | 9 cut(s) | 28, 42, 109, 116, 130, 291, 309, 316, 344 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SmlI | CTYRAG | 2 cut(s) | 188, 206 |
| SmoI | CTYRAG | 2 cut(s) | 188, 206 |
| Sse9I | AATT | 3 cut(s) | 154, 244, 262 |
| SspI | AATATT | 2 cut(s) | 142, 215 |
| SstI | GAGCTC | 2 cut(s) | 109, 309 |
| StyD4I | CCNGG | 2 cut(s) | 253, 369 |
| TaiI | ACGT | 1 cut(s) | 316 |
| TasI | AATT | 3 cut(s) | 154, 244, 262 |
| TatI | WGTACW | 2 cut(s) | 43, 74 |
| TfiI | GAWTC | 1 cut(s) | 394 |
| Tru1I | TTAA | 2 cut(s) | 167, 189 |
| Tru9I | TTAA | 2 cut(s) | 167, 189 |
| TseFI | GTSAC | 1 cut(s) | 325 |
| Tsp45I | GTSAC | 1 cut(s) | 325 |
| TspDTI | ATGAA | 2 cut(s) | 135, 377 |
| TspGWI | ACGGA | 1 cut(s) | 56 |
| Vha464I | CTTAAG | 1 cut(s) | 188 |
| XapI | RAATTY | 1 cut(s) | 154 |
| ZrmI | AGTACT | 1 cut(s) | 76 |