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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1259200.v1.1 MD09G1259400.v1.1 |
| prunus_persica | Prupe.3G151000_v2.0.a1 |
| pyrus_communis | pycom09g17410 |
| rosa_laevigata | RLG00000022699 |
| rosa_roxburghii | Rroxscaffold_6G00391400 |
| rosa_rugosa | Rorug03G0263300 |
| rosa_samantha | Rh3AG312100 Rh3BG348000 Rh3DG348200 |
| rosa_wichuraiana | Rw3G027380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 96 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 52 |
| AgsI | TTSAA | 3 cut(s) | 109, 213, 484 |
| AluBI | AGCT | 1 cut(s) | 384 |
| AluI | AGCT | 1 cut(s) | 384 |
| Alw26I | GTCTC | 2 cut(s) | 256, 382 |
| AoxI | GGCC | 2 cut(s) | 405, 448 |
| ApeKI | GCWGC | 3 cut(s) | 117, 189, 192 |
| AspS9I | GGNCC | 1 cut(s) | 43 |
| AsuC2I | CCSGG | 1 cut(s) | 325 |
| AsuHPI | GGTGA | 3 cut(s) | 34, 281, 481 |
| AvaII | GGWCC | 1 cut(s) | 43 |
| BbvI | GCAGC | 3 cut(s) | 129, 201, 204 |
| BclI | TGATCA | 1 cut(s) | 141 |
| BcnI | CCSGG | 1 cut(s) | 325 |
| BcoDI | GTCTC | 2 cut(s) | 256, 382 |
| BisI | GCNGC | 3 cut(s) | 118, 190, 193 |
| BlsI | GCNGC | 3 cut(s) | 119, 191, 194 |
| Bme1390I | CCNGG | 1 cut(s) | 325 |
| Bme18I | GGWCC | 1 cut(s) | 43 |
| BmgT120I | GGNCC | 1 cut(s) | 43 |
| BmrFI | CCNGG | 1 cut(s) | 325 |
| BpuEI | CTTGAG | 2 cut(s) | 287, 364 |
| BpuMI | CCSGG | 1 cut(s) | 325 |
| BsaI | GGTCTC | 1 cut(s) | 382 |
| BsaWI | WCCGGW | 2 cut(s) | 52, 91 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 52 |
| Bse1I | ACTGG | 2 cut(s) | 249, 471 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BseMII | CTCAG | 1 cut(s) | 361 |
| BseNI | ACTGG | 2 cut(s) | 249, 471 |
| BseXI | GCAGC | 3 cut(s) | 129, 201, 204 |
| BshFI | GGCC | 2 cut(s) | 407, 450 |
| BsiSI | CCGG | 3 cut(s) | 53, 92, 324 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 52 |
| BsmAI | GTCTC | 2 cut(s) | 256, 382 |
| BsnI | GGCC | 2 cut(s) | 407, 450 |
| Bso31I | GGTCTC | 1 cut(s) | 382 |
| Bsp143I | GATC | 3 cut(s) | 3, 141, 179 |
| BspANI | GGCC | 2 cut(s) | 407, 450 |
| BspCNI | CTCAG | 1 cut(s) | 360 |
| BspTNI | GGTCTC | 1 cut(s) | 382 |
| BsrI | ACTGG | 2 cut(s) | 249, 471 |
| BssMI | GATC | 3 cut(s) | 3, 141, 179 |
| Bst4CI | ACNGT | 5 cut(s) | 14, 22, 30, 293, 308 |
| BstDEI | CTNAG | 2 cut(s) | 227, 347 |
| BstKTI | GATC | 3 cut(s) | 6, 144, 182 |
| BstMAI | GTCTC | 2 cut(s) | 256, 382 |
| BstMBI | GATC | 3 cut(s) | 3, 141, 179 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 390 |
| BstSCI | CCNGG | 1 cut(s) | 323 |
| BstV1I | GCAGC | 3 cut(s) | 129, 201, 204 |
| BsuRI | GGCC | 2 cut(s) | 407, 450 |
| BtsIMutI | CAGTG | 1 cut(s) | 464 |
| Cfr13I | GGNCC | 1 cut(s) | 43 |
| Csp6I | GTAC | 1 cut(s) | 95 |
| CviAII | CATG | 1 cut(s) | 145 |
| CviJI | RGCY | 7 cut(s) | 62, 100, 158, 165, 384, 407, 450 |
| CviKI_1 | RGCY | 7 cut(s) | 62, 100, 158, 165, 384, 407, 450 |
| CviQI | GTAC | 1 cut(s) | 95 |
| DdeI | CTNAG | 2 cut(s) | 227, 347 |
| DpnI | GATC | 3 cut(s) | 5, 143, 181 |
| DpnII | GATC | 3 cut(s) | 3, 141, 179 |
| Eco31I | GGTCTC | 1 cut(s) | 382 |
| Eco47I | GGWCC | 1 cut(s) | 43 |
| FaeI | CATG | 1 cut(s) | 148 |
| FatI | CATG | 1 cut(s) | 144 |
| FbaI | TGATCA | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 3 cut(s) | 118, 190, 193 |
| Fsp4HI | GCNGC | 3 cut(s) | 118, 190, 193 |
| GluI | GCNGC | 3 cut(s) | 118, 190, 193 |
| HaeIII | GGCC | 2 cut(s) | 407, 450 |
| HapII | CCGG | 3 cut(s) | 53, 92, 324 |
| Hin1II | CATG | 1 cut(s) | 148 |
| HindIII | AAGCTT | 1 cut(s) | 382 |
| HinfI | GANTC | 2 cut(s) | 209, 484 |
| HpaII | CCGG | 3 cut(s) | 53, 92, 324 |
| HphI | GGTGA | 3 cut(s) | 34, 281, 481 |
| Hpy166II | GTNNAC | 2 cut(s) | 33, 46 |
| Hpy188I | TCNGA | 1 cut(s) | 350 |
| Hpy188III | TCNNGA | 1 cut(s) | 296 |
| Hpy8I | GTNNAC | 2 cut(s) | 33, 46 |
| Hpy99I | CGWCG | 2 cut(s) | 132, 173 |
| HpyCH4III | ACNGT | 5 cut(s) | 14, 22, 30, 293, 308 |
| HpyCH4IV | ACGT | 1 cut(s) | 400 |
| HpyCH4V | TGCA | 2 cut(s) | 148, 356 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 390 |
| HpyF3I | CTNAG | 2 cut(s) | 227, 347 |
| HpySE526I | ACGT | 1 cut(s) | 400 |
| Hsp92II | CATG | 1 cut(s) | 148 |
| Ksp22I | TGATCA | 1 cut(s) | 141 |
| Kzo9I | GATC | 3 cut(s) | 3, 141, 179 |
| LpnPI | CCDG | 7 cut(s) | 66, 105, 181, 230, 337, 389, 452 |
| Lsp1109I | GCAGC | 3 cut(s) | 129, 201, 204 |
| MaeII | ACGT | 1 cut(s) | 400 |
| MaeIII | GTNAC | 1 cut(s) | 14 |
| MalI | GATC | 3 cut(s) | 5, 143, 181 |
| MboI | GATC | 3 cut(s) | 3, 141, 179 |
| MboII | GAAGA | 2 cut(s) | 57, 185 |
| MluCI | AATT | 2 cut(s) | 272, 313 |
| MmeI | TCCRAC | 1 cut(s) | 290 |
| MnlI | CCTC | 6 cut(s) | 176, 249, 290, 367, 404, 418 |
| MseI | TTAA | 2 cut(s) | 249, 474 |
| MspI | CCGG | 3 cut(s) | 53, 92, 324 |
| MspR9I | CCNGG | 1 cut(s) | 325 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 390 |
| NciI | CCSGG | 1 cut(s) | 325 |
| NdeII | GATC | 3 cut(s) | 3, 141, 179 |
| NlaIII | CATG | 1 cut(s) | 148 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 397 |
| PfeI | GAWTC | 2 cut(s) | 209, 484 |
| PkrI | GCNGC | 3 cut(s) | 119, 191, 194 |
| PspPI | GGNCC | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 96 |
| RsaNI | GTAC | 1 cut(s) | 95 |
| SaqAI | TTAA | 2 cut(s) | 249, 474 |
| SatI | GCNGC | 3 cut(s) | 118, 190, 193 |
| Sau3AI | GATC | 3 cut(s) | 3, 141, 179 |
| Sau96I | GGNCC | 1 cut(s) | 43 |
| ScrFI | CCNGG | 1 cut(s) | 325 |
| SetI | ASST | 4 cut(s) | 45, 378, 386, 403 |
| SinI | GGWCC | 1 cut(s) | 43 |
| SmlI | CTYRAG | 2 cut(s) | 266, 379 |
| SmoI | CTYRAG | 2 cut(s) | 266, 379 |
| Sse9I | AATT | 2 cut(s) | 272, 313 |
| SspI | AATATT | 2 cut(s) | 88, 124 |
| StyD4I | CCNGG | 1 cut(s) | 323 |
| TaaI | ACNGT | 5 cut(s) | 14, 22, 30, 293, 308 |
| TaiI | ACGT | 1 cut(s) | 403 |
| TaqI | TCGA | 1 cut(s) | 168 |
| TasI | AATT | 2 cut(s) | 272, 313 |
| TfiI | GAWTC | 2 cut(s) | 209, 484 |
| Tru1I | TTAA | 2 cut(s) | 249, 474 |
| Tru9I | TTAA | 2 cut(s) | 249, 474 |
| TscAI | CASTG | 1 cut(s) | 471 |
| TseI | GCWGC | 3 cut(s) | 117, 189, 192 |
| TspDTI | ATGAA | 1 cut(s) | 149 |
| TspRI | CASTG | 1 cut(s) | 471 |
| VpaK11BI | GGWCC | 1 cut(s) | 43 |