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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1259200.v1.1 MD09G1259400.v1.1 |
| prunus_persica | Prupe.3G151000_v2.0.a1 |
| pyrus_communis | pycom09g17410 |
| rosa_laevigata | RLG00000022699 |
| rosa_roxburghii | Rroxscaffold_6G00391400 |
| rosa_rugosa | Rorug03G0263300 |
| rosa_samantha | Rh3AG312100 Rh3BG348000 Rh3DG348200 |
| rosa_wichuraiana | Rw3G027380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 323 |
| AciI | CCGC | 1 cut(s) | 323 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AgsI | TTSAA | 3 cut(s) | 52, 156, 433 |
| AhlI | ACTAGT | 1 cut(s) | 187 |
| AluBI | AGCT | 2 cut(s) | 108, 333 |
| AluI | AGCT | 2 cut(s) | 108, 333 |
| Alw26I | GTCTC | 2 cut(s) | 199, 331 |
| AoxI | GGCC | 1 cut(s) | 354 |
| ApeKI | GCWGC | 4 cut(s) | 57, 60, 132, 135 |
| AspLEI | GCGC | 1 cut(s) | 57 |
| AsuC2I | CCSGG | 1 cut(s) | 268 |
| AsuHPI | GGTGA | 1 cut(s) | 430 |
| BbvI | GCAGC | 4 cut(s) | 69, 72, 144, 147 |
| BclI | TGATCA | 1 cut(s) | 84 |
| BcnI | CCSGG | 1 cut(s) | 268 |
| BcoDI | GTCTC | 2 cut(s) | 199, 331 |
| BcuI | ACTAGT | 1 cut(s) | 187 |
| BfaI | CTAG | 1 cut(s) | 188 |
| BisI | GCNGC | 4 cut(s) | 58, 61, 133, 136 |
| BlsI | GCNGC | 4 cut(s) | 59, 62, 134, 137 |
| Bme1390I | CCNGG | 1 cut(s) | 268 |
| BmrFI | CCNGG | 1 cut(s) | 268 |
| BpuEI | CTTGAG | 2 cut(s) | 230, 313 |
| BpuMI | CCSGG | 1 cut(s) | 268 |
| BsaI | GGTCTC | 1 cut(s) | 331 |
| Bse1I | ACTGG | 2 cut(s) | 35, 420 |
| BseMII | CTCAG | 1 cut(s) | 304 |
| BseNI | ACTGG | 2 cut(s) | 35, 420 |
| BseXI | GCAGC | 4 cut(s) | 69, 72, 144, 147 |
| BshFI | GGCC | 1 cut(s) | 356 |
| BsiSI | CCGG | 1 cut(s) | 267 |
| BsmAI | GTCTC | 2 cut(s) | 199, 331 |
| BsnI | GGCC | 1 cut(s) | 356 |
| Bso31I | GGTCTC | 1 cut(s) | 331 |
| Bsp143I | GATC | 2 cut(s) | 84, 122 |
| BspACI | CCGC | 1 cut(s) | 323 |
| BspANI | GGCC | 1 cut(s) | 356 |
| BspCNI | CTCAG | 1 cut(s) | 303 |
| BspTNI | GGTCTC | 1 cut(s) | 331 |
| BsrBI | CCGCTC | 1 cut(s) | 323 |
| BsrI | ACTGG | 2 cut(s) | 35, 420 |
| BssMI | GATC | 2 cut(s) | 84, 122 |
| Bst4CI | ACNGT | 1 cut(s) | 251 |
| BstDEI | CTNAG | 2 cut(s) | 170, 290 |
| BstHHI | GCGC | 1 cut(s) | 57 |
| BstKTI | GATC | 2 cut(s) | 87, 125 |
| BstMAI | GTCTC | 2 cut(s) | 199, 331 |
| BstMBI | GATC | 2 cut(s) | 84, 122 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 339 |
| BstSCI | CCNGG | 1 cut(s) | 266 |
| BstV1I | GCAGC | 4 cut(s) | 69, 72, 144, 147 |
| BsuRI | GGCC | 1 cut(s) | 356 |
| BtsIMutI | CAGTG | 1 cut(s) | 413 |
| CfoI | GCGC | 1 cut(s) | 57 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 1 cut(s) | 88 |
| CviJI | RGCY | 7 cut(s) | 5, 43, 101, 108, 333, 356, 399 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 43, 101, 108, 333, 356, 399 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DdeI | CTNAG | 2 cut(s) | 170, 290 |
| DpnI | GATC | 2 cut(s) | 86, 124 |
| DpnII | GATC | 2 cut(s) | 84, 122 |
| Eco31I | GGTCTC | 1 cut(s) | 331 |
| FaeI | CATG | 1 cut(s) | 91 |
| FatI | CATG | 1 cut(s) | 87 |
| FbaI | TGATCA | 1 cut(s) | 84 |
| Fnu4HI | GCNGC | 4 cut(s) | 58, 61, 133, 136 |
| Fsp4HI | GCNGC | 4 cut(s) | 58, 61, 133, 136 |
| FspBI | CTAG | 1 cut(s) | 188 |
| GlaI | GCGC | 1 cut(s) | 56 |
| GluI | GCNGC | 4 cut(s) | 58, 61, 133, 136 |
| HaeIII | GGCC | 1 cut(s) | 356 |
| HapII | CCGG | 1 cut(s) | 267 |
| HhaI | GCGC | 1 cut(s) | 57 |
| Hin1II | CATG | 1 cut(s) | 91 |
| Hin6I | GCGC | 1 cut(s) | 55 |
| HinP1I | GCGC | 1 cut(s) | 55 |
| HindIII | AAGCTT | 1 cut(s) | 331 |
| HinfI | GANTC | 1 cut(s) | 152 |
| HpaII | CCGG | 1 cut(s) | 267 |
| HphI | GGTGA | 1 cut(s) | 430 |
| Hpy188I | TCNGA | 1 cut(s) | 293 |
| Hpy188III | TCNNGA | 1 cut(s) | 239 |
| Hpy99I | CGWCG | 2 cut(s) | 75, 116 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4III | ACNGT | 1 cut(s) | 251 |
| HpyCH4IV | ACGT | 1 cut(s) | 349 |
| HpyCH4V | TGCA | 2 cut(s) | 91, 299 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 339 |
| HpyF3I | CTNAG | 2 cut(s) | 170, 290 |
| HpySE526I | ACGT | 1 cut(s) | 349 |
| Hsp92II | CATG | 1 cut(s) | 91 |
| HspAI | GCGC | 1 cut(s) | 55 |
| Ksp22I | TGATCA | 1 cut(s) | 84 |
| Kzo9I | GATC | 2 cut(s) | 84, 122 |
| LpnPI | CCDG | 5 cut(s) | 48, 124, 280, 338, 401 |
| Lsp1109I | GCAGC | 4 cut(s) | 69, 72, 144, 147 |
| MaeI | CTAG | 1 cut(s) | 188 |
| MaeII | ACGT | 1 cut(s) | 349 |
| MalI | GATC | 2 cut(s) | 86, 124 |
| MbiI | CCGCTC | 1 cut(s) | 323 |
| MboI | GATC | 2 cut(s) | 84, 122 |
| MboII | GAAGA | 1 cut(s) | 132 |
| MluCI | AATT | 3 cut(s) | 215, 256, 433 |
| MmeI | TCCRAC | 1 cut(s) | 233 |
| MnlI | CCTC | 3 cut(s) | 192, 353, 367 |
| MseI | TTAA | 3 cut(s) | 192, 423, 436 |
| MspI | CCGG | 1 cut(s) | 267 |
| MspR9I | CCNGG | 1 cut(s) | 268 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 339 |
| NciI | CCSGG | 1 cut(s) | 268 |
| NdeII | GATC | 2 cut(s) | 84, 122 |
| NlaIII | CATG | 1 cut(s) | 91 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 346 |
| PfeI | GAWTC | 1 cut(s) | 152 |
| PkrI | GCNGC | 4 cut(s) | 59, 62, 134, 137 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| SaqAI | TTAA | 3 cut(s) | 192, 423, 436 |
| SatI | GCNGC | 4 cut(s) | 58, 61, 133, 136 |
| Sau3AI | GATC | 2 cut(s) | 84, 122 |
| ScrFI | CCNGG | 1 cut(s) | 268 |
| SetI | ASST | 3 cut(s) | 110, 335, 352 |
| SmlI | CTYRAG | 2 cut(s) | 209, 328 |
| SmoI | CTYRAG | 2 cut(s) | 209, 328 |
| SpeI | ACTAGT | 1 cut(s) | 187 |
| Sse9I | AATT | 3 cut(s) | 215, 256, 433 |
| SsiI | CCGC | 1 cut(s) | 323 |
| SspI | AATATT | 2 cut(s) | 31, 67 |
| SspMI | CTAG | 1 cut(s) | 188 |
| StyD4I | CCNGG | 1 cut(s) | 266 |
| TaaI | ACNGT | 1 cut(s) | 251 |
| TaiI | ACGT | 1 cut(s) | 352 |
| TaqI | TCGA | 1 cut(s) | 111 |
| TasI | AATT | 3 cut(s) | 215, 256, 433 |
| TatI | WGTACW | 1 cut(s) | 37 |
| TfiI | GAWTC | 1 cut(s) | 152 |
| Tru1I | TTAA | 3 cut(s) | 192, 423, 436 |
| Tru9I | TTAA | 3 cut(s) | 192, 423, 436 |
| TscAI | CASTG | 1 cut(s) | 420 |
| TseI | GCWGC | 4 cut(s) | 57, 60, 132, 135 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspRI | CASTG | 1 cut(s) | 420 |
| XspI | CTAG | 1 cut(s) | 188 |