pycom10g04260

glutamine amidotransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
4497410 .. 4501667
4258 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g04260.4

Sequence Viewer

Length: 732 bp
ATGGGTGGGAAGAAATTTGCAGTGCTTCTGTGCGCAGAGGACACGGAGTTTGTGAAGAAGACGTACGGGGGGTATTTTGGGGTGTTTCTGAGAATGCTGGCGGAGGAGGGGGAGACGTGGGACTTGTACCGGGTGGCGCGCGGCGAGTTTCCGGAGGACGATGAGATTGAAAGCTACGATGGGTTTGTGATATCCGGAAGCAGCAGGGATGCCCACGGCAATGATGCCTGGATCTGCAGGCTCCTCACCCTCCTCCAGAAATTGGATTCCATCAAGAAAAAGGTTCTCGGCATTTGCTTCGGTCATCAGATATTGAGCCGTGCACTGGGAGGAAAATCTGGTAGAGCCATCACAGGCTGGGATATCGGAATCCGAACCGTCCACTTGTCACCATCATCCAAGGCCTTCTCCTCTCTCAACGTTCCAGCTCTTCTCTCCATATATGAAATCCACCAAGATGAGGTGTGGGAACTTCCTCCCAAGGCAGAGTTGATTGCATGGTCGGATAAGACGGGTGTGGAGATGTTTAAGTATGGAGATCAGATGATGGGCATCCAAGGCCACCCTGAGTACACCAAAGATATTCTTCTCAATCTTATCGATCGCGTTGCCAAACTCGAATACATCTTGGTCTCGGAAGCTGAAGAATTGAAGGCCAAGGTGGAGGCATGTCAACCAGACAGAGAGACATGGAAGAGGGTTTGCAGAAGCTTTCTCAAGGGGGGATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

244

Amino Acids

27.31

Weight (kDa)

5.65

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 34
AccB7I CCANNNNNTGG 1 cut(s) 262
AccII CGCG 3 cut(s) 139, 141, 606
AccIII TCCGGA 2 cut(s) 151, 194
AciI CCGC 2 cut(s) 101, 141
AclI AACGTT 1 cut(s) 420
AclWI GGATC 1 cut(s) 239
AcsI RAATTY 1 cut(s) 14
AcuI CTGAAG 1 cut(s) 663
AfaI GTAC 3 cut(s) 65, 128, 572
AfiI CCNNNNNNNGG 3 cut(s) 262, 325, 460
AgsI TTSAA 2 cut(s) 170, 652
AjiI CACGTC 1 cut(s) 117
AjnI CCWGG 1 cut(s) 227
AluBI AGCT 4 cut(s) 174, 428, 641, 711
AluI AGCT 4 cut(s) 174, 428, 641, 711
Alw21I GWGCWC 1 cut(s) 325
Alw26I GTCTC 3 cut(s) 107, 637, 680
Alw44I GTGCAC 1 cut(s) 321
AlwI GGATC 1 cut(s) 239
Aor13HI TCCGGA 2 cut(s) 151, 194
AoxI GGCC 3 cut(s) 402, 559, 654
ApaLI GTGCAC 1 cut(s) 321
ApeKI GCWGC 1 cut(s) 201
ApoI RAATTY 1 cut(s) 14
ArsI GACNNNNNNTTYG 2 cut(s) 32, 64
AspLEI GCGC 3 cut(s) 35, 139, 141
AsuC2I CCSGG 1 cut(s) 131
AsuHPI GGTGA 2 cut(s) 238, 381
BaeGI GKGCMC 1 cut(s) 325
BarI GAAGNNNNNNTAC 2 cut(s) 47, 79
BbsI GAAGAC 1 cut(s) 65
Bbv12I GWGCWC 1 cut(s) 325
BbvI GCAGC 1 cut(s) 213
BccI CCATC 5 cut(s) 173, 278, 356, 400, 541
BceAI ACGGC 2 cut(s) 232, 303
BcgI CGANNNNNNTGC 4 cut(s) 280, 314, 590, 624
BciT130I CCWGG 1 cut(s) 229
BcnI CCSGG 1 cut(s) 131
BcoDI GTCTC 3 cut(s) 107, 637, 680
BfmI CTRYAG 1 cut(s) 235
BisI GCNGC 2 cut(s) 142, 202
BlsI GCNGC 2 cut(s) 143, 203
Bme1390I CCNGG 2 cut(s) 131, 229
BmgBI CACGTC 1 cut(s) 117
BmiI GGNNCC 1 cut(s) 242
BmrFI CCNGG 2 cut(s) 131, 229
BmrI ACTGGG 1 cut(s) 335
BmsI GCATC 3 cut(s) 199, 214, 561
BmuI ACTGGG 1 cut(s) 335
BpiI GAAGAC 1 cut(s) 65
BpmI CTGGAG 1 cut(s) 239
BpuEI CTTGAG 1 cut(s) 701
BpuMI CCSGG 1 cut(s) 131
Bsa29I ATCGAT 1 cut(s) 600
BsaBI GATNNNNATC 1 cut(s) 551
BsaI GGTCTC 1 cut(s) 637
BsaJI CCNNGG 5 cut(s) 214, 399, 480, 556, 657
BsaWI WCCGGW 2 cut(s) 151, 194
Bsc4I CCNNNNNNNGG 3 cut(s) 262, 325, 460
Bse1I ACTGG 1 cut(s) 330
Bse3DI GCAATG 1 cut(s) 226
Bse8I GATNNNNATC 1 cut(s) 551
BseAI TCCGGA 2 cut(s) 151, 194
BseBI CCWGG 1 cut(s) 229
BseCI ATCGAT 1 cut(s) 600
BseDI CCNNGG 5 cut(s) 214, 399, 480, 556, 657
BseGI GGATG 3 cut(s) 214, 395, 552
BseJI GATNNNNATC 1 cut(s) 551
BseLI CCNNNNNNNGG 3 cut(s) 262, 325, 460
BseMI GCAATG 1 cut(s) 226
BseMII CTCAG 2 cut(s) 80, 558
BseNI ACTGG 1 cut(s) 330
BsePI GCGCGC 1 cut(s) 137
BseRI GAGGAG 4 cut(s) 119, 233, 242, 400
BseSI GKGCMC 1 cut(s) 325
BseXI GCAGC 1 cut(s) 213
BseYI CCCAGC 1 cut(s) 357
Bsh1236I CGCG 3 cut(s) 139, 141, 606
Bsh1285I CGRYCG 1 cut(s) 604
BshFI GGCC 3 cut(s) 404, 561, 656
BshVI ATCGAT 1 cut(s) 600
BsiEI CGRYCG 1 cut(s) 604
BsiHKAI GWGCWC 1 cut(s) 325
BsiSI CCGG 3 cut(s) 130, 152, 195
BsiWI CGTACG 1 cut(s) 63
BslFI GGGAC 1 cut(s) 134
BslI CCNNNNNNNGG 3 cut(s) 262, 325, 460
BsmAI GTCTC 3 cut(s) 107, 637, 680
BsmBI CGTCTC 1 cut(s) 107
BsmFI GGGAC 1 cut(s) 134
BsmI GAATGC 1 cut(s) 99
BsnI GGCC 3 cut(s) 404, 561, 656
Bso31I GGTCTC 1 cut(s) 637
Bsp1286I GDGCHC 1 cut(s) 325
Bsp13I TCCGGA 2 cut(s) 151, 194
Bsp143I GATC 3 cut(s) 231, 538, 601
BspACI CCGC 2 cut(s) 101, 141
BspANI GGCC 3 cut(s) 404, 561, 656
BspCNI CTCAG 2 cut(s) 81, 559
BspDI ATCGAT 1 cut(s) 600
BspEI TCCGGA 2 cut(s) 151, 194
BspFNI CGCG 3 cut(s) 139, 141, 606
BspLI GGNNCC 1 cut(s) 242
BspMAI CTGCAG 1 cut(s) 239
BspPI GGATC 1 cut(s) 239
BspQI GCTCTTC 1 cut(s) 435
BspTNI GGTCTC 1 cut(s) 637
BsrDI GCAATG 1 cut(s) 226
BsrI ACTGG 1 cut(s) 330
BssECI CCNNGG 5 cut(s) 214, 399, 480, 556, 657
BssHII GCGCGC 1 cut(s) 137
BssMI GATC 3 cut(s) 231, 538, 601
BssT1I CCWWGG 4 cut(s) 399, 480, 556, 657
Bst2UI CCWGG 1 cut(s) 229
Bst4CI ACNGT 1 cut(s) 379
Bst6I CTCTTC 2 cut(s) 435, 689
BstC8I GCNNGC 3 cut(s) 99, 139, 239
BstDEI CTNAG 2 cut(s) 89, 567
BstDSI CCRYGG 1 cut(s) 214
BstF5I GGATG 3 cut(s) 214, 395, 552
BstFNI CGCG 3 cut(s) 139, 141, 606
BstHHI GCGC 3 cut(s) 35, 139, 141
BstKTI GATC 3 cut(s) 234, 541, 604
BstMAI GTCTC 3 cut(s) 107, 637, 680
BstMBI GATC 3 cut(s) 231, 538, 601
BstMCI CGRYCG 1 cut(s) 604
BstMWI GCNNNNNNNGC 1 cut(s) 558
BstNI CCWGG 1 cut(s) 229
BstNSI RCATGY 1 cut(s) 672
BstSCI CCNGG 2 cut(s) 129, 227
BstSFI CTRYAG 1 cut(s) 235
BstSLI GKGCMC 1 cut(s) 325
BstUI CGCG 3 cut(s) 139, 141, 606
BstV1I GCAGC 1 cut(s) 213
BstV2I GAAGAC 1 cut(s) 65
BstX2I RGATCY 1 cut(s) 231
BstYI RGATCY 1 cut(s) 231
Bsu15I ATCGAT 1 cut(s) 600
BsuRI GGCC 3 cut(s) 404, 561, 656
BsuTUI ATCGAT 1 cut(s) 600
BtgI CCRYGG 1 cut(s) 214
BtrI CACGTC 1 cut(s) 117
BtsCI GGATG 3 cut(s) 214, 395, 552
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 2 cut(s) 27, 323
Cac8I GCNNGC 3 cut(s) 99, 139, 239
CfoI GCGC 3 cut(s) 35, 139, 141
ClaI ATCGAT 1 cut(s) 600
Csp6I GTAC 3 cut(s) 64, 127, 571
CviAII CATG 3 cut(s) 498, 669, 690
CviQI GTAC 3 cut(s) 64, 127, 571
DdeI CTNAG 2 cut(s) 89, 567
DpnI GATC 3 cut(s) 233, 540, 603
DpnII GATC 3 cut(s) 231, 538, 601
Eam1104I CTCTTC 2 cut(s) 435, 689
EarI CTCTTC 2 cut(s) 435, 689
EciI GGCGGA 1 cut(s) 116
Eco130I CCWWGG 4 cut(s) 399, 480, 556, 657
Eco147I AGGCCT 1 cut(s) 404
Eco31I GGTCTC 1 cut(s) 637
Eco32I GATATC 2 cut(s) 192, 364
Eco57I CTGAAG 1 cut(s) 663
EcoRII CCWGG 1 cut(s) 227
EcoRV GATATC 2 cut(s) 192, 364
EcoT14I CCWWGG 4 cut(s) 399, 480, 556, 657
ErhI CCWWGG 4 cut(s) 399, 480, 556, 657
Esp3I CGTCTC 1 cut(s) 107
FaeI CATG 3 cut(s) 501, 672, 693
FaiI YATR 8 cut(s) 440, 442, 444, 499, 534, 670, 691, 730
FalI AAGNNNNNCTT 2 cut(s) 570, 602
FaqI GGGAC 1 cut(s) 134
FatI CATG 3 cut(s) 497, 668, 689
Fnu4HI GCNGC 2 cut(s) 142, 202
FokI GGATG 3 cut(s) 221, 382, 539
Fsp4HI GCNGC 2 cut(s) 142, 202
FspI TGCGCA 1 cut(s) 34
GlaI GCGC 3 cut(s) 34, 138, 140
GluI GCNGC 2 cut(s) 142, 202
GsaI CCCAGC 1 cut(s) 361
GsuI CTGGAG 1 cut(s) 239
HaeIII GGCC 3 cut(s) 404, 561, 656
HapII CCGG 3 cut(s) 130, 152, 195
HhaI GCGC 3 cut(s) 35, 139, 141
Hin1II CATG 3 cut(s) 501, 672, 693
Hin6I GCGC 3 cut(s) 33, 137, 139
HinP1I GCGC 3 cut(s) 33, 137, 139
HincII GTYRAC 1 cut(s) 674
HindII GTYRAC 1 cut(s) 674
HindIII AAGCTT 1 cut(s) 709
HinfI GANTC 2 cut(s) 266, 369
HpaII CCGG 3 cut(s) 130, 152, 195
HphI GGTGA 2 cut(s) 238, 381
Hpy166II GTNNAC 4 cut(s) 323, 382, 573, 674
Hpy188I TCNGA 7 cut(s) 90, 309, 368, 374, 505, 543, 637
Hpy188III TCNNGA 4 cut(s) 152, 195, 256, 274
Hpy8I GTNNAC 4 cut(s) 323, 382, 573, 674
HpyAV CCTTC 2 cut(s) 415, 646
HpyCH4III ACNGT 1 cut(s) 379
HpyCH4IV ACGT 3 cut(s) 62, 116, 420
HpyCH4V TGCA 5 cut(s) 20, 237, 323, 497, 705
HpyF10VI GCNNNNNNNGC 1 cut(s) 558
HpyF3I CTNAG 2 cut(s) 89, 567
HpySE526I ACGT 3 cut(s) 62, 116, 420
Hsp92II CATG 3 cut(s) 501, 672, 693
HspAI GCGC 3 cut(s) 33, 137, 139
Kpn2I TCCGGA 2 cut(s) 151, 194
Kzo9I GATC 3 cut(s) 231, 538, 601
LguI GCTCTTC 1 cut(s) 435
LmnI GCTCC 1 cut(s) 246
Lsp1109I GCAGC 1 cut(s) 213
LweI GCATC 3 cut(s) 199, 214, 561
MaeII ACGT 3 cut(s) 62, 116, 420
MaeIII GTNAC 1 cut(s) 387
MalI GATC 3 cut(s) 233, 540, 603
MboI GATC 3 cut(s) 231, 538, 601
MboII GAAGA 7 cut(s) 22, 67, 70, 422, 578, 656, 706
MflI RGATCY 1 cut(s) 231
MhlI GDGCHC 1 cut(s) 325
MluCI AATT 3 cut(s) 14, 260, 647
MmeI TCCRAC 1 cut(s) 483
MroI TCCGGA 2 cut(s) 151, 194
MseI TTAA 1 cut(s) 528
MslI CAYNNNNRTG 2 cut(s) 219, 456
MspI CCGG 3 cut(s) 130, 152, 195
MspR9I CCNGG 2 cut(s) 131, 229
Mva1269I GAATGC 1 cut(s) 99
MvaI CCWGG 1 cut(s) 229
MvnI CGCG 3 cut(s) 139, 141, 606
MwoI GCNNNNNNNGC 1 cut(s) 558
NciI CCSGG 1 cut(s) 131
NdeII GATC 3 cut(s) 231, 538, 601
NlaIII CATG 3 cut(s) 501, 672, 693
NlaIV GGNNCC 1 cut(s) 242
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 1 cut(s) 387
NsbI TGCGCA 1 cut(s) 34
NspI RCATGY 1 cut(s) 672
PauI GCGCGC 1 cut(s) 137
PceI AGGCCT 1 cut(s) 404
PciSI GCTCTTC 1 cut(s) 435
PctI GAATGC 1 cut(s) 99
PfeI GAWTC 2 cut(s) 266, 369
Pfl23II CGTACG 1 cut(s) 63
PflMI CCANNNNNTGG 1 cut(s) 262
PkrI GCNGC 2 cut(s) 143, 203
Ple19I CGATCG 1 cut(s) 604
Psp1406I AACGTT 1 cut(s) 420
Psp6I CCWGG 1 cut(s) 227
PspFI CCCAGC 1 cut(s) 357
PspGI CCWGG 1 cut(s) 227
PspLI CGTACG 1 cut(s) 63
PspN4I GGNNCC 1 cut(s) 242
PstI CTGCAG 1 cut(s) 239
PsuI RGATCY 1 cut(s) 231
PteI GCGCGC 1 cut(s) 137
PvuI CGATCG 1 cut(s) 604
RsaI GTAC 3 cut(s) 65, 128, 572
RsaNI GTAC 3 cut(s) 64, 127, 571
RseI CAYNNNNRTG 2 cut(s) 219, 456
SapI GCTCTTC 1 cut(s) 435
SaqAI TTAA 1 cut(s) 528
SatI GCNGC 2 cut(s) 142, 202
Sau3AI GATC 3 cut(s) 231, 538, 601
ScrFI CCNGG 2 cut(s) 131, 229
SduI GDGCHC 1 cut(s) 325
SfaNI GCATC 3 cut(s) 199, 214, 561
SfcI CTRYAG 1 cut(s) 235
SmiMI CAYNNNNRTG 2 cut(s) 219, 456
SmlI CTYRAG 1 cut(s) 716
SmoI CTYRAG 1 cut(s) 716
Sse9I AATT 3 cut(s) 14, 260, 647
SseBI AGGCCT 1 cut(s) 404
SsiI CCGC 2 cut(s) 101, 141
StuI AGGCCT 1 cut(s) 404
StyD4I CCNGG 2 cut(s) 129, 227
StyI CCWWGG 4 cut(s) 399, 480, 556, 657
TaaI ACNGT 1 cut(s) 379
TaiI ACGT 3 cut(s) 65, 119, 423
TaqI TCGA 2 cut(s) 600, 618
TaqII GACCGA 1 cut(s) 290
TasI AATT 3 cut(s) 14, 260, 647
TatI WGTACW 1 cut(s) 570
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 2 cut(s) 266, 369
Tru1I TTAA 1 cut(s) 528
Tru9I TTAA 1 cut(s) 528
TscAI CASTG 2 cut(s) 27, 330
TseFI GTSAC 1 cut(s) 387
TseI GCWGC 1 cut(s) 201
Tsp45I GTSAC 1 cut(s) 387
TspDTI ATGAA 1 cut(s) 459
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 2 cut(s) 27, 330
Van91I CCANNNNNTGG 1 cut(s) 262
VneI GTGCAC 1 cut(s) 321
XapI RAATTY 1 cut(s) 14
XceI RCATGY 1 cut(s) 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.