pycom10g13870

Cell division control protein 45 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0016184
Physical Location & Seq
Reverse (-)
17354497 .. 17356290
1794 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1794 bp
ATGGTGAGAGAGACAACTGTGGAGTCCTTCTACCGGAGGCTCCGTGAGTCCGCAACGGCGTCGTCTCAATCTCCTCTTCTGATATTTCCATCGACTTCAGATGTGGACTCGCTCTGCGCCCTCAAAATCATCTTCCATGTCCTCGAATCCGATTCGGTTCGATACGCTTGCTACCCTGTTTCTTCGTTTCAGGAGATTCACAAGTACGCAGGGCCGGATCTGTGTTCTTCGTCGGAAAACCCGGTTTCGATACTTTTGATCAATTGGGGCTGCCACCGGGACCTGAAGAAGCTCCTCAATTTGTCTCCCAAGGCTCGTGTTTTCGTGGTTGACAGCCACCGTCCGATTCATTTGCATAATCTGAGCGACCAGAACGATCGTGTGGTTGTGCTTTATACTTTGGATGATGAGGGGCAGGCTGATTTGGCGTATGACATTGAGGATGTGTCGGCTTTGGCGAATGCGAGTGATTTGAATAGTGATGATGAGTTTGACCCCGAATCGGATAGCGACAGTGACGGTGATGACAGCCAGAGTGGGGAGGAAGAAGAAGAAAATGGTGACGGGTCGAGAAAGCGAAGAAGGGTGGATCGGGAGAGCGACCCAGTTAAGCTTTTCCGGGACCTGAAGAGGAAATATTATCATTTGGGTACTTTTCATGGTAAGCCTTCAGGGTGTTTGATGTATGATTTATCACATTCTTTGAGGAAGAACACAAATGAGTTGCTTTGGTTGGCTTGCGTTTCGTTAACGGATCAGTTTTTGCACGAGAGGTTAACGGATGAGAGGTACCAAGCTGCGGTGATGGAGCTTGAGCAGTACATTAACAGTTCCGGGAATTTGGAGGCAGTGACTAATGTGACTCTCAAAGACGGCACGAAGATTCGCGTGCCCCAGGCTTCTAGAATTACATACGAAGATGAGCCTAGGCTAATGTTGTTGCAGGAGTGGAATTTATTCGATTCGATGCTTTGTTCTTCGTACATTGCTACTAAATTGAAGACGTGGAGTGACAATGGGATAAAGAAGCTCAAGCTTCTTCTTGCAAGGATGGGATTTTCGCTTGTGGATTGCCAGCAAAAATATAGGTACATGGATACAGAAGTGAAACAGCTGATGAAAGAGGAGTTTGAACGGTTTTTACCCGAATATGGACTCACTGATTTCTACTACAGGAGCTTTTTGCGGCTCCATGGTTACAGATCAAGGGTATCTGCAGCAGATGTGGTGTATGGAGTTACAGCACTGCTTGAATCGTATGTGACATCAGATGGTTCTTGTGCTTCCAAAGAGTTTGGGATGGCTTATGATGCATTGTCAATGAACAATCTCGATAAGCTGAAAGGGGGAATGCAACAAGCAATAAAGATCCAGAGGGCAATTCTAAGGCAAGGAAGCACGGCAATAACCAAGAGAGGCTGCATAAGAAGTGGAAGGAAATTTCGGTGGGTGAAACTCGAAGACTCGTTGGATGCAAAATTATTGGGGTACCCTCAGGCATTGACAAAATTCTGCTATTTCCTGATGGACGGTCTGAGAGAGAAGGGAGCTCGAATGAAGCCTCTGGTTTGTGCTTGCTTGGCACAAGAGCCTAAAAAGGTGTTGATAGTTGGCGTTTGTGGGAAGCCTAGACTTGGAGCGGTTCAAGGAAATGCATTTGGAATCGCATTCAGAAATGCAGCTCAGGAGATCGGTGCAGAGTTCTTCCATGAGTTGTTTGAGTCGTCGTGGATTGTTCTGGAGGCGGCTAAGATGAATCGCTTCATGGTGAGGCTGACAGAAGCTGTGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003688 GO:0003690 GO:0003697 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0023052 GO:0031261 GO:0031298 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031570 GO:0031573 GO:0031935 GO:0031938 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033260 GO:0033262 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0035556 GO:0036387 GO:0036388 GO:0042770 GO:0043138 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044786 GO:0045786 GO:0045787 GO:0045930 GO:0045931 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071163 GO:0071704 GO:0071824 GO:0071840 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072428 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0097159 GO:0140097 GO:1900087 GO:1901360 GO:1901363 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902275 GO:1902292 GO:1902299 GO:1902315 GO:1902402 GO:1902403 GO:1902576 GO:1902806 GO:1902808 GO:1902969 GO:1902975 GO:1902977 GO:1903047 GO:1903463 GO:1903464 GO:1903506 GO:1990837 GO:2000045 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
CDC45

Protein Analysis

598

Amino Acids

67.82

Weight (kDa)

6.03

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC45 PF02724 27 - 594 2.9e-167 CDC45
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25100
fragaria_vesca FvH4_2g18640
malus_domestica MD05G1172300.v1.1 MD10G1160500.v1.1
prunus_persica Prupe.8G199700_v2.0.a1 Prupe.8G199700_v2.0.a1
pyrus_communis pycom05g15890 pycom10g13870
rosa_chinensis RchiOBHm_Chr6g0284201
rosa_laevigata RLG00000012757
rosa_multiflora Rmu_sc0003778.1_g000001
rosa_roxburghii Rroxscaffold_7G00184790
rosa_rugosa Rorug06G0161800
rosa_samantha Rh6BG275200
rosa_wichuraiana Rw6G023630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 789, 1488
AccB1I GGYRCC 2 cut(s) 789, 1488
AccBSI CCGCTC 1 cut(s) 1640
AccII CGCG 1 cut(s) 888
AciI CCGC 5 cut(s) 51, 800, 1186, 1640, 1745
AclWI GGATC 4 cut(s) 225, 597, 762, 1363
AcsI RAATTY 4 cut(s) 838, 952, 1439, 1508
AcuI CTGAAG 4 cut(s) 81, 305, 647, 654
AcyI GRCGYC 1 cut(s) 59
AfaI GTAC 7 cut(s) 206, 652, 791, 821, 983, 1091, 1490
AfiI CCNNNNNNNGG 6 cut(s) 33, 502, 538, 799, 1151, 1634
AgsI TTSAA 5 cut(s) 475, 1000, 1133, 1253, 1646
AjiI CACGTC 1 cut(s) 1005
AjnI CCWGG 1 cut(s) 894
Alw21I GWGCWC 1 cut(s) 1552
Alw26I GTCTC 3 cut(s) 5, 69, 309
AlwI GGATC 4 cut(s) 225, 597, 762, 1363
AlwNI CAGNNNCTG 1 cut(s) 1784
AoxI GGCC 1 cut(s) 212
ApeKI GCWGC 5 cut(s) 270, 797, 1217, 1419, 1679
ApoI RAATTY 4 cut(s) 838, 952, 1439, 1508
Asp700I GAANNNNTTC 2 cut(s) 956, 1760
Asp718I GGTACC 2 cut(s) 789, 1488
AspA2I CCTAGG 1 cut(s) 926
AspLEI GCGC 1 cut(s) 119
AspS9I GGNCC 3 cut(s) 212, 280, 622
AsuC2I CCSGG 4 cut(s) 242, 278, 620, 835
AsuHPI GGTGA 6 cut(s) 16, 533, 572, 814, 1462, 1780
AvaII GGWCC 2 cut(s) 280, 622
AvrII CCTAGG 1 cut(s) 926
AxyI CCTNAGG 1 cut(s) 1494
BaeGI GKGCMC 1 cut(s) 894
BaeI ACNNNNGTAYC 2 cut(s) 1089, 1122
BanI GGYRCC 2 cut(s) 789, 1488
BanII GRGCYC 1 cut(s) 1552
BauI CACGAG 2 cut(s) 315, 767
BbsI GAAGAC 2 cut(s) 1007, 1467
Bbv12I GWGCWC 1 cut(s) 1552
BbvI GCAGC 5 cut(s) 257, 784, 1229, 1406, 1691
BccI CCATC 6 cut(s) 97, 799, 1045, 1265, 1294, 1519
BceAI ACGGC 3 cut(s) 72, 889, 1416
BcgI CGANNNNNNTGC 6 cut(s) 42, 76, 150, 184, 334, 368
BciT130I CCWGG 1 cut(s) 896
BciVI GTATCC 1 cut(s) 1090
BclI TGATCA 1 cut(s) 258
BcnI CCSGG 4 cut(s) 242, 278, 620, 835
BcoDI GTCTC 3 cut(s) 5, 69, 309
BfaI CTAG 3 cut(s) 903, 927, 1629
BfmI CTRYAG 2 cut(s) 1171, 1215
BfuI GTATCC 1 cut(s) 1090
BisI GCNGC 7 cut(s) 271, 798, 1187, 1218, 1420, 1680, 1746
BlnI CCTAGG 1 cut(s) 926
BlsI GCNGC 7 cut(s) 272, 799, 1188, 1219, 1421, 1681, 1747
Bme1390I CCNGG 5 cut(s) 242, 278, 620, 835, 896
Bme18I GGWCC 2 cut(s) 280, 622
BmgBI CACGTC 1 cut(s) 1005
BmgT120I GGNCC 3 cut(s) 212, 280, 622
BmiI GGNNCC 6 cut(s) 41, 281, 623, 791, 1190, 1490
BmrFI CCNGG 5 cut(s) 242, 278, 620, 835, 896
BmrI ACTGGG 1 cut(s) 599
BmsI GCATC 3 cut(s) 957, 1300, 1462
BmuI ACTGGG 1 cut(s) 599
BpiI GAAGAC 2 cut(s) 1007, 1467
BpmI CTGGAG 1 cut(s) 1760
Bpu10I CCTNAGC 1 cut(s) 1683
BpuEI CTTGAG 2 cut(s) 833, 1016
BpuMI CCSGG 4 cut(s) 242, 278, 620, 835
BsaHI GRCGYC 1 cut(s) 59
BsaJI CCNNGG 4 cut(s) 309, 894, 926, 1192
BsaWI WCCGGW 1 cut(s) 33
BsaXI ACNNNNNCTCC 2 cut(s) 28, 58
Bsc4I CCNNNNNNNGG 6 cut(s) 33, 502, 538, 799, 1151, 1634
Bse1I ACTGG 1 cut(s) 605
Bse21I CCTNAGG 1 cut(s) 1494
Bse3DI GCAATG 1 cut(s) 984
BseBI CCWGG 1 cut(s) 896
BseDI CCNNGG 4 cut(s) 309, 894, 926, 1192
BseGI GGATG 6 cut(s) 409, 448, 787, 1056, 1305, 1477
BseLI CCNNNNNNNGG 6 cut(s) 33, 502, 538, 799, 1151, 1634
BseMI GCAATG 1 cut(s) 984
BseMII CTCAG 4 cut(s) 353, 1508, 1526, 1697
BseNI ACTGG 1 cut(s) 605
BseRI GAGGAG 3 cut(s) 63, 284, 1139
BseSI GKGCMC 1 cut(s) 894
BseXI GCAGC 5 cut(s) 257, 784, 1229, 1406, 1691
BsgI GTGCAG 1 cut(s) 1716
Bsh1236I CGCG 1 cut(s) 888
Bsh1285I CGRYCG 1 cut(s) 379
BshFI GGCC 1 cut(s) 214
BshNI GGYRCC 2 cut(s) 789, 1488
BsiEI CGRYCG 1 cut(s) 379
BsiHKAI GWGCWC 1 cut(s) 1552
BsiSI CCGG 6 cut(s) 34, 215, 242, 277, 619, 834
BslFI GGGAC 2 cut(s) 293, 635
BslI CCNNNNNNNGG 6 cut(s) 33, 502, 538, 799, 1151, 1634
BsmAI GTCTC 3 cut(s) 5, 69, 309
BsmBI CGTCTC 1 cut(s) 69
BsmFI GGGAC 2 cut(s) 293, 635
BsmI GAATGC 3 cut(s) 466, 1356, 1667
BsnI GGCC 1 cut(s) 214
Bsp1286I GDGCHC 2 cut(s) 894, 1552
Bsp143I GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
Bsp19I CCATGG 1 cut(s) 1192
BspACI CCGC 5 cut(s) 51, 800, 1186, 1640, 1745
BspANI GGCC 1 cut(s) 214
BspCNI CTCAG 4 cut(s) 354, 1507, 1527, 1696
BspFNI CGCG 1 cut(s) 888
BspLI GGNNCC 6 cut(s) 41, 281, 623, 791, 1190, 1490
BspMAI CTGCAG 1 cut(s) 1219
BspPI GGATC 4 cut(s) 225, 597, 762, 1363
BspT107I GGYRCC 2 cut(s) 789, 1488
BsrBI CCGCTC 1 cut(s) 1640
BsrDI GCAATG 1 cut(s) 984
BsrI ACTGG 1 cut(s) 605
BssECI CCNNGG 4 cut(s) 309, 894, 926, 1192
BssMI GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
BssNI GRCGYC 1 cut(s) 59
BssSI CACGAG 2 cut(s) 315, 767
BssT1I CCWWGG 3 cut(s) 309, 926, 1192
Bst2BI CACGAG 2 cut(s) 315, 767
Bst2UI CCWGG 1 cut(s) 896
Bst4CI ACNGT 7 cut(s) 19, 341, 515, 521, 830, 1137, 1532
Bst6I CTCTTC 2 cut(s) 81, 623
BstACI GRCGYC 1 cut(s) 59
BstC8I GCNNGC 6 cut(s) 169, 417, 739, 890, 1076, 1576
BstDEI CTNAG 6 cut(s) 362, 1385, 1494, 1535, 1683, 1749
BstDSI CCRYGG 1 cut(s) 1192
BstF5I GGATG 6 cut(s) 409, 448, 787, 1056, 1305, 1477
BstFNI CGCG 1 cut(s) 888
BstHHI GCGC 1 cut(s) 119
BstKTI GATC 8 cut(s) 220, 261, 379, 592, 757, 1205, 1371, 1692
BstMAI GTCTC 3 cut(s) 5, 69, 309
BstMBI GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
BstMCI CGRYCG 1 cut(s) 379
BstMWI GCNNNNNNNGC 3 cut(s) 425, 1310, 1580
BstNI CCWGG 1 cut(s) 896
BstSCI CCNGG 5 cut(s) 240, 276, 618, 833, 894
BstSFI CTRYAG 2 cut(s) 1171, 1215
BstSLI GKGCMC 1 cut(s) 894
BstUI CGCG 1 cut(s) 888
BstV1I GCAGC 5 cut(s) 257, 784, 1229, 1406, 1691
BstV2I GAAGAC 2 cut(s) 1007, 1467
BstX2I RGATCY 2 cut(s) 217, 1368
BstYI RGATCY 2 cut(s) 217, 1368
Bsu36I CCTNAGG 1 cut(s) 1494
BsuI GTATCC 1 cut(s) 1090
BsuRI GGCC 1 cut(s) 214
BtgI CCRYGG 1 cut(s) 1192
BtrI CACGTC 1 cut(s) 1005
BtsCI GGATG 6 cut(s) 409, 448, 787, 1056, 1305, 1477
BtsI GCAGTG 2 cut(s) 855, 1244
BtsIMutI CAGTG 4 cut(s) 520, 855, 1158, 1244
Cac8I GCNNGC 6 cut(s) 169, 417, 739, 890, 1076, 1576
CaiI CAGNNNCTG 1 cut(s) 1784
CfoI GCGC 1 cut(s) 119
Cfr13I GGNCC 3 cut(s) 212, 280, 622
CseI GACGC 1 cut(s) 48
Csp6I GTAC 7 cut(s) 205, 651, 790, 820, 982, 1090, 1489
CviAII CATG 6 cut(s) 137, 659, 1093, 1193, 1709, 1765
CviQI GTAC 7 cut(s) 205, 651, 790, 820, 982, 1090, 1489
DdeI CTNAG 6 cut(s) 362, 1385, 1494, 1535, 1683, 1749
DpnI GATC 8 cut(s) 219, 260, 378, 591, 756, 1204, 1370, 1691
DpnII GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
Eam1104I CTCTTC 2 cut(s) 81, 623
EarI CTCTTC 2 cut(s) 81, 623
Ecl136II GAGCTC 1 cut(s) 1550
Eco130I CCWWGG 3 cut(s) 309, 926, 1192
Eco24I GRGCYC 1 cut(s) 1552
Eco47I GGWCC 2 cut(s) 280, 622
Eco53kI GAGCTC 1 cut(s) 1550
Eco57I CTGAAG 4 cut(s) 81, 305, 647, 654
Eco81I CCTNAGG 1 cut(s) 1494
EcoICRI GAGCTC 1 cut(s) 1550
EcoO109I RGGNCCY 2 cut(s) 280, 622
EcoRII CCWGG 1 cut(s) 894
EcoT14I CCWWGG 3 cut(s) 309, 926, 1192
EcoT22I ATGCAT 2 cut(s) 1315, 1657
EcoT38I GRGCYC 1 cut(s) 1552
ErhI CCWWGG 3 cut(s) 309, 926, 1192
Esp3I CGTCTC 1 cut(s) 69
FaeI CATG 6 cut(s) 140, 662, 1096, 1196, 1712, 1768
FaqI GGGAC 2 cut(s) 293, 635
FatI CATG 6 cut(s) 136, 658, 1092, 1192, 1708, 1764
FbaI TGATCA 1 cut(s) 258
Fnu4HI GCNGC 7 cut(s) 271, 798, 1187, 1218, 1420, 1680, 1746
FokI GGATG 6 cut(s) 416, 455, 794, 1063, 1312, 1484
FriOI GRGCYC 1 cut(s) 1552
Fsp4HI GCNGC 7 cut(s) 271, 798, 1187, 1218, 1420, 1680, 1746
FspBI CTAG 3 cut(s) 903, 927, 1629
GlaI GCGC 1 cut(s) 118
GluI GCNGC 7 cut(s) 271, 798, 1187, 1218, 1420, 1680, 1746
GsuI CTGGAG 1 cut(s) 1760
HaeIII GGCC 1 cut(s) 214
HapII CCGG 6 cut(s) 34, 215, 242, 277, 619, 834
HgaI GACGC 1 cut(s) 48
HhaI GCGC 1 cut(s) 119
Hin1I GRCGYC 1 cut(s) 59
Hin1II CATG 6 cut(s) 140, 662, 1096, 1196, 1712, 1768
Hin6I GCGC 1 cut(s) 117
HinP1I GCGC 1 cut(s) 117
HincII GTYRAC 3 cut(s) 331, 750, 777
HindII GTYRAC 3 cut(s) 331, 750, 777
HindIII AAGCTT 2 cut(s) 611, 1034
HpaI GTTAAC 2 cut(s) 750, 777
HpaII CCGG 6 cut(s) 34, 215, 242, 277, 619, 834
HphI GGTGA 6 cut(s) 16, 533, 572, 814, 1462, 1780
Hpy166II GTNNAC 4 cut(s) 106, 331, 750, 777
Hpy188III TCNNGA 9 cut(s) 191, 570, 593, 903, 1331, 1372, 1522, 1685, 1739
Hpy8I GTNNAC 4 cut(s) 106, 331, 750, 777
Hpy99I CGWCG 3 cut(s) 64, 235, 1729
HpyAV CCTTC 5 cut(s) 37, 576, 678, 1428, 1537
HpyCH4III ACNGT 7 cut(s) 19, 341, 515, 521, 830, 1137, 1532
HpyCH4IV ACGT 1 cut(s) 1004
HpyF10VI GCNNNNNNNGC 3 cut(s) 425, 1310, 1580
HpyF3I CTNAG 6 cut(s) 362, 1385, 1494, 1535, 1683, 1749
HpySE526I ACGT 1 cut(s) 1004
Hsp92I GRCGYC 1 cut(s) 59
Hsp92II CATG 6 cut(s) 140, 662, 1096, 1196, 1712, 1768
HspAI GCGC 1 cut(s) 117
KpnI GGTACC 2 cut(s) 793, 1492
Ksp22I TGATCA 1 cut(s) 258
KspAI GTTAAC 2 cut(s) 750, 777
Kzo9I GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
LmnI GCTCC 7 cut(s) 45, 297, 808, 1176, 1194, 1547, 1637
Lsp1109I GCAGC 5 cut(s) 257, 784, 1229, 1406, 1691
LweI GCATC 3 cut(s) 957, 1300, 1462
MaeI CTAG 3 cut(s) 903, 927, 1629
MaeII ACGT 1 cut(s) 1004
MaeIII GTNAC 8 cut(s) 515, 560, 850, 859, 1010, 1196, 1237, 1261
MalI GATC 8 cut(s) 219, 260, 378, 591, 756, 1204, 1370, 1691
MbiI CCGCTC 1 cut(s) 1640
MboI GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
MfeI CAATTG 1 cut(s) 262
MflI RGATCY 2 cut(s) 217, 1368
MhlI GDGCHC 2 cut(s) 894, 1552
MlyI GAGTC 7 cut(s) 32, 56, 101, 856, 1149, 1457, 1730
MmeI TCCRAC 2 cut(s) 213, 1449
Mph1103I ATGCAT 2 cut(s) 1315, 1657
MroXI GAANNNNTTC 2 cut(s) 956, 1760
MseI TTAA 4 cut(s) 609, 749, 776, 825
MspA1I CMGCKG 1 cut(s) 1114
MspI CCGG 6 cut(s) 34, 215, 242, 277, 619, 834
MspR9I CCNGG 5 cut(s) 242, 278, 620, 835, 896
MunI CAATTG 1 cut(s) 262
Mva1269I GAATGC 3 cut(s) 466, 1356, 1667
MvaI CCWGG 1 cut(s) 896
MvnI CGCG 1 cut(s) 888
MwoI GCNNNNNNNGC 3 cut(s) 425, 1310, 1580
NciI CCSGG 4 cut(s) 242, 278, 620, 835
NcoI CCATGG 1 cut(s) 1192
NdeII GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
NlaIII CATG 6 cut(s) 140, 662, 1096, 1196, 1712, 1768
NlaIV GGNNCC 6 cut(s) 41, 281, 623, 791, 1190, 1490
NmuCI GTSAC 6 cut(s) 515, 560, 850, 859, 1010, 1261
NsiI ATGCAT 2 cut(s) 1315, 1657
PcsI WCGNNNNNNNCGW 1 cut(s) 455
PctI GAATGC 3 cut(s) 466, 1356, 1667
PdmI GAANNNNTTC 2 cut(s) 956, 1760
PfoI TCCNGGA 2 cut(s) 618, 833
PkrI GCNGC 7 cut(s) 272, 799, 1188, 1219, 1421, 1681, 1747
Ple19I CGATCG 1 cut(s) 379
PleI GAGTC 7 cut(s) 31, 55, 101, 856, 1149, 1457, 1729
PpsI GAGTC 7 cut(s) 31, 55, 101, 856, 1149, 1457, 1729
PpuMI RGGWCCY 2 cut(s) 280, 622
Psp124BI GAGCTC 1 cut(s) 1552
Psp5II RGGWCCY 2 cut(s) 280, 622
Psp6I CCWGG 1 cut(s) 894
PspGI CCWGG 1 cut(s) 894
PspN4I GGNNCC 6 cut(s) 41, 281, 623, 791, 1190, 1490
PspPI GGNCC 3 cut(s) 212, 280, 622
PspPPI RGGWCCY 2 cut(s) 280, 622
PsrI GAACNNNNNNTAC 2 cut(s) 1125, 1157
PstI CTGCAG 1 cut(s) 1219
PstNI CAGNNNCTG 1 cut(s) 1784
PsuI RGATCY 2 cut(s) 217, 1368
PvuI CGATCG 1 cut(s) 379
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 7 cut(s) 206, 652, 791, 821, 983, 1091, 1490
RsaNI GTAC 7 cut(s) 205, 651, 790, 820, 982, 1090, 1489
SacI GAGCTC 1 cut(s) 1552
SaqAI TTAA 4 cut(s) 609, 749, 776, 825
SatI GCNGC 7 cut(s) 271, 798, 1187, 1218, 1420, 1680, 1746
Sau3AI GATC 8 cut(s) 217, 258, 376, 589, 754, 1202, 1368, 1689
Sau96I GGNCC 3 cut(s) 212, 280, 622
SchI GAGTC 7 cut(s) 32, 56, 101, 856, 1149, 1457, 1730
ScrFI CCNGG 5 cut(s) 242, 278, 620, 835, 896
SduI GDGCHC 2 cut(s) 894, 1552
SfaNI GCATC 3 cut(s) 957, 1300, 1462
SfcI CTRYAG 2 cut(s) 1171, 1215
SinI GGWCC 2 cut(s) 280, 622
SmlI CTYRAG 2 cut(s) 812, 1031
SmoI CTYRAG 2 cut(s) 812, 1031
SsiI CCGC 5 cut(s) 51, 800, 1186, 1640, 1745
SspI AATATT 1 cut(s) 638
SspMI CTAG 3 cut(s) 903, 927, 1629
SstI GAGCTC 1 cut(s) 1552
StyD4I CCNGG 5 cut(s) 240, 276, 618, 833, 894
StyI CCWWGG 3 cut(s) 309, 926, 1192
TaaI ACNGT 7 cut(s) 19, 341, 515, 521, 830, 1137, 1532
TaiI ACGT 1 cut(s) 1007
TatI WGTACW 1 cut(s) 819
TauI GCSGC 2 cut(s) 1189, 1748
Tru1I TTAA 4 cut(s) 609, 749, 776, 825
Tru9I TTAA 4 cut(s) 609, 749, 776, 825
TscAI CASTG 4 cut(s) 520, 855, 1165, 1251
TseFI GTSAC 6 cut(s) 515, 560, 850, 859, 1010, 1261
TseI GCWGC 5 cut(s) 270, 797, 1217, 1419, 1679
Tsp45I GTSAC 6 cut(s) 515, 560, 850, 859, 1010, 1261
TspDTI ATGAA 7 cut(s) 338, 647, 1133, 1337, 1571, 1753, 1769
TspGWI ACGGA 3 cut(s) 32, 767, 794
TspRI CASTG 4 cut(s) 520, 855, 1165, 1251
VpaK11BI GGWCC 2 cut(s) 280, 622
XapI RAATTY 4 cut(s) 838, 952, 1439, 1508
XbaI TCTAGA 1 cut(s) 902
XmaJI CCTAGG 1 cut(s) 926
XmnI GAANNNNTTC 2 cut(s) 956, 1760
XspI CTAG 3 cut(s) 903, 927, 1629
Zsp2I ATGCAT 2 cut(s) 1315, 1657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.