pycom10g14280

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
17654321 .. 17658349
4029 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1650 bp
ATGGCTCTCAGATATCGGCGTTTCAGAGAAATCTCACGAATATTGCCGCGAATTCACTCCGGTGATCATCTTCTACAATGTAGATTGGTTACCAAGTTCTCGGCTTTGTCCATAATTCCACAGTCACACGCTCTGGAAAGAATTGATGAAGGGATTTCACAATGTGGGTTTCGTACCCAGCGGCTATCAACCACGTCAAAAGTATCACACGAGCGTACCGGTGAACTTGATCTTTTGTCCTTCATTAAATCCACATTAAATGTGCTCGAAGGTCCTTGCCATTGTTGGTTGAATAGGTCCAAGGGAGGCAAAGATTCCTTTAAAAGAGATGGAACTTTCTTGGTTCTTGCTGGACGGTGTCTTGAAGCTTCTTTAACAACTAGTTCCGAAGCTGCTATCATGTTAGAAAAAGTGAAGTCACTTCAACAGAGGTTTCCTCGTCTCCACATTATCGGCTTTGTGTCAGGTGGGTCGATTCACTCGGCTGCTGATCGAAGCCATGTAATCCAATATACACTGACGGAATACATAACATTTCCTATTATATTGTCGAACAAGAACTTCACTGAGATGGCAAACGGGGCATGCTGCATTTTGTTTAAAGGTTTTAAAAGTCCAGTGGTTTACCATGAGAAGGACATGGATCTCAAAGTTCTTAGTAAAGCTGTTGAGGACTTGCTTGTGCAAGATGATAGGAGTTCCAAGTCACTTACTAACTTGAAAAGCACTTGGGCGAAGCAACCTGAGATCATTAAGGAACCATATGCTGATTCTTTAAGGAATTTTCTCTTCCACTTCCCAGGCTGCATCTCTGCAGATGAAAGTGGGAACCGCCTCTTCCTTTCTGACAGCAATCATCATCGGATTATTGTATTTGATGGAAATGGGCATATTCTGGACTGTATTGGTTCCTCCCCAGGTTTTGAGGATGGAAACTTTGAATCTTCCAAGTTGGCACGCCCTGCAGCTTCATTTTATGTTGCCGCTGAGGATTGCCTATATTTTGTTGATTCAGAGAATCATGCCATCAGGAAAGCTGATATGGAGAGCCGGGTTCTGGAAACCATCTATCCAGTGGGAGACACTACTAAGAAGAGTAATCAATTTTGGACCTGGATCACAACCAAGCTAGGTTTGAAACACAATGCCCATACAAGGACTGAAGGATTTGATTTACAATCATTGATGTATCCATGGCATCTGATGAAATCTATTGATGACAGTCTTGTTGTTATGAACCGAAGCTTTGATACTCTATGGATCCTAAATTTGGCTTCAGGAGAGATAAAAGAAGTCGTCAGAGGGTTCCCAAAGATTTTGGAGGTCTGTGGACCGCAGATCATGGAGAAAGTAGCGCTGTTGAAACAGATGCCACATGATTGGTTGCAAGAGCAGACCAAGGTTGTTTGTTCACCAGAGCTGCTCCCATATGCTGGCCTATTATCTTCATTTACCACCTTGCAGAATCACGTAATCCTTTGTGATATGGTTGGACAGAGGATTTTGAAACTAAGTGAAGAATCTGGAGTATGTTCGACTTTTCAGTTTTCAAATTTTGGAATCCTTGGACTGCCATATTGGTTGCCATCCTCATTGGAGAAAGTATATACTAATGGAGGTGGAGTTGAGGGAGTGATTGATCGATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

550

Amino Acids

61.74

Weight (kDa)

7.27

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1433
AccII CGCG 1 cut(s) 49
AciI CCGC 5 cut(s) 47, 181, 832, 984, 1334
AclWI GGATC 4 cut(s) 651, 1124, 1255, 1268
AcsI RAATTY 4 cut(s) 51, 781, 1267, 1552
AcuI CTGAAG 2 cut(s) 1182, 1260
AdeI CACNNNGTG 1 cut(s) 164
AfaI GTAC 2 cut(s) 175, 217
AfeI AGCGCT 1 cut(s) 1356
AfiI CCNNNNNNNGG 5 cut(s) 634, 1057, 1155, 1270, 1433
AgeI ACCGGT 1 cut(s) 218
AgsI TTSAA 9 cut(s) 292, 365, 425, 721, 941, 1138, 1363, 1507, 1551
AhlI ACTAGT 1 cut(s) 380
AjiI CACGTC 1 cut(s) 195
AjnI CCWGG 3 cut(s) 799, 916, 1112
AleI CACNNNNGTG 1 cut(s) 60
AluBI AGCT 8 cut(s) 368, 392, 665, 968, 1037, 1129, 1245, 1420
AluI AGCT 8 cut(s) 368, 392, 665, 968, 1037, 1129, 1245, 1420
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 2 cut(s) 446, 1074
AlwI GGATC 4 cut(s) 651, 1124, 1255, 1268
Aor51HI AGCGCT 1 cut(s) 1356
AoxI GGCC 1 cut(s) 1435
ApeKI GCWGC 6 cut(s) 392, 485, 588, 804, 965, 1420
ApoI RAATTY 4 cut(s) 51, 781, 1267, 1552
AsiGI ACCGGT 1 cut(s) 218
AspLEI GCGC 1 cut(s) 1357
AspS9I GGNCC 4 cut(s) 272, 297, 1110, 1331
AsuC2I CCSGG 1 cut(s) 1052
AsuHPI GGTGA 3 cut(s) 74, 233, 1404
AvaII GGWCC 4 cut(s) 272, 297, 1110, 1331
BaeI ACNNNNGTAYC 2 cut(s) 199, 232
BamHI GGATCC 1 cut(s) 1260
BarI GAAGNNNNNNTAC 2 cut(s) 1234, 1266
BauI CACGAG 1 cut(s) 209
Bbv12I GWGCWC 1 cut(s) 267
BbvCI CCTCAGC 1 cut(s) 987
BbvI GCAGC 6 cut(s) 379, 472, 575, 791, 977, 1407
BccI CCATC 7 cut(s) 323, 565, 872, 923, 1034, 1073, 1594
BciT130I CCWGG 3 cut(s) 801, 918, 1114
BciVI GTATCC 1 cut(s) 1200
BclI TGATCA 1 cut(s) 64
BcnI CCSGG 1 cut(s) 1052
BcoDI GTCTC 2 cut(s) 446, 1074
BcuI ACTAGT 1 cut(s) 380
BfaI CTAG 2 cut(s) 381, 1130
BfmI CTRYAG 2 cut(s) 813, 963
BfoI RGCGCY 1 cut(s) 1358
BfuI GTATCC 1 cut(s) 1200
BisI GCNGC 9 cut(s) 47, 182, 393, 486, 589, 805, 966, 984, 1421
BlsI GCNGC 9 cut(s) 48, 183, 394, 487, 590, 806, 967, 985, 1422
Bme1390I CCNGG 4 cut(s) 801, 918, 1052, 1114
Bme18I GGWCC 4 cut(s) 272, 297, 1110, 1331
BmgBI CACGTC 1 cut(s) 195
BmgT120I GGNCC 4 cut(s) 272, 297, 1110, 1331
BmiI GGNNCC 5 cut(s) 759, 830, 910, 1262, 1307
BmrFI CCNGG 4 cut(s) 801, 918, 1052, 1114
BmsI GCATC 3 cut(s) 816, 1207, 1359
BplI GAGNNNNNCTC 2 cut(s) 421, 453
BpmI CTGGAG 1 cut(s) 1545
Bpu10I CCTNAGC 1 cut(s) 987
BpuMI CCSGG 1 cut(s) 1052
Bsa29I ATCGAT 1 cut(s) 1642
BsaAI YACGTR 1 cut(s) 1471
BsaJI CCNNGG 6 cut(s) 300, 799, 916, 1193, 1398, 1564
BsaWI WCCGGW 2 cut(s) 59, 218
BsaXI ACNNNNNCTCC 2 cut(s) 1608, 1638
Bsc4I CCNNNNNNNGG 5 cut(s) 634, 1057, 1155, 1270, 1433
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 2 cut(s) 617, 1073
BseBI CCWGG 3 cut(s) 801, 918, 1114
BseCI ATCGAT 1 cut(s) 1642
BseDI CCNNGG 6 cut(s) 300, 799, 916, 1193, 1398, 1564
BseGI GGATG 2 cut(s) 934, 1586
BseLI CCNNNNNNNGG 5 cut(s) 634, 1057, 1155, 1270, 1433
BseMII CTCAG 4 cut(s) 22, 558, 735, 978
BseNI ACTGG 2 cut(s) 617, 1073
BseXI GCAGC 6 cut(s) 379, 472, 575, 791, 977, 1407
BseYI CCCAGC 1 cut(s) 177
Bsh1236I CGCG 1 cut(s) 49
BshFI GGCC 1 cut(s) 1437
BshTI ACCGGT 1 cut(s) 218
BshVI ATCGAT 1 cut(s) 1642
BsiHKAI GWGCWC 1 cut(s) 267
BsiSI CCGG 3 cut(s) 60, 219, 1051
BslI CCNNNNNNNGG 5 cut(s) 634, 1057, 1155, 1270, 1433
BsmAI GTCTC 2 cut(s) 446, 1074
BsmBI CGTCTC 1 cut(s) 446
BsnI GGCC 1 cut(s) 1437
Bsp1286I GDGCHC 1 cut(s) 267
Bsp19I CCATGG 1 cut(s) 1193
BspACI CCGC 5 cut(s) 47, 181, 832, 984, 1334
BspANI GGCC 1 cut(s) 1437
BspCNI CTCAG 4 cut(s) 21, 559, 736, 979
BspDI ATCGAT 1 cut(s) 1642
BspFNI CGCG 1 cut(s) 49
BspLI GGNNCC 5 cut(s) 759, 830, 910, 1262, 1307
BspMAI CTGCAG 2 cut(s) 817, 967
BspPI GGATC 4 cut(s) 651, 1124, 1255, 1268
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 2 cut(s) 617, 1073
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 6 cut(s) 300, 799, 916, 1193, 1398, 1564
BssSI CACGAG 1 cut(s) 209
BssT1I CCWWGG 4 cut(s) 300, 1193, 1398, 1564
Bst2BI CACGAG 1 cut(s) 209
Bst2UI CCWGG 3 cut(s) 801, 918, 1114
Bst4CI ACNGT 4 cut(s) 123, 357, 902, 1223
Bst6I CTCTTC 3 cut(s) 794, 842, 1088
BstAPI GCANNNNNTGC 1 cut(s) 962
BstBAI YACGTR 1 cut(s) 1471
BstC8I GCNNGC 3 cut(s) 586, 958, 1435
BstDEI CTNAG 7 cut(s) 8, 567, 656, 744, 987, 1089, 1511
BstDSI CCRYGG 1 cut(s) 1193
BstEII GGTNACC 1 cut(s) 88
BstF5I GGATG 2 cut(s) 934, 1586
BstFNI CGCG 1 cut(s) 49
BstH2I RGCGCY 1 cut(s) 1358
BstHHI GCGC 1 cut(s) 1357
BstMAI GTCTC 2 cut(s) 446, 1074
BstMWI GCNNNNNNNGC 2 cut(s) 581, 962
BstNI CCWGG 3 cut(s) 801, 918, 1114
BstNSI RCATGY 1 cut(s) 588
BstPI GGTNACC 1 cut(s) 88
BstSCI CCNGG 4 cut(s) 799, 916, 1050, 1112
BstSFI CTRYAG 2 cut(s) 813, 963
BstUI CGCG 1 cut(s) 49
BstV1I GCAGC 6 cut(s) 379, 472, 575, 791, 977, 1407
BstX2I RGATCY 2 cut(s) 643, 1260
BstXI CCANNNNNNTGG 1 cut(s) 1380
BstYI RGATCY 2 cut(s) 643, 1260
Bsu15I ATCGAT 1 cut(s) 1642
BsuI GTATCC 1 cut(s) 1200
BsuRI GGCC 1 cut(s) 1437
BsuTUI ATCGAT 1 cut(s) 1642
BtgI CCRYGG 1 cut(s) 1193
BtrI CACGTC 1 cut(s) 195
BtsCI GGATG 2 cut(s) 934, 1586
BtsIMutI CAGTG 4 cut(s) 515, 564, 624, 1080
Cac8I GCNNGC 3 cut(s) 586, 958, 1435
CfoI GCGC 1 cut(s) 1357
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 4 cut(s) 272, 297, 1110, 1331
ClaI ATCGAT 1 cut(s) 1642
Csp6I GTAC 2 cut(s) 174, 216
CspAI ACCGGT 1 cut(s) 218
CviAII CATG 9 cut(s) 400, 500, 585, 629, 640, 1022, 1194, 1342, 1376
CviQI GTAC 2 cut(s) 174, 216
DdeI CTNAG 7 cut(s) 8, 567, 656, 744, 987, 1089, 1511
DraI TTTAAA 3 cut(s) 322, 601, 610
DraIII CACNNNGTG 1 cut(s) 164
Eam1104I CTCTTC 3 cut(s) 794, 842, 1088
EarI CTCTTC 3 cut(s) 794, 842, 1088
Eco130I CCWWGG 4 cut(s) 300, 1193, 1398, 1564
Eco32I GATATC 1 cut(s) 14
Eco47I GGWCC 4 cut(s) 272, 297, 1110, 1331
Eco47III AGCGCT 1 cut(s) 1356
Eco57I CTGAAG 2 cut(s) 1182, 1260
Eco91I GGTNACC 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 272
EcoO65I GGTNACC 1 cut(s) 88
EcoRI GAATTC 1 cut(s) 51
EcoRII CCWGG 3 cut(s) 799, 916, 1112
EcoRV GATATC 1 cut(s) 14
EcoT14I CCWWGG 4 cut(s) 300, 1193, 1398, 1564
ErhI CCWWGG 4 cut(s) 300, 1193, 1398, 1564
Esp3I CGTCTC 1 cut(s) 446
FaeI CATG 9 cut(s) 403, 503, 588, 632, 643, 1025, 1197, 1345, 1379
FatI CATG 9 cut(s) 399, 499, 584, 628, 639, 1021, 1193, 1341, 1375
FauNDI CATATG 2 cut(s) 763, 1429
FbaI TGATCA 1 cut(s) 64
Fnu4HI GCNGC 9 cut(s) 47, 182, 393, 486, 589, 805, 966, 984, 1421
FokI GGATG 2 cut(s) 941, 1573
Fsp4HI GCNGC 9 cut(s) 47, 182, 393, 486, 589, 805, 966, 984, 1421
FspBI CTAG 2 cut(s) 381, 1130
GlaI GCGC 1 cut(s) 1356
GluI GCNGC 9 cut(s) 47, 182, 393, 486, 589, 805, 966, 984, 1421
GsaI CCCAGC 1 cut(s) 181
GsuI CTGGAG 1 cut(s) 1545
HaeII RGCGCY 1 cut(s) 1358
HaeIII GGCC 1 cut(s) 1437
HapII CCGG 3 cut(s) 60, 219, 1051
HhaI GCGC 1 cut(s) 1357
Hin1II CATG 9 cut(s) 403, 503, 588, 632, 643, 1025, 1197, 1345, 1379
Hin6I GCGC 1 cut(s) 1355
HinP1I GCGC 1 cut(s) 1355
HindIII AAGCTT 2 cut(s) 366, 1243
HinfI GANTC 9 cut(s) 314, 475, 770, 941, 1010, 1018, 1465, 1520, 1560
HpaII CCGG 3 cut(s) 60, 219, 1051
HphI GGTGA 3 cut(s) 74, 233, 1404
Hpy166II GTNNAC 4 cut(s) 224, 625, 1331, 1412
Hpy188I TCNGA 8 cut(s) 11, 26, 388, 847, 864, 1015, 1203, 1301
Hpy188III TCNNGA 9 cut(s) 36, 134, 362, 896, 1030, 1058, 1278, 1524, 1647
Hpy8I GTNNAC 4 cut(s) 224, 625, 1331, 1412
HpyAV CCTTC 5 cut(s) 143, 250, 263, 628, 1157
HpyCH4III ACNGT 4 cut(s) 123, 357, 902, 1223
HpyCH4IV ACGT 2 cut(s) 194, 1470
HpyCH4V TGCA 7 cut(s) 591, 685, 807, 815, 965, 1387, 1462
HpyF10VI GCNNNNNNNGC 2 cut(s) 581, 962
HpyF3I CTNAG 7 cut(s) 8, 567, 656, 744, 987, 1089, 1511
HpySE526I ACGT 2 cut(s) 194, 1470
Hsp92II CATG 9 cut(s) 403, 503, 588, 632, 643, 1025, 1197, 1345, 1379
HspAI GCGC 1 cut(s) 1355
Ksp22I TGATCA 1 cut(s) 64
LmnI GCTCC 1 cut(s) 1428
Lsp1109I GCAGC 6 cut(s) 379, 472, 575, 791, 977, 1407
LweI GCATC 3 cut(s) 816, 1207, 1359
MaeI CTAG 2 cut(s) 381, 1130
MaeII ACGT 2 cut(s) 194, 1470
MaeIII GTNAC 4 cut(s) 88, 123, 417, 705
MboII GAAGA 7 cut(s) 62, 781, 829, 936, 1105, 1437, 1529
MflI RGATCY 2 cut(s) 643, 1260
MhlI GDGCHC 1 cut(s) 267
MluCI AATT 7 cut(s) 51, 114, 141, 781, 1103, 1267, 1552
MmeI TCCRAC 1 cut(s) 1471
MseI TTAA 8 cut(s) 246, 257, 321, 374, 600, 609, 753, 776
MslI CAYNNNNRTG 2 cut(s) 60, 569
MspA1I CMGCKG 2 cut(s) 181, 986
MspI CCGG 3 cut(s) 60, 219, 1051
MspR9I CCNGG 4 cut(s) 801, 918, 1052, 1114
MvaI CCWGG 3 cut(s) 801, 918, 1114
MvnI CGCG 1 cut(s) 49
MwoI GCNNNNNNNGC 2 cut(s) 581, 962
NciI CCSGG 1 cut(s) 1052
NcoI CCATGG 1 cut(s) 1193
NdeI CATATG 2 cut(s) 763, 1429
NlaIII CATG 9 cut(s) 403, 503, 588, 632, 643, 1025, 1197, 1345, 1379
NlaIV GGNNCC 5 cut(s) 759, 830, 910, 1262, 1307
NmeAIII GCCGAG 2 cut(s) 80, 461
NmuCI GTSAC 3 cut(s) 123, 417, 705
NspI RCATGY 1 cut(s) 588
OliI CACNNNNGTG 1 cut(s) 60
PaeI GCATGC 1 cut(s) 588
PfeI GAWTC 9 cut(s) 314, 475, 770, 941, 1010, 1018, 1465, 1520, 1560
PflFI GACNNNGTC 1 cut(s) 357
PflMI CCANNNNNTGG 1 cut(s) 1433
PinAI ACCGGT 1 cut(s) 218
PkrI GCNGC 9 cut(s) 48, 183, 394, 487, 590, 806, 967, 985, 1422
Ppu21I YACGTR 1 cut(s) 1471
PpuMI RGGWCCY 1 cut(s) 272
Psp5II RGGWCCY 1 cut(s) 272
Psp6I CCWGG 3 cut(s) 799, 916, 1112
PspEI GGTNACC 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 177
PspGI CCWGG 3 cut(s) 799, 916, 1112
PspN4I GGNNCC 5 cut(s) 759, 830, 910, 1262, 1307
PspPI GGNCC 4 cut(s) 272, 297, 1110, 1331
PspPPI RGGWCCY 1 cut(s) 272
PstI CTGCAG 2 cut(s) 817, 967
PsuI RGATCY 2 cut(s) 643, 1260
PsyI GACNNNGTC 1 cut(s) 357
RsaI GTAC 2 cut(s) 175, 217
RsaNI GTAC 2 cut(s) 174, 216
RseI CAYNNNNRTG 2 cut(s) 60, 569
SaqAI TTAA 8 cut(s) 246, 257, 321, 374, 600, 609, 753, 776
SatI GCNGC 9 cut(s) 47, 182, 393, 486, 589, 805, 966, 984, 1421
Sau96I GGNCC 4 cut(s) 272, 297, 1110, 1331
ScrFI CCNGG 4 cut(s) 801, 918, 1052, 1114
SduI GDGCHC 1 cut(s) 267
SfaNI GCATC 3 cut(s) 816, 1207, 1359
SfcI CTRYAG 2 cut(s) 813, 963
SinI GGWCC 4 cut(s) 272, 297, 1110, 1331
SmiMI CAYNNNNRTG 2 cut(s) 60, 569
SpeI ACTAGT 1 cut(s) 380
SphI GCATGC 1 cut(s) 588
Sse9I AATT 7 cut(s) 51, 114, 141, 781, 1103, 1267, 1552
SsiI CCGC 5 cut(s) 47, 181, 832, 984, 1334
SspI AATATT 1 cut(s) 42
SspMI CTAG 2 cut(s) 381, 1130
StyD4I CCNGG 4 cut(s) 799, 916, 1050, 1112
StyI CCWWGG 4 cut(s) 300, 1193, 1398, 1564
TaaI ACNGT 4 cut(s) 123, 357, 902, 1223
TaiI ACGT 2 cut(s) 197, 1473
TaqI TCGA 6 cut(s) 267, 473, 493, 551, 1535, 1642
TasI AATT 7 cut(s) 51, 114, 141, 781, 1103, 1267, 1552
TauI GCSGC 3 cut(s) 49, 184, 986
TfiI GAWTC 9 cut(s) 314, 475, 770, 941, 1010, 1018, 1465, 1520, 1560
Tru1I TTAA 8 cut(s) 246, 257, 321, 374, 600, 609, 753, 776
Tru9I TTAA 8 cut(s) 246, 257, 321, 374, 600, 609, 753, 776
TscAI CASTG 4 cut(s) 522, 571, 624, 1080
TseFI GTSAC 3 cut(s) 123, 417, 705
TseI GCWGC 6 cut(s) 392, 485, 588, 804, 965, 1420
Tsp45I GTSAC 3 cut(s) 123, 417, 705
TspDTI ATGAA 7 cut(s) 162, 232, 834, 960, 1220, 1250, 1437
TspGWI ACGGA 1 cut(s) 536
TspRI CASTG 4 cut(s) 522, 571, 624, 1080
Tth111I GACNNNGTC 1 cut(s) 357
Van91I CCANNNNNTGG 1 cut(s) 1433
VpaK11BI GGWCC 4 cut(s) 272, 297, 1110, 1331
XapI RAATTY 4 cut(s) 51, 781, 1267, 1552
XceI RCATGY 1 cut(s) 588
XcmI CCANNNNNNNNNTGG 1 cut(s) 1072
XspI CTAG 2 cut(s) 381, 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.