Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0003725

Physical Location & Seq

Genomic Coordinates Reverse (-)

21915309 .. 21920777

Gene Structure 5469 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGAAGTATATTTTGGTGACAGGAGGAGTAGTAAGTGGACTTGGGAAAGGAGTGACTGCTAGCAGTATTGGCCTTCTTCTCAAAGCTTGCGGACTTCGAGTTACTTCCATTAAAATTGATCCTTACCTAAACACCGATGCCGGAACTATGTCCCCAGTTGAGCATGGGGAAGTGTTTGTGTTGGATGATGGTGGTGAGGTGGACTTGGACCTTGGAAACTATGAACGATTTCTAGATATCAAGCTGACCCGTGATAATAATATTACTACTGGAAAGATTTACCAGGATGTTATTGACAGAGAGAGAAGGGGAGATTATCTGGGAAAAACTGTCCAGGTTGTCCCTCACATCACAGATGCAATCCAAGAGTGGATCGAGCGTGTAGCGAAAATTCCGGTGGATGGACAGTCAGGTGCAGCTGATGTTTGTGTCATCGAATTGGGTGGAACTATAGGTGATATTGAATCCATGCCCTTCATTGAGGCACTAGGACAGTTCTCATACCGCGTCGGTAGTGACAACTTTTGCTTGATTCATGTGAGCCTTGTGCCTGTTTTGAATGTTGTTGGTGAGCAGAAAACAAAACCAACGCAACACAGCGTTCGTGGACTGAGATGTCTGGGTTTGACACCGCATATCATAGCTTGTCGCAGTACAACGGCCCTAGAAGAGAACGTGAAGACAAAAATCAGTCAATTTTGCCATGTACAGAAAGAGAACGTCATCACTCTCTACGACGTTCCCAACATCTGGCATATTCCATTACTTTTAAGAGATCAGAAAGCTCATGAAGCAATCTTCAAAGTGCTCAACCTTCAAGGATTAACGAAGGAACCTGAATTGGAAGAGTGGACTTCTAGGGCTGAAACTTGTGACAAGTTGCATGACCCGGTTCGAATTGCCATGGTCGGAAAGTATACAAGCCTTACAGATGCCTACCTTTCAGTACAAAAGGCTCTTGTGCACGCTTCTGTTGCTCGTGGCAAAAAACTTTTTGTGGATTGGGTGTCGGCTGAAGACCTTGAAGAAGCAACTGCAAAAGAGAACCCTGATGCCTATAAAGCTGCATGGAAGTTATTGAAGGGTGCAGATGGTATGCTTGTTCCCGGAGGGTTCGGTGACAGAGGAGTGGAAGGGAAAATTCTTGCTGCAAAATACGCCCGGGAAAAGAGAATTCCATTCCTTGGCATTTGTCTAGGAATGCAGATTGCTGTGATTGAGGTTGCGCGATCTGTTCTCGGTCTGAAAGATGCTCATAGCACAGAATTTGATCCTGACACTAAAAACCCCTGTGTGATATTCATGCCTGAGGGCTCGAAAACACATATGGGAGGCACGATGCGTGTTGGATCCAGGAGAACCTACTTTCAGCCTGCAGACTGCAAATCAGCTAAACTATATGGAAACAAACGCTTCATTGATGAGAGACATCGGCACAGATATGAGGTGAATCCTGAAATGGTAGCACGCCTTGAAAATTCCGGTCTCTCTTTTACTGGCAAGGATGAAACTGGCCAACGCATGGAGATTGTTGAGCTGCGTAATCATCCATATTTCATCGGTGTCCAGTTCCATCCTGAATTTAAATCAAGACCAGGAAAACCTTCTGCTCTATTCTTAGGGCTTATAGCTGCAGCATGTGGACAGTTGGACAATCTCTTTCCGGGCTCCGAAAGCAAAAGAAACGTCCCAAATGTAGCTGCCAATGACATGTTGTCCCAAAGGAATATTGTCCCAAATGGAGCAAGCAATGACATGTTGTCCCAAAGGACCACTGTTCCAAATGCAGCAAGCAATCATGTGTTCCCAGCAGCATGCGGGAGGAATGTCCCAAAAGGAGCAACAAAAGCATACCAAAACGGAGCTGTAACGAAGTTTGCCAATCGAGCACAAGACAGTGAATACAGCATTTTCAAAGGAATGCACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

644

Amino Acids

70.69

Weight (kDa)

7.9

Isoelectric Point (pI)

36.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 272	5.5e-125	CTP synthase N-terminus
GATase	PF00117	309 - 543	8.1e-45	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30820 AT2G34890 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320
fragaria_vesca	FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530
malus_domestica	MD00G1085100.v1.1 MD10G1221000.v1.1
prunus_persica	Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1
pyrus_communis	pycom05g21790 pycom10g18670
rosa_chinensis	RchiOBHm_Chr5g0022491
rosa_laevigata	RLG00000032665
rosa_multiflora	Rmu_sc0001514.1_g000012
rosa_roxburghii	Rroxscaffold_1G00056550
rosa_rugosa	Rorug05G0074200
rosa_samantha	Rh5AG161000 Rh5CG174300 Rh5DG160600
rosa_wichuraiana	Rw5G014350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	615
AccB7I	CCANNNNNTGG	3 cut(s)	750, 1184, 1522
AccI	GTMKAC	1 cut(s)	917
AccII	CGCG	2 cut(s)	507, 1228
AciI	CCGC	4 cut(s)	90, 505, 632, 1818
AclWI	GGATC	5 cut(s)	113, 380, 1265, 1344, 1357
AcoI	YGGCCR	1 cut(s)	1513
AcsI	RAATTY	6 cut(s)	390, 1140, 1173, 1265, 1477, 1580
AcuI	CTGAAG	1 cut(s)	1035
AfaI	GTAC	3 cut(s)	655, 708, 948
AfiI	CCNNNNNNNGG	4 cut(s)	401, 750, 1184, 1522
AflIII	ACRYGT	2 cut(s)	1710, 1755
AgsI	TTSAA	8 cut(s)	464, 559, 802, 818, 1025, 1081, 1475, 1915
AhdI	GACNNNNNGTC	2 cut(s)	1714, 1759
AjnI	CCWGG	4 cut(s)	282, 333, 1352, 1594
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
Alw21I	GWGCWC	3 cut(s)	810, 966, 1891
Alw26I	GTCTC	2 cut(s)	1420, 1490
Alw44I	GTGCAC	1 cut(s)	962
AlwI	GGATC	5 cut(s)	113, 380, 1265, 1344, 1357
Ama87I	CYCGRG	1 cut(s)	1161
AoxI	GGCC	3 cut(s)	70, 660, 1513
ApaLI	GTGCAC	1 cut(s)	962
ApeKI	GCWGC	9 cut(s)	416, 1064, 1148, 1537, 1631, 1634, 1700, 1787, 1811
ApoI	RAATTY	6 cut(s)	390, 1140, 1173, 1265, 1477, 1580
ArsI	GACNNNNNNTTYG	2 cut(s)	1671, 1703
Asp700I	GAANNNNTTC	2 cut(s)	228, 1603
AspLEI	GCGC	1 cut(s)	1228
AspS9I	GGNCC	3 cut(s)	208, 661, 1770
AsuC2I	CCSGG	5 cut(s)	890, 1107, 1162, 1163, 1665
AsuHPI	GGTGA	6 cut(s)	28, 206, 467, 581, 1130, 1459
AsuII	TTCGAA	1 cut(s)	895
AsuNHI	GCTAGC	1 cut(s)	59
AvaI	CYCGRG	1 cut(s)	1161
AvaII	GGWCC	2 cut(s)	208, 1770
AxyI	CCTNAGG	1 cut(s)	1308
BaeGI	GKGCMC	1 cut(s)	966
BalI	TGGCCA	1 cut(s)	1515
BamHI	GGATCC	1 cut(s)	1349
BanII	GRGCYC	2 cut(s)	1316, 1670
BauI	CACGAG	1 cut(s)	978
BbsI	GAAGAC	2 cut(s)	686, 1023
Bbv12I	GWGCWC	3 cut(s)	810, 966, 1891
BbvI	GCAGC	9 cut(s)	428, 1051, 1135, 1524, 1618, 1646, 1687, 1799, 1823
BccI	CCATC	4 cut(s)	182, 395, 1085, 1581
BceAI	ACGGC	1 cut(s)	675
BciT130I	CCWGG	4 cut(s)	284, 335, 1354, 1596
BcnI	CCSGG	5 cut(s)	890, 1107, 1162, 1163, 1665
BcoDI	GTCTC	2 cut(s)	1420, 1490
BfaI	CTAG	6 cut(s)	60, 233, 488, 665, 858, 1196
BfmI	CTRYAG	3 cut(s)	450, 1374, 1632
BisI	GCNGC	9 cut(s)	417, 1065, 1149, 1538, 1632, 1635, 1701, 1788, 1812
BlsI	GCNGC	9 cut(s)	418, 1066, 1150, 1539, 1633, 1636, 1702, 1789, 1813
Bme1390I	CCNGG	9 cut(s)	284, 335, 890, 1107, 1162, 1163, 1354, 1596, 1665
Bme18I	GGWCC	2 cut(s)	208, 1770
BmeRI	GACNNNNNGTC	2 cut(s)	1714, 1759
BmeT110I	CYCGRG	1 cut(s)	1161
BmgT120I	GGNCC	3 cut(s)	208, 661, 1770
BmiI	GGNNCC	3 cut(s)	834, 1351, 1669
BmrFI	CCNGG	9 cut(s)	284, 335, 890, 1107, 1162, 1163, 1354, 1596, 1665
BmrI	ACTGGG	1 cut(s)	149
BmsI	GCATC	6 cut(s)	127, 346, 922, 1042, 1240, 1329
BmtI	GCTAGC	1 cut(s)	63
BmuI	ACTGGG	1 cut(s)	149
BpiI	GAAGAC	2 cut(s)	686, 1023
Bpu14I	TTCGAA	1 cut(s)	895
BpuMI	CCSGG	5 cut(s)	890, 1107, 1162, 1163, 1665
BsaI	GGTCTC	1 cut(s)	1490
BsaJI	CCNNGG	4 cut(s)	211, 903, 1161, 1183
BsaWI	WCCGGW	2 cut(s)	394, 1481
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	4 cut(s)	401, 750, 1184, 1522
Bse1I	ACTGG	5 cut(s)	155, 274, 1501, 1516, 1567
Bse21I	CCTNAGG	1 cut(s)	1308
Bse3DI	GCAATG	1 cut(s)	1756
BseBI	CCWGG	4 cut(s)	284, 335, 1354, 1596
BseDI	CCNNGG	4 cut(s)	211, 903, 1161, 1183
BseGI	GGATG	6 cut(s)	190, 292, 406, 1510, 1546, 1573
BseLI	CCNNNNNNNGG	4 cut(s)	401, 750, 1184, 1522
BseMI	GCAATG	1 cut(s)	1756
BseMII	CTCAG	2 cut(s)	602, 1299
BseNI	ACTGG	5 cut(s)	155, 274, 1501, 1516, 1567
BseRI	GAGGAG	2 cut(s)	39, 1140
BseSI	GKGCMC	1 cut(s)	966
BseXI	GCAGC	9 cut(s)	428, 1051, 1135, 1524, 1618, 1646, 1687, 1799, 1823
BseYI	CCCAGC	1 cut(s)	1807
BsgI	GTGCAG	2 cut(s)	435, 1107
Bsh1236I	CGCG	2 cut(s)	507, 1228
BshFI	GGCC	3 cut(s)	72, 662, 1515
BsiHKAI	GWGCWC	3 cut(s)	810, 966, 1891
BsiHKCI	CYCGRG	1 cut(s)	1161
BsiSI	CCGG	7 cut(s)	141, 395, 890, 1107, 1162, 1482, 1664
BslFI	GGGAC	7 cut(s)	136, 326, 1673, 1702, 1718, 1747, 1814
BslI	CCNNNNNNNGG	4 cut(s)	401, 750, 1184, 1522
BsmAI	GTCTC	2 cut(s)	1420, 1490
BsmFI	GGGAC	7 cut(s)	136, 326, 1673, 1702, 1718, 1747, 1814
BsmI	GAATGC	2 cut(s)	1206, 1926
BsnI	GGCC	3 cut(s)	72, 662, 1515
Bso31I	GGTCTC	1 cut(s)	1490
BsoBI	CYCGRG	1 cut(s)	1161
Bsp119I	TTCGAA	1 cut(s)	895
Bsp1286I	GDGCHC	5 cut(s)	810, 966, 1316, 1670, 1891
Bsp1407I	TGTACA	1 cut(s)	706
Bsp143I	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
Bsp19I	CCATGG	1 cut(s)	903
BspACI	CCGC	4 cut(s)	90, 505, 632, 1818
BspANI	GGCC	3 cut(s)	72, 662, 1515
BspCNI	CTCAG	2 cut(s)	603, 1300
BspFNI	CGCG	2 cut(s)	507, 1228
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	3 cut(s)	834, 1351, 1669
BspMAI	CTGCAG	2 cut(s)	1378, 1636
BspOI	GCTAGC	1 cut(s)	63
BspPI	GGATC	5 cut(s)	113, 380, 1265, 1344, 1357
BspT104I	TTCGAA	1 cut(s)	895
BspTNI	GGTCTC	1 cut(s)	1490
BsrDI	GCAATG	1 cut(s)	1756
BsrGI	TGTACA	1 cut(s)	706
BsrI	ACTGG	5 cut(s)	155, 274, 1501, 1516, 1567
BssECI	CCNNGG	4 cut(s)	211, 903, 1161, 1183
BssMI	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
BssNAI	GTATAC	1 cut(s)	918
BssSI	CACGAG	1 cut(s)	978
BssT1I	CCWWGG	3 cut(s)	211, 903, 1183
Bst1107I	GTATAC	1 cut(s)	918
Bst2BI	CACGAG	1 cut(s)	978
Bst2UI	CCWGG	4 cut(s)	284, 335, 1354, 1596
Bst4CI	ACNGT	6 cut(s)	331, 408, 495, 1647, 1777, 1898
Bst6I	CTCTTC	2 cut(s)	663, 840
BstAUI	TGTACA	1 cut(s)	706
BstBI	TTCGAA	1 cut(s)	895
BstC8I	GCNNGC	8 cut(s)	61, 88, 966, 1374, 1468, 1747, 1792, 1816
BstDEI	CTNAG	3 cut(s)	611, 1308, 1618
BstDSI	CCRYGG	1 cut(s)	903
BstF5I	GGATG	6 cut(s)	190, 292, 406, 1510, 1546, 1573
BstFNI	CGCG	2 cut(s)	507, 1228
BstHHI	GCGC	1 cut(s)	1228
BstKTI	GATC	6 cut(s)	121, 375, 778, 1232, 1273, 1352
BstMAI	GTCTC	2 cut(s)	1420, 1490
BstMBI	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
BstMWI	GCNNNNNNNGC	8 cut(s)	69, 791, 974, 1061, 1157, 1674, 1847, 1886
BstNI	CCWGG	4 cut(s)	284, 335, 1354, 1596
BstNSI	RCATGY	4 cut(s)	1641, 1714, 1759, 1818
BstSCI	CCNGG	9 cut(s)	282, 333, 888, 1105, 1160, 1161, 1352, 1594, 1663
BstSFI	CTRYAG	3 cut(s)	450, 1374, 1632
BstSLI	GKGCMC	1 cut(s)	966
BstUI	CGCG	2 cut(s)	507, 1228
BstV1I	GCAGC	9 cut(s)	428, 1051, 1135, 1524, 1618, 1646, 1687, 1799, 1823
BstV2I	GAAGAC	2 cut(s)	686, 1023
BstX2I	RGATCY	1 cut(s)	1349
BstYI	RGATCY	1 cut(s)	1349
BstZ17I	GTATAC	1 cut(s)	918
Bsu36I	CCTNAGG	1 cut(s)	1308
BsuRI	GGCC	3 cut(s)	72, 662, 1515
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	6 cut(s)	190, 292, 406, 1510, 1546, 1573
BtsIMutI	CAGTG	2 cut(s)	1773, 1903
Cac8I	GCNNGC	8 cut(s)	61, 88, 966, 1374, 1468, 1747, 1792, 1816
CciI	TCATGA	1 cut(s)	787
CfoI	GCGC	1 cut(s)	1228
Cfr13I	GGNCC	3 cut(s)	208, 661, 1770
Cfr9I	CCCGGG	1 cut(s)	1161
CseI	GACGC	1 cut(s)	496
Csp6I	GTAC	3 cut(s)	654, 707, 947
CviQI	GTAC	3 cut(s)	654, 707, 947
DdeI	CTNAG	3 cut(s)	611, 1308, 1618
DpnI	GATC	6 cut(s)	120, 374, 777, 1231, 1272, 1351
DpnII	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
DraI	TTTAAA	1 cut(s)	1585
DrdI	GACNNNNNNGTC	1 cut(s)	615
DriI	GACNNNNNGTC	2 cut(s)	1714, 1759
DseDI	GACNNNNNNGTC	1 cut(s)	615
EaeI	YGGCCR	1 cut(s)	1513
Eam1104I	CTCTTC	2 cut(s)	663, 840
Eam1105I	GACNNNNNGTC	2 cut(s)	1714, 1759
EarI	CTCTTC	2 cut(s)	663, 840
Eco130I	CCWWGG	3 cut(s)	211, 903, 1183
Eco24I	GRGCYC	2 cut(s)	1316, 1670
Eco31I	GGTCTC	1 cut(s)	1490
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	2 cut(s)	208, 1770
Eco57I	CTGAAG	1 cut(s)	1035
Eco81I	CCTNAGG	1 cut(s)	1308
Eco88I	CYCGRG	1 cut(s)	1161
EcoRI	GAATTC	1 cut(s)	1173
EcoRII	CCWGG	4 cut(s)	282, 333, 1352, 1594
EcoRV	GATATC	1 cut(s)	238
EcoT14I	CCWWGG	3 cut(s)	211, 903, 1183
EcoT38I	GRGCYC	2 cut(s)	1316, 1670
ErhI	CCWWGG	3 cut(s)	211, 903, 1183
FaqI	GGGAC	7 cut(s)	136, 326, 1673, 1702, 1718, 1747, 1814
FauI	CCCGC	1 cut(s)	1811
FauNDI	CATATG	1 cut(s)	1326
FblI	GTMKAC	1 cut(s)	917
Fnu4HI	GCNGC	9 cut(s)	417, 1065, 1149, 1538, 1632, 1635, 1701, 1788, 1812
FokI	GGATG	6 cut(s)	197, 299, 413, 1517, 1533, 1560
FriOI	GRGCYC	2 cut(s)	1316, 1670
Fsp4HI	GCNGC	9 cut(s)	417, 1065, 1149, 1538, 1632, 1635, 1701, 1788, 1812
FspBI	CTAG	6 cut(s)	60, 233, 488, 665, 858, 1196
GlaI	GCGC	1 cut(s)	1227
GluI	GCNGC	9 cut(s)	417, 1065, 1149, 1538, 1632, 1635, 1701, 1788, 1812
GsaI	CCCAGC	1 cut(s)	1811
HaeIII	GGCC	3 cut(s)	72, 662, 1515
HapII	CCGG	7 cut(s)	141, 395, 890, 1107, 1162, 1482, 1664
HgaI	GACGC	1 cut(s)	496
HhaI	GCGC	1 cut(s)	1228
Hin6I	GCGC	1 cut(s)	1226
HinP1I	GCGC	1 cut(s)	1226
HindIII	AAGCTT	1 cut(s)	84
HinfI	GANTC	3 cut(s)	464, 532, 1450
HpaII	CCGG	7 cut(s)	141, 395, 890, 1107, 1162, 1482, 1664
HphI	GGTGA	6 cut(s)	28, 206, 467, 581, 1130, 1459
Hpy166II	GTNNAC	7 cut(s)	38, 202, 608, 852, 918, 964, 1643
Hpy188I	TCNGA	4 cut(s)	780, 911, 1245, 1672
Hpy188III	TCNNGA	6 cut(s)	233, 788, 1274, 1454, 1577, 1590
Hpy8I	GTNNAC	7 cut(s)	38, 202, 608, 852, 918, 964, 1643
Hpy99I	CGWCG	2 cut(s)	512, 740
HpyAV	CCTTC	8 cut(s)	83, 300, 484, 823, 824, 1075, 1127, 1614
HpyCH4III	ACNGT	6 cut(s)	331, 408, 495, 1647, 1777, 1898
HpyCH4IV	ACGT	4 cut(s)	675, 720, 738, 1686
HpyF10VI	GCNNNNNNNGC	8 cut(s)	69, 791, 974, 1061, 1157, 1674, 1847, 1886
HpyF3I	CTNAG	3 cut(s)	611, 1308, 1618
HpySE526I	ACGT	4 cut(s)	675, 720, 738, 1686
HspAI	GCGC	1 cut(s)	1226
Kzo9I	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
LmnI	GCTCC	4 cut(s)	1673, 1742, 1838, 1862
Lsp1109I	GCAGC	9 cut(s)	428, 1051, 1135, 1524, 1618, 1646, 1687, 1799, 1823
LweI	GCATC	6 cut(s)	127, 346, 922, 1042, 1240, 1329
MaeI	CTAG	6 cut(s)	60, 233, 488, 665, 858, 1196
MaeII	ACGT	4 cut(s)	675, 720, 738, 1686
MaeIII	GTNAC	7 cut(s)	16, 52, 100, 515, 872, 1118, 1867
MalI	GATC	6 cut(s)	120, 374, 777, 1231, 1272, 1351
MboI	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
MboII	GAAGA	7 cut(s)	68, 680, 691, 790, 857, 1028, 1037
MflI	RGATCY	1 cut(s)	1349
MhlI	GDGCHC	5 cut(s)	810, 966, 1316, 1670, 1891
MlsI	TGGCCA	1 cut(s)	1515
MluNI	TGGCCA	1 cut(s)	1515
MmeI	TCCRAC	4 cut(s)	162, 889, 1327, 1629
Mox20I	TGGCCA	1 cut(s)	1515
MroXI	GAANNNNTTC	2 cut(s)	228, 1603
MscI	TGGCCA	1 cut(s)	1515
MseI	TTAA	4 cut(s)	111, 770, 824, 1584
MslI	CAYNNNNRTG	1 cut(s)	1440
Msp20I	TGGCCA	1 cut(s)	1515
MspA1I	CMGCKG	1 cut(s)	419
MspI	CCGG	7 cut(s)	141, 395, 890, 1107, 1162, 1482, 1664
MspR9I	CCNGG	9 cut(s)	284, 335, 890, 1107, 1162, 1163, 1354, 1596, 1665
Mva1269I	GAATGC	2 cut(s)	1206, 1926
MvaI	CCWGG	4 cut(s)	284, 335, 1354, 1596
MvnI	CGCG	2 cut(s)	507, 1228
MwoI	GCNNNNNNNGC	8 cut(s)	69, 791, 974, 1061, 1157, 1674, 1847, 1886
NciI	CCSGG	5 cut(s)	890, 1107, 1162, 1163, 1665
NcoI	CCATGG	1 cut(s)	903
NdeI	CATATG	1 cut(s)	1326
NdeII	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
NheI	GCTAGC	1 cut(s)	59
NlaIV	GGNNCC	3 cut(s)	834, 1351, 1669
NmuCI	GTSAC	5 cut(s)	16, 52, 515, 872, 1118
NspI	RCATGY	4 cut(s)	1641, 1714, 1759, 1818
NspV	TTCGAA	1 cut(s)	895
PaeI	GCATGC	1 cut(s)	1818
PagI	TCATGA	1 cut(s)	787
PciI	ACATGT	2 cut(s)	1710, 1755
PctI	GAATGC	2 cut(s)	1206, 1926
PdmI	GAANNNNTTC	2 cut(s)	228, 1603
PfeI	GAWTC	3 cut(s)	464, 532, 1450
PflMI	CCANNNNNTGG	3 cut(s)	750, 1184, 1522
PfoI	TCCNGGA	2 cut(s)	1105, 1352
PkrI	GCNGC	9 cut(s)	418, 1066, 1150, 1539, 1633, 1636, 1702, 1789, 1813
PscI	ACATGT	2 cut(s)	1710, 1755
Psp6I	CCWGG	4 cut(s)	282, 333, 1352, 1594
PspFI	CCCAGC	1 cut(s)	1807
PspGI	CCWGG	4 cut(s)	282, 333, 1352, 1594
PspN4I	GGNNCC	3 cut(s)	834, 1351, 1669
PspPI	GGNCC	3 cut(s)	208, 661, 1770
PstI	CTGCAG	2 cut(s)	1378, 1636
PsuI	RGATCY	1 cut(s)	1349
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	3 cut(s)	655, 708, 948
RsaNI	GTAC	3 cut(s)	654, 707, 947
RseI	CAYNNNNRTG	1 cut(s)	1440
SaqAI	TTAA	4 cut(s)	111, 770, 824, 1584
SatI	GCNGC	9 cut(s)	417, 1065, 1149, 1538, 1632, 1635, 1701, 1788, 1812
Sau3AI	GATC	6 cut(s)	118, 372, 775, 1229, 1270, 1349
Sau96I	GGNCC	3 cut(s)	208, 661, 1770
ScrFI	CCNGG	9 cut(s)	284, 335, 890, 1107, 1162, 1163, 1354, 1596, 1665
SduI	GDGCHC	5 cut(s)	810, 966, 1316, 1670, 1891
SfaNI	GCATC	6 cut(s)	127, 346, 922, 1042, 1240, 1329
SfcI	CTRYAG	3 cut(s)	450, 1374, 1632
SfuI	TTCGAA	1 cut(s)	895
SinI	GGWCC	2 cut(s)	208, 1770
SmaI	CCCGGG	1 cut(s)	1163
SmiI	ATTTAAAT	1 cut(s)	1585
SmiMI	CAYNNNNRTG	1 cut(s)	1440
SphI	GCATGC	1 cut(s)	1818
SsiI	CCGC	4 cut(s)	90, 505, 632, 1818
SspI	AATATT	2 cut(s)	262, 1729
SspMI	CTAG	6 cut(s)	60, 233, 488, 665, 858, 1196
StyD4I	CCNGG	9 cut(s)	282, 333, 888, 1105, 1160, 1161, 1352, 1594, 1663
StyI	CCWWGG	3 cut(s)	211, 903, 1183
SwaI	ATTTAAAT	1 cut(s)	1585
TaaI	ACNGT	6 cut(s)	331, 408, 495, 1647, 1777, 1898
TaiI	ACGT	4 cut(s)	678, 723, 741, 1689
TaqI	TCGA	6 cut(s)	97, 375, 435, 895, 1316, 1885
TaqII	GACCGA	1 cut(s)	1229
TatI	WGTACW	3 cut(s)	653, 706, 946
TfiI	GAWTC	3 cut(s)	464, 532, 1450
Tru1I	TTAA	4 cut(s)	111, 770, 824, 1584
Tru9I	TTAA	4 cut(s)	111, 770, 824, 1584
TscAI	CASTG	2 cut(s)	1780, 1903
TseFI	GTSAC	5 cut(s)	16, 52, 515, 872, 1118
TseI	GCWGC	9 cut(s)	416, 1064, 1148, 1537, 1631, 1634, 1700, 1787, 1811
Tsp45I	GTSAC	5 cut(s)	16, 52, 515, 872, 1118
TspDTI	ATGAA	9 cut(s)	17, 237, 466, 524, 804, 1291, 1405, 1521, 1546
TspGWI	ACGGA	1 cut(s)	1875
TspMI	CCCGGG	1 cut(s)	1161
TspRI	CASTG	2 cut(s)	1780, 1903
Van91I	CCANNNNNTGG	3 cut(s)	750, 1184, 1522
VneI	GTGCAC	1 cut(s)	962
VpaK11BI	GGWCC	2 cut(s)	208, 1770
XapI	RAATTY	6 cut(s)	390, 1140, 1173, 1265, 1477, 1580
XbaI	TCTAGA	1 cut(s)	232
XceI	RCATGY	4 cut(s)	1641, 1714, 1759, 1818
XmaI	CCCGGG	1 cut(s)	1161
XmiI	GTMKAC	1 cut(s)	917
XmnI	GAANNNNTTC	2 cut(s)	228, 1603
XspI	CTAG	6 cut(s)	60, 233, 488, 665, 858, 1196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.