Protein kinase superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13040 |
| malus_domestica | MD05G1245500.v1.1 MD10G1226800.v1.1 |
| prunus_persica | Prupe.4G118400_v2.0.a1 |
| pyrus_communis | pycom05g22160 pycom10g19070 |
| rosa_chinensis | RchiOBHm_Chr5g0021231 |
| rosa_laevigata | RLG00000032597 |
| rosa_multiflora | Rmu_sc0003392.1_g000017 Rmu_sc0004847.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057270 |
| rosa_rugosa | Rorug05G0065300 |
| rosa_samantha | Rh5AG154400 Rh5BG154000 Rh5CG167600 Rh5DG154500 |
| rosa_wichuraiana | Rw5G013760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 368 |
| Acc36I | ACCTGC | 1 cut(s) | 1027 |
| Acc65I | GGTACC | 1 cut(s) | 1476 |
| AccB1I | GGYRCC | 1 cut(s) | 1476 |
| AccBSI | CCGCTC | 1 cut(s) | 2001 |
| AccII | CGCG | 1 cut(s) | 562 |
| AccIII | TCCGGA | 2 cut(s) | 414, 1795 |
| AciI | CCGC | 5 cut(s) | 542, 560, 935, 1082, 2001 |
| AclWI | GGATC | 6 cut(s) | 440, 567, 580, 687, 953, 2071 |
| AcoI | YGGCCR | 1 cut(s) | 2144 |
| AcsI | RAATTY | 3 cut(s) | 310, 998, 1569 |
| AcuI | CTGAAG | 4 cut(s) | 174, 981, 1115, 1919 |
| AcyI | GRCGYC | 3 cut(s) | 1637, 1965, 2156 |
| AfaI | GTAC | 5 cut(s) | 926, 1041, 1068, 1341, 1478 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1631, 1714, 2046 |
| AhlI | ACTAGT | 1 cut(s) | 1645 |
| Alw26I | GTCTC | 9 cut(s) | 126, 970, 978, 1014, 1114, 1353, 1728, 2048, 2144 |
| AlwI | GGATC | 6 cut(s) | 440, 567, 580, 687, 953, 2071 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 332, 1737, 2089, 2142 |
| Ama87I | CYCGRG | 1 cut(s) | 1604 |
| Aor13HI | TCCGGA | 2 cut(s) | 414, 1795 |
| AoxI | GGCC | 4 cut(s) | 127, 1582, 1867, 2144 |
| ApeKI | GCWGC | 7 cut(s) | 1300, 1725, 1728, 1745, 2014, 2017, 2086 |
| ApoI | RAATTY | 3 cut(s) | 310, 998, 1569 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1228, 1260 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 998, 1331 |
| Asp718I | GGTACC | 1 cut(s) | 1476 |
| AspA2I | CCTAGG | 1 cut(s) | 1024 |
| AspLEI | GCGC | 3 cut(s) | 188, 369, 1430 |
| AspS9I | GGNCC | 7 cut(s) | 127, 341, 982, 1079, 1583, 1697, 1867 |
| AsuC2I | CCSGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| AsuHPI | GGTGA | 9 cut(s) | 420, 455, 545, 899, 1301, 1676, 1796, 2094, 2105 |
| AvaI | CYCGRG | 1 cut(s) | 1604 |
| AvaII | GGWCC | 4 cut(s) | 341, 982, 1079, 1697 |
| AvrII | CCTAGG | 1 cut(s) | 1024 |
| BamHI | GGATCC | 1 cut(s) | 572 |
| BanI | GGYRCC | 1 cut(s) | 1476 |
| BbsI | GAAGAC | 3 cut(s) | 462, 483, 1890 |
| BbvI | GCAGC | 7 cut(s) | 1287, 1712, 1715, 1732, 2026, 2029, 2098 |
| BccI | CCATC | 3 cut(s) | 1138, 1688, 1963 |
| BceAI | ACGGC | 3 cut(s) | 1854, 2131, 2169 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 449, 483, 627, 661, 2055, 2089 |
| BclI | TGATCA | 2 cut(s) | 661, 1618 |
| BcnI | CCSGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| BcoDI | GTCTC | 9 cut(s) | 126, 970, 978, 1014, 1114, 1353, 1728, 2048, 2144 |
| BcuI | ACTAGT | 1 cut(s) | 1645 |
| BfaI | CTAG | 5 cut(s) | 795, 1025, 1200, 1646, 1742 |
| BfmI | CTRYAG | 5 cut(s) | 492, 1034, 1375, 1729, 1910 |
| BfoI | RGCGCY | 1 cut(s) | 189 |
| BfuAI | ACCTGC | 1 cut(s) | 1027 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1766 |
| BisI | GCNGC | 7 cut(s) | 1301, 1726, 1729, 1746, 2015, 2018, 2087 |
| BlnI | CCTAGG | 1 cut(s) | 1024 |
| BlsI | GCNGC | 7 cut(s) | 1302, 1727, 1730, 1747, 2016, 2019, 2088 |
| Bme1390I | CCNGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| Bme18I | GGWCC | 4 cut(s) | 341, 982, 1079, 1697 |
| BmeT110I | CYCGRG | 1 cut(s) | 1604 |
| BmgT120I | GGNCC | 7 cut(s) | 127, 341, 982, 1079, 1583, 1697, 1867 |
| BmiI | GGNNCC | 4 cut(s) | 574, 1182, 1478, 1868 |
| BmrFI | CCNGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| BmsI | GCATC | 3 cut(s) | 408, 1528, 1661 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1467 |
| BpiI | GAAGAC | 3 cut(s) | 462, 483, 1890 |
| BpmI | CTGGAG | 2 cut(s) | 960, 1641 |
| BpuEI | CTTGAG | 2 cut(s) | 1674, 2096 |
| BpuMI | CCSGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| Bsa29I | ATCGAT | 1 cut(s) | 357 |
| BsaAI | YACGTR | 1 cut(s) | 2131 |
| BsaHI | GRCGYC | 3 cut(s) | 1637, 1965, 2156 |
| BsaI | GGTCTC | 1 cut(s) | 1014 |
| BsaJI | CCNNGG | 8 cut(s) | 231, 1024, 1085, 1156, 1603, 1604, 1605, 2147 |
| BsaWI | WCCGGW | 4 cut(s) | 414, 440, 984, 1795 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 299, 329, 858, 888, 1206, 1236 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1631, 1714, 2046 |
| Bse1I | ACTGG | 3 cut(s) | 337, 977, 1658 |
| Bse3DI | GCAATG | 2 cut(s) | 15, 2051 |
| BseAI | TCCGGA | 2 cut(s) | 414, 1795 |
| BseCI | ATCGAT | 1 cut(s) | 357 |
| BseDI | CCNNGG | 8 cut(s) | 231, 1024, 1085, 1156, 1603, 1604, 1605, 2147 |
| BseGI | GGATG | 4 cut(s) | 423, 1149, 1432, 1621 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1631, 1714, 2046 |
| BseMI | GCAATG | 2 cut(s) | 15, 2051 |
| BseNI | ACTGG | 3 cut(s) | 337, 977, 1658 |
| BseRI | GAGGAG | 1 cut(s) | 2099 |
| BseXI | GCAGC | 7 cut(s) | 1287, 1712, 1715, 1732, 2026, 2029, 2098 |
| BseYI | CCCAGC | 2 cut(s) | 2061, 2089 |
| BsgI | GTGCAG | 3 cut(s) | 1401, 1505, 1893 |
| Bsh1236I | CGCG | 1 cut(s) | 562 |
| BshFI | GGCC | 4 cut(s) | 129, 1584, 1869, 2146 |
| BshNI | GGYRCC | 1 cut(s) | 1476 |
| BshVI | ATCGAT | 1 cut(s) | 357 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1604 |
| BsiSI | CCGG | 9 cut(s) | 125, 183, 415, 441, 985, 1547, 1605, 1796, 1888 |
| BslFI | GGGAC | 2 cut(s) | 1648, 1904 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1631, 1714, 2046 |
| BsmAI | GTCTC | 9 cut(s) | 126, 970, 978, 1014, 1114, 1353, 1728, 2048, 2144 |
| BsmFI | GGGAC | 2 cut(s) | 1648, 1904 |
| BsmI | GAATGC | 2 cut(s) | 1012, 1576 |
| BsnI | GGCC | 4 cut(s) | 129, 1584, 1869, 2146 |
| Bso31I | GGTCTC | 1 cut(s) | 1014 |
| BsoBI | CYCGRG | 1 cut(s) | 1604 |
| Bsp13I | TCCGGA | 2 cut(s) | 414, 1795 |
| Bsp1407I | TGTACA | 1 cut(s) | 1066 |
| BspACI | CCGC | 5 cut(s) | 542, 560, 935, 1082, 2001 |
| BspANI | GGCC | 4 cut(s) | 129, 1584, 1869, 2146 |
| BspDI | ATCGAT | 1 cut(s) | 357 |
| BspEI | TCCGGA | 2 cut(s) | 414, 1795 |
| BspFNI | CGCG | 1 cut(s) | 562 |
| BspLI | GGNNCC | 4 cut(s) | 574, 1182, 1478, 1868 |
| BspMAI | CTGCAG | 2 cut(s) | 1038, 1733 |
| BspMI | ACCTGC | 1 cut(s) | 1027 |
| BspPI | GGATC | 6 cut(s) | 440, 567, 580, 687, 953, 2071 |
| BspT107I | GGYRCC | 1 cut(s) | 1476 |
| BspTNI | GGTCTC | 1 cut(s) | 1014 |
| BsrBI | CCGCTC | 1 cut(s) | 2001 |
| BsrDI | GCAATG | 2 cut(s) | 15, 2051 |
| BsrGI | TGTACA | 1 cut(s) | 1066 |
| BsrI | ACTGG | 3 cut(s) | 337, 977, 1658 |
| BssECI | CCNNGG | 8 cut(s) | 231, 1024, 1085, 1156, 1603, 1604, 1605, 2147 |
| BssNI | GRCGYC | 3 cut(s) | 1637, 1965, 2156 |
| BssT1I | CCWWGG | 3 cut(s) | 231, 1024, 1085 |
| Bst4CI | ACNGT | 6 cut(s) | 1262, 1407, 1841, 1895, 1914, 2138 |
| Bst6I | CTCTTC | 3 cut(s) | 217, 217, 1924 |
| BstACI | GRCGYC | 3 cut(s) | 1637, 1965, 2156 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1737 |
| BstAUI | TGTACA | 1 cut(s) | 1066 |
| BstBAI | YACGTR | 1 cut(s) | 2131 |
| BstC8I | GCNNGC | 2 cut(s) | 371, 513 |
| BstDEI | CTNAG | 3 cut(s) | 617, 893, 1751 |
| BstDSI | CCRYGG | 1 cut(s) | 2147 |
| BstF5I | GGATG | 4 cut(s) | 423, 1149, 1432, 1621 |
| BstFNI | CGCG | 1 cut(s) | 562 |
| BstH2I | RGCGCY | 1 cut(s) | 189 |
| BstHHI | GCGC | 3 cut(s) | 188, 369, 1430 |
| BstMAI | GTCTC | 9 cut(s) | 126, 970, 978, 1014, 1114, 1353, 1728, 2048, 2144 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 622, 1276, 1573, 1737, 1766 |
| BstNSI | RCATGY | 1 cut(s) | 515 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1467 |
| BstSCI | CCNGG | 4 cut(s) | 124, 1603, 1604, 1887 |
| BstSFI | CTRYAG | 5 cut(s) | 492, 1034, 1375, 1729, 1910 |
| BstUI | CGCG | 1 cut(s) | 562 |
| BstV1I | GCAGC | 7 cut(s) | 1287, 1712, 1715, 1732, 2026, 2029, 2098 |
| BstV2I | GAAGAC | 3 cut(s) | 462, 483, 1890 |
| BstX2I | RGATCY | 1 cut(s) | 572 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1863 |
| BstYI | RGATCY | 1 cut(s) | 572 |
| Bsu15I | ATCGAT | 1 cut(s) | 357 |
| BsuRI | GGCC | 4 cut(s) | 129, 1584, 1869, 2146 |
| BsuTUI | ATCGAT | 1 cut(s) | 357 |
| BtgI | CCRYGG | 1 cut(s) | 2147 |
| BtsCI | GGATG | 4 cut(s) | 423, 1149, 1432, 1621 |
| BtsIMutI | CAGTG | 3 cut(s) | 984, 1267, 1846 |
| BveI | ACCTGC | 1 cut(s) | 1027 |
| Cac8I | GCNNGC | 2 cut(s) | 371, 513 |
| CaiI | CAGNNNCTG | 4 cut(s) | 332, 1737, 2089, 2142 |
| CfoI | GCGC | 3 cut(s) | 188, 369, 1430 |
| Cfr13I | GGNCC | 7 cut(s) | 127, 341, 982, 1079, 1583, 1697, 1867 |
| Cfr9I | CCCGGG | 1 cut(s) | 1604 |
| ClaI | ATCGAT | 1 cut(s) | 357 |
| CseI | GACGC | 3 cut(s) | 1645, 1973, 2145 |
| Csp6I | GTAC | 5 cut(s) | 925, 1040, 1067, 1340, 1477 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1629, 1664 |
| CviQI | GTAC | 5 cut(s) | 925, 1040, 1067, 1340, 1477 |
| DdeI | CTNAG | 3 cut(s) | 617, 893, 1751 |
| DraI | TTTAAA | 2 cut(s) | 706, 1275 |
| EaeI | YGGCCR | 1 cut(s) | 2144 |
| Eam1104I | CTCTTC | 3 cut(s) | 217, 217, 1924 |
| EarI | CTCTTC | 3 cut(s) | 217, 217, 1924 |
| Eco130I | CCWWGG | 3 cut(s) | 231, 1024, 1085 |
| Eco31I | GGTCTC | 1 cut(s) | 1014 |
| Eco32I | GATATC | 1 cut(s) | 645 |
| Eco47I | GGWCC | 4 cut(s) | 341, 982, 1079, 1697 |
| Eco57I | CTGAAG | 4 cut(s) | 174, 981, 1115, 1919 |
| Eco88I | CYCGRG | 1 cut(s) | 1604 |
| EcoRI | GAATTC | 1 cut(s) | 310 |
| EcoRV | GATATC | 1 cut(s) | 645 |
| EcoT14I | CCWWGG | 3 cut(s) | 231, 1024, 1085 |
| EcoT22I | ATGCAT | 1 cut(s) | 517 |
| ErhI | CCWWGG | 3 cut(s) | 231, 1024, 1085 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 468, 500 |
| FaqI | GGGAC | 2 cut(s) | 1648, 1904 |
| FauI | CCCGC | 1 cut(s) | 1994 |
| FauNDI | CATATG | 1 cut(s) | 1678 |
| FbaI | TGATCA | 2 cut(s) | 661, 1618 |
| Fnu4HI | GCNGC | 7 cut(s) | 1301, 1726, 1729, 1746, 2015, 2018, 2087 |
| FokI | GGATG | 4 cut(s) | 430, 1156, 1419, 1608 |
| Fsp4HI | GCNGC | 7 cut(s) | 1301, 1726, 1729, 1746, 2015, 2018, 2087 |
| FspBI | CTAG | 5 cut(s) | 795, 1025, 1200, 1646, 1742 |
| FspI | TGCGCA | 1 cut(s) | 368 |
| GlaI | GCGC | 3 cut(s) | 187, 368, 1429 |
| GluI | GCNGC | 7 cut(s) | 1301, 1726, 1729, 1746, 2015, 2018, 2087 |
| GsaI | CCCAGC | 2 cut(s) | 2065, 2093 |
| GsuI | CTGGAG | 2 cut(s) | 960, 1641 |
| HaeII | RGCGCY | 1 cut(s) | 189 |
| HaeIII | GGCC | 4 cut(s) | 129, 1584, 1869, 2146 |
| HapII | CCGG | 9 cut(s) | 125, 183, 415, 441, 985, 1547, 1605, 1796, 1888 |
| HgaI | GACGC | 3 cut(s) | 1645, 1973, 2145 |
| HhaI | GCGC | 3 cut(s) | 188, 369, 1430 |
| Hin1I | GRCGYC | 3 cut(s) | 1637, 1965, 2156 |
| Hin6I | GCGC | 3 cut(s) | 186, 367, 1428 |
| HinP1I | GCGC | 3 cut(s) | 186, 367, 1428 |
| HincII | GTYRAC | 4 cut(s) | 265, 1231, 1413, 1819 |
| HindII | GTYRAC | 4 cut(s) | 265, 1231, 1413, 1819 |
| HindIII | AAGCTT | 2 cut(s) | 371, 1277 |
| HinfI | GANTC | 8 cut(s) | 41, 323, 854, 1114, 1346, 1468, 2024, 2033 |
| HpaII | CCGG | 9 cut(s) | 125, 183, 415, 441, 985, 1547, 1605, 1796, 1888 |
| HphI | GGTGA | 9 cut(s) | 420, 455, 545, 899, 1301, 1676, 1796, 2094, 2105 |
| Hpy188I | TCNGA | 7 cut(s) | 153, 307, 1134, 1401, 1437, 1963, 2161 |
| Hpy99I | CGWCG | 1 cut(s) | 2161 |
| HpyAV | CCTTC | 4 cut(s) | 494, 589, 1133, 1139 |
| HpyCH4III | ACNGT | 6 cut(s) | 1262, 1407, 1841, 1895, 1914, 2138 |
| HpyCH4IV | ACGT | 1 cut(s) | 2130 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 622, 1276, 1573, 1737, 1766 |
| HpyF3I | CTNAG | 3 cut(s) | 617, 893, 1751 |
| HpySE526I | ACGT | 1 cut(s) | 2130 |
| Hsp92I | GRCGYC | 3 cut(s) | 1637, 1965, 2156 |
| HspAI | GCGC | 3 cut(s) | 186, 367, 1428 |
| Kpn2I | TCCGGA | 2 cut(s) | 414, 1795 |
| KpnI | GGTACC | 1 cut(s) | 1480 |
| Ksp22I | TGATCA | 2 cut(s) | 661, 1618 |
| Lsp1109I | GCAGC | 7 cut(s) | 1287, 1712, 1715, 1732, 2026, 2029, 2098 |
| LweI | GCATC | 3 cut(s) | 408, 1528, 1661 |
| MaeI | CTAG | 5 cut(s) | 795, 1025, 1200, 1646, 1742 |
| MaeII | ACGT | 1 cut(s) | 2130 |
| MbiI | CCGCTC | 1 cut(s) | 2001 |
| MboII | GAAGA | 9 cut(s) | 204, 207, 234, 332, 467, 488, 1319, 1895, 1911 |
| MflI | RGATCY | 1 cut(s) | 572 |
| MlyI | GAGTC | 3 cut(s) | 1355, 1477, 2018 |
| MmeI | TCCRAC | 6 cut(s) | 453, 1424, 1460, 1801, 2104, 2139 |
| Mph1103I | ATGCAT | 1 cut(s) | 517 |
| MroI | TCCGGA | 2 cut(s) | 414, 1795 |
| MroXI | GAANNNNTTC | 2 cut(s) | 998, 1331 |
| MseI | TTAA | 6 cut(s) | 705, 813, 876, 908, 1274, 1281 |
| MspA1I | CMGCKG | 1 cut(s) | 2089 |
| MspI | CCGG | 9 cut(s) | 125, 183, 415, 441, 985, 1547, 1605, 1796, 1888 |
| MspR9I | CCNGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| MssI | GTTTAAAC | 1 cut(s) | 706 |
| Mva1269I | GAATGC | 2 cut(s) | 1012, 1576 |
| MvnI | CGCG | 1 cut(s) | 562 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 622, 1276, 1573, 1737, 1766 |
| NciI | CCSGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| NdeI | CATATG | 1 cut(s) | 1678 |
| NlaIV | GGNNCC | 4 cut(s) | 574, 1182, 1478, 1868 |
| NsbI | TGCGCA | 1 cut(s) | 368 |
| NsiI | ATGCAT | 1 cut(s) | 517 |
| NspI | RCATGY | 1 cut(s) | 515 |
| PaeI | GCATGC | 1 cut(s) | 515 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 311 |
| PctI | GAATGC | 2 cut(s) | 1012, 1576 |
| PdmI | GAANNNNTTC | 2 cut(s) | 998, 1331 |
| PfeI | GAWTC | 5 cut(s) | 41, 323, 854, 1114, 2033 |
| PflFI | GACNNNGTC | 1 cut(s) | 2155 |
| PkrI | GCNGC | 7 cut(s) | 1302, 1727, 1730, 1747, 2016, 2019, 2088 |
| PleI | GAGTC | 3 cut(s) | 1354, 1476, 2018 |
| PmeI | GTTTAAAC | 1 cut(s) | 706 |
| PpsI | GAGTC | 3 cut(s) | 1354, 1476, 2018 |
| Ppu21I | YACGTR | 1 cut(s) | 2131 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1467 |
| PspFI | CCCAGC | 2 cut(s) | 2061, 2089 |
| PspN4I | GGNNCC | 4 cut(s) | 574, 1182, 1478, 1868 |
| PspPI | GGNCC | 7 cut(s) | 127, 341, 982, 1079, 1583, 1697, 1867 |
| PstI | CTGCAG | 2 cut(s) | 1038, 1733 |
| PstNI | CAGNNNCTG | 4 cut(s) | 332, 1737, 2089, 2142 |
| PsuI | RGATCY | 1 cut(s) | 572 |
| PsyI | GACNNNGTC | 1 cut(s) | 2155 |
| PvuII | CAGCTG | 1 cut(s) | 2089 |
| RsaI | GTAC | 5 cut(s) | 926, 1041, 1068, 1341, 1478 |
| RsaNI | GTAC | 5 cut(s) | 925, 1040, 1067, 1340, 1477 |
| SaqAI | TTAA | 6 cut(s) | 705, 813, 876, 908, 1274, 1281 |
| SatI | GCNGC | 7 cut(s) | 1301, 1726, 1729, 1746, 2015, 2018, 2087 |
| Sau96I | GGNCC | 7 cut(s) | 127, 341, 982, 1079, 1583, 1697, 1867 |
| SchI | GAGTC | 3 cut(s) | 1355, 1477, 2018 |
| ScrFI | CCNGG | 4 cut(s) | 126, 1605, 1606, 1889 |
| SfaNI | GCATC | 3 cut(s) | 408, 1528, 1661 |
| SfcI | CTRYAG | 5 cut(s) | 492, 1034, 1375, 1729, 1910 |
| SinI | GGWCC | 4 cut(s) | 341, 982, 1079, 1697 |
| SmaI | CCCGGG | 1 cut(s) | 1606 |
| SmlI | CTYRAG | 2 cut(s) | 1689, 2111 |
| SmoI | CTYRAG | 2 cut(s) | 1689, 2111 |
| SpeI | ACTAGT | 1 cut(s) | 1645 |
| SphI | GCATGC | 1 cut(s) | 515 |
| SsiI | CCGC | 5 cut(s) | 542, 560, 935, 1082, 2001 |
| SspI | AATATT | 2 cut(s) | 1512, 1541 |
| SspMI | CTAG | 5 cut(s) | 795, 1025, 1200, 1646, 1742 |
| StyD4I | CCNGG | 4 cut(s) | 124, 1603, 1604, 1887 |
| StyI | CCWWGG | 3 cut(s) | 231, 1024, 1085 |
| TaaI | ACNGT | 6 cut(s) | 1262, 1407, 1841, 1895, 1914, 2138 |
| TaiI | ACGT | 1 cut(s) | 2133 |
| TatI | WGTACW | 2 cut(s) | 1066, 1339 |
| TfiI | GAWTC | 5 cut(s) | 41, 323, 854, 1114, 2033 |
| Tru1I | TTAA | 6 cut(s) | 705, 813, 876, 908, 1274, 1281 |
| Tru9I | TTAA | 6 cut(s) | 705, 813, 876, 908, 1274, 1281 |
| TscAI | CASTG | 3 cut(s) | 984, 1267, 1846 |
| TseI | GCWGC | 7 cut(s) | 1300, 1725, 1728, 1745, 2014, 2017, 2086 |
| TspDTI | ATGAA | 8 cut(s) | 26, 375, 468, 476, 770, 1092, 1665, 1911 |
| TspGWI | ACGGA | 3 cut(s) | 154, 739, 1614 |
| TspMI | CCCGGG | 1 cut(s) | 1604 |
| TspRI | CASTG | 3 cut(s) | 984, 1267, 1846 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2155 |
| VpaK11BI | GGWCC | 4 cut(s) | 341, 982, 1079, 1697 |
| XapI | RAATTY | 3 cut(s) | 310, 998, 1569 |
| XceI | RCATGY | 1 cut(s) | 515 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 137 |
| XmaI | CCCGGG | 1 cut(s) | 1604 |
| XmaJI | CCTAGG | 1 cut(s) | 1024 |
| XmnI | GAANNNNTTC | 2 cut(s) | 998, 1331 |
| XspI | CTAG | 5 cut(s) | 795, 1025, 1200, 1646, 1742 |
| Zsp2I | ATGCAT | 1 cut(s) | 517 |