Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0006461

Physical Location & Seq

Genomic Coordinates Reverse (-)

23793680 .. 23802292

Gene Structure 8613 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGGGTTTTGAGCCTTTGGATTGGTATTGCCGCCCGGTGCCCGGTGGGGTCTGGACAAGAGCAGTGGAGAATGCTTTTGGTGCATACACGCCTTGCGCGGTTGATTCTTTAGTTGTCTGCGTTTCTCATTTGGTTGTTCTGGGCCTGTGCATTTATCGAACATGGCGGATCAAGAAGGATTTCAAAGCCCAGAGGTTCTGTTTGCAGTCCAAAGTTTACAATTATATGTTGGGTTTATTGGCTGCTTATTGCACCGCCGAGCCCTTGTTCCGCTTGATCATGGGAATTTCAGTGCTGAATTTAGATGGGCAGATTGGCCTTGCACCATTTGAGTTGTTTTCTCTGATATTAGAGGCCATTACTTGGTGCTCTATGCTGGTAATGATTGGTGTGGAAACTAAGATCTATATCCGTGAGGTCCGATGGTTTGTTAGATTTGCAGTAATTTATACTTTAGTGGGGGATTCCGTGATGCTGAATCTTGTTCTTTCACTAAGGGACTTATACCACAGATCTGTACTATATTTGTACATCAGTGAAGTTGTTGCCCAGGGTTTGTTTGGAATACTTTTGCTTGTGTATATTCCAAAATTGGTCGATTATCCTGGTTATACTCCAATCCGTACTGAATCAATTGATGATGCTGCATATGAAGAACTTCCTGGAGGGGAGCAAATATGTCCTGAGAGGCATGCAAGCATATTGTCAAGAATGTTGTTTTCATGGGTGAATCCACTTATGAAGCTAGGCTATCAAAGACCCATTACAGAGAAAGATATCTGGAAATTGGATACTTGGGATCGTACTGAAACACTGAACAATAAGTTCCAAGCATGTTGGGCTCAGGAACGTCGAAAGCCTAAACCATGGCTTTTAAGAGCATTGAACTCTAGCCTTGGTGCAAGGTTTTGGTTTGGAGGCTTTTGGAAGATCGTGATTGATCTTTCCCAATTTGTGGGGCCGCTTATTTTGAATCATCTCTTACAGTCTATGCAACGAGGGGATCCAGCGTGGATTGGTTACATCTATGCCTTCTTAATATTTGCTGGAGTGGTTGTTGGGGTGTTATGTGAAGCTCAGTATTTTCAGAATGTCATGCGCGTTGGCTTCCGGCTTCGGTCAACCTTGGTTGCTGCTGTATTTCGGAAATCCTTAAGGCTGACTCATGAAGCAAGAAAGAAGTTTGCCTCTGGGAAGATAACCAACTTGATGACAACTGATGCTGAAACACTTCAGCAAATATCCCAATCTCTTCATACTTTGTGGTCAGCTCCATTTCGTATCATTATCTCCATGGTTCTTCTGTATCAGCAATTGGGGGTTGCTTCACTACTTGGTGCCCTCATGTTAGTTCTTTTGTTCCCCCTACAGACATTTGTGATCAGCAAAATGCAGAAATTGTCCAAGGAGGGGTTACAGCGTACAGACAAAAGAATTGGTCTGATGAATGAAATTTTGGCAGCAATGGACACTGTGAAATGTTATGCATGGGAGAGTAGTTTCCAATCCAAGGTGCATAGTGTTCGAACTGATGAGTTGTTCTGGTTTCGAAAAGCATCACTGCTGGGAGCGTGCAATGGATTTATACTAAATAGCACCCCAGTTGTAGTCACTGTGATTTCATTTGGATTGTTCACTTTTCTTGGTGGGGATCTTACACCTTCAAGGGCATTTACTTCACTTTCTCTGTTTGCTGTGCTTCGGTTTCCCCTATTCATGCTTCCTAATATAATAACCCAGGCGGTTAATGCCAATGTATCCTTAAAGCGCCTAGAGGAGCTACTTTTAGCTGAAGAGAGAGTTCTTCTGCCAAACCCTCCTCTTGATCCAGGACTGCCGGCCATCTCAATTAAGAATGGAAACTTTTCTTGGGACTCAAAGGCAGAGAAGCCCACACTGACGGATGTTAATTTGGATATCCCTGTTGGGAGCTTGGTAGCAATTGTTGGCAGTACTGGTGAAGGAAAGACATCACTTATATCTGCAATGCTAGGGGAGCTTCCTTCTGTAGCAGAATCAAGTGTTGTAATGAGAGGAATGGTTGCTTATGTTCCACAAGTTTCATGGATTTTTAATGCAACCGTACGTGACAACATTTTATTTGGATCATACTTTGACTCCGGAAGATATGAGAAGGCAATAGATGTGACTGCATTGAGGCATGACCTGGACTTATTGCCTGGTGGTGATCTGACCGAGATTGGTGAAAGAGGAGTGAATATTAGTGGTGGGCAGAAGCAAAGAGTCTCTATGGCTAGAGCCGTCTACTCCAACTCTGATGTATACATTTTTGATCGATCCTTTGAGTGCTCTGGATGCTCACGTGGCTCGACAGGTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0042946 GO:0042947 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098588 GO:0098805 GO:1901264 GO:1901505 GO:1901656 GO:1902417 GO:1902418

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

781

Amino Acids

87.47

Weight (kDa)

8.81

Isoelectric Point (pI)

35.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	304 - 571	5.9e-37	ABC transporter transmembrane region
ABC_tran	PF00005	633 - 765	3.2e-16	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30400 AT1G30400 AT2G34660 AT2G34660 AT2G34660
fragaria_vesca	FvH4_2g14980 FvH4_2g14980 FvH4_2g14980
malus_domestica	MD05G1275500.v1.1
prunus_persica	Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1
pyrus_communis	pycom05g25670 pycom10g21060
rosa_chinensis	RchiOBHm_Chr5g0015421
rosa_laevigata	RLG00000032198
rosa_multiflora	Rmu_ssc0000168.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061060
rosa_rugosa	Rorug05G0027300
rosa_samantha	Rh5AG120900 Rh5BG119700 Rh5CG130500 Rh5DG118800
rosa_wichuraiana	Rw5G010440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	37, 1337
AccB7I	CCANNNNNTGG	2 cut(s)	363, 955
AccI	GTMKAC	2 cut(s)	2265, 2283
AccII	CGCG	2 cut(s)	98, 1101
AccIII	TCCGGA	1 cut(s)	2120
AciI	CCGC	7 cut(s)	31, 98, 166, 255, 271, 962, 1742
AclWI	GGATC	8 cut(s)	176, 807, 998, 1011, 1659, 1820, 2113, 2292
AcoI	YGGCCR	1 cut(s)	1839
AcsI	RAATTY	3 cut(s)	285, 298, 1452
AcuI	CTGAAG	2 cut(s)	1217, 1812
AcvI	CACGTG	1 cut(s)	2324
AfaI	GTAC	7 cut(s)	519, 530, 625, 805, 1423, 1954, 2085
AfiI	CCNNNNNNNGG	5 cut(s)	41, 363, 955, 1410, 1510
AflII	CTTAAG	1 cut(s)	1153
AgsI	TTSAA	4 cut(s)	184, 886, 973, 1665
AjnI	CCWGG	7 cut(s)	549, 604, 661, 1737, 1828, 2166, 2179
AjuI	GAANNNNNNNTTGG	4 cut(s)	1439, 1471, 1852, 1884
AluBI	AGCT	7 cut(s)	745, 1076, 1271, 1780, 1790, 1932, 1999
AluI	AGCT	7 cut(s)	745, 1076, 1271, 1780, 1790, 1932, 1999
Alw21I	GWGCWC	2 cut(s)	371, 2312
Alw26I	GTCTC	1 cut(s)	2251
AlwI	GGATC	8 cut(s)	176, 807, 998, 1011, 1659, 1820, 2113, 2292
Aor13HI	TCCGGA	1 cut(s)	2120
AoxI	GGCC	5 cut(s)	142, 316, 354, 959, 1839
ApeKI	GCWGC	4 cut(s)	242, 644, 1133, 1460
ApoI	RAATTY	3 cut(s)	285, 298, 1452
Asp700I	GAANNNNTTC	4 cut(s)	179, 657, 1230, 1864
AspLEI	GCGC	3 cut(s)	98, 1101, 1770
AspS9I	GGNCC	3 cut(s)	142, 418, 959
AsuC2I	CCSGG	2 cut(s)	35, 42
AsuHPI	GGTGA	4 cut(s)	739, 1970, 2198, 2216
AsuII	TTCGAA	2 cut(s)	1525, 1549
AvaII	GGWCC	1 cut(s)	418
BaeGI	GKGCMC	2 cut(s)	42, 1342
BamHI	GGATCC	1 cut(s)	1003
BanI	GGYRCC	2 cut(s)	37, 1337
BanII	GRGCYC	2 cut(s)	264, 844
BbrPI	CACGTG	1 cut(s)	2324
Bbv12I	GWGCWC	2 cut(s)	371, 2312
BbvI	GCAGC	4 cut(s)	229, 631, 1120, 1472
BccI	CCATC	3 cut(s)	299, 417, 1850
BceAI	ACGGC	1 cut(s)	2246
BcgI	CGANNNNNNTGC	2 cut(s)	1505, 1539
BciT130I	CCWGG	7 cut(s)	551, 606, 663, 1739, 1830, 2168, 2181
BciVI	GTATCC	2 cut(s)	784, 1768
BclI	TGATCA	2 cut(s)	276, 1380
BcnI	CCSGG	2 cut(s)	35, 42
BcoDI	GTCTC	1 cut(s)	2251
BfaI	CTAG	5 cut(s)	746, 891, 1772, 1991, 2256
BfmI	CTRYAG	2 cut(s)	1367, 2007
BfoI	RGCGCY	1 cut(s)	1771
BfrI	CTTAAG	1 cut(s)	1153
BfuI	GTATCC	2 cut(s)	784, 1768
BglII	AGATCT	2 cut(s)	402, 512
BisI	GCNGC	6 cut(s)	31, 243, 645, 962, 1134, 1461
BlsI	GCNGC	6 cut(s)	32, 244, 646, 963, 1135, 1462
BmcAI	AGTACT	1 cut(s)	1954
Bme1390I	CCNGG	9 cut(s)	35, 42, 551, 606, 663, 1739, 1830, 2168, 2181
Bme18I	GGWCC	1 cut(s)	418
BmgT120I	GGNCC	3 cut(s)	142, 418, 959
BmiI	GGNNCC	4 cut(s)	39, 960, 1005, 1339
BmrFI	CCNGG	9 cut(s)	35, 42, 551, 606, 663, 1739, 1830, 2168, 2181
BmrI	ACTGGG	1 cut(s)	1595
BmsI	GCATC	5 cut(s)	462, 631, 1210, 1565, 2306
BmuI	ACTGGG	1 cut(s)	1595
BpmI	CTGGAG	2 cut(s)	684, 1068
Bpu10I	CCTNAGC	1 cut(s)	843
Bpu14I	TTCGAA	2 cut(s)	1525, 1549
BpuMI	CCSGG	2 cut(s)	35, 42
Bsa29I	ATCGAT	1 cut(s)	2296
BsaAI	YACGTR	2 cut(s)	2087, 2324
BsaBI	GATNNNNATC	1 cut(s)	407
BsaJI	CCNNGG	9 cut(s)	549, 550, 866, 895, 1125, 1293, 1404, 1509, 1737
BsaWI	WCCGGW	1 cut(s)	2120
BsaXI	ACNNNNNCTCC	4 cut(s)	1041, 1071, 2102, 2132
Bsc4I	CCNNNNNNNGG	5 cut(s)	41, 363, 955, 1410, 1510
Bse118I	RCCGGY	1 cut(s)	1837
Bse1I	ACTGG	2 cut(s)	1601, 1960
Bse3DI	GCAATG	3 cut(s)	1470, 1582, 1992
Bse8I	GATNNNNATC	1 cut(s)	407
BseAI	TCCGGA	1 cut(s)	2120
BseBI	CCWGG	7 cut(s)	551, 606, 663, 1739, 1830, 2168, 2181
BseCI	ATCGAT	1 cut(s)	2296
BseDI	CCNNGG	9 cut(s)	549, 550, 866, 895, 1125, 1293, 1404, 1509, 1737
BseGI	GGATG	2 cut(s)	1909, 2321
BseJI	GATNNNNATC	1 cut(s)	407
BseLI	CCNNNNNNNGG	5 cut(s)	41, 363, 955, 1410, 1510
BseMI	GCAATG	3 cut(s)	1470, 1582, 1992
BseMII	CTCAG	3 cut(s)	675, 857, 1091
BseNI	ACTGG	2 cut(s)	1601, 1960
BseRI	GAGGAG	3 cut(s)	1790, 1809, 2226
BseSI	GKGCMC	2 cut(s)	42, 1342
BseXI	GCAGC	4 cut(s)	229, 631, 1120, 1472
BseYI	CCCAGC	1 cut(s)	1564
Bsh1236I	CGCG	2 cut(s)	98, 1101
BshFI	GGCC	5 cut(s)	144, 318, 356, 961, 1841
BshNI	GGYRCC	2 cut(s)	37, 1337
BshVI	ATCGAT	1 cut(s)	2296
BsiHKAI	GWGCWC	2 cut(s)	371, 2312
BsiSI	CCGG	5 cut(s)	35, 42, 1111, 1838, 2121
BsiWI	CGTACG	1 cut(s)	2083
BslFI	GGGAC	2 cut(s)	512, 1886
BslI	CCNNNNNNNGG	5 cut(s)	41, 363, 955, 1410, 1510
BsmAI	GTCTC	1 cut(s)	2251
BsmFI	GGGAC	2 cut(s)	512, 1886
BsmI	GAATGC	1 cut(s)	76
BsnI	GGCC	5 cut(s)	144, 318, 356, 961, 1841
Bsp119I	TTCGAA	2 cut(s)	1525, 1549
Bsp1286I	GDGCHC	6 cut(s)	42, 264, 371, 844, 1342, 2312
Bsp13I	TCCGGA	1 cut(s)	2120
Bsp1407I	TGTACA	1 cut(s)	528
Bsp19I	CCATGG	2 cut(s)	866, 1293
BspACI	CCGC	7 cut(s)	31, 98, 166, 255, 271, 962, 1742
BspANI	GGCC	5 cut(s)	144, 318, 356, 961, 1841
BspCNI	CTCAG	3 cut(s)	676, 856, 1090
BspDI	ATCGAT	1 cut(s)	2296
BspEI	TCCGGA	1 cut(s)	2120
BspFNI	CGCG	2 cut(s)	98, 1101
BspHI	TCATGA	1 cut(s)	1165
BspLI	GGNNCC	4 cut(s)	39, 960, 1005, 1339
BspPI	GGATC	8 cut(s)	176, 807, 998, 1011, 1659, 1820, 2113, 2292
BspT104I	TTCGAA	2 cut(s)	1525, 1549
BspT107I	GGYRCC	2 cut(s)	37, 1337
BspTI	CTTAAG	1 cut(s)	1153
BsrDI	GCAATG	3 cut(s)	1470, 1582, 1992
BsrFI	RCCGGY	1 cut(s)	1837
BsrGI	TGTACA	1 cut(s)	528
BsrI	ACTGG	2 cut(s)	1601, 1960
BssAI	RCCGGY	1 cut(s)	1837
BssECI	CCNNGG	9 cut(s)	549, 550, 866, 895, 1125, 1293, 1404, 1509, 1737
BssNAI	GTATAC	1 cut(s)	2284
BssT1I	CCWWGG	6 cut(s)	866, 895, 1125, 1293, 1404, 1509
Bst1107I	GTATAC	1 cut(s)	2284
Bst2UI	CCWGG	7 cut(s)	551, 606, 663, 1739, 1830, 2168, 2181
Bst4CI	ACNGT	4 cut(s)	987, 1474, 1615, 2083
Bst6I	CTCTTC	2 cut(s)	1257, 1788
BstAFI	CTTAAG	1 cut(s)	1153
BstAUI	TGTACA	1 cut(s)	528
BstBAI	YACGTR	2 cut(s)	2087, 2324
BstBI	TTCGAA	2 cut(s)	1525, 1549
BstC8I	GCNNGC	4 cut(s)	693, 697, 1573, 1839
BstDEI	CTNAG	5 cut(s)	399, 494, 684, 843, 1077
BstDSI	CCRYGG	2 cut(s)	866, 1293
BstF5I	GGATG	2 cut(s)	1909, 2321
BstFNI	CGCG	2 cut(s)	98, 1101
BstH2I	RGCGCY	1 cut(s)	1771
BstHHI	GCGC	3 cut(s)	98, 1101, 1770
BstMAI	GTCTC	1 cut(s)	2251
BstMWI	GCNNNNNNNGC	6 cut(s)	80, 839, 1748, 1996, 2316, 2325
BstNI	CCWGG	7 cut(s)	551, 606, 663, 1739, 1830, 2168, 2181
BstNSI	RCATGY	2 cut(s)	695, 837
BstSCI	CCNGG	9 cut(s)	33, 40, 549, 604, 661, 1737, 1828, 2166, 2179
BstSFI	CTRYAG	2 cut(s)	1367, 2007
BstSLI	GKGCMC	2 cut(s)	42, 1342
BstUI	CGCG	2 cut(s)	98, 1101
BstV1I	GCAGC	4 cut(s)	229, 631, 1120, 1472
BstX2I	RGATCY	4 cut(s)	402, 512, 1003, 1651
BstYI	RGATCY	4 cut(s)	402, 512, 1003, 1651
BstZ17I	GTATAC	1 cut(s)	2284
Bsu15I	ATCGAT	1 cut(s)	2296
BsuI	GTATCC	2 cut(s)	784, 1768
BsuRI	GGCC	5 cut(s)	144, 318, 356, 961, 1841
BsuTUI	ATCGAT	1 cut(s)	2296
BtgI	CCRYGG	2 cut(s)	866, 1293
BtsCI	GGATG	2 cut(s)	1909, 2321
BtsI	GCAGTG	2 cut(s)	69, 1559
BtsIMutI	CAGTG	8 cut(s)	69, 297, 541, 812, 1470, 1559, 1611, 1895
Cac8I	GCNNGC	4 cut(s)	693, 697, 1573, 1839
CciI	TCATGA	1 cut(s)	1165
CfoI	GCGC	3 cut(s)	98, 1101, 1770
Cfr10I	RCCGGY	1 cut(s)	1837
Cfr13I	GGNCC	3 cut(s)	142, 418, 959
ClaI	ATCGAT	1 cut(s)	2296
Csp6I	GTAC	7 cut(s)	518, 529, 624, 804, 1422, 1953, 2084
CspCI	CAANNNNNGTGG	2 cut(s)	45, 80
CviQI	GTAC	7 cut(s)	518, 529, 624, 804, 1422, 1953, 2084
DdeI	CTNAG	5 cut(s)	399, 494, 684, 843, 1077
EaeI	YGGCCR	1 cut(s)	1839
Eam1104I	CTCTTC	2 cut(s)	1257, 1788
EarI	CTCTTC	2 cut(s)	1257, 1788
EciI	GGCGGA	1 cut(s)	181
Eco130I	CCWWGG	6 cut(s)	866, 895, 1125, 1293, 1404, 1509
Eco24I	GRGCYC	2 cut(s)	264, 844
Eco32I	GATATC	2 cut(s)	778, 1918
Eco47I	GGWCC	1 cut(s)	418
Eco57I	CTGAAG	2 cut(s)	1217, 1812
Eco72I	CACGTG	1 cut(s)	2324
EcoRII	CCWGG	7 cut(s)	549, 604, 661, 1737, 1828, 2166, 2179
EcoRV	GATATC	2 cut(s)	778, 1918
EcoT14I	CCWWGG	6 cut(s)	866, 895, 1125, 1293, 1404, 1509
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	2 cut(s)	264, 844
ErhI	CCWWGG	6 cut(s)	866, 895, 1125, 1293, 1404, 1509
FaqI	GGGAC	2 cut(s)	512, 1886
FauNDI	CATATG	1 cut(s)	649
FbaI	TGATCA	2 cut(s)	276, 1380
FblI	GTMKAC	2 cut(s)	2265, 2283
Fnu4HI	GCNGC	6 cut(s)	31, 243, 645, 962, 1134, 1461
FokI	GGATG	2 cut(s)	1916, 2328
FriOI	GRGCYC	2 cut(s)	264, 844
Fsp4HI	GCNGC	6 cut(s)	31, 243, 645, 962, 1134, 1461
FspBI	CTAG	5 cut(s)	746, 891, 1772, 1991, 2256
GlaI	GCGC	3 cut(s)	97, 1100, 1769
GluI	GCNGC	6 cut(s)	31, 243, 645, 962, 1134, 1461
GsaI	CCCAGC	1 cut(s)	1568
GsuI	CTGGAG	2 cut(s)	684, 1068
HaeII	RGCGCY	1 cut(s)	1771
HaeIII	GGCC	5 cut(s)	144, 318, 356, 961, 1841
HapII	CCGG	5 cut(s)	35, 42, 1111, 1838, 2121
HhaI	GCGC	3 cut(s)	98, 1101, 1770
Hin6I	GCGC	3 cut(s)	96, 1099, 1768
HinP1I	GCGC	3 cut(s)	96, 1099, 1768
HincII	GTYRAC	1 cut(s)	1122
HindII	GTYRAC	1 cut(s)	1122
HpaII	CCGG	5 cut(s)	35, 42, 1111, 1838, 2121
HphI	GGTGA	4 cut(s)	739, 1970, 2198, 2216
Hpy166II	GTNNAC	5 cut(s)	217, 1122, 1635, 2266, 2284
Hpy188I	TCNGA	7 cut(s)	345, 422, 1089, 1146, 1443, 2193, 2278
Hpy8I	GTNNAC	5 cut(s)	217, 1122, 1635, 2266, 2284
Hpy99I	CGWCG	1 cut(s)	855
HpyAV	CCTTC	6 cut(s)	169, 1042, 1671, 1955, 2013, 2128
HpyCH4III	ACNGT	4 cut(s)	987, 1474, 1615, 2083
HpyCH4IV	ACGT	3 cut(s)	850, 2086, 2323
HpyF10VI	GCNNNNNNNGC	6 cut(s)	80, 839, 1748, 1996, 2316, 2325
HpyF3I	CTNAG	5 cut(s)	399, 494, 684, 843, 1077
HpySE526I	ACGT	3 cut(s)	850, 2086, 2323
HspAI	GCGC	3 cut(s)	96, 1099, 1768
Kpn2I	TCCGGA	1 cut(s)	2120
KroI	GCCGGC	1 cut(s)	1837
KroNI	GCCGGC	1 cut(s)	1839
Ksp22I	TGATCA	2 cut(s)	276, 1380
LmnI	GCTCC	6 cut(s)	670, 1276, 1568, 1777, 1929, 1996
Lsp1109I	GCAGC	4 cut(s)	229, 631, 1120, 1472
LweI	GCATC	5 cut(s)	462, 631, 1210, 1565, 2306
MaeI	CTAG	5 cut(s)	746, 891, 1772, 1991, 2256
MaeII	ACGT	3 cut(s)	850, 2086, 2323
MaeIII	GTNAC	5 cut(s)	1019, 1413, 1609, 2087, 2146
MboII	GAAGA	8 cut(s)	665, 940, 1207, 1244, 1292, 1796, 1805, 2136
MfeI	CAATTG	3 cut(s)	633, 1313, 1941
MflI	RGATCY	4 cut(s)	402, 512, 1003, 1651
MhlI	GDGCHC	6 cut(s)	42, 264, 371, 844, 1342, 2312
MlyI	GAGTC	4 cut(s)	1156, 1868, 2111, 2253
MmeI	TCCRAC	1 cut(s)	2295
Mph1103I	ATGCAT	1 cut(s)	1489
MroI	TCCGGA	1 cut(s)	2120
MroNI	GCCGGC	1 cut(s)	1837
MroXI	GAANNNNTTC	4 cut(s)	179, 657, 1230, 1864
MseI	TTAA	8 cut(s)	875, 1037, 1154, 1746, 1763, 1851, 1908, 2073
MspCI	CTTAAG	1 cut(s)	1153
MspI	CCGG	5 cut(s)	35, 42, 1111, 1838, 2121
MspR9I	CCNGG	9 cut(s)	35, 42, 551, 606, 663, 1739, 1830, 2168, 2181
MunI	CAATTG	3 cut(s)	633, 1313, 1941
Mva1269I	GAATGC	1 cut(s)	76
MvaI	CCWGG	7 cut(s)	551, 606, 663, 1739, 1830, 2168, 2181
MvnI	CGCG	2 cut(s)	98, 1101
MwoI	GCNNNNNNNGC	6 cut(s)	80, 839, 1748, 1996, 2316, 2325
NaeI	GCCGGC	1 cut(s)	1839
NciI	CCSGG	2 cut(s)	35, 42
NcoI	CCATGG	2 cut(s)	866, 1293
NdeI	CATATG	1 cut(s)	649
NgoMIV	GCCGGC	1 cut(s)	1837
NlaIV	GGNNCC	4 cut(s)	39, 960, 1005, 1339
NmeAIII	GCCGAG	1 cut(s)	283
NmuCI	GTSAC	3 cut(s)	1609, 2087, 2146
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	2 cut(s)	695, 837
NspV	TTCGAA	2 cut(s)	1525, 1549
PaeI	GCATGC	1 cut(s)	695
PagI	TCATGA	1 cut(s)	1165
PasI	CCCWGGG	1 cut(s)	550
PctI	GAATGC	1 cut(s)	76
PdiI	GCCGGC	1 cut(s)	1839
PdmI	GAANNNNTTC	4 cut(s)	179, 657, 1230, 1864
PfeI	GAWTC	7 cut(s)	104, 464, 478, 629, 730, 973, 2015
Pfl23II	CGTACG	1 cut(s)	2083
PflMI	CCANNNNNTGG	2 cut(s)	363, 955
PfoI	TCCNGGA	2 cut(s)	661, 1828
PkrI	GCNGC	6 cut(s)	32, 244, 646, 963, 1135, 1462
PleI	GAGTC	4 cut(s)	1156, 1868, 2111, 2252
PmaCI	CACGTG	1 cut(s)	2324
PmlI	CACGTG	1 cut(s)	2324
PpsI	GAGTC	4 cut(s)	1156, 1868, 2111, 2252
Ppu21I	YACGTR	2 cut(s)	2087, 2324
Psp6I	CCWGG	7 cut(s)	549, 604, 661, 1737, 1828, 2166, 2179
PspCI	CACGTG	1 cut(s)	2324
PspFI	CCCAGC	1 cut(s)	1564
PspGI	CCWGG	7 cut(s)	549, 604, 661, 1737, 1828, 2166, 2179
PspLI	CGTACG	1 cut(s)	2083
PspN4I	GGNNCC	4 cut(s)	39, 960, 1005, 1339
PspPI	GGNCC	3 cut(s)	142, 418, 959
PsuI	RGATCY	4 cut(s)	402, 512, 1003, 1651
RsaI	GTAC	7 cut(s)	519, 530, 625, 805, 1423, 1954, 2085
RsaNI	GTAC	7 cut(s)	518, 529, 624, 804, 1422, 1953, 2084
SaqAI	TTAA	8 cut(s)	875, 1037, 1154, 1746, 1763, 1851, 1908, 2073
SatI	GCNGC	6 cut(s)	31, 243, 645, 962, 1134, 1461
Sau96I	GGNCC	3 cut(s)	142, 418, 959
ScaI	AGTACT	1 cut(s)	1954
SchI	GAGTC	4 cut(s)	1156, 1868, 2111, 2253
ScrFI	CCNGG	9 cut(s)	35, 42, 551, 606, 663, 1739, 1830, 2168, 2181
SduI	GDGCHC	6 cut(s)	42, 264, 371, 844, 1342, 2312
SfaNI	GCATC	5 cut(s)	462, 631, 1210, 1565, 2306
SfcI	CTRYAG	2 cut(s)	1367, 2007
SfuI	TTCGAA	2 cut(s)	1525, 1549
SinI	GGWCC	1 cut(s)	418
SmlI	CTYRAG	1 cut(s)	1153
SmoI	CTYRAG	1 cut(s)	1153
SphI	GCATGC	1 cut(s)	695
SsiI	CCGC	7 cut(s)	31, 98, 166, 255, 271, 962, 1742
SspI	AATATT	2 cut(s)	1041, 2221
SspMI	CTAG	5 cut(s)	746, 891, 1772, 1991, 2256
StyD4I	CCNGG	9 cut(s)	33, 40, 549, 604, 661, 1737, 1828, 2166, 2179
StyI	CCWWGG	6 cut(s)	866, 895, 1125, 1293, 1404, 1509
TaaI	ACNGT	4 cut(s)	987, 1474, 1615, 2083
TaiI	ACGT	3 cut(s)	853, 2089, 2326
TaqI	TCGA	7 cut(s)	157, 597, 853, 1525, 1549, 2296, 2330
TaqII	GACCGA	2 cut(s)	1107, 2210
TatI	WGTACW	3 cut(s)	517, 528, 1952
TauI	GCSGC	2 cut(s)	33, 964
TfiI	GAWTC	7 cut(s)	104, 464, 478, 629, 730, 973, 2015
Tru1I	TTAA	8 cut(s)	875, 1037, 1154, 1746, 1763, 1851, 1908, 2073
Tru9I	TTAA	8 cut(s)	875, 1037, 1154, 1746, 1763, 1851, 1908, 2073
TscAI	CASTG	8 cut(s)	69, 297, 541, 819, 1477, 1566, 1618, 1902
TseFI	GTSAC	3 cut(s)	1609, 2087, 2146
TseI	GCWGC	4 cut(s)	242, 644, 1133, 1460
Tsp45I	GTSAC	3 cut(s)	1609, 2087, 2146
TspGWI	ACGGA	4 cut(s)	401, 457, 611, 1916
TspRI	CASTG	8 cut(s)	69, 297, 541, 819, 1477, 1566, 1618, 1902
Van91I	CCANNNNNTGG	2 cut(s)	363, 955
Vha464I	CTTAAG	1 cut(s)	1153
VpaK11BI	GGWCC	1 cut(s)	418
XapI	RAATTY	3 cut(s)	285, 298, 1452
XceI	RCATGY	2 cut(s)	695, 837
XcmI	CCANNNNNNNNNTGG	2 cut(s)	557, 2061
XmiI	GTMKAC	2 cut(s)	2265, 2283
XmnI	GAANNNNTTC	4 cut(s)	179, 657, 1230, 1864
XspI	CTAG	5 cut(s)	746, 891, 1772, 1991, 2256
ZrmI	AGTACT	1 cut(s)	1954
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.