iq-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33990 |
| fragaria_vesca | FvH4_3g08170 FvH4_3g08170 FvH4_3g08170 FvH4_3g08170 |
| malus_domestica | MD05G1305200.v1.1 MD10G1284500.v1.1 |
| prunus_persica | Prupe.4G057000_v2.0.a1 Prupe.4G057000_v2.0.a1 |
| pyrus_communis | pycom05g28240 pycom10g23760 |
| rosa_chinensis | RchiOBHm_Chr5g0010021 |
| rosa_laevigata | RLG00000031719 |
| rosa_multiflora | Rmu_sc0002275.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00066150 |
| rosa_samantha | Rh5AG079400 Rh5BG074200 Rh5CG086800 Rh5DG074900 |
| rosa_wichuraiana | Rw5G007350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 325 |
| AccBSI | CCGCTC | 1 cut(s) | 265 |
| AciI | CCGC | 4 cut(s) | 182, 265, 376, 581 |
| AclWI | GGATC | 1 cut(s) | 128 |
| AcsI | RAATTY | 1 cut(s) | 472 |
| AcuI | CTGAAG | 1 cut(s) | 627 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 325 |
| AjnI | CCWGG | 1 cut(s) | 395 |
| AluBI | AGCT | 7 cut(s) | 11, 32, 89, 166, 350, 366, 491 |
| AluI | AGCT | 7 cut(s) | 11, 32, 89, 166, 350, 366, 491 |
| AlwI | GGATC | 1 cut(s) | 128 |
| AoxI | GGCC | 1 cut(s) | 300 |
| ApeKI | GCWGC | 2 cut(s) | 248, 386 |
| ApoI | RAATTY | 1 cut(s) | 472 |
| AspS9I | GGNCC | 2 cut(s) | 300, 373 |
| AsuHPI | GGTGA | 2 cut(s) | 408, 468 |
| AvaII | GGWCC | 1 cut(s) | 373 |
| BbvI | GCAGC | 2 cut(s) | 260, 373 |
| BceAI | ACGGC | 1 cut(s) | 390 |
| BciT130I | CCWGG | 1 cut(s) | 397 |
| BfaI | CTAG | 1 cut(s) | 420 |
| BfmI | CTRYAG | 1 cut(s) | 307 |
| BisI | GCNGC | 3 cut(s) | 249, 387, 582 |
| BlsI | GCNGC | 3 cut(s) | 250, 388, 583 |
| Bme1390I | CCNGG | 1 cut(s) | 397 |
| Bme18I | GGWCC | 1 cut(s) | 373 |
| BmgT120I | GGNCC | 2 cut(s) | 300, 373 |
| BmrFI | CCNGG | 1 cut(s) | 397 |
| BmrI | ACTGGG | 1 cut(s) | 449 |
| BmuI | ACTGGG | 1 cut(s) | 449 |
| BpuEI | CTTGAG | 1 cut(s) | 176 |
| BsaJI | CCNNGG | 3 cut(s) | 395, 396, 425 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 325 |
| Bse1I | ACTGG | 1 cut(s) | 455 |
| BseBI | CCWGG | 1 cut(s) | 397 |
| BseDI | CCNNGG | 3 cut(s) | 395, 396, 425 |
| BseGI | GGATG | 1 cut(s) | 217 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 325 |
| BseNI | ACTGG | 1 cut(s) | 455 |
| BseXI | GCAGC | 2 cut(s) | 260, 373 |
| BsgI | GTGCAG | 3 cut(s) | 431, 455, 609 |
| BshFI | GGCC | 1 cut(s) | 302 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 325 |
| BsnI | GGCC | 1 cut(s) | 302 |
| Bsp143I | GATC | 1 cut(s) | 120 |
| BspACI | CCGC | 4 cut(s) | 182, 265, 376, 581 |
| BspANI | GGCC | 1 cut(s) | 302 |
| BspHI | TCATGA | 1 cut(s) | 169 |
| BspMAI | CTGCAG | 1 cut(s) | 311 |
| BspPI | GGATC | 1 cut(s) | 128 |
| BsrBI | CCGCTC | 1 cut(s) | 265 |
| BsrI | ACTGG | 1 cut(s) | 455 |
| BssECI | CCNNGG | 3 cut(s) | 395, 396, 425 |
| BssMI | GATC | 1 cut(s) | 120 |
| BssT1I | CCWWGG | 1 cut(s) | 425 |
| Bst2UI | CCWGG | 1 cut(s) | 397 |
| Bst4CI | ACNGT | 1 cut(s) | 565 |
| BstC8I | GCNNGC | 6 cut(s) | 30, 91, 267, 391, 447, 451 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstF5I | GGATG | 1 cut(s) | 217 |
| BstKTI | GATC | 1 cut(s) | 123 |
| BstMBI | GATC | 1 cut(s) | 120 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 315, 442, 587 |
| BstNI | CCWGG | 1 cut(s) | 397 |
| BstSCI | CCNGG | 1 cut(s) | 395 |
| BstSFI | CTRYAG | 1 cut(s) | 307 |
| BstV1I | GCAGC | 2 cut(s) | 260, 373 |
| BsuRI | GGCC | 1 cut(s) | 302 |
| BtsCI | GGATG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 1 cut(s) | 299 |
| Cac8I | GCNNGC | 6 cut(s) | 30, 91, 267, 391, 447, 451 |
| CciI | TCATGA | 1 cut(s) | 169 |
| Cfr13I | GGNCC | 2 cut(s) | 300, 373 |
| CviAII | CATG | 2 cut(s) | 60, 170 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| DpnI | GATC | 1 cut(s) | 122 |
| DpnII | GATC | 1 cut(s) | 120 |
| EciI | GGCGGA | 1 cut(s) | 197 |
| Eco130I | CCWWGG | 1 cut(s) | 425 |
| Eco47I | GGWCC | 1 cut(s) | 373 |
| Eco57I | CTGAAG | 1 cut(s) | 627 |
| EcoRII | CCWGG | 1 cut(s) | 395 |
| EcoT14I | CCWWGG | 1 cut(s) | 425 |
| EcoT22I | ATGCAT | 1 cut(s) | 283 |
| ErhI | CCWWGG | 1 cut(s) | 425 |
| FaeI | CATG | 2 cut(s) | 63, 173 |
| FatI | CATG | 2 cut(s) | 59, 169 |
| FauI | CCCGC | 1 cut(s) | 258 |
| FauNDI | CATATG | 1 cut(s) | 277 |
| Fnu4HI | GCNGC | 3 cut(s) | 249, 387, 582 |
| FokI | GGATG | 1 cut(s) | 224 |
| Fsp4HI | GCNGC | 3 cut(s) | 249, 387, 582 |
| FspBI | CTAG | 1 cut(s) | 420 |
| GluI | GCNGC | 3 cut(s) | 249, 387, 582 |
| HaeIII | GGCC | 1 cut(s) | 302 |
| Hin1II | CATG | 2 cut(s) | 63, 173 |
| HindIII | AAGCTT | 3 cut(s) | 9, 164, 489 |
| HinfI | GANTC | 2 cut(s) | 96, 142 |
| HphI | GGTGA | 2 cut(s) | 408, 468 |
| Hpy188I | TCNGA | 4 cut(s) | 202, 315, 546, 624 |
| Hpy188III | TCNNGA | 1 cut(s) | 170 |
| HpyAV | CCTTC | 2 cut(s) | 107, 364 |
| HpyCH4III | ACNGT | 1 cut(s) | 565 |
| HpyCH4IV | ACGT | 1 cut(s) | 259 |
| HpyCH4V | TGCA | 6 cut(s) | 224, 281, 309, 412, 436, 590 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 315, 442, 587 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| HpySE526I | ACGT | 1 cut(s) | 259 |
| Hsp92II | CATG | 2 cut(s) | 63, 173 |
| Kzo9I | GATC | 1 cut(s) | 120 |
| LmnI | GCTCC | 1 cut(s) | 363 |
| LpnPI | CCDG | 6 cut(s) | 352, 364, 382, 409, 468, 576 |
| Lsp1109I | GCAGC | 2 cut(s) | 260, 373 |
| MaeI | CTAG | 1 cut(s) | 420 |
| MaeII | ACGT | 1 cut(s) | 259 |
| MaeIII | GTNAC | 2 cut(s) | 106, 414 |
| MalI | GATC | 1 cut(s) | 122 |
| MbiI | CCGCTC | 1 cut(s) | 265 |
| MboI | GATC | 1 cut(s) | 120 |
| MboII | GAAGA | 5 cut(s) | 44, 142, 254, 581, 620 |
| MluCI | AATT | 3 cut(s) | 331, 352, 472 |
| MlyI | GAGTC | 2 cut(s) | 90, 151 |
| MmeI | TCCRAC | 2 cut(s) | 306, 341 |
| MnlI | CCTC | 4 cut(s) | 73, 151, 172, 291 |
| Mph1103I | ATGCAT | 1 cut(s) | 283 |
| MseI | TTAA | 4 cut(s) | 84, 255, 504, 600 |
| MspA1I | CMGCKG | 2 cut(s) | 378, 581 |
| MspR9I | CCNGG | 1 cut(s) | 397 |
| MvaI | CCWGG | 1 cut(s) | 397 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 315, 442, 587 |
| NdeI | CATATG | 1 cut(s) | 277 |
| NdeII | GATC | 1 cut(s) | 120 |
| NlaIII | CATG | 2 cut(s) | 63, 173 |
| NmeAIII | GCCGAG | 1 cut(s) | 321 |
| NmuCI | GTSAC | 1 cut(s) | 414 |
| NsiI | ATGCAT | 1 cut(s) | 283 |
| PagI | TCATGA | 1 cut(s) | 169 |
| PasI | CCCWGGG | 1 cut(s) | 396 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 325 |
| PkrI | GCNGC | 3 cut(s) | 250, 388, 583 |
| PleI | GAGTC | 2 cut(s) | 90, 150 |
| PpsI | GAGTC | 2 cut(s) | 90, 150 |
| Psp6I | CCWGG | 1 cut(s) | 395 |
| PspGI | CCWGG | 1 cut(s) | 395 |
| PspPI | GGNCC | 2 cut(s) | 300, 373 |
| PstI | CTGCAG | 1 cut(s) | 311 |
| SaqAI | TTAA | 4 cut(s) | 84, 255, 504, 600 |
| SatI | GCNGC | 3 cut(s) | 249, 387, 582 |
| Sau3AI | GATC | 1 cut(s) | 120 |
| Sau96I | GGNCC | 2 cut(s) | 300, 373 |
| SchI | GAGTC | 2 cut(s) | 90, 151 |
| ScrFI | CCNGG | 1 cut(s) | 397 |
| SfcI | CTRYAG | 1 cut(s) | 307 |
| SinI | GGWCC | 1 cut(s) | 373 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| Sse9I | AATT | 3 cut(s) | 331, 352, 472 |
| SsiI | CCGC | 4 cut(s) | 182, 265, 376, 581 |
| SspMI | CTAG | 1 cut(s) | 420 |
| StyD4I | CCNGG | 1 cut(s) | 395 |
| StyI | CCWWGG | 1 cut(s) | 425 |
| TaaI | ACNGT | 1 cut(s) | 565 |
| TaiI | ACGT | 1 cut(s) | 262 |
| TaqI | TCGA | 1 cut(s) | 567 |
| TasI | AATT | 3 cut(s) | 331, 352, 472 |
| TauI | GCSGC | 1 cut(s) | 584 |
| Tru1I | TTAA | 4 cut(s) | 84, 255, 504, 600 |
| Tru9I | TTAA | 4 cut(s) | 84, 255, 504, 600 |
| TscAI | CASTG | 1 cut(s) | 299 |
| TseFI | GTSAC | 1 cut(s) | 414 |
| TseI | GCWGC | 2 cut(s) | 248, 386 |
| Tsp45I | GTSAC | 1 cut(s) | 414 |
| TspDTI | ATGAA | 5 cut(s) | 44, 48, 158, 228, 351 |
| TspGWI | ACGGA | 1 cut(s) | 133 |
| TspRI | CASTG | 1 cut(s) | 299 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 325 |
| VpaK11BI | GGWCC | 1 cut(s) | 373 |
| XapI | RAATTY | 1 cut(s) | 472 |
| XspI | CTAG | 1 cut(s) | 420 |
| Zsp2I | ATGCAT | 1 cut(s) | 283 |