pycom10g24100

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
25990322 .. 25994817
4496 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1524 bp
ATGGCTGGAGACAACGAAGCTGCAAGCACACTTGAAGCTACGCCAACATGGGCTGTAGCCACCGTTGTCTTTGTGTTGATAGTGGTCTCCACAATTATAGAGTATTTGCTTCATCTTTCACACAAGTATTTTCATAGGTTGAAAAGGAAGGCTCTCATTCAGGCTCTTGATAAGATCAAATCAGAATTGATGCTGCTAGGGTTCATATCGTTGCTACTAACCGTTGGTCAAAAGCCAATTGCAAATATCTGCATCTCTAAAAGCTTGGGTGATTCTTTTCTTCCTTGCAAGAGCTCCACCCACAGTGATGTCGAAGAGGAAACCAAATGCTCTAACCAAGGAAAAGTTTCTTTGATGTCCAGGGAGGGCGCGAATGAACTCCAATACTTAATTTTTGTGCTCGCTGCGTTCCACGTTTCGTCTTGTGTCCTCACCTTCGCTCTTGGTATGGCCAAGATGAAAAGGTGGGAGCTTTGGGAGGCAGAAACCAGAACATTGGAGTATCAATTTACTCACGATCCACGAAGGTTTCAGCTCGCACATCAAACATCATTTGGGAAGCGGCATTTGAGATGTTGGAGTGATCACGGATTCCTCCGTTGGCCGGTCAGCTTTCTGAGACAATTCTTTAATTCTGTATCAAGAGTGGATTACTTCACTCTCAGACATGGATTCATAACGGCACATTTTGCAGAAGGAAGCCGTTTTGACTTCCAGAAATATATAAGAAGAAATTTGGAGAAGGACTTTGGTGTGGTTATGGGATCAAGCTGGTGGATTTGGCTGTTCTCAGTATCTGTTGTCATATTCTTCACTGCAGATGGTTTTTACAATTATCTGTGGGTTCCCTTTATTCCGTTAGTGATGCTCTTGCTGGTGGGAACAAAGCTTCAGGAGATCATAACTAAAATGTGCCTAGACAGCCATGATAAATCTCATGTTGTTAGAGGAGCTTTGCTTGTGAAGCCCAGTGACCACTTTTTCTGGTTTAACTGGCCCCAGTTGCTTCTCCATCTTTTGCACTTCATTCTGTTTCAGAATTCCTTTCAGTTGGCATTCTTCACATGGACTTGGTACAAATTTGGGCTCACATCATGCTTCCACCATGAAACTGAGGATATTGTCATAAGGCTGGCCATGGGTGTAATGGTGCAAATCCTATGCGGCTATGTCACTCTGCCTCTCTATGCTTTGGTCACGCAGATGGGTACATCAATGAGAAAAGGCGTGTTTACTGCAAATGTGATGATAGGGCTGAATAAATGGAGAGCCAGGGCCAGGAAAAACCTAGCTCTTCGGAACCCGGCACGATTGTCGTTGGATGCTTCGCTTGAAACTTCACTATCAGTAAACACTTCACCTTCTTTCAGTGCTCATGAGGCTTCATTCTCCACCGTAGAATTTGGTCGTCCGTCCGACGATGCAGAATATGTAGCACTTGAAATACTGGAGGCCCAAAAAGCACAAGAAAAACAGGCAGCTGAGGGACAGCAAAGTAATGGTTCATTAGATCGATGGATCTGA

Protein Analysis

508

Amino Acids

58.11

Weight (kDa)

8.88

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 10 - 106 9.8e-37 Mlo family
Mlo PF03094 106 - 439 7.5e-144 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 371
AciI CCGC 2 cut(s) 562, 1164
AclWI GGATC 2 cut(s) 512, 772
AcoI YGGCCR 3 cut(s) 450, 602, 1134
AcsI RAATTY 4 cut(s) 733, 1039, 1079, 1400
AcuI CTGAAG 1 cut(s) 875
AfaI GTAC 2 cut(s) 1076, 1210
AfiI CCNNNNNNNGG 2 cut(s) 604, 1278
AgsI TTSAA 4 cut(s) 35, 142, 1334, 1442
AjnI CCWGG 3 cut(s) 359, 1271, 1277
Alw21I GWGCWC 3 cut(s) 296, 402, 1375
Alw26I GTCTC 3 cut(s) 3, 91, 613
AlwI GGATC 2 cut(s) 512, 772
AlwNI CAGNNNCTG 1 cut(s) 797
AoxI GGCC 6 cut(s) 450, 602, 995, 1134, 1275, 1452
ApeKI GCWGC 4 cut(s) 20, 193, 404, 1478
ApoI RAATTY 4 cut(s) 733, 1039, 1079, 1400
Asp700I GAANNNNTTC 1 cut(s) 346
AspLEI GCGC 1 cut(s) 371
AspS9I GGNCC 3 cut(s) 996, 1275, 1453
AsuC2I CCSGG 1 cut(s) 1304
AsuHPI GGTGA 3 cut(s) 281, 424, 1350
BalI TGGCCA 2 cut(s) 452, 1136
BanII GRGCYC 2 cut(s) 296, 1089
Bbv12I GWGCWC 3 cut(s) 296, 402, 1375
BbvCI CCTCAGC 1 cut(s) 1482
BbvI GCAGC 4 cut(s) 7, 180, 391, 1490
BccI CCATC 4 cut(s) 815, 1020, 1198, 1509
BceAI ACGGC 2 cut(s) 687, 696
BcgI CGANNNNNNTGC 2 cut(s) 1296, 1330
BciT130I CCWGG 3 cut(s) 361, 1273, 1279
BclI TGATCA 1 cut(s) 583
BcnI CCSGG 1 cut(s) 1304
BcoDI GTCTC 3 cut(s) 3, 91, 613
BfaI CTAG 3 cut(s) 197, 917, 1289
BfmI CTRYAG 2 cut(s) 54, 816
BisI GCNGC 6 cut(s) 21, 194, 405, 563, 1165, 1479
BlsI GCNGC 6 cut(s) 22, 195, 406, 564, 1166, 1480
Bme1390I CCNGG 4 cut(s) 361, 1273, 1279, 1304
BmgT120I GGNCC 3 cut(s) 996, 1275, 1453
BmiI GGNNCC 3 cut(s) 846, 998, 1301
BmrFI CCNGG 4 cut(s) 361, 1273, 1279, 1304
BmrI ACTGGG 2 cut(s) 963, 994
BmsI GCATC 5 cut(s) 180, 261, 855, 1312, 1411
BmuI ACTGGG 2 cut(s) 963, 994
BpmI CTGGAG 2 cut(s) 27, 1469
Bpu10I CCTNAGC 1 cut(s) 1482
BpuMI CCSGG 1 cut(s) 1304
Bsa29I ATCGAT 1 cut(s) 1513
BsaI GGTCTC 1 cut(s) 91
BsaJI CCNNGG 4 cut(s) 337, 360, 1137, 1272
Bsc4I CCNNNNNNNGG 2 cut(s) 604, 1278
Bse118I RCCGGY 1 cut(s) 604
Bse1I ACTGG 4 cut(s) 969, 998, 1000, 1452
BseBI CCWGG 3 cut(s) 361, 1273, 1279
BseCI ATCGAT 1 cut(s) 1513
BseDI CCNNGG 4 cut(s) 337, 360, 1137, 1272
BseGI GGATG 1 cut(s) 1327
BseLI CCNNNNNNNGG 2 cut(s) 604, 1278
BseMII CTCAG 5 cut(s) 608, 676, 804, 1104, 1473
BseNI ACTGG 4 cut(s) 969, 998, 1000, 1452
BseRI GAGGAG 1 cut(s) 963
BseXI GCAGC 4 cut(s) 7, 180, 391, 1490
Bsh1236I CGCG 1 cut(s) 371
BshFI GGCC 6 cut(s) 452, 604, 997, 1136, 1277, 1454
BshVI ATCGAT 1 cut(s) 1513
BsiHKAI GWGCWC 3 cut(s) 296, 402, 1375
BsiSI CCGG 2 cut(s) 605, 1304
BslFI GGGAC 1 cut(s) 1500
BslI CCNNNNNNNGG 2 cut(s) 604, 1278
BsmAI GTCTC 3 cut(s) 3, 91, 613
BsmFI GGGAC 1 cut(s) 1500
BsmI GAATGC 1 cut(s) 1055
BsnI GGCC 6 cut(s) 452, 604, 997, 1136, 1277, 1454
Bso31I GGTCTC 1 cut(s) 91
Bsp1286I GDGCHC 4 cut(s) 296, 402, 1089, 1375
Bsp143I GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
Bsp19I CCATGG 1 cut(s) 1137
BspACI CCGC 2 cut(s) 562, 1164
BspANI GGCC 6 cut(s) 452, 604, 997, 1136, 1277, 1454
BspCNI CTCAG 5 cut(s) 609, 675, 803, 1105, 1474
BspDI ATCGAT 1 cut(s) 1513
BspFNI CGCG 1 cut(s) 371
BspHI TCATGA 1 cut(s) 1375
BspLI GGNNCC 3 cut(s) 846, 998, 1301
BspMAI CTGCAG 1 cut(s) 820
BspPI GGATC 2 cut(s) 512, 772
BspQI GCTCTTC 1 cut(s) 1299
BspTNI GGTCTC 1 cut(s) 91
BsrFI RCCGGY 1 cut(s) 604
BsrI ACTGG 4 cut(s) 969, 998, 1000, 1452
BssAI RCCGGY 1 cut(s) 604
BssECI CCNNGG 4 cut(s) 337, 360, 1137, 1272
BssMI GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
BssT1I CCWWGG 2 cut(s) 337, 1137
Bst2UI CCWGG 3 cut(s) 361, 1273, 1279
Bst4CI ACNGT 4 cut(s) 64, 223, 305, 1396
Bst6I CTCTTC 2 cut(s) 309, 1299
BstAPI GCANNNNNTGC 1 cut(s) 689
BstC8I GCNNGC 4 cut(s) 25, 402, 537, 1134
BstDEI CTNAG 5 cut(s) 617, 662, 790, 1113, 1482
BstDSI CCRYGG 1 cut(s) 1137
BstF5I GGATG 1 cut(s) 1327
BstFNI CGCG 1 cut(s) 371
BstHHI GCGC 1 cut(s) 371
BstKTI GATC 7 cut(s) 177, 520, 586, 767, 900, 1513, 1521
BstMAI GTCTC 3 cut(s) 3, 91, 613
BstMBI GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
BstMWI GCNNNNNNNGC 6 cut(s) 689, 921, 964, 1003, 1379, 1460
BstNI CCWGG 3 cut(s) 361, 1273, 1279
BstSCI CCNGG 4 cut(s) 359, 1271, 1277, 1302
BstSFI CTRYAG 2 cut(s) 54, 816
BstUI CGCG 1 cut(s) 371
BstV1I GCAGC 4 cut(s) 7, 180, 391, 1490
BstX2I RGATCY 1 cut(s) 1518
BstXI CCANNNNNNTGG 1 cut(s) 496
BstYI RGATCY 1 cut(s) 1518
Bsu15I ATCGAT 1 cut(s) 1513
BsuRI GGCC 6 cut(s) 452, 604, 997, 1136, 1277, 1454
BsuTUI ATCGAT 1 cut(s) 1513
BtgI CCRYGG 1 cut(s) 1137
BtsCI GGATG 1 cut(s) 1327
BtsI GCAGTG 1 cut(s) 813
BtsIMutI CAGTG 4 cut(s) 310, 813, 976, 1375
Cac8I GCNNGC 4 cut(s) 25, 402, 537, 1134
CaiI CAGNNNCTG 1 cut(s) 797
CciI TCATGA 1 cut(s) 1375
CfoI GCGC 1 cut(s) 371
Cfr10I RCCGGY 1 cut(s) 604
Cfr13I GGNCC 3 cut(s) 996, 1275, 1453
ClaI ATCGAT 1 cut(s) 1513
Csp6I GTAC 2 cut(s) 1075, 1209
CviAII CATG 9 cut(s) 48, 668, 926, 938, 1065, 1095, 1106, 1138, 1376
CviQI GTAC 2 cut(s) 1075, 1209
DdeI CTNAG 5 cut(s) 617, 662, 790, 1113, 1482
DpnI GATC 7 cut(s) 176, 519, 585, 766, 899, 1512, 1520
DpnII GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
EaeI YGGCCR 3 cut(s) 450, 602, 1134
Eam1104I CTCTTC 2 cut(s) 309, 1299
EarI CTCTTC 2 cut(s) 309, 1299
Ecl136II GAGCTC 1 cut(s) 294
Eco130I CCWWGG 2 cut(s) 337, 1137
Eco24I GRGCYC 2 cut(s) 296, 1089
Eco31I GGTCTC 1 cut(s) 91
Eco53kI GAGCTC 1 cut(s) 294
Eco57I CTGAAG 1 cut(s) 875
EcoICRI GAGCTC 1 cut(s) 294
EcoRI GAATTC 1 cut(s) 1039
EcoRII CCWGG 3 cut(s) 359, 1271, 1277
EcoT14I CCWWGG 2 cut(s) 337, 1137
EcoT38I GRGCYC 2 cut(s) 296, 1089
ErhI CCWWGG 2 cut(s) 337, 1137
FaeI CATG 9 cut(s) 51, 671, 929, 941, 1068, 1098, 1109, 1141, 1379
FaqI GGGAC 1 cut(s) 1500
FatI CATG 9 cut(s) 47, 667, 925, 937, 1064, 1094, 1105, 1137, 1375
FbaI TGATCA 1 cut(s) 583
Fnu4HI GCNGC 6 cut(s) 21, 194, 405, 563, 1165, 1479
FokI GGATG 1 cut(s) 1334
FriOI GRGCYC 2 cut(s) 296, 1089
Fsp4HI GCNGC 6 cut(s) 21, 194, 405, 563, 1165, 1479
FspBI CTAG 3 cut(s) 197, 917, 1289
GlaI GCGC 1 cut(s) 370
GluI GCNGC 6 cut(s) 21, 194, 405, 563, 1165, 1479
GsuI CTGGAG 2 cut(s) 27, 1469
HaeIII GGCC 6 cut(s) 452, 604, 997, 1136, 1277, 1454
HapII CCGG 2 cut(s) 605, 1304
HhaI GCGC 1 cut(s) 371
Hin1II CATG 9 cut(s) 51, 671, 929, 941, 1068, 1098, 1109, 1141, 1379
Hin6I GCGC 1 cut(s) 369
HinP1I GCGC 1 cut(s) 369
HindIII AAGCTT 2 cut(s) 262, 887
HinfI GANTC 3 cut(s) 272, 591, 672
HpaII CCGG 2 cut(s) 605, 1304
HphI GGTGA 3 cut(s) 281, 424, 1350
Hpy166II GTNNAC 2 cut(s) 1233, 1351
Hpy188I TCNGA 7 cut(s) 184, 618, 665, 1038, 1299, 1417, 1523
Hpy188III TCNNGA 6 cut(s) 167, 515, 642, 715, 893, 1376
Hpy8I GTNNAC 2 cut(s) 1233, 1351
Hpy99I CGWCG 1 cut(s) 1421
HpyAV CCTTC 6 cut(s) 142, 445, 519, 689, 736, 1371
HpyCH4III ACNGT 4 cut(s) 64, 223, 305, 1396
HpyCH4IV ACGT 1 cut(s) 414
HpyF10VI GCNNNNNNNGC 6 cut(s) 689, 921, 964, 1003, 1379, 1460
HpyF3I CTNAG 5 cut(s) 617, 662, 790, 1113, 1482
HpySE526I ACGT 1 cut(s) 414
Hsp92II CATG 9 cut(s) 51, 671, 929, 941, 1068, 1098, 1109, 1141, 1379
HspAI GCGC 1 cut(s) 369
Ksp22I TGATCA 1 cut(s) 583
Kzo9I GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
LguI GCTCTTC 1 cut(s) 1299
LmnI GCTCC 3 cut(s) 299, 469, 950
Lsp1109I GCAGC 4 cut(s) 7, 180, 391, 1490
LweI GCATC 5 cut(s) 180, 261, 855, 1312, 1411
MaeI CTAG 3 cut(s) 197, 917, 1289
MaeII ACGT 1 cut(s) 414
MaeIII GTNAC 3 cut(s) 971, 1171, 1195
MalI GATC 7 cut(s) 176, 519, 585, 766, 899, 1512, 1520
MboI GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
MboII GAAGA 6 cut(s) 272, 326, 741, 802, 1051, 1286
MfeI CAATTG 1 cut(s) 237
MflI RGATCY 1 cut(s) 1518
MhlI GDGCHC 4 cut(s) 296, 402, 1089, 1375
MlsI TGGCCA 2 cut(s) 452, 1136
MluNI TGGCCA 2 cut(s) 452, 1136
MmeI TCCRAC 3 cut(s) 557, 1299, 1440
Mox20I TGGCCA 2 cut(s) 452, 1136
MroXI GAANNNNTTC 1 cut(s) 346
MscI TGGCCA 2 cut(s) 452, 1136
MseI TTAA 3 cut(s) 389, 630, 990
MslI CAYNNNNRTG 2 cut(s) 306, 1202
Msp20I TGGCCA 2 cut(s) 452, 1136
MspA1I CMGCKG 1 cut(s) 1481
MspI CCGG 2 cut(s) 605, 1304
MspR9I CCNGG 4 cut(s) 361, 1273, 1279, 1304
MunI CAATTG 1 cut(s) 237
Mva1269I GAATGC 1 cut(s) 1055
MvaI CCWGG 3 cut(s) 361, 1273, 1279
MvnI CGCG 1 cut(s) 371
MwoI GCNNNNNNNGC 6 cut(s) 689, 921, 964, 1003, 1379, 1460
NciI CCSGG 1 cut(s) 1304
NcoI CCATGG 1 cut(s) 1137
NdeII GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
NlaIII CATG 9 cut(s) 51, 671, 929, 941, 1068, 1098, 1109, 1141, 1379
NlaIV GGNNCC 3 cut(s) 846, 998, 1301
NmuCI GTSAC 3 cut(s) 971, 1171, 1195
PagI TCATGA 1 cut(s) 1375
PciSI GCTCTTC 1 cut(s) 1299
PctI GAATGC 1 cut(s) 1055
PdmI GAANNNNTTC 1 cut(s) 346
PfeI GAWTC 3 cut(s) 272, 591, 672
PkrI GCNGC 6 cut(s) 22, 195, 406, 564, 1166, 1480
Psp124BI GAGCTC 1 cut(s) 296
Psp6I CCWGG 3 cut(s) 359, 1271, 1277
PspGI CCWGG 3 cut(s) 359, 1271, 1277
PspN4I GGNNCC 3 cut(s) 846, 998, 1301
PspPI GGNCC 3 cut(s) 996, 1275, 1453
PstI CTGCAG 1 cut(s) 820
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 1 cut(s) 1518
PvuII CAGCTG 1 cut(s) 1481
RsaI GTAC 2 cut(s) 1076, 1210
RsaNI GTAC 2 cut(s) 1075, 1209
RseI CAYNNNNRTG 2 cut(s) 306, 1202
SacI GAGCTC 1 cut(s) 296
SapI GCTCTTC 1 cut(s) 1299
SaqAI TTAA 3 cut(s) 389, 630, 990
SatI GCNGC 6 cut(s) 21, 194, 405, 563, 1165, 1479
Sau3AI GATC 7 cut(s) 174, 517, 583, 764, 897, 1510, 1518
Sau96I GGNCC 3 cut(s) 996, 1275, 1453
ScrFI CCNGG 4 cut(s) 361, 1273, 1279, 1304
SduI GDGCHC 4 cut(s) 296, 402, 1089, 1375
SfaNI GCATC 5 cut(s) 180, 261, 855, 1312, 1411
SfcI CTRYAG 2 cut(s) 54, 816
SmiMI CAYNNNNRTG 2 cut(s) 306, 1202
SsiI CCGC 2 cut(s) 562, 1164
SspMI CTAG 3 cut(s) 197, 917, 1289
SstI GAGCTC 1 cut(s) 296
StyD4I CCNGG 4 cut(s) 359, 1271, 1277, 1302
StyI CCWWGG 2 cut(s) 337, 1137
TaaI ACNGT 4 cut(s) 64, 223, 305, 1396
TaiI ACGT 1 cut(s) 417
TaqI TCGA 2 cut(s) 312, 1513
TauI GCSGC 2 cut(s) 565, 1167
TfiI GAWTC 3 cut(s) 272, 591, 672
Tru1I TTAA 3 cut(s) 389, 630, 990
Tru9I TTAA 3 cut(s) 389, 630, 990
TscAI CASTG 4 cut(s) 310, 820, 976, 1375
TseFI GTSAC 3 cut(s) 971, 1171, 1195
TseI GCWGC 4 cut(s) 20, 193, 404, 1478
Tsp45I GTSAC 3 cut(s) 971, 1171, 1195
TspGWI ACGGA 4 cut(s) 587, 603, 846, 1401
TspRI CASTG 4 cut(s) 310, 820, 976, 1375
XapI RAATTY 4 cut(s) 733, 1039, 1079, 1400
XcmI CCANNNNNNNNNTGG 1 cut(s) 1144
XmnI GAANNNNTTC 1 cut(s) 346
XspI CTAG 3 cut(s) 197, 917, 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.