RLG00000031656

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
7135900 .. 7139385
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031656

Sequence Viewer

Length: 1485 bp
ATGGCCGGAGAGGAAGTCAGTAGTGAAAGCACCACACTAGAATCAACACCAACATGGGCTGTCGCCACCGTCTGCTTCGTTTTGATTTTCATCTCCATTCTCATCGAGCATTTGCTTCATCTTTTAGCCCATTATTTCAACAAGATAAGGAGGAAGTCTCTCATTCTCGCTCTTGATAAGATCAAATCAGAGTTGATGTTGCTGGGGTTCATTTCTTTGCTGCTAACCGTGGGGCAAAAGCCGATTGCCAATATCTGCATCCCGAAATCTGCCGGAGAGTCTTTTCTTCCTTGCCAGAGCTACACCTTGAGTGAAGATATTGTGGAGGAAACGAAATGTGCAGAGCAGGGAAAGGTTTCATTGATGTCGAGGTCCGGTGCCAATGAGCTTCAATACTTTATTTTTGTGCTCGCACTGTTCCACGTCTTGTCTTGCGTTCTCACTTCCACTCTTGGTTTTGCCAAGATGAAGAGCTGGCAGTCTTGGGAGGCAGAAACCAGAACCATGGAGTATCAATTTTCTTATGATCCAAGGAGATTTCAGCTGGCACACCAAACCTCATTTGGGAAGAGACATTTGAAATGTTGGAGTGACCACAGAATACTCCGTTGGCCGGCCTGTTTTGCAAGGCAATTCTTCAGTTCTGTTTCCAAAGTGGATTATTTCACTCTTCGACACGGATTCATAACATTAATAAATGTAAGTCTGACTTGGATAGCTAACACAATAATTCACTGTGTCTCTGCAGGATTTTATAATTATCTATGGGTACCGTCCATTCCTTTAGTGATGCTATTGCTTGTGGGAACAAAGCTACAAGGCATCATAACTAAGATGTGTGTAGATAGCCATGATAAATCCCATGTTGTAAGAGGGACTTTGCTTGTGAAGCCCAGTGACCACTTTTTCTGGTTTGGCTGGCCCAAATTGCTTCTCCATATTTTGCACTTCACACTGTATCAGAACTCATTTCAATTGGCATTCTTCACTTGGACTTGGTACAAATTTGGTTTGAAATCATGCTTCCACCGAGAAACTGAGGATATAGTAATACGGCTGGCCATGGGCATCATGGTACAAATCCTGTGTGGCTATGTAACTCTACCTCTTTACGCATTGGTCACTCAGATGGGTACGTCGATGAGAAAAGCTGTCTTCACCGAGACAGTGGTTACCGGACTGAAAAAATGGAGAGGAAGAGCCAGGAAGAACCTTGCTCTTAAGAGCTCGGCACTAATGTCTTTGGATGCTTCCCTTCAAACCTCACTCTCTCTAGACACTACACTTTCTTTCAATCACATTGATGCTTCGGCTTCTTTCTCCACCGTGGATTTCGACGCTGAATATGTAGCAGTAGAAATAATGGTCAATGCTGGAAATGTTGTACAGGGAAAACAAGTACCGGAGGCGGAGTATCGAGACCAGAAGCCTGGACCATCATTTGATGGTTTTGATTTGAGTAGTAGTAAAAAATCTCAAAGATGA

Protein Analysis

495

Amino Acids

56.05

Weight (kDa)

8.97

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 11 - 102 1.1e-37 Mlo family
Mlo PF03094 109 - 231 5.6e-49 Mlo family
Mlo PF03094 237 - 413 3.2e-70 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 756
Acc65I GGTACC 1 cut(s) 769
AccB1I GGYRCC 2 cut(s) 377, 769
AciI CCGC 1 cut(s) 1409
AclWI GGATC 1 cut(s) 521
AcoI YGGCCR 3 cut(s) 3, 611, 1059
AcsI RAATTY 1 cut(s) 1004
AcuI CTGAAG 1 cut(s) 622
AfaI GTAC 6 cut(s) 771, 1001, 1077, 1135, 1386, 1401
AfiI CCNNNNNNNGG 2 cut(s) 564, 613
AflII CTTAAG 1 cut(s) 1220
AgsI TTSAA 7 cut(s) 139, 392, 580, 974, 1015, 1259, 1294
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 2 cut(s) 1202, 1429
AjuI GAANNNNNNNTTGG 2 cut(s) 592, 624
AluBI AGCT 8 cut(s) 300, 388, 474, 544, 719, 814, 1151, 1227
AluI AGCT 8 cut(s) 300, 388, 474, 544, 719, 814, 1151, 1227
Alw21I GWGCWC 2 cut(s) 411, 1229
Alw26I GTCTC 5 cut(s) 162, 565, 745, 1157, 1413
AlwI GGATC 1 cut(s) 521
AoxI GGCC 5 cut(s) 3, 611, 615, 920, 1059
ApeKI GCWGC 1 cut(s) 220
ApoI RAATTY 1 cut(s) 1004
AseI ATTAAT 1 cut(s) 692
Asp700I GAANNNNTTC 1 cut(s) 355
Asp718I GGTACC 1 cut(s) 769
AspS9I GGNCC 3 cut(s) 372, 921, 1433
AsuHPI GGTGA 1 cut(s) 1150
AvaII GGWCC 2 cut(s) 372, 1433
BalI TGGCCA 1 cut(s) 1061
BanI GGYRCC 2 cut(s) 377, 769
BanII GRGCYC 1 cut(s) 1229
BbsI GAAGAC 1 cut(s) 1147
Bbv12I GWGCWC 2 cut(s) 411, 1229
BbvI GCAGC 1 cut(s) 207
BccI CCATC 3 cut(s) 1123, 1439, 1444
BceAI ACGGC 1 cut(s) 1070
BciT130I CCWGG 2 cut(s) 1204, 1431
BcoDI GTCTC 5 cut(s) 162, 565, 745, 1157, 1413
BfaI CTAG 2 cut(s) 38, 1274
BfmI CTRYAG 1 cut(s) 744
BfrI CTTAAG 1 cut(s) 1220
BisI GCNGC 1 cut(s) 221
BlsI GCNGC 1 cut(s) 222
Bme1390I CCNGG 2 cut(s) 1204, 1431
Bme18I GGWCC 2 cut(s) 372, 1433
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 3 cut(s) 372, 921, 1433
BmiI GGNNCC 2 cut(s) 379, 771
BmrFI CCNGG 2 cut(s) 1204, 1431
BmrI ACTGGG 1 cut(s) 888
BmsI GCATC 6 cut(s) 267, 780, 831, 1077, 1237, 1294
BmuI ACTGGG 1 cut(s) 888
BpiI GAAGAC 1 cut(s) 1147
BplI GAGNNNNNCTC 2 cut(s) 142, 174
BpuEI CTTGAG 1 cut(s) 328
BsaBI GATNNNNATC 1 cut(s) 89
BsaI GGTCTC 1 cut(s) 1413
BsaJI CCNNGG 5 cut(s) 228, 504, 530, 1062, 1326
BsaWI WCCGGW 3 cut(s) 374, 1175, 1402
BsaXI ACNNNNNCTCC 3 cut(s) 30, 1397, 1427
Bsc4I CCNNNNNNNGG 2 cut(s) 564, 613
Bse118I RCCGGY 1 cut(s) 613
Bse1I ACTGG 1 cut(s) 894
Bse8I GATNNNNATC 1 cut(s) 89
BseBI CCWGG 2 cut(s) 1204, 1431
BseDI CCNNGG 5 cut(s) 228, 504, 530, 1062, 1326
BseGI GGATG 2 cut(s) 258, 1252
BseJI GATNNNNATC 1 cut(s) 89
BseLI CCNNNNNNNGG 2 cut(s) 564, 613
BseMII CTCAG 2 cut(s) 1029, 1139
BseNI ACTGG 1 cut(s) 894
BseXI GCAGC 1 cut(s) 207
BseYI CCCAGC 1 cut(s) 202
BsgI GTGCAG 1 cut(s) 360
BshFI GGCC 5 cut(s) 5, 613, 617, 922, 1061
BshNI GGYRCC 2 cut(s) 377, 769
BsiHKAI GWGCWC 2 cut(s) 411, 1229
BsiSI CCGG 6 cut(s) 6, 273, 375, 614, 1176, 1403
BslFI GGGAC 1 cut(s) 889
BslI CCNNNNNNNGG 2 cut(s) 564, 613
BsmAI GTCTC 5 cut(s) 162, 565, 745, 1157, 1413
BsmFI GGGAC 1 cut(s) 889
BsmI GAATGC 1 cut(s) 980
BsnI GGCC 5 cut(s) 5, 613, 617, 922, 1061
Bso31I GGTCTC 1 cut(s) 1413
Bsp1286I GDGCHC 2 cut(s) 411, 1229
Bsp1407I TGTACA 1 cut(s) 1384
Bsp143I GATC 2 cut(s) 180, 526
Bsp19I CCATGG 2 cut(s) 504, 1062
BspACI CCGC 1 cut(s) 1409
BspANI GGCC 5 cut(s) 5, 613, 617, 922, 1061
BspCNI CTCAG 2 cut(s) 1030, 1138
BspLI GGNNCC 2 cut(s) 379, 771
BspMAI CTGCAG 1 cut(s) 748
BspPI GGATC 1 cut(s) 521
BspQI GCTCTTC 2 cut(s) 464, 1192
BspT107I GGYRCC 2 cut(s) 377, 769
BspTI CTTAAG 1 cut(s) 1220
BspTNI GGTCTC 1 cut(s) 1413
BsrFI RCCGGY 1 cut(s) 613
BsrGI TGTACA 1 cut(s) 1384
BsrI ACTGG 1 cut(s) 894
BssAI RCCGGY 1 cut(s) 613
BssECI CCNNGG 5 cut(s) 228, 504, 530, 1062, 1326
BssMI GATC 2 cut(s) 180, 526
BssT1I CCWWGG 3 cut(s) 504, 530, 1062
Bst2UI CCWGG 2 cut(s) 1204, 1431
Bst4CI ACNGT 8 cut(s) 70, 229, 417, 737, 774, 957, 1168, 1327
Bst6I CTCTTC 4 cut(s) 464, 563, 675, 1192
BstAFI CTTAAG 1 cut(s) 1220
BstAUI TGTACA 1 cut(s) 1384
BstC8I GCNNGC 6 cut(s) 411, 476, 546, 615, 920, 1059
BstDEI CTNAG 3 cut(s) 831, 1038, 1125
BstDSI CCRYGG 4 cut(s) 228, 504, 1062, 1326
BstEII GGTNACC 1 cut(s) 1171
BstF5I GGATG 2 cut(s) 258, 1252
BstKTI GATC 2 cut(s) 183, 529
BstMAI GTCTC 5 cut(s) 162, 565, 745, 1157, 1413
BstMBI GATC 2 cut(s) 180, 526
BstMWI GCNNNNNNNGC 3 cut(s) 623, 889, 928
BstNI CCWGG 2 cut(s) 1204, 1431
BstPI GGTNACC 1 cut(s) 1171
BstSCI CCNGG 2 cut(s) 1202, 1429
BstSFI CTRYAG 1 cut(s) 744
BstV1I GCAGC 1 cut(s) 207
BstV2I GAAGAC 1 cut(s) 1147
BstXI CCANNNNNNTGG 2 cut(s) 505, 1430
BsuRI GGCC 5 cut(s) 5, 613, 617, 922, 1061
BtgI CCRYGG 4 cut(s) 228, 504, 1062, 1326
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 2 cut(s) 258, 1252
BtsIMutI CAGTG 5 cut(s) 413, 733, 901, 953, 1173
Cac8I GCNNGC 6 cut(s) 411, 476, 546, 615, 920, 1059
Cfr10I RCCGGY 1 cut(s) 613
Cfr13I GGNCC 3 cut(s) 372, 921, 1433
CseI GACGC 1 cut(s) 1346
Csp6I GTAC 6 cut(s) 770, 1000, 1076, 1134, 1385, 1400
CviAII CATG 7 cut(s) 54, 505, 851, 863, 1020, 1063, 1072
CviQI GTAC 6 cut(s) 770, 1000, 1076, 1134, 1385, 1400
DdeI CTNAG 3 cut(s) 831, 1038, 1125
DpnI GATC 2 cut(s) 182, 528
DpnII GATC 2 cut(s) 180, 526
EaeI YGGCCR 3 cut(s) 3, 611, 1059
Eam1104I CTCTTC 4 cut(s) 464, 563, 675, 1192
EarI CTCTTC 4 cut(s) 464, 563, 675, 1192
EciI GGCGGA 1 cut(s) 1424
Ecl136II GAGCTC 1 cut(s) 1227
Eco130I CCWWGG 3 cut(s) 504, 530, 1062
Eco24I GRGCYC 1 cut(s) 1229
Eco31I GGTCTC 1 cut(s) 1413
Eco47I GGWCC 2 cut(s) 372, 1433
Eco53kI GAGCTC 1 cut(s) 1227
Eco57I CTGAAG 1 cut(s) 622
Eco91I GGTNACC 1 cut(s) 1171
EcoICRI GAGCTC 1 cut(s) 1227
EcoO65I GGTNACC 1 cut(s) 1171
EcoRII CCWGG 2 cut(s) 1202, 1429
EcoT14I CCWWGG 3 cut(s) 504, 530, 1062
EcoT38I GRGCYC 1 cut(s) 1229
ErhI CCWWGG 3 cut(s) 504, 530, 1062
FaeI CATG 7 cut(s) 57, 508, 854, 866, 1023, 1066, 1075
FalI AAGNNNNNCTT 4 cut(s) 694, 726, 862, 894
FaqI GGGAC 1 cut(s) 889
FatI CATG 7 cut(s) 53, 504, 850, 862, 1019, 1062, 1071
Fnu4HI GCNGC 1 cut(s) 221
FokI GGATG 2 cut(s) 245, 1259
FriOI GRGCYC 1 cut(s) 1229
FseI GGCCGGCC 1 cut(s) 617
Fsp4HI GCNGC 1 cut(s) 221
FspBI CTAG 2 cut(s) 38, 1274
GluI GCNGC 1 cut(s) 221
GsaI CCCAGC 1 cut(s) 206
HaeIII GGCC 5 cut(s) 5, 613, 617, 922, 1061
HapII CCGG 6 cut(s) 6, 273, 375, 614, 1176, 1403
HgaI GACGC 1 cut(s) 1346
Hin1II CATG 7 cut(s) 57, 508, 854, 866, 1023, 1066, 1075
HinfI GANTC 3 cut(s) 41, 278, 681
HpaII CCGG 6 cut(s) 6, 273, 375, 614, 1176, 1403
HphI GGTGA 1 cut(s) 1150
Hpy188I TCNGA 4 cut(s) 190, 708, 963, 1128
Hpy188III TCNNGA 4 cut(s) 173, 262, 1274, 1418
Hpy99I CGWCG 2 cut(s) 1141, 1340
HpyAV CCTTC 1 cut(s) 1265
HpyCH4III ACNGT 8 cut(s) 70, 229, 417, 737, 774, 957, 1168, 1327
HpyCH4IV ACGT 2 cut(s) 423, 1136
HpyCH4V TGCA 5 cut(s) 258, 341, 626, 746, 946
HpyF10VI GCNNNNNNNGC 3 cut(s) 623, 889, 928
HpyF3I CTNAG 3 cut(s) 831, 1038, 1125
HpySE526I ACGT 2 cut(s) 423, 1136
Hsp92II CATG 7 cut(s) 57, 508, 854, 866, 1023, 1066, 1075
KpnI GGTACC 1 cut(s) 773
KroI GCCGGC 1 cut(s) 613
KroNI GCCGGC 1 cut(s) 615
Kzo9I GATC 2 cut(s) 180, 526
LguI GCTCTTC 2 cut(s) 464, 1192
Lsp1109I GCAGC 1 cut(s) 207
LweI GCATC 6 cut(s) 267, 780, 831, 1077, 1237, 1294
MaeI CTAG 2 cut(s) 38, 1274
MaeII ACGT 2 cut(s) 423, 1136
MaeIII GTNAC 5 cut(s) 590, 896, 1096, 1120, 1171
MalI GATC 2 cut(s) 182, 528
MboI GATC 2 cut(s) 180, 526
MfeI CAATTG 1 cut(s) 974
MhlI GDGCHC 2 cut(s) 411, 1229
MlsI TGGCCA 1 cut(s) 1061
MluCI AATT 7 cut(s) 515, 632, 729, 757, 926, 974, 1004
MluNI TGGCCA 1 cut(s) 1061
MlyI GAGTC 1 cut(s) 287
MmeI TCCRAC 1 cut(s) 566
Mox20I TGGCCA 1 cut(s) 1061
MroNI GCCGGC 1 cut(s) 613
MroXI GAANNNNTTC 1 cut(s) 355
MscI TGGCCA 1 cut(s) 1061
MseI TTAA 2 cut(s) 692, 1221
MslI CAYNNNNRTG 3 cut(s) 52, 1127, 1302
Msp20I TGGCCA 1 cut(s) 1061
MspA1I CMGCKG 1 cut(s) 544
MspCI CTTAAG 1 cut(s) 1220
MspI CCGG 6 cut(s) 6, 273, 375, 614, 1176, 1403
MspR9I CCNGG 2 cut(s) 1204, 1431
MunI CAATTG 1 cut(s) 974
Mva1269I GAATGC 1 cut(s) 980
MvaI CCWGG 2 cut(s) 1204, 1431
MwoI GCNNNNNNNGC 3 cut(s) 623, 889, 928
NaeI GCCGGC 1 cut(s) 615
NcoI CCATGG 2 cut(s) 504, 1062
NdeII GATC 2 cut(s) 180, 526
NgoMIV GCCGGC 1 cut(s) 613
NlaIII CATG 7 cut(s) 57, 508, 854, 866, 1023, 1066, 1075
NlaIV GGNNCC 2 cut(s) 379, 771
NmeAIII GCCGAG 1 cut(s) 1208
NmuCI GTSAC 3 cut(s) 590, 896, 1120
PciSI GCTCTTC 2 cut(s) 464, 1192
PctI GAATGC 1 cut(s) 980
PdiI GCCGGC 1 cut(s) 615
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 2 cut(s) 41, 681
PkrI GCNGC 1 cut(s) 222
PleI GAGTC 1 cut(s) 286
PpsI GAGTC 1 cut(s) 286
PshBI ATTAAT 1 cut(s) 692
PsiI TTATAA 1 cut(s) 756
Psp124BI GAGCTC 1 cut(s) 1229
Psp6I CCWGG 2 cut(s) 1202, 1429
PspEI GGTNACC 1 cut(s) 1171
PspFI CCCAGC 1 cut(s) 202
PspGI CCWGG 2 cut(s) 1202, 1429
PspN4I GGNNCC 2 cut(s) 379, 771
PspPI GGNCC 3 cut(s) 372, 921, 1433
PstI CTGCAG 1 cut(s) 748
PvuII CAGCTG 1 cut(s) 544
RigI GGCCGGCC 1 cut(s) 617
RsaI GTAC 6 cut(s) 771, 1001, 1077, 1135, 1386, 1401
RsaNI GTAC 6 cut(s) 770, 1000, 1076, 1134, 1385, 1400
RseI CAYNNNNRTG 3 cut(s) 52, 1127, 1302
SacI GAGCTC 1 cut(s) 1229
SapI GCTCTTC 2 cut(s) 464, 1192
SaqAI TTAA 2 cut(s) 692, 1221
SatI GCNGC 1 cut(s) 221
Sau3AI GATC 2 cut(s) 180, 526
Sau96I GGNCC 3 cut(s) 372, 921, 1433
SchI GAGTC 1 cut(s) 287
ScrFI CCNGG 2 cut(s) 1204, 1431
SduI GDGCHC 2 cut(s) 411, 1229
SfaNI GCATC 6 cut(s) 267, 780, 831, 1077, 1237, 1294
SfcI CTRYAG 1 cut(s) 744
SinI GGWCC 2 cut(s) 372, 1433
SmiMI CAYNNNNRTG 3 cut(s) 52, 1127, 1302
SmlI CTYRAG 2 cut(s) 307, 1220
SmoI CTYRAG 2 cut(s) 307, 1220
Sse9I AATT 7 cut(s) 515, 632, 729, 757, 926, 974, 1004
SsiI CCGC 1 cut(s) 1409
SspMI CTAG 2 cut(s) 38, 1274
SstI GAGCTC 1 cut(s) 1229
StyD4I CCNGG 2 cut(s) 1202, 1429
StyI CCWWGG 3 cut(s) 504, 530, 1062
TaaI ACNGT 8 cut(s) 70, 229, 417, 737, 774, 957, 1168, 1327
TaiI ACGT 2 cut(s) 426, 1139
TaqI TCGA 6 cut(s) 105, 368, 673, 1139, 1335, 1417
TasI AATT 7 cut(s) 515, 632, 729, 757, 926, 974, 1004
TatI WGTACW 1 cut(s) 1384
TfiI GAWTC 2 cut(s) 41, 681
Tru1I TTAA 2 cut(s) 692, 1221
Tru9I TTAA 2 cut(s) 692, 1221
TscAI CASTG 5 cut(s) 420, 740, 901, 960, 1173
TseFI GTSAC 3 cut(s) 590, 896, 1120
TseI GCWGC 1 cut(s) 220
Tsp45I GTSAC 3 cut(s) 590, 896, 1120
TspDTI ATGAA 6 cut(s) 79, 107, 199, 348, 482, 673
TspGWI ACGGA 2 cut(s) 596, 693
TspRI CASTG 5 cut(s) 420, 740, 901, 960, 1173
Vha464I CTTAAG 1 cut(s) 1220
VpaK11BI GGWCC 2 cut(s) 372, 1433
VspI ATTAAT 1 cut(s) 692
XapI RAATTY 1 cut(s) 1004
XbaI TCTAGA 1 cut(s) 1273
XcmI CCANNNNNNNNNTGG 2 cut(s) 560, 1069
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 2 cut(s) 38, 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.