Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0004050

Physical Location & Seq

Genomic Coordinates Forward (+)

27982072 .. 27984171

Gene Structure 2100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGACAAGGTCTTGGTGGATTGCCGCACTCATGTTTGCCCTTGGATTTTCTTTGGCCATAGCCCAAGATTATGGCGATGATCAGCAACAGCAACCTGCTGCACCACCCCCATCACAAGAAGATTGTGACGGGATTTACCTAAGCTATAACTTCCTTTCCCGGCGAAGAATCTACCCTTTCCTCAAGAATGCTGAGAAACAAGCATGGGCCTTCAATGCGACTGCAACCATAGTCAACACGGGAACGTACGAACTCAAAGCCTGGAAGATGTACATTGGGTTTCAACACAAGGAGATTCTAGTTGGTGCAGGTGGTGCCGTTTTGATGGACGGTGATGATTTCCCGGCTGATGTTGGAAATGGGACTACCCTCTCTGGAGCAGGACAGGCAGATTTGAAAACCGCCATTGGCACTGGTGGAGATTACACCAAAATTCAAGCCAAAATTCAAATCAGTGGCACTATGTTTGGTGTCAAGCCCCCAGGGAACCCAATGCCTAAAACAATTCGACTTGTTAACGATGGATACAAGTGCCCTGCACCAACCAATCGTAAAACGACAATGTACGTTTGTTGCGTTAGGAATCCTAAATATAAGTCCATTGTTACGAAAACCAAGTTCTTGCCTCGACAAAAGGGTGATCTCACAATTGCATATGATGTCATTCAAGCCTATGAGAATAATTATCTTGCTCAGGTGACAATGGAGAACAAGAGCCCTTTGGGACGTTTGGACCATTGGAACTTAACTTGGGAATGGATGAGAGGGGAATTTATATACTCCATGAAAGGTGCTTATCCGCGTTCGATTGACTATTTGAATTGCATATATGGTGCTCCCGGACAATACTATCAACAGATGGATTTCTCCAAGGTCTTGAATTGCAAAAAAAATCCAGTTATCGGAGACCTACCTCGAGAGAAAGCAAACGATACTCAAGTTGGGAAAATACCTAATTGCTGCAGAAATGGTAGTATTTTGCCTGCTATAATGGATCAAAGCAAAACCAAGGCTGCTTTTCAAATGCAGGTGTTCAAAGTACCTCCTGATTTGAATCGAACGGCTCTGTATCCTCCTGAAAAATTCAAAGTGGAGGGGGTGCTTAATCCGGAATACAAATGTGGGCAGCCTATTAGGGTGGACCCTGCTCAGTTTCCAGACCCAAGTGGGATTCAGGCTACAATCTTAGCTATTGCAAGCTGGCAAATAATTTGCAACATCACAAGAGCCAAAACTAGGAAACCCAAGTGTTGTGTTTCATTCTCTGCTTATTACAATGAGTCTGTGATACCCTGCAGAACATGTGCTTGTGGTTGTACCGACACGAAAAAATGCAACCCGAAAGCCCCTGCCATTCTTCTCCCTCCAGAAACTCTTCTCGTCCCATTCGAAAATAGGACGAAGAAGGCCATAGCTTGGGCAAGCATAAAGCACCATCACGTGCCCAAGCCACTGCCTTGTGGGAACAATTGTCCGGTTAGTGTAAATTGGCATGTCTTATCAGATTACAAGGATGGATGGACAGCTAGAATGACACTATTCAATTGGGCTAACATGAATTTTGAAGATTGGTTTGCTGCGGTGCAACTCAAGAAAGCTTCTCCCGGTTACGAAAATGCATATTCTTTCAATGGGACCAAACTTCCGACGTTGGAGGACATCATCTTCCTCCAAGGCTTAAAGGGCTTGACTTTTTTGGTGGCGGAGACAAATGGATCGAACCCGAAAGCTCCTAGGGTGCCTGGAAAGCAACAATCTGTTATTTCTTTTAAGAAGAAGCGGACACCAGACATAGAAGTAGCTAAACGTGATGGGTTTCCTTCAAGAGTGTTTTTCAATGGGGAAGAATGTTCACTTCCTACTCAACTTCCACTATCACATGGAAGTTTGCATCATGGAAATTTGGTAGTTGTGATATTCCTTTCAATTTTGACTTTTCTTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

649

Amino Acids

72.25

Weight (kDa)

9.17

Isoelectric Point (pI)

31.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	229 - 408	1.3e-63	COBRA-like protein
COB_C	PF25079	416 - 624	1.3e-99	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20580 AT4G27110
fragaria_vesca	FvH4_3g02530 FvH4_3g21960 FvH4_3g21960
malus_domestica	MD03G1209900.v1.1 MD10G1315500.v1.1 MD11G1224600.v1.1
prunus_persica	Prupe.4G025000_v2.0.a1 Prupe.4G205300_v2.0.a1 Prupe.4G205300_v2.0.a1
pyrus_communis	pycom10g26780
rosa_chinensis	RchiOBHm_Chr5g0003851 RchiOBHm_Chr5g0037811
rosa_laevigata	RLG00000031181 RLG00000033811
rosa_multiflora	Rmu_sc0005416.1_g000009 Rmu_sc0006558.1_g000051
rosa_roxburghii	Rroxscaffold_1G00043110
rosa_rugosa	Rorug04G0407500 Rorug05G0167700 Rorug05G0167700 Rorug05G0167800
rosa_samantha	Rh5AG034700 Rh5AG256600 Rh5BG033100 Rh5BG259000 Rh5CG037100 Rh5CG292000 Rh5DG033400 Rh5DG268900
rosa_wichuraiana	Rw5G003180 Rw5G023790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	299, 1018
Acc36I	ACCTGC	3 cut(s)	103, 299, 1018
AccB1I	GGYRCC	2 cut(s)	314, 1738
AccB7I	CCANNNNNTGG	1 cut(s)	1416
AccII	CGCG	1 cut(s)	802
AccIII	TCCGGA	1 cut(s)	1108
AciI	CCGC	6 cut(s)	24, 402, 800, 1580, 1703, 1780
AclWI	GGATC	2 cut(s)	1002, 1723
AcoI	YGGCCR	1 cut(s)	54
AcsI	RAATTY	6 cut(s)	432, 444, 770, 1082, 1558, 1900
AcvI	CACGTG	1 cut(s)	1441
AfaI	GTAC	5 cut(s)	248, 272, 566, 1041, 1318
AfiI	CCNNNNNNNGG	3 cut(s)	902, 1236, 1416
AflIII	ACRYGT	1 cut(s)	1301
AjnI	CCWGG	3 cut(s)	260, 481, 1741
AluBI	AGCT	8 cut(s)	144, 1190, 1200, 1415, 1526, 1598, 1730, 1802
AluI	AGCT	8 cut(s)	144, 1190, 1200, 1415, 1526, 1598, 1730, 1802
Alw21I	GWGCWC	1 cut(s)	838
Alw26I	GTCTC	2 cut(s)	900, 1700
AlwI	GGATC	2 cut(s)	1002, 1723
Ama87I	CYCGRG	1 cut(s)	915
Aor13HI	TCCGGA	1 cut(s)	1108
AoxI	GGCC	3 cut(s)	54, 207, 1407
ApeKI	GCWGC	5 cut(s)	98, 960, 1013, 1126, 1577
ApoI	RAATTY	6 cut(s)	432, 444, 770, 1082, 1558, 1900
Asp700I	GAANNNNTTC	1 cut(s)	1374
AspA2I	CCTAGG	1 cut(s)	1733
AspS9I	GGNCC	4 cut(s)	207, 733, 1141, 1635
AsuC2I	CCSGG	4 cut(s)	160, 344, 840, 1605
AsuHPI	GGTGA	3 cut(s)	344, 650, 709
AsuII	TTCGAA	1 cut(s)	1389
AvaI	CYCGRG	1 cut(s)	915
AvaII	GGWCC	3 cut(s)	733, 1141, 1635
AvrII	CCTAGG	1 cut(s)	1733
BaeGI	GKGCMC	2 cut(s)	536, 1446
BaeI	ACNNNNGTAYC	2 cut(s)	924, 957
BalI	TGGCCA	1 cut(s)	56
BanI	GGYRCC	2 cut(s)	314, 1738
BanII	GRGCYC	1 cut(s)	719
BbrPI	CACGTG	1 cut(s)	1441
Bbv12I	GWGCWC	1 cut(s)	838
BbvI	GCAGC	5 cut(s)	85, 947, 1000, 1138, 1564
BccI	CCATC	8 cut(s)	118, 319, 515, 853, 1443, 1508, 1512, 1805
BceAI	ACGGC	2 cut(s)	302, 1077
BciT130I	CCWGG	3 cut(s)	262, 483, 1743
BciVI	GTATCC	2 cut(s)	518, 1080
BclI	TGATCA	1 cut(s)	79
BcnI	CCSGG	4 cut(s)	160, 344, 840, 1605
BcoDI	GTCTC	2 cut(s)	900, 1700
BfaI	CTAG	4 cut(s)	299, 1236, 1527, 1734
BfmI	CTRYAG	2 cut(s)	961, 1294
BfuAI	ACCTGC	3 cut(s)	103, 299, 1018
BfuI	GTATCC	2 cut(s)	518, 1080
BisI	GCNGC	6 cut(s)	24, 99, 961, 1014, 1127, 1578
BlnI	CCTAGG	1 cut(s)	1733
BlsI	GCNGC	6 cut(s)	25, 100, 962, 1015, 1128, 1579
Bme1390I	CCNGG	7 cut(s)	160, 262, 344, 483, 840, 1605, 1743
Bme18I	GGWCC	3 cut(s)	733, 1141, 1635
BmeT110I	CYCGRG	1 cut(s)	915
BmgT120I	GGNCC	4 cut(s)	207, 733, 1141, 1635
BmiI	GGNNCC	5 cut(s)	316, 488, 1143, 1636, 1740
BmrFI	CCNGG	7 cut(s)	160, 262, 344, 483, 840, 1605, 1743
BmsI	GCATC	1 cut(s)	1900
BpmI	CTGGAG	2 cut(s)	396, 1350
Bpu10I	CCTNAGC	2 cut(s)	140, 693
Bpu14I	TTCGAA	1 cut(s)	1389
BpuEI	CTTGAG	3 cut(s)	167, 921, 1574
BpuMI	CCSGG	4 cut(s)	160, 344, 840, 1605
BsaAI	YACGTR	1 cut(s)	1441
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaI	GGTCTC	1 cut(s)	900
BsaJI	CCNNGG	7 cut(s)	40, 481, 482, 870, 1008, 1672, 1733
BsaWI	WCCGGW	2 cut(s)	1108, 1474
Bsc4I	CCNNNNNNNGG	3 cut(s)	902, 1236, 1416
Bse1I	ACTGG	2 cut(s)	418, 896
Bse8I	GATNNNNATC	1 cut(s)	1053
BseAI	TCCGGA	1 cut(s)	1108
BseBI	CCWGG	3 cut(s)	262, 483, 1743
BseDI	CCNNGG	7 cut(s)	40, 481, 482, 870, 1008, 1672, 1733
BseGI	GGATG	3 cut(s)	765, 1519, 1523
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	3 cut(s)	902, 1236, 1416
BseMII	CTCAG	3 cut(s)	183, 707, 1163
BseNI	ACTGG	2 cut(s)	418, 896
BseSI	GKGCMC	2 cut(s)	536, 1446
BseXI	GCAGC	5 cut(s)	85, 947, 1000, 1138, 1564
BsgI	GTGCAG	3 cut(s)	84, 327, 522
Bsh1236I	CGCG	1 cut(s)	802
BshFI	GGCC	3 cut(s)	56, 209, 1409
BshNI	GGYRCC	2 cut(s)	314, 1738
BsiHKAI	GWGCWC	1 cut(s)	838
BsiHKCI	CYCGRG	1 cut(s)	915
BsiSI	CCGG	6 cut(s)	160, 344, 840, 1109, 1475, 1605
BsiWI	CGTACG	1 cut(s)	246
BslFI	GGGAC	4 cut(s)	376, 738, 1367, 1648
BslI	CCNNNNNNNGG	3 cut(s)	902, 1236, 1416
BsmAI	GTCTC	2 cut(s)	900, 1700
BsmFI	GGGAC	4 cut(s)	376, 738, 1367, 1648
BsmI	GAATGC	1 cut(s)	193
BsnI	GGCC	3 cut(s)	56, 209, 1409
Bso31I	GGTCTC	1 cut(s)	900
BsoBI	CYCGRG	1 cut(s)	915
Bsp119I	TTCGAA	1 cut(s)	1389
Bsp1286I	GDGCHC	4 cut(s)	536, 719, 838, 1446
Bsp13I	TCCGGA	1 cut(s)	1108
Bsp1407I	TGTACA	1 cut(s)	270
Bsp143I	GATC	4 cut(s)	79, 640, 994, 1715
BspACI	CCGC	6 cut(s)	24, 402, 800, 1580, 1703, 1780
BspANI	GGCC	3 cut(s)	56, 209, 1409
BspCNI	CTCAG	3 cut(s)	184, 706, 1162
BspEI	TCCGGA	1 cut(s)	1108
BspFNI	CGCG	1 cut(s)	802
BspLI	GGNNCC	5 cut(s)	316, 488, 1143, 1636, 1740
BspMAI	CTGCAG	2 cut(s)	965, 1298
BspMI	ACCTGC	3 cut(s)	103, 299, 1018
BspPI	GGATC	2 cut(s)	1002, 1723
BspT104I	TTCGAA	1 cut(s)	1389
BspT107I	GGYRCC	2 cut(s)	314, 1738
BspTNI	GGTCTC	1 cut(s)	900
BsrGI	TGTACA	1 cut(s)	270
BsrI	ACTGG	2 cut(s)	418, 896
BssECI	CCNNGG	7 cut(s)	40, 481, 482, 870, 1008, 1672, 1733
BssMI	GATC	4 cut(s)	79, 640, 994, 1715
BssT1I	CCWWGG	5 cut(s)	40, 870, 1008, 1672, 1733
Bst2UI	CCWGG	3 cut(s)	262, 483, 1743
Bst4CI	ACNGT	1 cut(s)	332
Bst6I	CTCTTC	1 cut(s)	1380
BstAPI	GCANNNNNTGC	1 cut(s)	314
BstAUI	TGTACA	1 cut(s)	270
BstBAI	YACGTR	1 cut(s)	1441
BstBI	TTCGAA	1 cut(s)	1389
BstC8I	GCNNGC	4 cut(s)	984, 1198, 1202, 1423
BstDEI	CTNAG	5 cut(s)	140, 192, 693, 1149, 1186
BstF5I	GGATG	3 cut(s)	765, 1519, 1523
BstFNI	CGCG	1 cut(s)	802
BstKTI	GATC	4 cut(s)	82, 643, 997, 1718
BstMAI	GTCTC	2 cut(s)	900, 1700
BstMBI	GATC	4 cut(s)	79, 640, 994, 1715
BstMWI	GCNNNNNNNGC	5 cut(s)	215, 314, 386, 1683, 1747
BstNI	CCWGG	3 cut(s)	262, 483, 1743
BstNSI	RCATGY	2 cut(s)	1305, 1496
BstSCI	CCNGG	7 cut(s)	158, 260, 342, 481, 838, 1603, 1741
BstSFI	CTRYAG	2 cut(s)	961, 1294
BstSLI	GKGCMC	2 cut(s)	536, 1446
BstUI	CGCG	1 cut(s)	802
BstV1I	GCAGC	5 cut(s)	85, 947, 1000, 1138, 1564
BstXI	CCANNNNNNTGG	1 cut(s)	71
BsuI	GTATCC	2 cut(s)	518, 1080
BsuRI	GGCC	3 cut(s)	56, 209, 1409
BtgZI	GCGATG	1 cut(s)	90
BtsCI	GGATG	3 cut(s)	765, 1519, 1523
BtsI	GCAGTG	1 cut(s)	1451
BtsIMutI	CAGTG	3 cut(s)	411, 460, 1451
BveI	ACCTGC	3 cut(s)	103, 299, 1018
Cac8I	GCNNGC	4 cut(s)	984, 1198, 1202, 1423
Cfr13I	GGNCC	4 cut(s)	207, 733, 1141, 1635
Csp6I	GTAC	5 cut(s)	247, 271, 565, 1040, 1317
CviAII	CATG	8 cut(s)	31, 204, 784, 1302, 1493, 1555, 1880, 1895
CviQI	GTAC	5 cut(s)	247, 271, 565, 1040, 1317
DdeI	CTNAG	5 cut(s)	140, 192, 693, 1149, 1186
DpnI	GATC	4 cut(s)	81, 642, 996, 1717
DpnII	GATC	4 cut(s)	79, 640, 994, 1715
EaeI	YGGCCR	1 cut(s)	54
Eam1104I	CTCTTC	1 cut(s)	1380
EarI	CTCTTC	1 cut(s)	1380
EciI	GGCGGA	1 cut(s)	1718
Eco130I	CCWWGG	5 cut(s)	40, 870, 1008, 1672, 1733
Eco24I	GRGCYC	1 cut(s)	719
Eco31I	GGTCTC	1 cut(s)	900
Eco47I	GGWCC	3 cut(s)	733, 1141, 1635
Eco72I	CACGTG	1 cut(s)	1441
Eco88I	CYCGRG	1 cut(s)	915
EcoRII	CCWGG	3 cut(s)	260, 481, 1741
EcoT14I	CCWWGG	5 cut(s)	40, 870, 1008, 1672, 1733
EcoT22I	ATGCAT	1 cut(s)	1621
EcoT38I	GRGCYC	1 cut(s)	719
ErhI	CCWWGG	5 cut(s)	40, 870, 1008, 1672, 1733
FaeI	CATG	8 cut(s)	34, 207, 787, 1305, 1496, 1558, 1883, 1898
FaqI	GGGAC	4 cut(s)	376, 738, 1367, 1648
FatI	CATG	8 cut(s)	30, 203, 783, 1301, 1492, 1554, 1879, 1894
FauNDI	CATATG	1 cut(s)	655
FbaI	TGATCA	1 cut(s)	79
Fnu4HI	GCNGC	6 cut(s)	24, 99, 961, 1014, 1127, 1578
FokI	GGATG	3 cut(s)	772, 1526, 1530
FriOI	GRGCYC	1 cut(s)	719
Fsp4HI	GCNGC	6 cut(s)	24, 99, 961, 1014, 1127, 1578
FspBI	CTAG	4 cut(s)	299, 1236, 1527, 1734
GluI	GCNGC	6 cut(s)	24, 99, 961, 1014, 1127, 1578
GsuI	CTGGAG	2 cut(s)	396, 1350
HaeIII	GGCC	3 cut(s)	56, 209, 1409
HapII	CCGG	6 cut(s)	160, 344, 840, 1109, 1475, 1605
Hin1II	CATG	8 cut(s)	34, 207, 787, 1305, 1496, 1558, 1883, 1898
HincII	GTYRAC	2 cut(s)	235, 517
HindII	GTYRAC	2 cut(s)	235, 517
HindIII	AAGCTT	1 cut(s)	1596
HinfI	GANTC	6 cut(s)	168, 295, 583, 1054, 1171, 1280
HpaI	GTTAAC	1 cut(s)	517
HpaII	CCGG	6 cut(s)	160, 344, 840, 1109, 1475, 1605
HphI	GGTGA	3 cut(s)	344, 650, 709
Hpy166II	GTNNAC	4 cut(s)	235, 517, 1141, 1853
Hpy188I	TCNGA	3 cut(s)	905, 1504, 1647
Hpy8I	GTNNAC	4 cut(s)	235, 517, 1141, 1853
Hpy99I	CGWCG	1 cut(s)	1651
HpyAV	CCTTC	3 cut(s)	220, 1399, 1830
HpyCH4III	ACNGT	1 cut(s)	332
HpyCH4IV	ACGT	6 cut(s)	245, 567, 727, 1440, 1649, 1807
HpyF10VI	GCNNNNNNNGC	5 cut(s)	215, 314, 386, 1683, 1747
HpyF3I	CTNAG	5 cut(s)	140, 192, 693, 1149, 1186
HpySE526I	ACGT	6 cut(s)	245, 567, 727, 1440, 1649, 1807
Hsp92II	CATG	8 cut(s)	34, 207, 787, 1305, 1496, 1558, 1883, 1898
Kpn2I	TCCGGA	1 cut(s)	1108
Ksp22I	TGATCA	1 cut(s)	79
KspAI	GTTAAC	1 cut(s)	517
Kzo9I	GATC	4 cut(s)	79, 640, 994, 1715
LmnI	GCTCC	3 cut(s)	377, 841, 1735
Lsp1109I	GCAGC	5 cut(s)	85, 947, 1000, 1138, 1564
LweI	GCATC	1 cut(s)	1900
MaeI	CTAG	4 cut(s)	299, 1236, 1527, 1734
MaeII	ACGT	6 cut(s)	245, 567, 727, 1440, 1649, 1807
MaeIII	GTNAC	4 cut(s)	125, 604, 697, 1607
MalI	GATC	4 cut(s)	81, 642, 996, 1717
MboI	GATC	4 cut(s)	79, 640, 994, 1715
MfeI	CAATTG	3 cut(s)	648, 1468, 1543
MhlI	GDGCHC	4 cut(s)	536, 719, 838, 1446
MlsI	TGGCCA	1 cut(s)	56
MluNI	TGGCCA	1 cut(s)	56
MlyI	GAGTC	1 cut(s)	1289
MmeI	TCCRAC	3 cut(s)	334, 1632, 1670
Mox20I	TGGCCA	1 cut(s)	56
Mph1103I	ATGCAT	1 cut(s)	1621
MroI	TCCGGA	1 cut(s)	1108
MroXI	GAANNNNTTC	1 cut(s)	1374
MscI	TGGCCA	1 cut(s)	56
MseI	TTAA	5 cut(s)	516, 746, 1104, 1679, 1770
Msp20I	TGGCCA	1 cut(s)	56
MspI	CCGG	6 cut(s)	160, 344, 840, 1109, 1475, 1605
MspR9I	CCNGG	7 cut(s)	160, 262, 344, 483, 840, 1605, 1743
MunI	CAATTG	3 cut(s)	648, 1468, 1543
Mva1269I	GAATGC	1 cut(s)	193
MvaI	CCWGG	3 cut(s)	262, 483, 1743
MvnI	CGCG	1 cut(s)	802
MwoI	GCNNNNNNNGC	5 cut(s)	215, 314, 386, 1683, 1747
NciI	CCSGG	4 cut(s)	160, 344, 840, 1605
NdeI	CATATG	1 cut(s)	655
NdeII	GATC	4 cut(s)	79, 640, 994, 1715
NlaIII	CATG	8 cut(s)	34, 207, 787, 1305, 1496, 1558, 1883, 1898
NlaIV	GGNNCC	5 cut(s)	316, 488, 1143, 1636, 1740
NmuCI	GTSAC	2 cut(s)	125, 697
NsiI	ATGCAT	1 cut(s)	1621
NspI	RCATGY	2 cut(s)	1305, 1496
NspV	TTCGAA	1 cut(s)	1389
PaeR7I	CTCGAG	1 cut(s)	915
PaqCI	CACCTGC	2 cut(s)	299, 1018
PasI	CCCWGGG	1 cut(s)	482
PciI	ACATGT	1 cut(s)	1301
PcsI	WCGNNNNNNNCGW	2 cut(s)	573, 1386
PctI	GAATGC	1 cut(s)	193
PdmI	GAANNNNTTC	1 cut(s)	1374
PfeI	GAWTC	5 cut(s)	168, 295, 583, 1054, 1171
Pfl23II	CGTACG	1 cut(s)	246
PflFI	GACNNNGTC	1 cut(s)	7
PflMI	CCANNNNNTGG	1 cut(s)	1416
PfoI	TCCNGGA	1 cut(s)	838
PkrI	GCNGC	6 cut(s)	25, 100, 962, 1015, 1128, 1579
PleI	GAGTC	1 cut(s)	1288
PmaCI	CACGTG	1 cut(s)	1441
PmlI	CACGTG	1 cut(s)	1441
PpsI	GAGTC	1 cut(s)	1288
Ppu21I	YACGTR	1 cut(s)	1441
PscI	ACATGT	1 cut(s)	1301
Psp6I	CCWGG	3 cut(s)	260, 481, 1741
PspCI	CACGTG	1 cut(s)	1441
PspGI	CCWGG	3 cut(s)	260, 481, 1741
PspLI	CGTACG	1 cut(s)	246
PspN4I	GGNNCC	5 cut(s)	316, 488, 1143, 1636, 1740
PspPI	GGNCC	4 cut(s)	207, 733, 1141, 1635
PstI	CTGCAG	2 cut(s)	965, 1298
PsyI	GACNNNGTC	1 cut(s)	7
RsaI	GTAC	5 cut(s)	248, 272, 566, 1041, 1318
RsaNI	GTAC	5 cut(s)	247, 271, 565, 1040, 1317
SaqAI	TTAA	5 cut(s)	516, 746, 1104, 1679, 1770
SatI	GCNGC	6 cut(s)	24, 99, 961, 1014, 1127, 1578
Sau3AI	GATC	4 cut(s)	79, 640, 994, 1715
Sau96I	GGNCC	4 cut(s)	207, 733, 1141, 1635
SchI	GAGTC	1 cut(s)	1289
ScrFI	CCNGG	7 cut(s)	160, 262, 344, 483, 840, 1605, 1743
SduI	GDGCHC	4 cut(s)	536, 719, 838, 1446
SfaNI	GCATC	1 cut(s)	1900
SfcI	CTRYAG	2 cut(s)	961, 1294
Sfr274I	CTCGAG	1 cut(s)	915
SfuI	TTCGAA	1 cut(s)	1389
SinI	GGWCC	3 cut(s)	733, 1141, 1635
SlaI	CTCGAG	1 cut(s)	915
SmlI	CTYRAG	4 cut(s)	182, 915, 936, 1589
SmoI	CTYRAG	4 cut(s)	182, 915, 936, 1589
SsiI	CCGC	6 cut(s)	24, 402, 800, 1580, 1703, 1780
SspMI	CTAG	4 cut(s)	299, 1236, 1527, 1734
StyD4I	CCNGG	7 cut(s)	158, 260, 342, 481, 838, 1603, 1741
StyI	CCWWGG	5 cut(s)	40, 870, 1008, 1672, 1733
TaaI	ACNGT	1 cut(s)	332
TaiI	ACGT	6 cut(s)	248, 570, 730, 1443, 1652, 1810
TaqI	TCGA	7 cut(s)	508, 628, 806, 916, 1057, 1389, 1718
TatI	WGTACW	1 cut(s)	270
TauI	GCSGC	1 cut(s)	26
TfiI	GAWTC	5 cut(s)	168, 295, 583, 1054, 1171
Tru1I	TTAA	5 cut(s)	516, 746, 1104, 1679, 1770
Tru9I	TTAA	5 cut(s)	516, 746, 1104, 1679, 1770
TscAI	CASTG	3 cut(s)	418, 460, 1458
TseFI	GTSAC	2 cut(s)	125, 697
TseI	GCWGC	5 cut(s)	98, 960, 1013, 1126, 1577
Tsp45I	GTSAC	2 cut(s)	125, 697
TspDTI	ATGAA	3 cut(s)	800, 1248, 1571
TspRI	CASTG	3 cut(s)	418, 460, 1458
Tth111I	GACNNNGTC	1 cut(s)	7
Van91I	CCANNNNNTGG	1 cut(s)	1416
VpaK11BI	GGWCC	3 cut(s)	733, 1141, 1635
XapI	RAATTY	6 cut(s)	432, 444, 770, 1082, 1558, 1900
XceI	RCATGY	2 cut(s)	1305, 1496
XhoI	CTCGAG	1 cut(s)	915
XmaJI	CCTAGG	1 cut(s)	1733
XmnI	GAANNNNTTC	1 cut(s)	1374
XspI	CTAG	4 cut(s)	299, 1236, 1527, 1734
Zsp2I	ATGCAT	1 cut(s)	1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.