Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0009766

Physical Location & Seq

Genomic Coordinates Forward (+)

177631 .. 185111

Gene Structure 7481 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGGCTTCTACCGCTACGGCGTTGTTGCTGTTCACGGCGGCGACGGCGGTCTTATTGGCTGGGTTACCGGGAGCAAAATCGGAGTACATAGCTTATAACACGACGGCCCGAATTGTCCCCGGAAAAATCAATGTTCATTTAGTTCCCCACTCTCACGACGACGCCACCCCGCATTACATGGACTTGATTGATCAGACAACTTTAGGCCATCAATTTATACTGAAAGAATTTGGTCAGGTTCCTCGAGTCGGCTGGCAGATTGACCCTTTTGGCCACTCTGCTGTTCAAGCTTACCTGCTTGGTGCTGAGTTAGGATTCGATTCCCTCTTTTTCGCTCGAATAGATTACCAAGATAGAGCTAAGCGACTCCAGGATAAGACTCTTGAATTTATATGGCAGGGTTCTAGATCCCTTGCTTCATCTTCGCAGATTTTCACAGGCATTTTCCCCAGACATTATGATCCCCCTGATGGTTTCGTATTTGAAATAAATGATGTATCACCCCCTATTCAGGATGACGTTCTCATGTTTGACTACAATGTTCAAGAGCGAGTCAACGACTTTGTTGCAGCTGCTTTAGCACAGGCTAATGTGACAAGAACAAACCATATTATGTGGAACATGGGGACAGATTTCCGCTATCAATATGCAATTTCATGGTTCAGGCAGATGGACAAATTCATTCATTATGTCAATCAGGATGGGCGTGTCAATGCATTGTATTCAACCCCATCAATCTACACTGATGCAAAATATGCAACAAATGAACAATGGCCTCTAAAAACTGATGATTTCTTCCCGTATGCAGATAAACCTAATGCATTTTGGACTGGTTATTTTACAAGTCGTCCAGCCCTTAAAGGTTTTGTCAGAAGTATGAGTGGTTACTATCAGGCAGCTAGGCAATTGGAATTCTTTAGAGGCAGAATTGATTCTGGACAAAATACTGATGCATTAGCTGATGCTTTGGCTATTGCTCAACATCATGATGCAGTTAGTGGTACAGAAAGACAGCATGTTGCTGCTGATTATACAATGCGTCTGTCAATAGGCTATTTGCAGGCTGAAAAGGTGGTTGCTTCCTCTCTTGCTTACCTTTCCAAGTCAGAATCAAGATCCGGACAGGAGCAAACTGTCACAAATTTTCAACAGTGTCCTCTCCTAAATATTAGTTATTGTCCTCCATCAGAAGCTGTCTTGTCTGATGGAAAAAATTTGGTTGTTGTCGTCTACAATCCACTTGGTTGGAAGAGAGAAGAAGTGATACGTATCCCCATTTCCTATGAAAAGGTTACTGTTCAGGATTCCAGTGGAACAGAAATTGAAGCTCAGCTTCTACCCCTATCAAACGCTTCTTTGAGGTTAAGGAGTTACTATGTTAGAGCATATTTAGGTAAAACTCCAGGTGAACCACCCAAGTATTGGCTAGCATTTTCAGTGACAGTACCACCAATTGGTTTCAGTTCTTACACTGTCTCAATTGCAAAACAGACAGGTCGTGGTTCAACTGTCTCCAAAGTATACTCGTTAGAGAGAAGTATGAATAAGACCATAGAAGTTGGGAAAGGAAGTTTAAGGCTGCATTATTCTGTAGATGAAGGAAAACTTGCTCGTTATGTTAATAGCAGAAGTCAGGTTACATCATCTGCTGAACAATCATATAGTTATTATAGTGGAAATGACGGGACTGACAAAGATCCTCAGGCATCTGGGGCATATGTGTTTCGACCAAATAGCACAGTTCCTATACAGTCTGAATGGAAGGTTCCTCTAATTGTCATGCGGGGTCCAGTTCTAGACGAAGTACATCAACAGCTCAATCCATGGGTATCTCAGATTACAAGGGTGTACAAGGAAAAGGATCATGCTGAAATTGAGTTCACTATCGGGCCTATACCCGTGGATGATGGGATTGGGAAGGAAATCACAACTCAAATTACAACAGCCGTGAAGACCAATAAGACATTCTACACAGATTCTAACGGCCGGGACTTCGTTAAACGGGTTCGAGATTTCAGGACAGATTGGGACCTACAAGTGAACCAACCAATAGCTGGAAACTATTACCCTATTAATCTTGGAATTTACGTTCAAGATGGCAGTACAGAAGTTTCAGTCTTGGTTGATCGTGCAGTGGGAGGAACTAGCTTAGTAGATGGTCAAATAGAGCTGATGCTCCACAGGAGGTTGCTTCATGATGATACCCGAGGTGTTGGTGAGGTACTGAATGAAACTGCTTGCATCCCTGAGAAGTGTGAAGGTTTAACTATCCAAGGGAAGTTTTATGTGAGGATCGATAATCTTGGAGAAGGTGCTAAGTGGCGTCGCACGCTTGGACAAGAGATAAATTCTCCGCTTCTTTTGGCCTTCACAGAACAGGATGGAAATGATTGGGTGAATTCTCATGCATCGACTTTCTCTGGAATTGATCCTTCCTATGCTTTACCAAACAATACTGCTGTCATAACACTCCAGGAACTTGAAAATCGTGAAGTACTCCTCCGGCTGGCTCACCTATATGAGATTGGAGAAGACAAAGACTATTCTGTACTGGCGAATGTGGAACTAAAGAAGTTGTTCCCAACAAAGAAGATCAGCAAAGTGACAGAGATGAGTTTGTCGGCCAATCAAGAAAGATCCGAGATGGAGAAGAGGAGGTTAGTATGGAAAGTAGAAGGTTCCGACCAAGAGTTCAAGGTTGTGAGGGGTGGACCTGTCGACCCTGCAAAACTGGTTGTGGAACTAGCCCCAATGGAAATACGCACTTTCATTGTCGACTTTGATCACCTCCGTACGTACGGTTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005774 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0008150 GO:0008152 GO:0009100 GO:0009505 GO:0009987 GO:0015923 GO:0016020 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030312 GO:0031090 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0071944 GO:0098588 GO:0098805 GO:1901135 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

936

Amino Acids

105.05

Weight (kDa)

5.81

Isoelectric Point (pI)

39.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_38N	PF01074	52 - 269	1.7e-45	Glycosyl hydrolases family 38 N-terminal domain
Alpha-mann_mid	PF09261	275 - 366	3.2e-19	Alpha mannosidase middle domain
Laman-like_dom	PF21260	441 - 492	7.9e-08	Lysosomal alpha-mannosidase-like, central domain
Glyco_hydro_38C	PF07748	522 - 736	2.5e-44	Glycosyl hydrolases family 38 C-terminal domain
Glyco_hydro38C2	PF17677	820 - 923	7.7e-07	Glycosyl hydrolases family 38 C-terminal beta sandwich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26720 AT3G26720 AT3G26720 AT3G26720 AT3G26720
fragaria_vesca	FvH4_6g54280 FvH4_6g54280 FvH4_6g54280 FvH4_6g54280
malus_domestica	MD09G1002800.v1.1
prunus_persica	Prupe.3G313400_v2.0.a1 Prupe.3G313400_v2.0.a1
pyrus_communis	pycom111g00230
rosa_chinensis	RchiOBHm_Chr2g0176491
rosa_laevigata	RLG00000022417
rosa_roxburghii	Rroxscaffold_2G00076340
rosa_rugosa	Rorug02G0595100
rosa_samantha	Rh2AG673400 Rh2BG684700 Rh2DG698300
rosa_wichuraiana	Rw2G055230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	96
Acc36I	ACCTGC	1 cut(s)	303
AccB7I	CCANNNNNTGG	3 cut(s)	1422, 1454, 2054
AccI	GTMKAC	4 cut(s)	1230, 1521, 2718, 2775
AccIII	TCCGGA	1 cut(s)	1118
AciI	CCGC	7 cut(s)	12, 38, 47, 170, 637, 1783, 2354
AclWI	GGATC	8 cut(s)	402, 455, 1110, 1691, 1869, 2300, 2423, 2631
AcoI	YGGCCR	3 cut(s)	271, 1984, 2622
AcsI	RAATTY	9 cut(s)	227, 386, 677, 911, 1141, 1213, 2082, 2347, 2398
AcyI	GRCGYC	2 cut(s)	162, 2323
AfiI	CCNNNNNNNGG	7 cut(s)	248, 470, 511, 1422, 1454, 2054, 2506
AjnI	CCWGG	3 cut(s)	369, 1402, 2472
AjuI	GAANNNNNNNTTGG	2 cut(s)	1949, 1981
AloI	GAACNNNNNNTCC	2 cut(s)	2073, 2105
Alw26I	GTCTC	2 cut(s)	1480, 1516
AlwI	GGATC	8 cut(s)	402, 455, 1110, 1691, 1869, 2300, 2423, 2631
AlwNI	CAGNNNCTG	1 cut(s)	1193
Ama87I	CYCGRG	2 cut(s)	243, 2205
Aor13HI	TCCGGA	1 cut(s)	1118
AoxI	GGCC	8 cut(s)	105, 205, 271, 773, 1889, 1984, 2364, 2622
ApeKI	GCWGC	5 cut(s)	569, 572, 896, 1022, 1579
ApoI	RAATTY	9 cut(s)	227, 386, 677, 911, 1141, 1213, 2082, 2347, 2398
AseI	ATTAAT	1 cut(s)	2073
Asp700I	GAANNNNTTC	2 cut(s)	931, 2576
AspS9I	GGNCC	5 cut(s)	106, 1787, 1889, 2029, 2711
AsuC2I	CCSGG	3 cut(s)	69, 120, 1988
AsuHPI	GGTGA	6 cut(s)	492, 1418, 2228, 2407, 2504, 2777
AsuNHI	GCTAGC	1 cut(s)	1426
AvaI	CYCGRG	2 cut(s)	243, 2205
AvaII	GGWCC	3 cut(s)	1787, 2029, 2711
AxyI	CCTNAGG	1 cut(s)	1701
BalI	TGGCCA	1 cut(s)	273
BarI	GAAGNNNNNNTAC	4 cut(s)	1248, 1280, 1621, 1653
BbsI	GAAGAC	2 cut(s)	1958, 2538
BbvI	GCAGC	5 cut(s)	559, 581, 908, 1009, 1566
BceAI	ACGGC	6 cut(s)	33, 51, 60, 120, 1931, 1999
BcgI	CGANNNNNNTGC	2 cut(s)	548, 582
BciT130I	CCWGG	3 cut(s)	371, 1404, 2474
BciVI	GTATCC	1 cut(s)	1280
BclI	TGATCA	2 cut(s)	190, 2782
BcnI	CCSGG	3 cut(s)	69, 120, 1988
BcoDI	GTCTC	2 cut(s)	1480, 1516
BfaI	CTAG	6 cut(s)	405, 900, 1427, 1796, 2145, 2744
BfmI	CTRYAG	1 cut(s)	1590
BfuAI	ACCTGC	1 cut(s)	303
BfuI	GTATCC	1 cut(s)	1280
BisI	GCNGC	6 cut(s)	39, 570, 573, 897, 1023, 1580
BlpI	GCTNAGC	2 cut(s)	360, 1329
BlsI	GCNGC	6 cut(s)	40, 571, 574, 898, 1024, 1581
BmcAI	AGTACT	1 cut(s)	2496
Bme1390I	CCNGG	6 cut(s)	69, 120, 371, 1404, 1988, 2474
Bme18I	GGWCC	3 cut(s)	1787, 2029, 2711
BmeT110I	CYCGRG	2 cut(s)	243, 2205
BmgT120I	GGNCC	5 cut(s)	106, 1787, 1889, 2029, 2711
BmiI	GGNNCC	5 cut(s)	240, 1767, 1788, 2030, 2680
BmrFI	CCNGG	6 cut(s)	69, 120, 371, 1404, 1988, 2474
BmsI	GCATC	8 cut(s)	736, 940, 952, 979, 1715, 2163, 2250, 2417
BmtI	GCTAGC	1 cut(s)	1430
BoxI	GACNNNNGTC	1 cut(s)	47
BpiI	GAAGAC	2 cut(s)	1958, 2538
BpmI	CTGGAG	3 cut(s)	353, 1386, 2456
Bpu1102I	GCTNAGC	2 cut(s)	360, 1329
BpuMI	CCSGG	3 cut(s)	69, 120, 1988
Bsa29I	ATCGAT	1 cut(s)	2295
BsaAI	YACGTR	2 cut(s)	1268, 2796
BsaBI	GATNNNNATC	1 cut(s)	1268
BsaHI	GRCGYC	2 cut(s)	162, 2323
BsaJI	CCNNGG	5 cut(s)	118, 1823, 1899, 2206, 2272
BsaWI	WCCGGW	1 cut(s)	1118
Bsc4I	CCNNNNNNNGG	7 cut(s)	248, 470, 511, 1422, 1454, 2054, 2506
Bse1I	ACTGG	5 cut(s)	835, 1308, 1790, 2556, 2736
Bse21I	CCTNAGG	1 cut(s)	1701
Bse8I	GATNNNNATC	1 cut(s)	1268
BseAI	TCCGGA	1 cut(s)	1118
BseBI	CCWGG	3 cut(s)	371, 1404, 2474
BseCI	ATCGAT	1 cut(s)	2295
BseDI	CCNNGG	5 cut(s)	118, 1823, 1899, 2206, 2272
BseGI	GGATG	5 cut(s)	520, 706, 1909, 2241, 2386
BseJI	GATNNNNATC	1 cut(s)	1268
BseLI	CCNNNNNNNGG	7 cut(s)	248, 470, 511, 1422, 1454, 2054, 2506
BseMII	CTCAG	5 cut(s)	297, 1343, 1715, 1847, 2238
BseNI	ACTGG	5 cut(s)	835, 1308, 1790, 2556, 2736
BseRI	GAGGAG	2 cut(s)	2489, 2668
BseX3I	CGGCCG	1 cut(s)	1984
BseXI	GCAGC	5 cut(s)	559, 581, 908, 1009, 1566
BseYI	CCCAGC	1 cut(s)	59
BsgI	GTGCAG	1 cut(s)	2151
Bsh1285I	CGRYCG	1 cut(s)	1987
BshFI	GGCC	8 cut(s)	107, 207, 273, 775, 1891, 1986, 2366, 2624
BshVI	ATCGAT	1 cut(s)	2295
BsiEI	CGRYCG	1 cut(s)	1987
BsiHKCI	CYCGRG	2 cut(s)	243, 2205
BsiSI	CCGG	5 cut(s)	68, 120, 1119, 1987, 2503
BsiWI	CGTACG	2 cut(s)	2792, 2796
BslFI	GGGAC	5 cut(s)	101, 640, 1699, 2003, 2042
BslI	CCNNNNNNNGG	7 cut(s)	248, 470, 511, 1422, 1454, 2054, 2506
BsmAI	GTCTC	2 cut(s)	1480, 1516
BsmFI	GGGAC	5 cut(s)	101, 640, 1699, 2003, 2042
BsnI	GGCC	8 cut(s)	107, 207, 273, 775, 1891, 1986, 2366, 2624
BsoBI	CYCGRG	2 cut(s)	243, 2205
Bsp13I	TCCGGA	1 cut(s)	1118
Bsp1407I	TGTACA	1 cut(s)	1848
Bsp1720I	GCTNAGC	2 cut(s)	360, 1329
Bsp19I	CCATGG	1 cut(s)	1823
BspACI	CCGC	7 cut(s)	12, 38, 47, 170, 637, 1783, 2354
BspANI	GGCC	8 cut(s)	107, 207, 273, 775, 1891, 1986, 2366, 2624
BspCNI	CTCAG	5 cut(s)	298, 1342, 1714, 1846, 2239
BspDI	ATCGAT	1 cut(s)	2295
BspEI	TCCGGA	1 cut(s)	1118
BspHI	TCATGA	2 cut(s)	985, 2194
BspLI	GGNNCC	5 cut(s)	240, 1767, 1788, 2030, 2680
BspMI	ACCTGC	1 cut(s)	303
BspOI	GCTAGC	1 cut(s)	1430
BspPI	GGATC	8 cut(s)	402, 455, 1110, 1691, 1869, 2300, 2423, 2631
BsrGI	TGTACA	1 cut(s)	1848
BsrI	ACTGG	5 cut(s)	835, 1308, 1790, 2556, 2736
BssECI	CCNNGG	5 cut(s)	118, 1823, 1899, 2206, 2272
BssNAI	GTATAC	1 cut(s)	1522
BssNI	GRCGYC	2 cut(s)	162, 2323
BssT1I	CCWWGG	2 cut(s)	1823, 2272
Bst1107I	GTATAC	1 cut(s)	1522
Bst2UI	CCWGG	3 cut(s)	371, 1404, 2474
Bst4CI	ACNGT	9 cut(s)	1135, 1152, 1297, 1444, 1474, 1510, 1741, 1752, 2801
Bst6I	CTCTTC	2 cut(s)	1244, 2645
BstACI	GRCGYC	2 cut(s)	162, 2323
BstAPI	GCANNNNNTGC	1 cut(s)	755
BstAUI	TGTACA	1 cut(s)	1848
BstBAI	YACGTR	2 cut(s)	1268, 2796
BstC8I	GCNNGC	6 cut(s)	254, 1062, 1428, 2239, 2330, 2508
BstDEI	CTNAG	8 cut(s)	306, 360, 1329, 1701, 1833, 2149, 2247, 2316
BstDSI	CCRYGG	2 cut(s)	1823, 1899
BstEII	GGTNACC	1 cut(s)	63
BstF5I	GGATG	5 cut(s)	520, 706, 1909, 2241, 2386
BstMAI	GTCTC	2 cut(s)	1480, 1516
BstMCI	CGRYCG	1 cut(s)	1987
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 44, 287, 578, 755, 1712, 2329
BstNI	CCWGG	3 cut(s)	371, 1404, 2474
BstNSI	RCATGY	1 cut(s)	1019
BstPAI	GACNNNNGTC	1 cut(s)	47
BstPI	GGTNACC	1 cut(s)	63
BstSCI	CCNGG	6 cut(s)	67, 118, 369, 1402, 1986, 2472
BstSFI	CTRYAG	1 cut(s)	1590
BstSNI	TACGTA	2 cut(s)	1268, 2796
BstV1I	GCAGC	5 cut(s)	559, 581, 908, 1009, 1566
BstV2I	GAAGAC	2 cut(s)	1958, 2538
BstX2I	RGATCY	4 cut(s)	407, 1115, 1696, 2636
BstXI	CCANNNNNNTGG	1 cut(s)	1245
BstYI	RGATCY	4 cut(s)	407, 1115, 1696, 2636
BstZ17I	GTATAC	1 cut(s)	1522
BstZI	CGGCCG	1 cut(s)	1984
Bsu15I	ATCGAT	1 cut(s)	2295
Bsu36I	CCTNAGG	1 cut(s)	1701
BsuI	GTATCC	1 cut(s)	1280
BsuRI	GGCC	8 cut(s)	107, 207, 273, 775, 1891, 1986, 2366, 2624
BsuTUI	ATCGAT	1 cut(s)	2295
BtgI	CCRYGG	2 cut(s)	1823, 1899
BtsCI	GGATG	5 cut(s)	520, 706, 1909, 2241, 2386
BtsI	GCAGTG	1 cut(s)	2139
BtsIMutI	CAGTG	6 cut(s)	741, 1157, 1315, 1443, 1470, 2139
BveI	ACCTGC	1 cut(s)	303
Cac8I	GCNNGC	6 cut(s)	254, 1062, 1428, 2239, 2330, 2508
CaiI	CAGNNNCTG	1 cut(s)	1193
CciI	TCATGA	2 cut(s)	985, 2194
Cfr13I	GGNCC	5 cut(s)	106, 1787, 1889, 2029, 2711
ClaI	ATCGAT	1 cut(s)	2295
CseI	GACGC	3 cut(s)	170, 1028, 2312
DdeI	CTNAG	8 cut(s)	306, 360, 1329, 1701, 1833, 2149, 2247, 2316
EaeI	YGGCCR	3 cut(s)	271, 1984, 2622
EagI	CGGCCG	1 cut(s)	1984
Eam1104I	CTCTTC	2 cut(s)	1244, 2645
EarI	CTCTTC	2 cut(s)	1244, 2645
EclXI	CGGCCG	1 cut(s)	1984
Eco105I	TACGTA	2 cut(s)	1268, 2796
Eco130I	CCWWGG	2 cut(s)	1823, 2272
Eco47I	GGWCC	3 cut(s)	1787, 2029, 2711
Eco52I	CGGCCG	1 cut(s)	1984
Eco81I	CCTNAGG	1 cut(s)	1701
Eco88I	CYCGRG	2 cut(s)	243, 2205
Eco91I	GGTNACC	1 cut(s)	63
EcoO109I	RGGNCCY	1 cut(s)	2029
EcoO65I	GGTNACC	1 cut(s)	63
EcoRI	GAATTC	2 cut(s)	911, 2398
EcoRII	CCWGG	3 cut(s)	369, 1402, 2472
EcoT14I	CCWWGG	2 cut(s)	1823, 2272
EcoT22I	ATGCAT	4 cut(s)	718, 823, 955, 2410
ErhI	CCWWGG	2 cut(s)	1823, 2272
FalI	AAGNNNNNCTT	4 cut(s)	1317, 1349, 1590, 1622
FaqI	GGGAC	5 cut(s)	101, 640, 1699, 2003, 2042
FauI	CCCGC	2 cut(s)	177, 1776
FauNDI	CATATG	1 cut(s)	1717
FbaI	TGATCA	2 cut(s)	190, 2782
FblI	GTMKAC	4 cut(s)	1230, 1521, 2718, 2775
Fnu4HI	GCNGC	6 cut(s)	39, 570, 573, 897, 1023, 1580
FokI	GGATG	5 cut(s)	527, 713, 1916, 2228, 2393
Fsp4HI	GCNGC	6 cut(s)	39, 570, 573, 897, 1023, 1580
FspBI	CTAG	6 cut(s)	405, 900, 1427, 1796, 2145, 2744
GluI	GCNGC	6 cut(s)	39, 570, 573, 897, 1023, 1580
GsaI	CCCAGC	1 cut(s)	63
GsuI	CTGGAG	3 cut(s)	353, 1386, 2456
HaeIII	GGCC	8 cut(s)	107, 207, 273, 775, 1891, 1986, 2366, 2624
HapII	CCGG	5 cut(s)	68, 120, 1119, 1987, 2503
HgaI	GACGC	3 cut(s)	170, 1028, 2312
Hin1I	GRCGYC	2 cut(s)	162, 2323
HincII	GTYRAC	3 cut(s)	556, 2719, 2776
HindII	GTYRAC	3 cut(s)	556, 2719, 2776
HindIII	AAGCTT	1 cut(s)	288
HpaII	CCGG	5 cut(s)	68, 120, 1119, 1987, 2503
HphI	GGTGA	6 cut(s)	492, 1418, 2228, 2407, 2504, 2777
Hpy99I	CGWCG	5 cut(s)	46, 106, 161, 164, 2328
HpyAV	CCTTC	8 cut(s)	1592, 1756, 1912, 2252, 2303, 2377, 2442, 2669
HpyCH4III	ACNGT	9 cut(s)	1135, 1152, 1297, 1444, 1474, 1510, 1741, 1752, 2801
HpyCH4IV	ACGT	4 cut(s)	519, 1267, 2088, 2795
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 44, 287, 578, 755, 1712, 2329
HpyF3I	CTNAG	8 cut(s)	306, 360, 1329, 1701, 1833, 2149, 2247, 2316
HpySE526I	ACGT	4 cut(s)	519, 1267, 2088, 2795
Hsp92I	GRCGYC	2 cut(s)	162, 2323
Kpn2I	TCCGGA	1 cut(s)	1118
Ksp22I	TGATCA	2 cut(s)	190, 2782
LmnI	GCTCC	3 cut(s)	71, 1126, 2181
Lsp1109I	GCAGC	5 cut(s)	559, 581, 908, 1009, 1566
LweI	GCATC	8 cut(s)	736, 940, 952, 979, 1715, 2163, 2250, 2417
MaeI	CTAG	6 cut(s)	405, 900, 1427, 1796, 2145, 2744
MaeII	ACGT	4 cut(s)	519, 1267, 2088, 2795
MaeIII	GTNAC	9 cut(s)	63, 592, 884, 1135, 1291, 1370, 1438, 1636, 2602
MboII	GAAGA	8 cut(s)	414, 787, 1261, 1268, 1963, 2543, 2602, 2662
MfeI	CAATTG	3 cut(s)	905, 1452, 1479
MflI	RGATCY	4 cut(s)	407, 1115, 1696, 2636
MlsI	TGGCCA	1 cut(s)	273
MluNI	TGGCCA	1 cut(s)	273
MlyI	GAGTC	4 cut(s)	255, 360, 373, 561
MmeI	TCCRAC	2 cut(s)	1226, 2706
Mox20I	TGGCCA	1 cut(s)	273
Mph1103I	ATGCAT	4 cut(s)	718, 823, 955, 2410
MroI	TCCGGA	1 cut(s)	1118
MroXI	GAANNNNTTC	2 cut(s)	931, 2576
MscI	TGGCCA	1 cut(s)	273
MseI	TTAA	7 cut(s)	858, 1364, 1574, 1620, 1998, 2073, 2264
MslI	CAYNNNNRTG	2 cut(s)	987, 2517
Msp20I	TGGCCA	1 cut(s)	273
MspA1I	CMGCKG	1 cut(s)	572
MspI	CCGG	5 cut(s)	68, 120, 1119, 1987, 2503
MspR9I	CCNGG	6 cut(s)	69, 120, 371, 1404, 1988, 2474
MunI	CAATTG	3 cut(s)	905, 1452, 1479
MvaI	CCWGG	3 cut(s)	371, 1404, 2474
MwoI	GCNNNNNNNGC	7 cut(s)	11, 44, 287, 578, 755, 1712, 2329
NciI	CCSGG	3 cut(s)	69, 120, 1988
NcoI	CCATGG	1 cut(s)	1823
NdeI	CATATG	1 cut(s)	1717
NheI	GCTAGC	1 cut(s)	1426
NlaIV	GGNNCC	5 cut(s)	240, 1767, 1788, 2030, 2680
NmuCI	GTSAC	4 cut(s)	592, 1135, 1438, 2602
NsiI	ATGCAT	4 cut(s)	718, 823, 955, 2410
NspI	RCATGY	1 cut(s)	1019
PaeR7I	CTCGAG	1 cut(s)	243
PagI	TCATGA	2 cut(s)	985, 2194
PcsI	WCGNNNNNNNCGW	1 cut(s)	2801
PdmI	GAANNNNTTC	2 cut(s)	931, 2576
PfeI	GAWTC	6 cut(s)	315, 320, 932, 1109, 1304, 1976
Pfl23II	CGTACG	2 cut(s)	2792, 2796
PflMI	CCANNNNNTGG	3 cut(s)	1422, 1454, 2054
PfoI	TCCNGGA	2 cut(s)	369, 2472
PkrI	GCNGC	6 cut(s)	40, 571, 574, 898, 1024, 1581
PleI	GAGTC	4 cut(s)	254, 360, 373, 560
PpsI	GAGTC	4 cut(s)	254, 360, 373, 560
Ppu21I	YACGTR	2 cut(s)	1268, 2796
PpuMI	RGGWCCY	1 cut(s)	2029
PshAI	GACNNNNGTC	1 cut(s)	47
PshBI	ATTAAT	1 cut(s)	2073
PsiI	TTATAA	1 cut(s)	96
Psp5II	RGGWCCY	1 cut(s)	2029
Psp6I	CCWGG	3 cut(s)	369, 1402, 2472
PspEI	GGTNACC	1 cut(s)	63
PspFI	CCCAGC	1 cut(s)	59
PspGI	CCWGG	3 cut(s)	369, 1402, 2472
PspLI	CGTACG	2 cut(s)	2792, 2796
PspN4I	GGNNCC	5 cut(s)	240, 1767, 1788, 2030, 2680
PspPI	GGNCC	5 cut(s)	106, 1787, 1889, 2029, 2711
PspPPI	RGGWCCY	1 cut(s)	2029
PspXI	VCTCGAGB	1 cut(s)	243
PsrI	GAACNNNNNNTAC	1 cut(s)	2785
PstNI	CAGNNNCTG	1 cut(s)	1193
PsuI	RGATCY	4 cut(s)	407, 1115, 1696, 2636
PvuII	CAGCTG	1 cut(s)	572
RseI	CAYNNNNRTG	2 cut(s)	987, 2517
SalI	GTCGAC	2 cut(s)	2717, 2774
SaqAI	TTAA	7 cut(s)	858, 1364, 1574, 1620, 1998, 2073, 2264
SatI	GCNGC	6 cut(s)	39, 570, 573, 897, 1023, 1580
Sau96I	GGNCC	5 cut(s)	106, 1787, 1889, 2029, 2711
ScaI	AGTACT	1 cut(s)	2496
SchI	GAGTC	4 cut(s)	255, 360, 373, 561
ScrFI	CCNGG	6 cut(s)	69, 120, 371, 1404, 1988, 2474
SfaNI	GCATC	8 cut(s)	736, 940, 952, 979, 1715, 2163, 2250, 2417
SfcI	CTRYAG	1 cut(s)	1590
Sfr274I	CTCGAG	1 cut(s)	243
SinI	GGWCC	3 cut(s)	1787, 2029, 2711
SlaI	CTCGAG	1 cut(s)	243
SmiMI	CAYNNNNRTG	2 cut(s)	987, 2517
SmlI	CTYRAG	1 cut(s)	243
SmoI	CTYRAG	1 cut(s)	243
SnaBI	TACGTA	2 cut(s)	1268, 2796
SsiI	CCGC	7 cut(s)	12, 38, 47, 170, 637, 1783, 2354
SspI	AATATT	1 cut(s)	1168
SspMI	CTAG	6 cut(s)	405, 900, 1427, 1796, 2145, 2744
StyD4I	CCNGG	6 cut(s)	67, 118, 369, 1402, 1986, 2472
StyI	CCWWGG	2 cut(s)	1823, 2272
TaaI	ACNGT	9 cut(s)	1135, 1152, 1297, 1444, 1474, 1510, 1741, 1752, 2801
TaiI	ACGT	4 cut(s)	522, 1270, 2091, 2798
TaqI	TCGA	9 cut(s)	244, 318, 337, 1726, 2008, 2295, 2411, 2718, 2775
TatI	WGTACW	6 cut(s)	84, 1804, 1848, 2102, 2494, 2548
TauI	GCSGC	1 cut(s)	41
TfiI	GAWTC	6 cut(s)	315, 320, 932, 1109, 1304, 1976
Tru1I	TTAA	7 cut(s)	858, 1364, 1574, 1620, 1998, 2073, 2264
Tru9I	TTAA	7 cut(s)	858, 1364, 1574, 1620, 1998, 2073, 2264
TscAI	CASTG	6 cut(s)	748, 1157, 1315, 1443, 1477, 2139
TseFI	GTSAC	4 cut(s)	592, 1135, 1438, 2602
TseI	GCWGC	5 cut(s)	569, 572, 896, 1022, 1579
Tsp45I	GTSAC	4 cut(s)	592, 1135, 1438, 2602
TspGWI	ACGGA	1 cut(s)	2780
TspRI	CASTG	6 cut(s)	748, 1157, 1315, 1443, 1477, 2139
Van91I	CCANNNNNTGG	3 cut(s)	1422, 1454, 2054
VpaK11BI	GGWCC	3 cut(s)	1787, 2029, 2711
VspI	ATTAAT	1 cut(s)	2073
XapI	RAATTY	9 cut(s)	227, 386, 677, 911, 1141, 1213, 2082, 2347, 2398
XbaI	TCTAGA	2 cut(s)	404, 1795
XceI	RCATGY	1 cut(s)	1019
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1419, 2051
XhoI	CTCGAG	1 cut(s)	243
XmiI	GTMKAC	4 cut(s)	1230, 1521, 2718, 2775
XmnI	GAANNNNTTC	2 cut(s)	931, 2576
XspI	CTAG	6 cut(s)	405, 900, 1427, 1796, 2145, 2744
ZrmI	AGTACT	1 cut(s)	2496
Zsp2I	ATGCAT	4 cut(s)	718, 823, 955, 2410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.