pycom111g03540

Belongs to the histidine acid phosphatase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
OG0004152
Physical Location & Seq
Forward (+)
2172686 .. 2181879
9194 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g03540.6

Sequence Viewer

Length: 3210 bp
ATGGAGGAGGAGCAGGAGAGAGAAACCGGAGAGAAGATAAAGATTGGAGTTTGTGTGATGGAAAAGAAGGTGTTTTCGGCGCCCATGGGGCAGATTCTCGAACGGCTGCAAGCGTTTGGCGAATTTGAGATCATACATTTTAGGGATAGAGTCATTCTTGAAGATCCAATTGAAAGCTGGCCAATTTGTGACTGCTTGATTGCCTTTCATTCCTCCGGCTATCCTCTGGAAAAGGCTGAGGCATATGCTGCTTTAAGGAAGCCTTTTCTAGTAAATGAGTTGGAGCCGCAACACCTTCTCCATGACCGAAGGAAGGTTTATGAGCATCTTGAAATGCACGGAGTCTCTGTTCCCAGATATGCCCTTGTAAATAGAGAAGTACCTTATCAAGAGCTGGACTATTTTATTGAGGAAGAAGATTTTGTTGAGGTTCATGGTCAGCGTTTCTGGAAGCCATTTGTAGAGAAGCCTGTTGAAGGGGATGATCATAGTATAATGATATATTATCCCAGTTCGGCAGGTGGAGGAATGAAGGAATTGTTTCGGAAGGTTGGTAACCGATCTAGTGATTTCCATCCGGATGTTAGACGAGTGAGACGTGAAGGCTCTTATATATACGAGGAATTCATGCCAACTGGAGGAACAGATGTCAAGGTGTATACAGTGGGACCTGAATATGCACATGCTGAGGCAAGGAAGTCTCCTGTTGTTGATGGTGTTGTCATGAGAAATCCTGATGGCAAGGAAGTGAGGTATCCGGTTTTACTGACACCCACTGAGAAGCAAATGGCAAGAGAGGTCTGCATTGCATTTAGGCAAGCGGTTTGTGGGTTTGACCTTTTGCGCTGTGAGGGACGCTCCTATGTTTGTGACGTAAATGGATGGAGTTTCGTAAAGAACTCTCACAAGTATTATGATGATGCTGCTTGTGTGCTCAGGAAGTTACTTTTAGATGCCAAGGCCCCTCATCTTTCTTCTGCAATTCCACCAACATTACCATGGAAAGTCAATGAACCAAGCCAACCTACTGAGAGACTAACTCGTCAAGGAAGTGGAATCATTGGCACATTTGGGCAGTCGGAGGAGCTACGTTGTGTTATTGCTATTATTCGTCATGGTGATAGAACTCCCAAACAGAAGGTAAAGCTGAAGGTTACTGAGGAAAAGCTGCTAAACTTGATGCTTAAGTACAATGGTGGACGACCTAGATCCGAGACGAAATTGAAAAGTGCTGTCCAATTGCAAGATTTATTAGATGCCACACGAATGCTAGTACCTCGTACTAGACCAGGTCGAGAAAGTGATAGTGAGGCAGAAGACATTGAACATGCTGAAAAGCTTCGTCAAGTGAAAGCAGTGCTTGAGGAGGGGGGCCATTTCTCTGGCATTTATAGGAAGGTTCAACTAAAGCCATTAAAGTGGGTTAAAGTGGCAAAAAGTAATGGGGAAGGTGAGGAAGAACGCCCAGTTGAAGCTTTGATGGTTCTTAAATATGGGGGTGTCCTTACACATGCTGGAAGAAAGCAGGCTGAGGAGCTGGGTAGATATTTTCGGAATAATATGTATCCAGGTGAAGGTACCGGCCTGCTTCGCCTCCATAGCACCTATCGTCATGATCTTAAAATCTACAGCTCTGATGAGGGCCGTGTGCAGATGTCTGCCGCTGCTTTTGCTAAAGGCCTACTTGATCTTGAAGGGCAGCTAACACCAATCCTGGTTTCCCTTGTTAGCAAGGACTCCTCTATGTTGGATGGACTAGACAATGCAAGTGTTGAGATGGACGAAGCAAAGGCTAGGTTGAATGAGATTATTACTTCTGGTTTAAAGACGGGTAATAACAGTGCAACACCTCCTTGGATGGCTGATGGAGGTGGTCTGCCTTTAGATGCTTCCGAACTTCTACCTAAATTGGTAAAATTGACTAAGAAGGTCACTGAACAAGTACGACTGCTAGCAAAGAATGAAAATGAGGAACTTACAAAGACAAGCTCAGATGATGTAACACTTCCTTATGACCAAGCAAGGGCCCTTGGTAAGACTAACATTGATGTTGATCGTATTGCTGCTGGATTACCATGCGGTAGTGAGGGATTCCTTTTGATGTATGCTCGATGGAGAAAGCTTGCAAAGGACTTGTACAGTGAACGAAAAGAACGATTCGACTTAACACAAATTCCAGATGTTTATGACTCGTGCAAATACGATCTCCTGCATAACGCACATCTTAATCTGGAAGGTCTGGATGAGCTGTTCAAAATTGCTCAGTTGCTTGCAGATGGAGTCATCCCAAATGAGTATGGCATTAATCCAACACAGAAACTCAATATTGGTTCAAAGATTGCTCGTCGTTTGTTGGGTAAGATAATGATTGACCTGAGAAATACTCGTGAAGAAGCCATCAGTGTTGCTGCTGAACCAAAGATCGATCAGGATGAACATTCAAAGTCAACCAATACCGAGAAGGAAGATAAGAAGCATCATCCCAAGCTTCATGTTAAGATTGATGACAGAAAATCTAGCACAAGTGATACGCCAAAGCTTTCTGCTAAGAACGAAGATACGAGGAGACCCAGTACAACAAGCGAGATATCAATAGATCAGGATGACGACGATGATAAAGAGACCCAATACCGTTTGGATCCAAAGTATGCAAATGTCAGAACGCCTGAACGGCATGTGCGGACGCGCCTGTACTTTACATCAGAATCTCACATCCACTCTCTCATGAATGTTCTCCGTTACTGTAACCTGGACGAGTCTCTTCAAGGAGAGGATGGCCTAGTTTGCCATTGTGCTTTGGAGCGTTTATACAATACTAAGGAGCTTGACTACATGAGTTATATAGTTCTGAGGATGTTCGAGAACACAGCAGTAGCTCTTGAAGACACAAAAAAATTCCGCGTGGAACTGACCTTTAGCCGTGGTGCAGACCTATCGCCATTGGAGAAGAATGACAGTAAGGCTACGTTTTTGCGTCAAGAGCACACACTACCGGTTATGGGTCCGGAAAGGTTGCAAGAAGTGGGGTCGTATCTAACATTAGATAAAATGGAGAAAATGATACGCTCGTTTGCTATGCCAGCAGAAGATTTTCCTCCAGCATCGACTCCAGCAGGATTCACAGGCTATTTCTCAAAAAGCGCAGCAGTGCTCGAGCGCCTGGTAAATCTCTGGCCTTTCCATAAGCATGCTAATTCTAATGGAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000827 GO:0000828 GO:0000829 GO:0000832 GO:0002376 GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0006020 GO:0006066 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009814 GO:0009817 GO:0009861 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0017076 GO:0019222 GO:0019637 GO:0019751 GO:0030554 GO:0030656 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032553 GO:0032555 GO:0032559 GO:0032958 GO:0033857 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043207 GO:0043647 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046136 GO:0046165 GO:0046173 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0062012 GO:0062013 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090407 GO:0097159 GO:0097367 GO:0098542 GO:1900150 GO:1900367 GO:1901265 GO:1901363 GO:1901576 GO:1901615 GO:1901617 GO:1904965 GO:1904966 GO:1905034 GO:1905036 GO:2000068
KEGG Pathways
Metabolic & Signaling
ko04070 map04070
Pfam Domains
Protein Families
His_Phos_2

Protein Analysis

1070

Amino Acids

121.31

Weight (kDa)

6.19

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 509
AasI GACNNNNNNGTC 1 cut(s) 1041
Acc36I ACCTGC 1 cut(s) 509
Acc65I GGTACC 1 cut(s) 1577
AccB1I GGYRCC 2 cut(s) 79, 1577
AccI GTMKAC 1 cut(s) 659
AccII CGCG 2 cut(s) 2686, 2901
AccIII TCCGGA 2 cut(s) 577, 3004
AciI CCGC 6 cut(s) 287, 821, 1662, 2079, 2680, 2899
AclWI GGATC 4 cut(s) 158, 1203, 2633, 2646
AcoI YGGCCR 1 cut(s) 179
AcsI RAATTY 4 cut(s) 122, 623, 2172, 2894
AcuI CTGAAG 1 cut(s) 1169
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 9 cut(s) 381, 1190, 1275, 1282, 1579, 1944, 2138, 2575, 2693
AfiI CCNNNNNNNGG 6 cut(s) 313, 476, 638, 1574, 2023, 2999
AflII CTTAAG 1 cut(s) 1184
AgeI ACCGGT 1 cut(s) 2992
AjiI CACGTC 1 cut(s) 599
AjnI CCWGG 5 cut(s) 1288, 1567, 1713, 2748, 3159
AjuI GAANNNNNNNTTGG 2 cut(s) 1702, 1734
AloI GAACNNNNNNTCC 4 cut(s) 333, 365, 2234, 2266
Alw21I GWGCWC 3 cut(s) 936, 2985, 3153
Alw26I GTCTC 8 cut(s) 349, 589, 705, 1027, 1208, 2560, 2615, 2763
AlwI GGATC 4 cut(s) 158, 1203, 2633, 2646
Ama87I CYCGRG 1 cut(s) 3152
Aor13HI TCCGGA 2 cut(s) 577, 3004
AoxI GGCC 9 cut(s) 179, 960, 1372, 1582, 1642, 1678, 2025, 2776, 3173
ApaI GGGCCC 1 cut(s) 2029
ApeKI GCWGC 9 cut(s) 106, 248, 923, 1168, 1664, 1699, 2063, 2408, 3143
ApoI RAATTY 4 cut(s) 122, 623, 2172, 2894
AseI ATTAAT 1 cut(s) 2304
AsiGI ACCGGT 1 cut(s) 2992
Asp700I GAANNNNTTC 3 cut(s) 540, 1338, 3090
Asp718I GGTACC 1 cut(s) 1577
AspLEI GCGC 5 cut(s) 82, 846, 2688, 3143, 3159
AspS9I GGNCC 7 cut(s) 668, 961, 1372, 1642, 2025, 2026, 3002
AsuHPI GGTGA 3 cut(s) 1130, 1463, 1583
AsuNHI GCTAGC 1 cut(s) 1951
AvaI CYCGRG 1 cut(s) 3152
AvaII GGWCC 2 cut(s) 668, 3002
BaeGI GKGCMC 1 cut(s) 2029
BaeI ACNNNNGTAYC 2 cut(s) 3053, 3086
BalI TGGCCA 1 cut(s) 181
BamHI GGATCC 1 cut(s) 2638
BanI GGYRCC 2 cut(s) 79, 1577
BanII GRGCYC 1 cut(s) 2029
BauI CACGAG 2 cut(s) 2191, 2385
BbsI GAAGAC 2 cut(s) 1323, 2889
Bbv12I GWGCWC 3 cut(s) 936, 2985, 3153
BbvCI CCTCAGC 3 cut(s) 237, 687, 1530
BbvI GCAGC 9 cut(s) 93, 235, 910, 1155, 1651, 1711, 2050, 2395, 3155
BceAI ACGGC 4 cut(s) 119, 1629, 2687, 2904
BcgI CGANNNNNNTGC 2 cut(s) 2916, 2950
BciT130I CCWGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
BciVI GTATCC 2 cut(s) 765, 1575
BclI TGATCA 1 cut(s) 484
BcoDI GTCTC 8 cut(s) 349, 589, 705, 1027, 1208, 2560, 2615, 2763
BfmI CTRYAG 1 cut(s) 1627
BfoI RGCGCY 2 cut(s) 83, 3160
BfrI CTTAAG 1 cut(s) 1184
BfuAI ACCTGC 1 cut(s) 509
BfuI GTATCC 2 cut(s) 765, 1575
BglI GCCNNNNNGGC 2 cut(s) 88, 2671
Bme1390I CCNGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
Bme18I GGWCC 2 cut(s) 668, 3002
BmeT110I CYCGRG 1 cut(s) 3152
BmgBI CACGTC 1 cut(s) 599
BmgT120I GGNCC 7 cut(s) 668, 961, 1372, 1642, 2025, 2026, 3002
BmiI GGNNCC 9 cut(s) 81, 285, 669, 963, 1373, 1579, 2027, 2640, 3003
BmrFI CCNGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
BmrI ACTGGG 3 cut(s) 504, 1460, 2565
BmsI GCATC 8 cut(s) 334, 910, 943, 1170, 1246, 1876, 2485, 3110
BmtI GCTAGC 1 cut(s) 1955
BmuI ACTGGG 3 cut(s) 504, 1460, 2565
BpiI GAAGAC 2 cut(s) 1323, 2889
BplI GAGNNNNNCTC 6 cut(s) 842, 874, 1024, 1056, 2368, 2400
BpmI CTGGAG 3 cut(s) 657, 3081, 3093
Bpu10I CCTNAGC 4 cut(s) 237, 687, 935, 1530
BpuEI CTTGAG 1 cut(s) 1382
Bsa29I ATCGAT 1 cut(s) 2424
BsaBI GATNNNNATC 2 cut(s) 573, 2052
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 2 cut(s) 2560, 2615
BsaJI CCNNGG 6 cut(s) 84, 957, 998, 1853, 2029, 2920
BsaWI WCCGGW 5 cut(s) 26, 577, 757, 2992, 3004
BsaXI ACNNNNNCTCC 8 cut(s) 39, 69, 282, 312, 333, 363, 2557, 2587
Bsc4I CCNNNNNNNGG 6 cut(s) 313, 476, 638, 1574, 2023, 2999
Bse118I RCCGGY 2 cut(s) 1580, 2992
Bse1I ACTGG 4 cut(s) 510, 640, 1466, 2571
Bse3DI GCAATG 1 cut(s) 804
Bse8I GATNNNNATC 2 cut(s) 573, 2052
BseAI TCCGGA 2 cut(s) 577, 3004
BseBI CCWGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
BseCI ATCGAT 1 cut(s) 2424
BseDI CCNNGG 6 cut(s) 84, 957, 998, 1853, 2029, 2920
BseJI GATNNNNATC 2 cut(s) 573, 2052
BseLI CCNNNNNNNGG 6 cut(s) 313, 476, 638, 1574, 2023, 2999
BseMI GCAATG 1 cut(s) 804
BseNI ACTGG 4 cut(s) 510, 640, 1466, 2571
BseRI GAGGAG 7 cut(s) 20, 23, 1097, 1379, 1547, 1729, 2578
BseSI GKGCMC 1 cut(s) 2029
BseXI GCAGC 9 cut(s) 93, 235, 910, 1155, 1651, 1711, 2050, 2395, 3155
BseYI CCCAGC 1 cut(s) 1537
BsgI GTGCAG 2 cut(s) 1670, 2946
Bsh1236I CGCG 2 cut(s) 2686, 2901
BshFI GGCC 9 cut(s) 181, 962, 1374, 1584, 1644, 1680, 2027, 2778, 3175
BshNI GGYRCC 2 cut(s) 79, 1577
BshTI ACCGGT 1 cut(s) 2992
BshVI ATCGAT 1 cut(s) 2424
BsiHKAI GWGCWC 3 cut(s) 936, 2985, 3153
BsiHKCI CYCGRG 1 cut(s) 3152
BsiSI CCGG 7 cut(s) 27, 216, 578, 758, 1581, 2993, 3005
BslFI GGGAC 2 cut(s) 681, 867
BslI CCNNNNNNNGG 6 cut(s) 313, 476, 638, 1574, 2023, 2999
BsmAI GTCTC 8 cut(s) 349, 589, 705, 1027, 1208, 2560, 2615, 2763
BsmBI CGTCTC 2 cut(s) 589, 1208
BsmFI GGGAC 2 cut(s) 681, 867
BsmI GAATGC 1 cut(s) 1272
BsnI GGCC 9 cut(s) 181, 962, 1374, 1584, 1644, 1680, 2027, 2778, 3175
Bso31I GGTCTC 2 cut(s) 2560, 2615
BsoBI CYCGRG 1 cut(s) 3152
Bsp120I GGGCCC 1 cut(s) 2025
Bsp1286I GDGCHC 4 cut(s) 936, 2029, 2985, 3153
Bsp13I TCCGGA 2 cut(s) 577, 3004
Bsp1407I TGTACA 1 cut(s) 2136
Bsp19I CCATGG 2 cut(s) 84, 998
BspACI CCGC 6 cut(s) 287, 821, 1662, 2079, 2680, 2899
BspANI GGCC 9 cut(s) 181, 962, 1374, 1584, 1644, 1680, 2027, 2778, 3175
BspDI ATCGAT 1 cut(s) 2424
BspEI TCCGGA 2 cut(s) 577, 3004
BspFNI CGCG 2 cut(s) 2686, 2901
BspHI TCATGA 3 cut(s) 723, 1612, 2724
BspLI GGNNCC 9 cut(s) 81, 285, 669, 963, 1373, 1579, 2027, 2640, 3003
BspMI ACCTGC 1 cut(s) 509
BspOI GCTAGC 1 cut(s) 1955
BspPI GGATC 4 cut(s) 158, 1203, 2633, 2646
BspT107I GGYRCC 2 cut(s) 79, 1577
BspTI CTTAAG 1 cut(s) 1184
BspTNI GGTCTC 2 cut(s) 2560, 2615
BsrDI GCAATG 1 cut(s) 804
BsrFI RCCGGY 2 cut(s) 1580, 2992
BsrGI TGTACA 1 cut(s) 2136
BsrI ACTGG 4 cut(s) 510, 640, 1466, 2571
BssAI RCCGGY 2 cut(s) 1580, 2992
BssECI CCNNGG 6 cut(s) 84, 957, 998, 1853, 2029, 2920
BssNAI GTATAC 1 cut(s) 660
BssNI GRCGYC 1 cut(s) 80
BssSI CACGAG 2 cut(s) 2191, 2385
BssT1I CCWWGG 5 cut(s) 84, 957, 998, 1853, 2029
Bst1107I GTATAC 1 cut(s) 660
Bst2BI CACGAG 2 cut(s) 2191, 2385
Bst2UI CCWGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
Bst4CI ACNGT 6 cut(s) 664, 1841, 2141, 2633, 2744, 2957
Bst6I CTCTTC 1 cut(s) 2766
BstACI GRCGYC 1 cut(s) 80
BstAFI CTTAAG 1 cut(s) 1184
BstAPI GCANNNNNTGC 1 cut(s) 248
BstAUI TGTACA 1 cut(s) 2136
BstDSI CCRYGG 3 cut(s) 84, 998, 2920
BstEII GGTNACC 1 cut(s) 554
BstENI CCTNNNNNAGG 1 cut(s) 474
BstFNI CGCG 2 cut(s) 2686, 2901
BstH2I RGCGCY 2 cut(s) 83, 3160
BstHHI GCGC 5 cut(s) 82, 846, 2688, 3143, 3159
BstMAI GTCTC 8 cut(s) 349, 589, 705, 1027, 1208, 2560, 2615, 2763
BstMWI GCNNNNNNNGC 9 cut(s) 88, 248, 1590, 1599, 1670, 2671, 2784, 2980, 3080
BstNI CCWGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
BstNSI RCATGY 5 cut(s) 686, 1331, 1514, 2678, 3191
BstPI GGTNACC 1 cut(s) 554
BstSCI CCNGG 5 cut(s) 1288, 1567, 1713, 2748, 3159
BstSFI CTRYAG 1 cut(s) 1627
BstSLI GKGCMC 1 cut(s) 2029
BstUI CGCG 2 cut(s) 2686, 2901
BstV1I GCAGC 9 cut(s) 93, 235, 910, 1155, 1651, 1711, 2050, 2395, 3155
BstV2I GAAGAC 2 cut(s) 1323, 2889
BstX2I RGATCY 3 cut(s) 163, 1208, 2638
BstXI CCANNNNNNTGG 2 cut(s) 1382, 1419
BstYI RGATCY 3 cut(s) 163, 1208, 2638
BstZ17I GTATAC 1 cut(s) 660
Bsu15I ATCGAT 1 cut(s) 2424
BsuI GTATCC 2 cut(s) 765, 1575
BsuRI GGCC 9 cut(s) 181, 962, 1374, 1584, 1644, 1680, 2027, 2778, 3175
BsuTUI ATCGAT 1 cut(s) 2424
BtgI CCRYGG 3 cut(s) 84, 998, 2920
BtrI CACGTC 1 cut(s) 599
BtsI GCAGTG 2 cut(s) 1362, 3153
BtsIMutI CAGTG 8 cut(s) 669, 774, 1362, 1846, 1932, 2146, 2407, 3153
BveI ACCTGC 1 cut(s) 509
CciI TCATGA 3 cut(s) 723, 1612, 2724
CfoI GCGC 5 cut(s) 82, 846, 2688, 3143, 3159
Cfr10I RCCGGY 2 cut(s) 1580, 2992
Cfr13I GGNCC 7 cut(s) 668, 961, 1372, 1642, 2025, 2026, 3002
ClaI ATCGAT 1 cut(s) 2424
CseI GACGC 3 cut(s) 864, 2692, 2963
CsiI ACCWGGT 1 cut(s) 1288
Csp6I GTAC 9 cut(s) 380, 1189, 1274, 1281, 1578, 1943, 2137, 2574, 2692
CspAI ACCGGT 1 cut(s) 2992
CviQI GTAC 9 cut(s) 380, 1189, 1274, 1281, 1578, 1943, 2137, 2574, 2692
DinI GGCGCC 1 cut(s) 81
DraI TTTAAA 1 cut(s) 1824
DrdI GACNNNNNNGTC 1 cut(s) 1041
DseDI GACNNNNNNGTC 1 cut(s) 1041
EaeI YGGCCR 1 cut(s) 179
Eam1104I CTCTTC 1 cut(s) 2766
EarI CTCTTC 1 cut(s) 2766
Eco130I CCWWGG 5 cut(s) 84, 957, 998, 1853, 2029
Eco147I AGGCCT 1 cut(s) 1680
Eco24I GRGCYC 1 cut(s) 2029
Eco31I GGTCTC 2 cut(s) 2560, 2615
Eco32I GATATC 1 cut(s) 2589
Eco47I GGWCC 2 cut(s) 668, 3002
Eco57I CTGAAG 1 cut(s) 1169
Eco88I CYCGRG 1 cut(s) 3152
Eco91I GGTNACC 1 cut(s) 554
EcoNI CCTNNNNNAGG 1 cut(s) 474
EcoO109I RGGNCCY 4 cut(s) 668, 961, 2025, 2026
EcoO65I GGTNACC 1 cut(s) 554
EcoRI GAATTC 1 cut(s) 623
EcoRII CCWGG 5 cut(s) 1288, 1567, 1713, 2748, 3159
EcoRV GATATC 1 cut(s) 2589
EcoT14I CCWWGG 5 cut(s) 84, 957, 998, 1853, 2029
EcoT38I GRGCYC 1 cut(s) 2029
EgeI GGCGCC 1 cut(s) 81
EheI GGCGCC 1 cut(s) 81
ErhI CCWWGG 5 cut(s) 84, 957, 998, 1853, 2029
Esp3I CGTCTC 2 cut(s) 589, 1208
FalI AAGNNNNNCTT 6 cut(s) 247, 279, 1344, 1376, 1668, 1700
FaqI GGGAC 2 cut(s) 681, 867
FauNDI CATATG 1 cut(s) 244
FbaI TGATCA 1 cut(s) 484
FblI GTMKAC 1 cut(s) 659
FriOI GRGCYC 1 cut(s) 2029
GlaI GCGC 5 cut(s) 81, 845, 2687, 3142, 3158
GsaI CCCAGC 1 cut(s) 1541
GsuI CTGGAG 3 cut(s) 657, 3081, 3093
HaeII RGCGCY 2 cut(s) 83, 3160
HaeIII GGCC 9 cut(s) 181, 962, 1374, 1584, 1644, 1680, 2027, 2778, 3175
HapII CCGG 7 cut(s) 27, 216, 578, 758, 1581, 2993, 3005
HgaI GACGC 3 cut(s) 864, 2692, 2963
HhaI GCGC 5 cut(s) 82, 846, 2688, 3143, 3159
Hin1I GRCGYC 1 cut(s) 80
Hin6I GCGC 5 cut(s) 80, 844, 2686, 3141, 3157
HinP1I GCGC 5 cut(s) 80, 844, 2686, 3141, 3157
HincII GTYRAC 1 cut(s) 2448
HindII GTYRAC 1 cut(s) 2448
HindIII AAGCTT 5 cut(s) 1337, 1473, 2120, 2486, 2537
HpaII CCGG 7 cut(s) 27, 216, 578, 758, 1581, 2993, 3005
HphI GGTGA 3 cut(s) 1130, 1463, 1583
Hpy166II GTNNAC 4 cut(s) 660, 1199, 2144, 2448
Hpy8I GTNNAC 4 cut(s) 660, 1199, 2144, 2448
Hpy99I CGWCG 2 cut(s) 2349, 2612
HpyCH4III ACNGT 6 cut(s) 664, 1841, 2141, 2633, 2744, 2957
HpyCH4IV ACGT 4 cut(s) 598, 873, 1090, 2966
HpyF10VI GCNNNNNNNGC 9 cut(s) 88, 248, 1590, 1599, 1670, 2671, 2784, 2980, 3080
HpySE526I ACGT 4 cut(s) 598, 873, 1090, 2966
Hsp92I GRCGYC 1 cut(s) 80
HspAI GCGC 5 cut(s) 80, 844, 2686, 3141, 3157
KasI GGCGCC 1 cut(s) 79
Kpn2I TCCGGA 2 cut(s) 577, 3004
KpnI GGTACC 1 cut(s) 1581
Ksp22I TGATCA 1 cut(s) 484
LmnI GCTCC 7 cut(s) 10, 283, 863, 1084, 1534, 2800, 2821
Lsp1109I GCAGC 9 cut(s) 93, 235, 910, 1155, 1651, 1711, 2050, 2395, 3155
LweI GCATC 8 cut(s) 334, 910, 943, 1170, 1246, 1876, 2485, 3110
MabI ACCWGGT 1 cut(s) 1288
MaeII ACGT 4 cut(s) 598, 873, 1090, 2966
MaeIII GTNAC 9 cut(s) 188, 554, 869, 942, 1153, 1930, 1999, 2738, 2744
MfeI CAATTG 2 cut(s) 168, 1238
MflI RGATCY 3 cut(s) 163, 1208, 2638
MhlI GDGCHC 4 cut(s) 936, 2029, 2985, 3153
MlsI TGGCCA 1 cut(s) 181
MluNI TGGCCA 1 cut(s) 181
Mly113I GGCGCC 1 cut(s) 80
MlyI GAGTC 7 cut(s) 159, 351, 1730, 2183, 2289, 2765, 3100
MmeI TCCRAC 4 cut(s) 261, 1059, 1728, 2333
Mox20I TGGCCA 1 cut(s) 181
MroI TCCGGA 2 cut(s) 577, 3004
MroXI GAANNNNTTC 3 cut(s) 540, 1338, 3090
MscI TGGCCA 1 cut(s) 181
MslI CAYNNNNRTG 5 cut(s) 579, 997, 1265, 1417, 3186
Msp20I TGGCCA 1 cut(s) 181
MspA1I CMGCKG 1 cut(s) 1664
MspCI CTTAAG 1 cut(s) 1184
MspI CCGG 7 cut(s) 27, 216, 578, 758, 1581, 2993, 3005
MspR9I CCNGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
MunI CAATTG 2 cut(s) 168, 1238
Mva1269I GAATGC 1 cut(s) 1272
MvaI CCWGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
MvnI CGCG 2 cut(s) 2686, 2901
MwoI GCNNNNNNNGC 9 cut(s) 88, 248, 1590, 1599, 1670, 2671, 2784, 2980, 3080
NarI GGCGCC 1 cut(s) 80
NcoI CCATGG 2 cut(s) 84, 998
NdeI CATATG 1 cut(s) 244
NheI GCTAGC 1 cut(s) 1951
NlaIV GGNNCC 9 cut(s) 81, 285, 669, 963, 1373, 1579, 2027, 2640, 3003
NmuCI GTSAC 3 cut(s) 188, 869, 1930
NspI RCATGY 5 cut(s) 686, 1331, 1514, 2678, 3191
PaeI GCATGC 1 cut(s) 3191
PaeR7I CTCGAG 1 cut(s) 3152
PagI TCATGA 3 cut(s) 723, 1612, 2724
PaqCI CACCTGC 1 cut(s) 509
PceI AGGCCT 1 cut(s) 1680
PcsI WCGNNNNNNNCGW 2 cut(s) 595, 2152
PctI GAATGC 1 cut(s) 1272
PdmI GAANNNNTTC 3 cut(s) 540, 1338, 3090
PfeI GAWTC 6 cut(s) 94, 1056, 2091, 2157, 2705, 3117
PflFI GACNNNGTC 1 cut(s) 1290
PinAI ACCGGT 1 cut(s) 2992
PleI GAGTC 7 cut(s) 158, 350, 1730, 2183, 2288, 2764, 3100
PluTI GGCGCC 1 cut(s) 83
PpsI GAGTC 7 cut(s) 158, 350, 1730, 2183, 2288, 2764, 3100
PpuMI RGGWCCY 1 cut(s) 668
PshBI ATTAAT 1 cut(s) 2304
Psp5II RGGWCCY 1 cut(s) 668
Psp6I CCWGG 5 cut(s) 1288, 1567, 1713, 2748, 3159
PspEI GGTNACC 1 cut(s) 554
PspFI CCCAGC 1 cut(s) 1537
PspGI CCWGG 5 cut(s) 1288, 1567, 1713, 2748, 3159
PspN4I GGNNCC 9 cut(s) 81, 285, 669, 963, 1373, 1579, 2027, 2640, 3003
PspOMI GGGCCC 1 cut(s) 2025
PspPI GGNCC 7 cut(s) 668, 961, 1372, 1642, 2025, 2026, 3002
PspPPI RGGWCCY 1 cut(s) 668
PspXI VCTCGAGB 1 cut(s) 3152
PsuI RGATCY 3 cut(s) 163, 1208, 2638
PsyI GACNNNGTC 1 cut(s) 1290
RsaI GTAC 9 cut(s) 381, 1190, 1275, 1282, 1579, 1944, 2138, 2575, 2693
RsaNI GTAC 9 cut(s) 380, 1189, 1274, 1281, 1578, 1943, 2137, 2574, 2692
RseI CAYNNNNRTG 5 cut(s) 579, 997, 1265, 1417, 3186
Sau96I GGNCC 7 cut(s) 668, 961, 1372, 1642, 2025, 2026, 3002
SchI GAGTC 7 cut(s) 159, 351, 1730, 2183, 2289, 2765, 3100
ScrFI CCNGG 5 cut(s) 1290, 1569, 1715, 2750, 3161
SduI GDGCHC 4 cut(s) 936, 2029, 2985, 3153
SexAI ACCWGGT 1 cut(s) 1288
SfaNI GCATC 8 cut(s) 334, 910, 943, 1170, 1246, 1876, 2485, 3110
SfcI CTRYAG 1 cut(s) 1627
SfoI GGCGCC 1 cut(s) 81
Sfr274I CTCGAG 1 cut(s) 3152
SinI GGWCC 2 cut(s) 668, 3002
SlaI CTCGAG 1 cut(s) 3152
SmiMI CAYNNNNRTG 5 cut(s) 579, 997, 1265, 1417, 3186
SmlI CTYRAG 3 cut(s) 1184, 1361, 3152
SmoI CTYRAG 3 cut(s) 1184, 1361, 3152
SphI GCATGC 1 cut(s) 3191
SseBI AGGCCT 1 cut(s) 1680
SsiI CCGC 6 cut(s) 287, 821, 1662, 2079, 2680, 2899
SspDI GGCGCC 1 cut(s) 79
SspI AATATT 1 cut(s) 2326
StuI AGGCCT 1 cut(s) 1680
StyD4I CCNGG 5 cut(s) 1288, 1567, 1713, 2748, 3159
StyI CCWWGG 5 cut(s) 84, 957, 998, 1853, 2029
TaaI ACNGT 6 cut(s) 664, 1841, 2141, 2633, 2744, 2957
TaiI ACGT 4 cut(s) 601, 876, 1093, 2969
TaqI TCGA 8 cut(s) 99, 1294, 2110, 2160, 2424, 2859, 3104, 3153
TaqII GACCGA 1 cut(s) 321
TatI WGTACW 4 cut(s) 1188, 2136, 2573, 2691
TauI GCSGC 2 cut(s) 289, 1664
TfiI GAWTC 6 cut(s) 94, 1056, 2091, 2157, 2705, 3117
TscAI CASTG 8 cut(s) 669, 781, 1362, 1846, 1939, 2146, 2407, 3153
TseFI GTSAC 3 cut(s) 188, 869, 1930
TseI GCWGC 9 cut(s) 106, 248, 923, 1168, 1664, 1699, 2063, 2408, 3143
Tsp45I GTSAC 3 cut(s) 188, 869, 1930
TspDTI ATGAA 9 cut(s) 197, 422, 545, 616, 1026, 1977, 2448, 2480, 2741
TspGWI ACGGA 2 cut(s) 354, 2726
TspRI CASTG 8 cut(s) 669, 781, 1362, 1846, 1939, 2146, 2407, 3153
Tth111I GACNNNGTC 1 cut(s) 1290
Vha464I CTTAAG 1 cut(s) 1184
VpaK11BI GGWCC 2 cut(s) 668, 3002
VspI ATTAAT 1 cut(s) 2304
XagI CCTNNNNNAGG 1 cut(s) 474
XapI RAATTY 4 cut(s) 122, 623, 2172, 2894
XceI RCATGY 5 cut(s) 686, 1331, 1514, 2678, 3191
XcmI CCANNNNNNNNNTGG 2 cut(s) 174, 996
XhoI CTCGAG 1 cut(s) 3152
XmiI GTMKAC 1 cut(s) 659
XmnI GAANNNNTTC 3 cut(s) 540, 1338, 3090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.