Rh2DG633700

Belongs to the histidine acid phosphatase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
86242478 .. 86253583
11106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG633700.1

Sequence Viewer

Length: 3180 bp
ATGGAGAAGAAGATTAAGATTGGGGTTTGTGTGATGGAAAAGAAGGTGTTCTCCGCGCCGATGGGGCAGATTCTCGAGCGCCTTCAGGAATTTGGCGAATTCGAGATTACACATTTCGGTGACAAGGTCATTCTGGAAGATCCGGTTGAGAGCTGGCCGATTTGTGATTGCTTGATTGCCTTCCATTCCTCTGGCTATCCTCTGGAAAAGGCTGAAGCATATGCTAATTTAAGGAAACCTTTTCTCGTAAACGAGTTGGAGCCGCAACACCTTCTTCATGACCGAAGGAAGGTATATGAGCGTCTTGAAATGTATGGAATTCCTGTTCCGAGATATGCCCTTGTAAATAGAGAAGCACCATATCAAGAGCTCGACTATTTTGTTGAGGAAGAAGATTTTGTTGAGGTTCATGGTCAACGTTTCTGGAAGCCATTTGTGGAGAAGCCTGTTGAGGGGAATGATCACAGTATAATGATATATTACCCTAGCTCGGCAGGTGGAGGAATGAAGGAGTTGTTTAGGAAGGTTGGTAACCGATCTAGTGAGTTCCATCCAGAGGTGAGAAGAGTGAGACGAGAAGGCTCTTATATATATGAGGAATTCATGCCAACTGGAGGCACAGATGTCAAGGTGTACACGGTGGGCCCTGAATATGCGCATGCTGAGGCAAGGAAATCTCCTGTTGTAGATGGTGTTGTCATGAGAAATCCTGATGGCAAGGAAGTGAGATATCCTGTTTTACTGACACCTACGGAGAAGCAAATGGCAAGGGAGGTCTGCATTGCATTTAGGCAAGCGGTTTGTGGGTTTGATCTTTTACGTTGCGAGGGACGCTCCTATGTCTGTGATGTGAATGGATGGAGTTTCGTGAAGAATTCCTACAAGTATTATGATGATGCTGCTTGTGTGCTCAGGAAGATATTTATAGATGCTAAAGCTCCTCATCTTTCTTCTGTAATTCCACCAACTTTACCATGGAAAATCAATGAACCAAGCCAGCCTTCTGAGGGTCTAACTCGCCAAGGAAGTGGAATCATTGGCACATTTGGGCAGGCTGAGGAACTACGTTGCGTAATTGCCATTATTCGTCATGGTGATAGAACTCCCAAACAGAAAGTAAAGCTGAAGGTTACCGAGGAAAAGCTTCTAAACTTGATGCTAAAGTACAATGGGGGCCGACCTAGATCTGAGACAAAACTGAAAAGTGCTATTCAATTGCAAGATTTGTTGGATGCCACACGGATGCTTGTACCTCGTTCTAGACCAGGTCGAGAAAGTGACAGTGAGGCAGAAGACATTGAGCATGCTGAAAAGCTTCGTCAAGTTAAAGCAGTGCTCGAGGAGGGGGGACACTTCTCAGGCATTTATAGGAAAGTTCAGCTAAAGCCGCTGAAGTGGGATAAAGTTGCTAAAAGTAATGGTGAAGGTGAGGAAGAACGCCCTGTTGAAGCTTTGATGGTTCTTAAGTACGGGGGTGTCCTTACACACGCTGGCAGAAAGCAGGCTGAGGAACTGGGTAGATATTTTCGGAATAACATGTATCCAGGTGAAGGTACTGGCCTGCTTCGCCTCCATAGCACCTATCGCCATGATCTTAAAATCTACAGCTCTGATGAGGGCCGTGTGCAGATGTCTGCAGCTGCATTTGCCAAAGGCCTTCTTGATCTAGAAGGGCAGCTAACACCAATCCTGGTTTCTCTTGTTAGCAAGGACTCCTCTATGTTGGATGGACTTGAAAATGCAAGTGTTGAGATGGAGGAAGCAAAGGCTAGGTTGAACGAGATTATAACTTCAGGTGTAAAGACAGCTCAAAGCAATGGAATATCTCCTTGGATGGCAGATGGAGGGGGACTGCCTCCAAATGCTTTGGAGCTTCTACCTGACTTGGTAAAGTTAACTAAGAAGGTCACTGAACAAGTAAGACAGCTAGCCAAGGATGAAGATGAGGAACTTATGACAAGCTCATATGATGTGATACTTCCTTATGACCAAGCAAAGGCCCTTGGTAAGACTAATATTGACGTTGATCGTATTGCTGCTGGATTACCCTGTGGTAGCGAGGGATTCCTGTTGATGTATGCTCGTTGGAGAAAGCTTGTAAGGGACTTGTACAATGAGCGAAAAGAGCGATTCGACATAACGCAGATTCCAGATGTTTATGACTCCTGCAAATATGATCTTCTACACAATGGGCATCTGAATTTAGACGGTCTAGATGAGCTCTTCAAAGTTGGCCAGTTACTTGCTGATGGTGTCATCCCAAACGAGTATGGCATTAATCCAACACAGAAGCTCAAGATTGGTTCCAAGATCGCTCGTCGTTTACTGGGTAAAATAATGATTGATCTGAGGAATACTCGTGAAGAAGCCATCAGCATTGCAGAACCAAAGAGCACTCAGGATGAACCTTTGAAGTTAACAATTTCGGAGAAGGACGATAAGGAATACCACACAAAGCTTAATGTGAAGAATGATGACAGAAAATGTAGCACAAGTGATGTCCCAAAGCTTCACAACAAGAATGAAGATATGAGGAGATCTAGTATATCAAGTGAGATATCAATGGATCAGGAGGATGATGATGATAAAGAGATCAAATATCGTTTGGACCCGAAGTATGCAAATGTCAGAACACCTGAACGTCATGTTAGAACACGCCTTTACTTTACATCAGAATCTCATATCCATTCTCTAATGAATGTTCTCCGCTACTGCAACCTGGATGAATCTCTTCAAGGAGAGGATGGCCTTGTTTGTGAAAGTGCTTTAGAGCGTTTATACAACACTAAAGAGCTTGACTACATGAGTTATATAGTGCTGAGGATGTTCGAGAACACAGAAGTAGCCTTAGAAGACCCAAAAAGATTTCGTGTAGAAATGACCTTTAGTCGTGGTGCAGATCTATCGCCATTGAAGAAAAATGACAGTGAGGCTGCTTCATTGCATCAAGAGCACACACTGCCGATAATGGGTCCAGAGAGGCTGCAAGAAGTGGGATCATATCTCACATTCGATAAAATGGAGAAAATGATTCGGTCATTTGCTATGCCAGCGGAAGATTTTCCTCCACCATCAACTCCAGCAGGATTCTCGGGCTATTTCTCGAAGAGTGCAGCAGTGCTAGAGCGCCTGGTAAATCTCTGGCCTTTCCATAAGCATGCTAGTTCTAATGGAAAGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1059

Amino Acids

120.42

Weight (kDa)

6.0

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPIP5K2_N PF18086 5 - 94 8.7e-39 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
His_Phos_2 PF00328 354 - 962 1.6e-70 Histidine phosphatase superfamily (branch 2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1787
AarI CACCTGC 1 cut(s) 485
Acc16I TGCGCA 1 cut(s) 657
Acc36I ACCTGC 1 cut(s) 485
AccII CGCG 1 cut(s) 56
AciI CCGC 6 cut(s) 54, 263, 797, 1388, 2707, 3053
AclI AACGTT 1 cut(s) 418
AclWI GGATC 3 cut(s) 134, 2574, 3004
AcoI YGGCCR 2 cut(s) 155, 2233
AcsI RAATTY 6 cut(s) 89, 98, 318, 599, 874, 2200
AcuI CTGAAG 5 cut(s) 68, 234, 1145, 1412, 1776
AfaI GTAC 6 cut(s) 635, 1166, 1251, 1469, 1555, 2111
AfiI CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
AflII CTTAAG 1 cut(s) 1463
AflIII ACRYGT 1 cut(s) 1536
AgsI TTSAA 9 cut(s) 308, 1214, 1448, 1736, 1777, 2227, 2413, 2735, 2914
AhdI GACNNNNNGTC 1 cut(s) 2886
AjnI CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
AjuI GAANNNNNNNTTGG 6 cut(s) 985, 1017, 1678, 1710, 1813, 1845
AloI GAACNNNNNNTCC 2 cut(s) 309, 341
Alw21I GWGCWC 6 cut(s) 372, 912, 1338, 2223, 2396, 2955
Alw26I GTCTC 2 cut(s) 565, 1184
AlwI GGATC 3 cut(s) 134, 2574, 3004
Ama87I CYCGRG 3 cut(s) 74, 1337, 3091
ApaI GGGCCC 1 cut(s) 647
ApeKI GCWGC 8 cut(s) 899, 1637, 1640, 1675, 2036, 2933, 2983, 3113
ApoI RAATTY 6 cut(s) 89, 98, 318, 599, 874, 2200
AseI ATTAAT 1 cut(s) 2277
Asp700I GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
AspLEI GCGC 4 cut(s) 58, 81, 658, 3129
AspS9I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
AsuHPI GGTGA 6 cut(s) 131, 571, 1106, 1433, 1439, 1559
AsuNHI GCTAGC 1 cut(s) 1927
AvaI CYCGRG 3 cut(s) 74, 1337, 3091
AvaII GGWCC 2 cut(s) 2608, 2972
BaeGI GKGCMC 1 cut(s) 647
BalI TGGCCA 1 cut(s) 2235
BanII GRGCYC 3 cut(s) 372, 647, 2223
BarI GAAGNNNNNNTAC 2 cut(s) 863, 895
BauI CACGAG 1 cut(s) 2358
BbsI GAAGAC 2 cut(s) 1299, 2859
Bbv12I GWGCWC 6 cut(s) 372, 912, 1338, 2223, 2396, 2955
BbvCI CCTCAGC 4 cut(s) 663, 1056, 1506, 2819
BbvI GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
BceAI ACGGC 1 cut(s) 1605
BcgI CGANNNNNNTGC 4 cut(s) 2886, 2920, 3072, 3106
BciT130I CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BciVI GTATCC 1 cut(s) 1551
BclI TGATCA 1 cut(s) 460
BcoDI GTCTC 2 cut(s) 565, 1184
BfmI CTRYAG 2 cut(s) 1603, 1635
BfoI RGCGCY 2 cut(s) 82, 3130
BfrI CTTAAG 1 cut(s) 1463
BfuAI ACCTGC 1 cut(s) 485
BfuI GTATCC 1 cut(s) 1551
BglI GCCNNNNNGGC 1 cut(s) 64
BglII AGATCT 3 cut(s) 1184, 2537, 2899
Bme1390I CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
Bme18I GGWCC 2 cut(s) 2608, 2972
BmeRI GACNNNNNGTC 1 cut(s) 2886
BmeT110I CYCGRG 3 cut(s) 74, 1337, 3091
BmgT120I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
BmiI GGNNCC 6 cut(s) 261, 645, 1175, 2305, 2610, 2973
BmrFI CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BmrI ACTGGG 2 cut(s) 1523, 2336
BmsI GCATC 7 cut(s) 886, 919, 1146, 1222, 1233, 2203, 2953
BmtI GCTAGC 1 cut(s) 1931
BmuI ACTGGG 2 cut(s) 1523, 2336
BpiI GAAGAC 2 cut(s) 1299, 2859
BplI GAGNNNNNCTC 4 cut(s) 818, 850, 2341, 2373
BpmI CTGGAG 2 cut(s) 633, 3063
Bpu10I CCTNAGC 5 cut(s) 663, 911, 1056, 1506, 2819
BpuEI CTTGAG 1 cut(s) 2279
BsaJI CCNNGG 6 cut(s) 974, 1021, 1134, 1829, 1932, 2002
BsaWI WCCGGW 1 cut(s) 142
BsaXI ACNNNNNCTCC 2 cut(s) 2527, 2557
Bsc4I CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
Bse1I ACTGG 5 cut(s) 616, 1518, 1561, 2236, 2331
Bse3DI GCAATG 4 cut(s) 780, 1822, 2376, 2939
BseBI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BseDI CCNNGG 6 cut(s) 974, 1021, 1134, 1829, 1932, 2002
BseLI CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
BseMI GCAATG 4 cut(s) 780, 1822, 2376, 2939
BseNI ACTGG 5 cut(s) 616, 1518, 1561, 2236, 2331
BseRI GAGGAG 4 cut(s) 930, 1355, 1705, 2548
BseSI GKGCMC 1 cut(s) 647
BseXI GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
BsgI GTGCAG 3 cut(s) 1646, 2916, 3132
Bsh1236I CGCG 1 cut(s) 56
BsiHKAI GWGCWC 6 cut(s) 372, 912, 1338, 2223, 2396, 2955
BsiHKCI CYCGRG 3 cut(s) 74, 1337, 3091
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 5 cut(s) 843, 1362, 1863, 2117, 2486
BslI CCNNNNNNNGG 9 cut(s) 289, 452, 490, 556, 614, 1007, 1550, 1996, 2969
BsmAI GTCTC 2 cut(s) 565, 1184
BsmBI CGTCTC 1 cut(s) 565
BsmFI GGGAC 5 cut(s) 843, 1362, 1863, 2117, 2486
BsoBI CYCGRG 3 cut(s) 74, 1337, 3091
Bsp120I GGGCCC 1 cut(s) 643
Bsp1286I GDGCHC 7 cut(s) 372, 647, 912, 1338, 2223, 2396, 2955
Bsp1407I TGTACA 2 cut(s) 633, 2109
Bsp19I CCATGG 1 cut(s) 974
BspACI CCGC 6 cut(s) 54, 263, 797, 1388, 2707, 3053
BspFNI CGCG 1 cut(s) 56
BspHI TCATGA 2 cut(s) 277, 699
BspLI GGNNCC 6 cut(s) 261, 645, 1175, 2305, 2610, 2973
BspMAI CTGCAG 1 cut(s) 1639
BspMI ACCTGC 1 cut(s) 485
BspOI GCTAGC 1 cut(s) 1931
BspPI GGATC 3 cut(s) 134, 2574, 3004
BspQI GCTCTTC 1 cut(s) 2228
BspTI CTTAAG 1 cut(s) 1463
BsrDI GCAATG 4 cut(s) 780, 1822, 2376, 2939
BsrGI TGTACA 2 cut(s) 633, 2109
BsrI ACTGG 5 cut(s) 616, 1518, 1561, 2236, 2331
BssECI CCNNGG 6 cut(s) 974, 1021, 1134, 1829, 1932, 2002
BssSI CACGAG 1 cut(s) 2358
BssT1I CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
Bst2BI CACGAG 1 cut(s) 2358
Bst2UI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
Bst4CI ACNGT 5 cut(s) 467, 640, 1283, 2210, 2927
Bst6I CTCTTC 4 cut(s) 559, 2228, 2736, 3101
BstAFI CTTAAG 1 cut(s) 1463
BstAPI GCANNNNNTGC 1 cut(s) 2959
BstAUI TGTACA 2 cut(s) 633, 2109
BstDSI CCRYGG 1 cut(s) 974
BstEII GGTNACC 2 cut(s) 530, 1129
BstFNI CGCG 1 cut(s) 56
BstH2I RGCGCY 2 cut(s) 82, 3130
BstHHI GCGC 4 cut(s) 58, 81, 658, 3129
BstMAI GTCTC 2 cut(s) 565, 1184
BstNI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
BstNSI RCATGY 4 cut(s) 662, 1307, 1540, 3161
BstPI GGTNACC 2 cut(s) 530, 1129
BstSCI CCNGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
BstSFI CTRYAG 2 cut(s) 1603, 1635
BstSLI GKGCMC 1 cut(s) 647
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
BstV2I GAAGAC 2 cut(s) 1299, 2859
BstX2I RGATCY 4 cut(s) 139, 1184, 2537, 2899
BstXI CCANNNNNNTGG 2 cut(s) 191, 1028
BstYI RGATCY 4 cut(s) 139, 1184, 2537, 2899
BsuI GTATCC 1 cut(s) 1551
BtgI CCRYGG 1 cut(s) 974
BtsI GCAGTG 3 cut(s) 1338, 2957, 3123
BtsIMutI CAGTG 6 cut(s) 1288, 1338, 1908, 2932, 2957, 3123
BveI ACCTGC 1 cut(s) 485
CciI TCATGA 2 cut(s) 277, 699
CfoI GCGC 4 cut(s) 58, 81, 658, 3129
Cfr13I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
CseI GACGC 2 cut(s) 290, 840
CsiI ACCWGGT 1 cut(s) 1264
Csp6I GTAC 6 cut(s) 634, 1165, 1250, 1468, 1554, 2110
CviQI GTAC 6 cut(s) 634, 1165, 1250, 1468, 1554, 2110
DriI GACNNNNNGTC 1 cut(s) 2886
EaeI YGGCCR 2 cut(s) 155, 2233
Eam1104I CTCTTC 4 cut(s) 559, 2228, 2736, 3101
Eam1105I GACNNNNNGTC 1 cut(s) 2886
EarI CTCTTC 4 cut(s) 559, 2228, 2736, 3101
Ecl136II GAGCTC 2 cut(s) 370, 2221
Eco130I CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
Eco147I AGGCCT 1 cut(s) 1656
Eco24I GRGCYC 3 cut(s) 372, 647, 2223
Eco32I GATATC 2 cut(s) 731, 2559
Eco47I GGWCC 2 cut(s) 2608, 2972
Eco53kI GAGCTC 2 cut(s) 370, 2221
Eco57I CTGAAG 5 cut(s) 68, 234, 1145, 1412, 1776
Eco88I CYCGRG 3 cut(s) 74, 1337, 3091
Eco91I GGTNACC 2 cut(s) 530, 1129
EcoICRI GAGCTC 2 cut(s) 370, 2221
EcoO109I RGGNCCY 2 cut(s) 644, 1999
EcoO65I GGTNACC 2 cut(s) 530, 1129
EcoRI GAATTC 4 cut(s) 98, 318, 599, 874
EcoRII CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
EcoRV GATATC 2 cut(s) 731, 2559
EcoT14I CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
EcoT38I GRGCYC 3 cut(s) 372, 647, 2223
ErhI CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
Esp3I CGTCTC 1 cut(s) 565
FalI AAGNNNNNCTT 6 cut(s) 223, 255, 985, 1017, 1644, 1676
FaqI GGGAC 5 cut(s) 843, 1362, 1863, 2117, 2486
FauNDI CATATG 2 cut(s) 220, 1966
FbaI TGATCA 1 cut(s) 460
FriOI GRGCYC 3 cut(s) 372, 647, 2223
FspAI RTGCGCAY 1 cut(s) 657
FspI TGCGCA 1 cut(s) 657
GlaI GCGC 4 cut(s) 57, 80, 657, 3128
GsuI CTGGAG 2 cut(s) 633, 3063
HaeII RGCGCY 2 cut(s) 82, 3130
HapII CCGG 1 cut(s) 143
HgaI GACGC 2 cut(s) 290, 840
HhaI GCGC 4 cut(s) 58, 81, 658, 3129
Hin6I GCGC 4 cut(s) 56, 79, 656, 3127
HinP1I GCGC 4 cut(s) 56, 79, 656, 3127
HincII GTYRAC 3 cut(s) 416, 1896, 2418
HindII GTYRAC 3 cut(s) 416, 1896, 2418
HindIII AAGCTT 6 cut(s) 1142, 1313, 1449, 2093, 2456, 2507
HpaI GTTAAC 2 cut(s) 1896, 2418
HpaII CCGG 1 cut(s) 143
HphI GGTGA 6 cut(s) 131, 571, 1106, 1433, 1439, 1559
Hpy166II GTNNAC 7 cut(s) 250, 416, 634, 636, 1896, 2324, 2418
Hpy8I GTNNAC 7 cut(s) 250, 416, 634, 636, 1896, 2324, 2418
Hpy99I CGWCG 1 cut(s) 2322
HpyCH4III ACNGT 5 cut(s) 467, 640, 1283, 2210, 2927
HpyCH4IV ACGT 5 cut(s) 418, 820, 1066, 2022, 2641
HpySE526I ACGT 5 cut(s) 418, 820, 1066, 2022, 2641
HspAI GCGC 4 cut(s) 56, 79, 656, 3127
Ksp22I TGATCA 1 cut(s) 460
KspAI GTTAAC 2 cut(s) 1896, 2418
LguI GCTCTTC 1 cut(s) 2228
LmnI GCTCC 4 cut(s) 259, 839, 943, 1870
Lsp1109I GCAGC 8 cut(s) 886, 1627, 1649, 1687, 2023, 2920, 2970, 3125
LweI GCATC 7 cut(s) 886, 919, 1146, 1222, 1233, 2203, 2953
MabI ACCWGGT 1 cut(s) 1264
MaeII ACGT 5 cut(s) 418, 820, 1066, 2022, 2641
MaeIII GTNAC 6 cut(s) 119, 530, 1129, 1277, 1906, 2238
MfeI CAATTG 1 cut(s) 1214
MflI RGATCY 4 cut(s) 139, 1184, 2537, 2899
MhlI GDGCHC 7 cut(s) 372, 647, 912, 1338, 2223, 2396, 2955
MlsI TGGCCA 1 cut(s) 2235
MluNI TGGCCA 1 cut(s) 2235
MlyI GAGTC 2 cut(s) 1706, 2156
MmeI TCCRAC 5 cut(s) 237, 1209, 1704, 2066, 2306
Mox20I TGGCCA 1 cut(s) 2235
MroXI GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
MscI TGGCCA 1 cut(s) 2235
MseI TTAA 9 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2277, 2417, 2460
MslI CAYNNNNRTG 3 cut(s) 117, 1241, 3156
Msp20I TGGCCA 1 cut(s) 2235
MspA1I CMGCKG 3 cut(s) 1390, 1640, 3053
MspCI CTTAAG 1 cut(s) 1463
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
MunI CAATTG 1 cut(s) 1214
MvaI CCWGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
MvnI CGCG 1 cut(s) 56
NcoI CCATGG 1 cut(s) 974
NdeI CATATG 2 cut(s) 220, 1966
NheI GCTAGC 1 cut(s) 1927
NlaIV GGNNCC 6 cut(s) 261, 645, 1175, 2305, 2610, 2973
NmeAIII GCCGAG 1 cut(s) 470
NmuCI GTSAC 3 cut(s) 119, 1277, 1906
NsbI TGCGCA 1 cut(s) 657
NspI RCATGY 4 cut(s) 662, 1307, 1540, 3161
PaeI GCATGC 3 cut(s) 662, 1307, 3161
PaeR7I CTCGAG 2 cut(s) 74, 1337
PagI TCATGA 2 cut(s) 277, 699
PaqCI CACCTGC 1 cut(s) 485
PceI AGGCCT 1 cut(s) 1656
PciI ACATGT 1 cut(s) 1536
PciSI GCTCTTC 1 cut(s) 2228
PdmI GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
PfeI GAWTC 9 cut(s) 70, 1032, 2064, 2130, 2146, 2675, 2726, 3031, 3087
PflFI GACNNNGTC 2 cut(s) 125, 1266
PleI GAGTC 2 cut(s) 1706, 2156
PpsI GAGTC 2 cut(s) 1706, 2156
PscI ACATGT 1 cut(s) 1536
PshBI ATTAAT 1 cut(s) 2277
PsiI TTATAA 1 cut(s) 1787
Psp124BI GAGCTC 2 cut(s) 372, 2223
Psp1406I AACGTT 1 cut(s) 418
Psp6I CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
PspEI GGTNACC 2 cut(s) 530, 1129
PspGI CCWGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
PspN4I GGNNCC 6 cut(s) 261, 645, 1175, 2305, 2610, 2973
PspOMI GGGCCC 1 cut(s) 643
PspPI GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
PspXI VCTCGAGB 1 cut(s) 1337
PstI CTGCAG 1 cut(s) 1639
PsuI RGATCY 4 cut(s) 139, 1184, 2537, 2899
PsyI GACNNNGTC 2 cut(s) 125, 1266
PvuII CAGCTG 1 cut(s) 1640
RsaI GTAC 6 cut(s) 635, 1166, 1251, 1469, 1555, 2111
RsaNI GTAC 6 cut(s) 634, 1165, 1250, 1468, 1554, 2110
RseI CAYNNNNRTG 3 cut(s) 117, 1241, 3156
SacI GAGCTC 2 cut(s) 372, 2223
SapI GCTCTTC 1 cut(s) 2228
SaqAI TTAA 9 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2277, 2417, 2460
Sau96I GGNCC 7 cut(s) 643, 644, 1174, 1618, 1999, 2608, 2972
SchI GAGTC 2 cut(s) 1706, 2156
ScrFI CCNGG 5 cut(s) 1266, 1545, 1691, 2720, 3131
SduI GDGCHC 7 cut(s) 372, 647, 912, 1338, 2223, 2396, 2955
SexAI ACCWGGT 1 cut(s) 1264
SfaNI GCATC 7 cut(s) 886, 919, 1146, 1222, 1233, 2203, 2953
SfcI CTRYAG 2 cut(s) 1603, 1635
Sfr274I CTCGAG 2 cut(s) 74, 1337
SinI GGWCC 2 cut(s) 2608, 2972
SlaI CTCGAG 2 cut(s) 74, 1337
SmiMI CAYNNNNRTG 3 cut(s) 117, 1241, 3156
SmlI CTYRAG 4 cut(s) 74, 1337, 1463, 2294
SmoI CTYRAG 4 cut(s) 74, 1337, 1463, 2294
SphI GCATGC 3 cut(s) 662, 1307, 3161
SseBI AGGCCT 1 cut(s) 1656
SsiI CCGC 6 cut(s) 54, 263, 797, 1388, 2707, 3053
SspI AATATT 1 cut(s) 2017
SstI GAGCTC 2 cut(s) 372, 2223
StuI AGGCCT 1 cut(s) 1656
StyD4I CCNGG 5 cut(s) 1264, 1543, 1689, 2718, 3129
StyI CCWWGG 5 cut(s) 974, 1021, 1829, 1932, 2002
TaaI ACNGT 5 cut(s) 467, 640, 1283, 2210, 2927
TaiI ACGT 5 cut(s) 421, 823, 1069, 2025, 2644
TaqI TCGA 9 cut(s) 75, 102, 372, 1270, 1338, 2133, 2829, 3012, 3104
TaqII GACCGA 2 cut(s) 297, 3024
TatI WGTACW 3 cut(s) 633, 1164, 2109
TauI GCSGC 2 cut(s) 265, 1390
TfiI GAWTC 9 cut(s) 70, 1032, 2064, 2130, 2146, 2675, 2726, 3031, 3087
Tru1I TTAA 9 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2277, 2417, 2460
Tru9I TTAA 9 cut(s) 15, 230, 1326, 1464, 1596, 1895, 2277, 2417, 2460
TscAI CASTG 6 cut(s) 1288, 1338, 1915, 2932, 2964, 3123
TseFI GTSAC 3 cut(s) 119, 1277, 1906
TseI GCWGC 8 cut(s) 899, 1637, 1640, 1675, 2036, 2933, 2983, 3113
Tsp45I GTSAC 3 cut(s) 119, 1277, 1906
TspGWI ACGGA 2 cut(s) 767, 1255
TspRI CASTG 6 cut(s) 1288, 1338, 1915, 2932, 2964, 3123
Tth111I GACNNNGTC 2 cut(s) 125, 1266
Vha464I CTTAAG 1 cut(s) 1463
VpaK11BI GGWCC 2 cut(s) 2608, 2972
VspI ATTAAT 1 cut(s) 2277
XapI RAATTY 6 cut(s) 89, 98, 318, 599, 874, 2200
XbaI TCTAGA 3 cut(s) 1259, 1666, 2212
XceI RCATGY 4 cut(s) 662, 1307, 1540, 3161
XcmI CCANNNNNNNNNTGG 1 cut(s) 972
XhoI CTCGAG 2 cut(s) 74, 1337
XmnI GAANNNNTTC 5 cut(s) 47, 1143, 1314, 2730, 3060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.