pycom111g05210

May serve as docking site to facilitate the association of other proteins to the plasma membrane

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
3353932 .. 3355683
1752 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g05210.2

Sequence Viewer

Length: 354 bp
ATGGCAGGGGTGCAAGATCAATCGAAGATCAAGTTTCGGTTGACCGATGGATCAGATATTGGCCCCAAAAGCTTTCCTGCTGCTACCACTGTTGTAAACTTGAAGGAAAGCATTCTTGCTCAATGGCCTAAAGATAAGGATAATGGACCAAGGACTGTTAAAGATGTCAAGCTAATAAGTGCAGGAAGAGTACTGGAGAACAACAGAACAGTTGCTGAGTGCCGGAGTCCATTATGTGACGTCCCTGGTGGAGTTACAACTATGCATGTCATTGTTCAACCACCTTCACAGGAGAAAGAAAAAAAACTGATGAATGAACCGAAGCAGAACAAGTGCATTTGTGTTATATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

12.83

Weight (kDa)

9.16

Isoelectric Point (pI)

50.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 352
AatII GACGTC 1 cut(s) 243
AclWI GGATC 1 cut(s) 58
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 1 cut(s) 192
AgsI TTSAA 2 cut(s) 103, 278
AjnI CCWGG 1 cut(s) 244
AluBI AGCT 2 cut(s) 72, 172
AluI AGCT 2 cut(s) 72, 172
AlwI GGATC 1 cut(s) 58
AlwNI CAGNNNCTG 1 cut(s) 215
AoxI GGCC 2 cut(s) 61, 125
ApeKI GCWGC 1 cut(s) 80
Asp700I GAANNNNTTC 1 cut(s) 111
AspS9I GGNCC 2 cut(s) 62, 146
AvaII GGWCC 1 cut(s) 146
BbvI GCAGC 1 cut(s) 67
BccI CCATC 1 cut(s) 41
BciT130I CCWGG 1 cut(s) 246
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
BmcAI AGTACT 1 cut(s) 192
Bme1390I CCNGG 1 cut(s) 246
Bme18I GGWCC 1 cut(s) 146
BmgT120I GGNCC 2 cut(s) 62, 146
BmiI GGNNCC 1 cut(s) 64
BmrFI CCNGG 1 cut(s) 246
BpmI CTGGAG 1 cut(s) 215
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 2 cut(s) 149, 244
Bse1I ACTGG 1 cut(s) 198
BseBI CCWGG 1 cut(s) 246
BseDI CCNNGG 2 cut(s) 149, 244
BseMII CTCAG 1 cut(s) 207
BseNI ACTGG 1 cut(s) 198
BseXI GCAGC 1 cut(s) 67
BsgI GTGCAG 1 cut(s) 201
BshFI GGCC 2 cut(s) 63, 127
BsiSI CCGG 1 cut(s) 223
BslFI GGGAC 1 cut(s) 227
BsmFI GGGAC 1 cut(s) 227
BsmI GAATGC 1 cut(s) 111
BsnI GGCC 2 cut(s) 63, 127
Bsp143I GATC 3 cut(s) 16, 27, 50
BspANI GGCC 2 cut(s) 63, 127
BspCNI CTCAG 1 cut(s) 208
BspLI GGNNCC 1 cut(s) 64
BspPI GGATC 1 cut(s) 58
BsrI ACTGG 1 cut(s) 198
BssECI CCNNGG 2 cut(s) 149, 244
BssMI GATC 3 cut(s) 16, 27, 50
BssNI GRCGYC 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 149
Bst2UI CCWGG 1 cut(s) 246
Bst4CI ACNGT 3 cut(s) 91, 157, 211
Bst6I CTCTTC 1 cut(s) 181
BstACI GRCGYC 1 cut(s) 240
BstDEI CTNAG 1 cut(s) 216
BstKTI GATC 3 cut(s) 19, 30, 53
BstMBI GATC 3 cut(s) 16, 27, 50
BstMWI GCNNNNNNNGC 1 cut(s) 69
BstNI CCWGG 1 cut(s) 246
BstNSI RCATGY 1 cut(s) 269
BstSCI CCNGG 1 cut(s) 244
BstV1I GCAGC 1 cut(s) 67
BsuRI GGCC 2 cut(s) 63, 127
BtsIMutI CAGTG 1 cut(s) 87
CaiI CAGNNNCTG 1 cut(s) 215
Cfr13I GGNCC 2 cut(s) 62, 146
Csp6I GTAC 1 cut(s) 191
CviAII CATG 1 cut(s) 266
CviJI RGCY 4 cut(s) 63, 72, 127, 172
CviKI_1 RGCY 4 cut(s) 63, 72, 127, 172
CviQI GTAC 1 cut(s) 191
DdeI CTNAG 1 cut(s) 216
DpnI GATC 3 cut(s) 18, 29, 52
DpnII GATC 3 cut(s) 16, 27, 50
Eam1104I CTCTTC 1 cut(s) 181
EarI CTCTTC 1 cut(s) 181
Eco130I CCWWGG 1 cut(s) 149
Eco47I GGWCC 1 cut(s) 146
EcoRII CCWGG 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 149
EcoT22I ATGCAT 1 cut(s) 267
ErhI CCWWGG 1 cut(s) 149
FaeI CATG 1 cut(s) 269
FaiI YATR 5 cut(s) 235, 263, 267, 347, 352
FaqI GGGAC 1 cut(s) 227
FatI CATG 1 cut(s) 265
Fnu4HI GCNGC 1 cut(s) 81
Fsp4HI GCNGC 1 cut(s) 81
GluI GCNGC 1 cut(s) 81
GsuI CTGGAG 1 cut(s) 215
HaeIII GGCC 2 cut(s) 63, 127
HapII CCGG 1 cut(s) 223
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 1 cut(s) 269
HincII GTYRAC 1 cut(s) 42
HindII GTYRAC 1 cut(s) 42
HindIII AAGCTT 1 cut(s) 70
HinfI GANTC 1 cut(s) 226
HpaII CCGG 1 cut(s) 223
Hpy166II GTNNAC 2 cut(s) 42, 97
Hpy188I TCNGA 1 cut(s) 55
Hpy8I GTNNAC 2 cut(s) 42, 97
HpyAV CCTTC 2 cut(s) 97, 294
HpyCH4III ACNGT 3 cut(s) 91, 157, 211
HpyCH4IV ACGT 1 cut(s) 240
HpyCH4V TGCA 4 cut(s) 13, 182, 265, 336
HpyF10VI GCNNNNNNNGC 1 cut(s) 69
HpyF3I CTNAG 1 cut(s) 216
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 1 cut(s) 269
Kzo9I GATC 3 cut(s) 16, 27, 50
LpnPI CCDG 7 cut(s) 90, 168, 179, 231, 236, 258, 275
Lsp1109I GCAGC 1 cut(s) 67
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 2 cut(s) 236, 253
MalI GATC 3 cut(s) 18, 29, 52
MboI GATC 3 cut(s) 16, 27, 50
MboII GAAGA 2 cut(s) 37, 198
MlyI GAGTC 1 cut(s) 235
Mph1103I ATGCAT 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 111
MseI TTAA 1 cut(s) 159
MspI CCGG 1 cut(s) 223
MspR9I CCNGG 1 cut(s) 246
Mva1269I GAATGC 1 cut(s) 111
MvaI CCWGG 1 cut(s) 246
MwoI GCNNNNNNNGC 1 cut(s) 69
NdeII GATC 3 cut(s) 16, 27, 50
NlaIII CATG 1 cut(s) 269
NlaIV GGNNCC 1 cut(s) 64
NmuCI GTSAC 1 cut(s) 236
NsiI ATGCAT 1 cut(s) 267
NspI RCATGY 1 cut(s) 269
PctI GAATGC 1 cut(s) 111
PdmI GAANNNNTTC 1 cut(s) 111
PkrI GCNGC 1 cut(s) 82
PleI GAGTC 1 cut(s) 234
PpsI GAGTC 1 cut(s) 234
PsiI TTATAA 1 cut(s) 352
Psp6I CCWGG 1 cut(s) 244
PspGI CCWGG 1 cut(s) 244
PspN4I GGNNCC 1 cut(s) 64
PspPI GGNCC 2 cut(s) 62, 146
PstNI CAGNNNCTG 1 cut(s) 215
RsaI GTAC 1 cut(s) 192
RsaNI GTAC 1 cut(s) 191
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 1 cut(s) 81
Sau3AI GATC 3 cut(s) 16, 27, 50
Sau96I GGNCC 2 cut(s) 62, 146
ScaI AGTACT 1 cut(s) 192
SchI GAGTC 1 cut(s) 235
ScrFI CCNGG 1 cut(s) 246
SetI ASST 4 cut(s) 74, 174, 243, 286
SinI GGWCC 1 cut(s) 146
StyD4I CCNGG 1 cut(s) 244
StyI CCWWGG 1 cut(s) 149
TaaI ACNGT 3 cut(s) 91, 157, 211
TaiI ACGT 1 cut(s) 243
TaqI TCGA 1 cut(s) 23
TaqII GACCGA 1 cut(s) 59
TatI WGTACW 1 cut(s) 190
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 1 cut(s) 94
TseFI GTSAC 1 cut(s) 236
TseI GCWGC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 236
TspDTI ATGAA 2 cut(s) 326, 330
TspRI CASTG 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 146
XceI RCATGY 1 cut(s) 269
XmnI GAANNNNTTC 1 cut(s) 111
ZraI GACGTC 1 cut(s) 241
ZrmI AGTACT 1 cut(s) 192
Zsp2I ATGCAT 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.