pycom11g00120

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0009160
Physical Location & Seq
Forward (+)
116062 .. 128603
12542 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 5217 bp
ATGTCAGATAGTGGGAAAGTGACTCGAGTGGAAGAAGAAGTTGAAGGAGAGCATGTGGAGTCGGCCGACTACATTTTCAAAAGGATCGGCGACCCCCTCCCAATCACGCCTCATGATTCCAGTTTCGATCCCCGAGGCAGCCCTTCCCGGCCTCTCGCCGTCTCCGAGAAACACGGCCTCGTCTTCGTCGCCCATTCCTCTGGGTTTTGCGTTGCGAGGACCAAAGATGTTATGGCTTCGGCCGCTGAGATGGAGGAAAAGGGAAGCTATTCTTCTGTACAGGAGCTGAGTATTGTGGATGTTCCTCTTCCCAACCTACACATTCTCGCACTCTCTACCGACAGTTCTACTCTCGCAGCTACTGTAGATGCAGACATTCACTTCTTCTCCGTCGAATCACTTCTCCATAAGGGTCTCAAACCATCATTGTCTTGTTCGCTCAATGAATCCAAATCTATCAAGGATATGCAGTGGACAAGGAAACCTGAAAACCTTTATGTGGTCCTTTCGGATCTTGGGAAGTTATCTCATGGATCGGTTGGTGGCCTTATGGAAGATGTAATGGACAATGTTGATGCTGTTGGATGGAGTTCTAAAGGAAACTTAATTGCCGTGGCAAGAAAGGATAATATCAGCATTCTATCATCTAACTTTGAGGAGAGGTCATCTATGTTAATTTATTTCAAGCCCTGGGATGAAGATTCTGATGAAAACTGCATTGTAAAAGTGGATTCTATCAGGTGGGTACGCCATGATAGCATCATTCTAGGATGCTTTCAACTGACTGCTCATGGCAATGAAAAAGGTTACCTTGTTCAAGTAATAAAAGTCAAGGATGGCAAATTTACTGATGATTCTTGCAAGCCAGTTGTGATATCTTTCTATGATTTGTTTTCAAATGTCATTGACGACATTCTGCCCTCTGCAAGTGGACCATACTTGTTATTGAGCTATCTGGAGCAATGTGAACTTGCAATTGTCACTAACAGGAAGAATGTGGACGAGCATATTGTGTATCTCAGTTGGTCGCTAGGAGAGGAGAAGAATGAAGTTGTAGTTGTTGATATTTTCCAAGATAGTTTGCTACCAAGGATTGAGCTTCAAGATAATGGTGATGATAATTTGATTCTGGGGCTCTCAGTAGATAAAGTTTCAATAAGTAAAAAGATTAGTGTACGGTTTGGAGAGGAACACAAAGAACTCTCACCATTTTGTGTTCTGATATGTCTTACGCTAGAGGGAAAACTGATTATGTTTCATGTTGCCAGTGTCAGCGGCATTACAGCCTCACCTGCGGTTGTTTCCTCCCTTTCTGATGGTGAGGAGGATTCCACTGCATTGGTACCTGTAGAAAGTGGATCAACTAAACCTTCTTTCCAGCTGGGGAAGGAACAATTTGAAAAGGCTTCTATGGATGTTCCATTGGTTATTGAGGACAGAAAAGAACTTGACAGAAAATTAGGTCTTGATGTCCATGTCAAAGATGACTTGAAATCTCTTAACGCGAATGAGACAGTGATGCCTGGACTTCTTACTCAAATACTCAATAAAGAAATTACTAGTTACAAGGAAGTGGAGCCCCTGAAAAACACTCAATCATTTAAAGCTGAAGGGAAACAAGAAGTTATTGTCCCAAAGCGACATGAAGATGTAGATGGAAACCAAATACAGCTTCCTGGACTGGGAAACAGAAATACTGAGCAAGCATCTACCAACGCTTCTCTTCAAGAAGGGCCTAATTATGTGTTCAGTGACTTTAGCAAGACAGAGGCTCAAAATATTGAAGGACGAGGAACTGGGAGCGTATCTTTTGGTGGTAACGTTGCTGCTGATGCTGCTATAAAATCAAATTCAAATGATAAACGTAATAATTTTGGGATGGGGACAGAATCTCCCGGAAAAATGGAGTCAGCGGGTTTCCAAAGTGTTTCATCTCAGTCACGGTTTGGTGGAACAATCGTATCTTCAAAGGACACTGACGTGAAATCACCACTCATAACTTCAACTTCTATTCAAGGCAGCAGGTCTGGAAATGCTAGCCAAACAAAATTTATTAATATCAAGGATGTATCTGTTAAACCTACTTCAGTCAACTCTTCTGATAGGCTTGGGGAGATTGGCAAATGGAGACCATCAGCGGCAACTGGAAATATTGTGTCAGTGCCTTCCATTTCAAGCTCCCAAACCTTATCGCATGGAAGTTTTTCCTTTGCGAATTCTCCCAACCAGTCAAGGATGCCAAACTCCGAACCGAATTTATCAAAACAATTTGGCAATATCAAAGAGATGACCAAGGAGTTGGATATGCTTCTGCAATCTATAGAGGGAGCAGGTGGTTTCAGGGATGCCTGCACCGTTAATCAGAAGGGGTCAGTTGAAGAATTGGAGAGAGACATAGAGACTCTGTCTGACAAGTGCCGACTTTGGAAGAGCATTATGGATGAACGACTTCGAGAAATACAACATCTGCTTGACACAACTGTACAAGTATTGGCAAGGAAAATATACATGGAGGGAATTGTGAAGCAAGCGTCTGATAGACGATACTGGGACTTCTGGAATTGCCAGAAATTGAGTTCAGAACTTGAGCTTAAGCGGCGACATATTTTAAAAATGAACCAGGATTTGACTGACCAATTAATTCAGTTAGAAAGGCATTTTAATGGCCTTGAACTCAATAAATTTGGTGAAAATGCTGTAGCTCGTGTCAGTGGAAGAGCCTTGCATAGTCGATTTGGGCCCCCAAGACACATTCAGTCCTTGCATAGTTTACATAGCACAATGACGTCACAATTAGCTGCTGCTGATCAACTTTCTGAGTGCCTTTCAAAACAAATGGCAGCACTGAAGATAGAGTCACCTTCTGTAAAGAAGCAGAATGTAAAAAAAGAGTTGTTTGAAACAATAGGGATTCCTTATGATGCCTCTTTCAGTTCCCCTTCCCGTACTCCAAATGAAAAACTATCATTTTCTTTTGGTTCTGCTGCTTCTAAAGATCAGCCCAGGAGAAATGTTAATGCCATAAAAAATTATGAACCAGAAACTGCAAGGAGGAGGAGAGACTCACTGGATAGGAGCTGGGAAAGTTATGAGCCTACAAAAGCAACTGTGAAAAGGTTTCTTTTGAAAGAGAGTGGCAAGGAAAGCGTTAATAGATCATCATTTCCCATTGATAAGCAACAGTTAAGTCCTCCCCCGCTGGAGGGATCAGCAGTTACTCGCCCAAGGGACCACACAAGCCCTATATCCTTCTTGCATCCATCCGTAAACAAATCAGGTATTCAGGGTGCACAACCGAAACAGGCTTTTGAGAGCTCAGCAACGCCATTTGTTTGGGCTGACCTTCCAGGACCATTCCAACGTACTGGGCTGAAGTCTCTTATGCAAGAACACAAAATGTCACCAACATCCCAATTATTCCCTGCAGCCGGGCAAAATTTTACAAGGGAAACTAGCATGACAGCAGAAAGATGTGGCGATGGCATGGCATATATTGGGAAGTATGATTCAGTTCCTATGAAGGAAAAGCCTGTCTTACCATCAGACACCACTCAGAAACCATCATCTTCTAAGGTATCTACACAAACACCGTCTTTGCAGAAGAAACAGAATGATATGCTAAATTCATATGCTAAAGATACTGCACTTCCACCAAAAGAAAGTGTGAAGGATGGGCCTTTGACCACAAGAATGGCATCTACTGAAGCTGGGAAAAAACACGACTTTCCATTTTCTCCCTTATTTTCTGTTCCTATGATTGCTAGCGAGCCTGGAAAGTTTGCCCAGACCGATGCTGCAACAAATAAAAGCCAGACTGATAAAATGCCACCACCTACCACATTCTCAATGTCAGTTTCTGCACCTTCATCTCCAATAATTAGTTCATCATCAGCTCCTCTATCTTCGTCATCAATTCCGCAATCAGTTGCACCAACCTTTTCCTCAACGATGCCCTTAAACAAATCTTTGGCTAGTTCTATCACTGCTGCAGATGAAAGCAAACCTGTGAGTTCAACATCAGAATCTCCAAAGACAGAGATCCAACCACCTTCAAAACCAGACATGAATGCTAATACTACATCACCACGCGTGGAATTTGGGCCTTCCACAGTTGAAGGTAATTTGGAGCTTAAACCTTCAGTGTCATCTCCACCCTCAATTGAGACTTCAACAGGACTTTCATCTGGAGATGAGCCGAGTCTTATCAAGGCTAGTCCTGCAGCAGTAGTGGCATCTGGGAGCCAGACTGGGATGAACGAAACTGCAGGCCCTAAACAGAATGTAACAGTCAATGCTCAACAAGATCAGCCATCTGCTGGGCATTCTCCATTTCCAAATCTACCTACAACGTTAGGGAGTGTTACTGGTGGGATCGATGGCTTGGATGTACAAAATGCTGAGGAGGATGACATGGATGAGGAGACTCTGGACACAAGTAGAGTAAGTGAACTTAGTTTGGGAAGCCTTGGTGGGTTTGGGCTTGGCTCTGCTCCTAAATCCAATCCATTTGGTGGATCATTTGGCAATGCACAAACTGCACAAACAAATGCGACTTCTCCTTTCTCCAGGCCTGTTCCTAGTGGAGAGTTATTTCAGCCTGCCTCCTTTAACTTCCAATCTATAGAGCCTTCCCAATCATCTCTGCCAGCAAATTCAGGTGCATTTGCTGGTGGCTTTGGCACCAGTACTACTGCCCAAGCTCCCATTCCGAGTGGGTTTGGCCAGCCAGCACAGGTTGGGCCAGGGCAGCAAGCATTAGGGTCAGTTCTTGGTGCTTTTGGACAGTCGAGACAGCTTGGTACTAGTCTACCAGGTACTGGTTTTGGATCACCCAGTGGTTTTGGTGGTGGCATTGCTGGCATTACTCCCACCGGTAACTTCACAAGTGCTGCTACTGGAGGATTTGCTGGTGCTGCTTCTGGTGGTGGTGGATTTGCTAGTTTGGCTTCAGGTGGCGGTGGTTCTGCTGCTGCGGCTTCAGGTGGTAGTGGTTTTGCTGCTGCAGCTTCAGGCGGTAGTGGATTTTCGGGTGCAGTTTCAGGCGGTGTGGGATTTGCTGGTGCAGCTTTTGGTGGAGGGGGCTTTGGTGGTACAGCTTCAGGCGGTGGTGGATTTGGGGCATTTGGTGGCCAACAAGGATCTGGCAGTTTCTCTGCTTTTGGTGGTGTAGGAGGAACGGGAAAGCCACCGGAGTTGTTCACACAGATGAGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05169 map03013 map05169
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1739

Amino Acids

184.65

Weight (kDa)

5.63

Isoelectric Point (pI)

51.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_NUP159_NUP214 PF16755 49 - 255 3.3e-09 NUP159/214 beta propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1300, 2321
AatII GACGTC 1 cut(s) 2789
Acc36I ACCTGC 3 cut(s) 1300, 2013, 2321
Acc65I GGTACC 1 cut(s) 1342
AccB1I GGYRCC 2 cut(s) 1342, 4679
AccB7I CCANNNNNTGG 3 cut(s) 4316, 4511, 4817
AccI GTMKAC 1 cut(s) 4807
AccII CGCG 2 cut(s) 1505, 4089
AclI AACGTT 2 cut(s) 1821, 4349
AcoI YGGCCR 4 cut(s) 63, 240, 4720, 5128
AcyI GRCGYC 1 cut(s) 2786
AdeI CACNNNGTG 1 cut(s) 4835
AfiI CCNNNNNNNGG 8 cut(s) 499, 1682, 3202, 3203, 3428, 4316, 4511, 4817
AflII CTTAAG 1 cut(s) 2591
AflIII ACRYGT 1 cut(s) 4087
AgeI ACCGGT 1 cut(s) 4871
AhlI ACTAGT 2 cut(s) 1559, 4802
AjiI CACGTC 1 cut(s) 1981
AjuI GAANNNNNNNTTGG 6 cut(s) 1656, 1688, 3865, 3897, 4689, 4721
AleI CACNNNNGTG 1 cut(s) 1979
Alw21I GWGCWC 2 cut(s) 3292, 3317
Alw44I GTGCAC 1 cut(s) 3288
AlwNI CAGNNNCTG 5 cut(s) 286, 362, 3044, 3857, 4817
Ama87I CYCGRG 2 cut(s) 24, 132
ApaI GGGCCC 1 cut(s) 2742
ApaLI GTGCAC 1 cut(s) 3288
AseI ATTAAT 2 cut(s) 2055, 2639
AsiGI ACCGGT 1 cut(s) 4871
Asp700I GAANNNNTTC 4 cut(s) 268, 399, 2203, 2448
Asp718I GGTACC 1 cut(s) 1342
AsuC2I CCSGG 3 cut(s) 148, 1896, 3430
AsuNHI GCTAGC 2 cut(s) 2036, 3761
AvaI CYCGRG 2 cut(s) 24, 132
AvaII GGWCC 5 cut(s) 219, 502, 932, 3229, 3350
BaeGI GKGCMC 2 cut(s) 2742, 3292
BaeI ACNNNNGTAYC 2 cut(s) 1944, 1977
BalI TGGCCA 2 cut(s) 4722, 5130
BanI GGYRCC 2 cut(s) 1342, 4679
BanII GRGCYC 4 cut(s) 1137, 1581, 2742, 3317
BauI CACGAG 1 cut(s) 2703
BbsI GAAGAC 1 cut(s) 175
Bbv12I GWGCWC 2 cut(s) 3292, 3317
BbvCI CCTCAGC 1 cut(s) 4398
BceAI ACGGC 3 cut(s) 143, 190, 596
BclI TGATCA 1 cut(s) 2806
BcnI CCSGG 3 cut(s) 148, 1896, 3430
BcuI ACTAGT 2 cut(s) 1559, 4802
BfrI CTTAAG 1 cut(s) 2591
BfuAI ACCTGC 3 cut(s) 1300, 2013, 2321
BlpI GCTNAGC 1 cut(s) 3316
BmcAI AGTACT 1 cut(s) 4687
Bme18I GGWCC 5 cut(s) 219, 502, 932, 3229, 3350
BmeT110I CYCGRG 2 cut(s) 24, 132
BmgBI CACGTC 1 cut(s) 1981
BmiI GGNNCC 7 cut(s) 1344, 1578, 2740, 2741, 3230, 4241, 4681
BmrI ACTGGG 6 cut(s) 1691, 1806, 2557, 3375, 4257, 4827
BmtI GCTAGC 2 cut(s) 2040, 3765
BmuI ACTGGG 6 cut(s) 1691, 1806, 2557, 3375, 4257, 4827
BpiI GAAGAC 1 cut(s) 175
BpmI CTGGAG 5 cut(s) 977, 3221, 4206, 4549, 4917
Bpu10I CCTNAGC 1 cut(s) 4398
Bpu1102I GCTNAGC 1 cut(s) 3316
BpuEI CTTGAG 1 cut(s) 2606
BpuMI CCSGG 3 cut(s) 148, 1896, 3430
Bsa29I ATCGAT 1 cut(s) 4374
BsaHI GRCGYC 1 cut(s) 2786
BsaI GGTCTC 2 cut(s) 419, 2122
BsaWI WCCGGW 2 cut(s) 4871, 5188
BsaXI ACNNNNNCTCC 6 cut(s) 39, 69, 371, 401, 1876, 1906
Bsc4I CCNNNNNNNGG 8 cut(s) 499, 1682, 3202, 3203, 3428, 4316, 4511, 4817
Bse118I RCCGGY 1 cut(s) 4871
Bse3DI GCAATG 4 cut(s) 802, 968, 4531, 4851
BseCI ATCGAT 1 cut(s) 4374
BseLI CCNNNNNNNGG 8 cut(s) 499, 1682, 3202, 3203, 3428, 4316, 4511, 4817
BseMI GCAATG 4 cut(s) 802, 968, 4531, 4851
BseRI GAGGAG 8 cut(s) 671, 1052, 1337, 3067, 3070, 3885, 4415, 4433
BseSI GKGCMC 2 cut(s) 2742, 3292
BseX3I CGGCCG 2 cut(s) 63, 240
BseYI CCCAGC 4 cut(s) 1381, 3078, 3707, 4316
BsgI GTGCAG 6 cut(s) 2335, 3627, 3843, 4521, 5052, 5082
Bsh1236I CGCG 2 cut(s) 1505, 4089
Bsh1285I CGRYCG 2 cut(s) 66, 243
BshNI GGYRCC 2 cut(s) 1342, 4679
BshTI ACCGGT 1 cut(s) 4871
BshVI ATCGAT 1 cut(s) 4374
BsiEI CGRYCG 2 cut(s) 66, 243
BsiHKAI GWGCWC 2 cut(s) 3292, 3317
BsiHKCI CYCGRG 2 cut(s) 24, 132
BsiSI CCGG 5 cut(s) 148, 1896, 3429, 4872, 5189
BslFI GGGAC 4 cut(s) 1616, 1897, 2564, 3242
BslI CCNNNNNNNGG 8 cut(s) 499, 1682, 3202, 3203, 3428, 4316, 4511, 4817
BsmBI CGTCTC 1 cut(s) 166
BsmFI GGGAC 4 cut(s) 1616, 1897, 2564, 3242
BsmI GAATGC 3 cut(s) 636, 4072, 4321
Bso31I GGTCTC 2 cut(s) 419, 2122
BsoBI CYCGRG 2 cut(s) 24, 132
Bsp120I GGGCCC 1 cut(s) 2738
Bsp1286I GDGCHC 5 cut(s) 1137, 1581, 2742, 3292, 3317
Bsp1407I TGTACA 3 cut(s) 277, 2482, 4387
Bsp1720I GCTNAGC 1 cut(s) 3316
BspDI ATCGAT 1 cut(s) 4374
BspFNI CGCG 2 cut(s) 1505, 4089
BspHI TCATGA 1 cut(s) 112
BspLI GGNNCC 7 cut(s) 1344, 1578, 2740, 2741, 3230, 4241, 4681
BspMAI CTGCAG 5 cut(s) 3427, 3991, 4222, 4267, 5005
BspMI ACCTGC 3 cut(s) 1300, 2013, 2321
BspOI GCTAGC 2 cut(s) 2040, 3765
BspQI GCTCTTC 2 cut(s) 2423, 2710
BspT107I GGYRCC 2 cut(s) 1342, 4679
BspTI CTTAAG 1 cut(s) 2591
BspTNI GGTCTC 2 cut(s) 419, 2122
BsrDI GCAATG 4 cut(s) 802, 968, 4531, 4851
BsrFI RCCGGY 1 cut(s) 4871
BsrGI TGTACA 3 cut(s) 277, 2482, 4387
BssAI RCCGGY 1 cut(s) 4871
BssNI GRCGYC 1 cut(s) 2786
BssSI CACGAG 1 cut(s) 2703
BssT1I CCWWGG 4 cut(s) 1088, 2292, 3224, 4465
Bst2BI CACGAG 1 cut(s) 2703
Bst6I CTCTTC 5 cut(s) 312, 1728, 2101, 2423, 2710
BstACI GRCGYC 1 cut(s) 2786
BstAFI CTTAAG 1 cut(s) 2591
BstAPI GCANNNNNTGC 1 cut(s) 4535
BstAUI TGTACA 3 cut(s) 277, 2482, 4387
BstDSI CCRYGG 1 cut(s) 612
BstEII GGTNACC 1 cut(s) 806
BstFNI CGCG 2 cut(s) 1505, 4089
BstMCI CGRYCG 2 cut(s) 66, 243
BstNSI RCATGY 1 cut(s) 56
BstPI GGTNACC 1 cut(s) 806
BstSLI GKGCMC 2 cut(s) 2742, 3292
BstUI CGCG 2 cut(s) 1505, 4089
BstV2I GAAGAC 1 cut(s) 175
BstX2I RGATCY 3 cut(s) 511, 4038, 5138
BstXI CCANNNNNNTGG 6 cut(s) 200, 1339, 2299, 3333, 3365, 3691
BstYI RGATCY 3 cut(s) 511, 4038, 5138
BstZI CGGCCG 2 cut(s) 63, 240
Bsu15I ATCGAT 1 cut(s) 4374
BsuTUI ATCGAT 1 cut(s) 4374
BtgI CCRYGG 1 cut(s) 612
BtgZI GCGATG 1 cut(s) 3492
BtrI CACGTC 1 cut(s) 1981
BtsI GCAGTG 3 cut(s) 476, 1332, 3981
BveI ACCTGC 3 cut(s) 1300, 2013, 2321
CaiI CAGNNNCTG 5 cut(s) 286, 362, 3044, 3857, 4817
CciI TCATGA 1 cut(s) 112
Cfr10I RCCGGY 1 cut(s) 4871
ClaI ATCGAT 1 cut(s) 4374
CseI GACGC 1 cut(s) 2520
CsiI ACCWGGT 1 cut(s) 4810
CspAI ACCGGT 1 cut(s) 4871
CspCI CAANNNNNGTGG 2 cut(s) 5175, 5210
DraI TTTAAA 2 cut(s) 1603, 2610
DraIII CACNNNGTG 1 cut(s) 4835
EaeI YGGCCR 4 cut(s) 63, 240, 4720, 5128
EagI CGGCCG 2 cut(s) 63, 240
Eam1104I CTCTTC 5 cut(s) 312, 1728, 2101, 2423, 2710
EarI CTCTTC 5 cut(s) 312, 1728, 2101, 2423, 2710
Ecl136II GAGCTC 1 cut(s) 3315
EclXI CGGCCG 2 cut(s) 63, 240
Eco130I CCWWGG 4 cut(s) 1088, 2292, 3224, 4465
Eco147I AGGCCT 1 cut(s) 4570
Eco24I GRGCYC 4 cut(s) 1137, 1581, 2742, 3317
Eco31I GGTCTC 2 cut(s) 419, 2122
Eco32I GATATC 1 cut(s) 876
Eco47I GGWCC 5 cut(s) 219, 502, 932, 3229, 3350
Eco52I CGGCCG 2 cut(s) 63, 240
Eco53kI GAGCTC 1 cut(s) 3315
Eco88I CYCGRG 2 cut(s) 24, 132
Eco91I GGTNACC 1 cut(s) 806
EcoICRI GAGCTC 1 cut(s) 3315
EcoO109I RGGNCCY 3 cut(s) 1733, 2739, 4268
EcoO65I GGTNACC 1 cut(s) 806
EcoRI GAATTC 1 cut(s) 2215
EcoRV GATATC 1 cut(s) 876
EcoT14I CCWWGG 4 cut(s) 1088, 2292, 3224, 4465
EcoT38I GRGCYC 4 cut(s) 1137, 1581, 2742, 3317
ErhI CCWWGG 4 cut(s) 1088, 2292, 3224, 4465
Esp3I CGTCTC 1 cut(s) 166
FalI AAGNNNNNCTT 6 cut(s) 256, 288, 795, 827, 3518, 3550
FaqI GGGAC 4 cut(s) 1616, 1897, 2564, 3242
FauI CCCGC 2 cut(s) 1906, 3204
FauNDI CATATG 1 cut(s) 3628
FbaI TGATCA 1 cut(s) 2806
FblI GTMKAC 1 cut(s) 4807
FriOI GRGCYC 4 cut(s) 1137, 1581, 2742, 3317
GsaI CCCAGC 4 cut(s) 1385, 3082, 3711, 4320
GsuI CTGGAG 5 cut(s) 977, 3221, 4206, 4549, 4917
HapII CCGG 5 cut(s) 148, 1896, 3429, 4872, 5189
HgaI GACGC 1 cut(s) 2520
Hin1I GRCGYC 1 cut(s) 2786
HincII GTYRAC 1 cut(s) 2092
HindII GTYRAC 1 cut(s) 2092
HpaII CCGG 5 cut(s) 148, 1896, 3429, 4872, 5189
Hpy99I CGWCG 2 cut(s) 191, 395
HpyCH4IV ACGT 6 cut(s) 1821, 1864, 1980, 2786, 3361, 4349
HpySE526I ACGT 6 cut(s) 1821, 1864, 1980, 2786, 3361, 4349
Hsp92I GRCGYC 1 cut(s) 2786
KpnI GGTACC 1 cut(s) 1346
Ksp22I TGATCA 1 cut(s) 2806
LguI GCTCTTC 2 cut(s) 2423, 2710
MabI ACCWGGT 1 cut(s) 4810
MaeII ACGT 6 cut(s) 1821, 1864, 1980, 2786, 3361, 4349
MfeI CAATTG 2 cut(s) 975, 4158
MflI RGATCY 3 cut(s) 511, 4038, 5138
MhlI GDGCHC 5 cut(s) 1137, 1581, 2742, 3292, 3317
MlsI TGGCCA 2 cut(s) 4722, 5130
MluI ACGCGT 1 cut(s) 4087
MluNI TGGCCA 2 cut(s) 4722, 5130
MlyI GAGTC 8 cut(s) 16, 68, 1916, 2395, 2864, 3056, 4207, 4417
MmeI TCCRAC 4 cut(s) 562, 2280, 3382, 4066
Mox20I TGGCCA 2 cut(s) 4722, 5130
MroXI GAANNNNTTC 4 cut(s) 268, 399, 2203, 2448
MscI TGGCCA 2 cut(s) 4722, 5130
MslI CAYNNNNRTG 6 cut(s) 795, 1647, 1979, 2661, 3689, 5204
Msp20I TGGCCA 2 cut(s) 4722, 5130
MspA1I CMGCKG 6 cut(s) 245, 1275, 1381, 1913, 2138, 3199
MspCI CTTAAG 1 cut(s) 2591
MspI CCGG 5 cut(s) 148, 1896, 3429, 4872, 5189
MunI CAATTG 2 cut(s) 975, 4158
Mva1269I GAATGC 3 cut(s) 636, 4072, 4321
MvnI CGCG 2 cut(s) 1505, 4089
NciI CCSGG 3 cut(s) 148, 1896, 3430
NdeI CATATG 1 cut(s) 3628
NheI GCTAGC 2 cut(s) 2036, 3761
NlaIV GGNNCC 7 cut(s) 1344, 1578, 2740, 2741, 3230, 4241, 4681
NmeAIII GCCGAG 1 cut(s) 4221
NmuCI GTSAC 7 cut(s) 19, 979, 1751, 1938, 2787, 2856, 3399
NspI RCATGY 1 cut(s) 56
OliI CACNNNNGTG 1 cut(s) 1979
PaeR7I CTCGAG 1 cut(s) 24
PagI TCATGA 1 cut(s) 112
PaqCI CACCTGC 2 cut(s) 1300, 2321
PasI CCCWGGG 1 cut(s) 690
PceI AGGCCT 1 cut(s) 4570
PciSI GCTCTTC 2 cut(s) 2423, 2710
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 3 cut(s) 636, 4072, 4321
PdmI GAANNNNTTC 4 cut(s) 268, 399, 2203, 2448
PflFI GACNNNGTC 1 cut(s) 2404
PflMI CCANNNNNTGG 3 cut(s) 4316, 4511, 4817
PfoI TCCNGGA 3 cut(s) 1675, 1894, 3346
PinAI ACCGGT 1 cut(s) 4871
PleI GAGTC 8 cut(s) 16, 67, 1915, 2395, 2863, 3056, 4206, 4417
PpsI GAGTC 8 cut(s) 16, 67, 1915, 2395, 2863, 3056, 4206, 4417
PshBI ATTAAT 2 cut(s) 2055, 2639
Psp124BI GAGCTC 1 cut(s) 3317
Psp1406I AACGTT 2 cut(s) 1821, 4349
PspEI GGTNACC 1 cut(s) 806
PspFI CCCAGC 4 cut(s) 1381, 3078, 3707, 4316
PspN4I GGNNCC 7 cut(s) 1344, 1578, 2740, 2741, 3230, 4241, 4681
PspOMI GGGCCC 1 cut(s) 2738
PspXI VCTCGAGB 1 cut(s) 24
PstI CTGCAG 5 cut(s) 3427, 3991, 4222, 4267, 5005
PstNI CAGNNNCTG 5 cut(s) 286, 362, 3044, 3857, 4817
PsuI RGATCY 3 cut(s) 511, 4038, 5138
PsyI GACNNNGTC 1 cut(s) 2404
PvuII CAGCTG 1 cut(s) 1381
RseI CAYNNNNRTG 6 cut(s) 795, 1647, 1979, 2661, 3689, 5204
SacI GAGCTC 1 cut(s) 3317
SapI GCTCTTC 2 cut(s) 2423, 2710
ScaI AGTACT 1 cut(s) 4687
SchI GAGTC 8 cut(s) 16, 68, 1916, 2395, 2864, 3056, 4207, 4417
SduI GDGCHC 5 cut(s) 1137, 1581, 2742, 3292, 3317
SexAI ACCWGGT 1 cut(s) 4810
Sfr274I CTCGAG 1 cut(s) 24
SinI GGWCC 5 cut(s) 219, 502, 932, 3229, 3350
SlaI CTCGAG 1 cut(s) 24
SmiMI CAYNNNNRTG 6 cut(s) 795, 1647, 1979, 2661, 3689, 5204
SmlI CTYRAG 3 cut(s) 24, 2585, 2591
SmoI CTYRAG 3 cut(s) 24, 2585, 2591
SpeI ACTAGT 2 cut(s) 1559, 4802
SseBI AGGCCT 1 cut(s) 4570
SspI AATATT 2 cut(s) 1780, 2152
SstI GAGCTC 1 cut(s) 3317
StuI AGGCCT 1 cut(s) 4570
StyI CCWWGG 4 cut(s) 1088, 2292, 3224, 4465
TaiI ACGT 6 cut(s) 1824, 1867, 1983, 2789, 3364, 4352
TaqI TCGA 7 cut(s) 25, 126, 393, 2452, 2731, 4374, 4787
TaqII GACCGA 1 cut(s) 3803
TatI WGTACW 4 cut(s) 277, 2482, 4387, 4685
TauI GCSGC 5 cut(s) 245, 1278, 2141, 2599, 4976
TseFI GTSAC 7 cut(s) 19, 979, 1751, 1938, 2787, 2856, 3399
Tsp45I GTSAC 7 cut(s) 19, 979, 1751, 1938, 2787, 2856, 3399
TspGWI ACGGA 2 cut(s) 379, 3253
Tth111I GACNNNGTC 1 cut(s) 2404
Van91I CCANNNNNTGG 3 cut(s) 4316, 4511, 4817
Vha464I CTTAAG 1 cut(s) 2591
VneI GTGCAC 1 cut(s) 3288
VpaK11BI GGWCC 5 cut(s) 219, 502, 932, 3229, 3350
VspI ATTAAT 2 cut(s) 2055, 2639
XceI RCATGY 1 cut(s) 56
XcmI CCANNNNNNNNNTGG 2 cut(s) 229, 5138
XhoI CTCGAG 1 cut(s) 24
XmiI GTMKAC 1 cut(s) 4807
XmnI GAANNNNTTC 4 cut(s) 268, 399, 2203, 2448
ZraI GACGTC 1 cut(s) 2787
ZrmI AGTACT 1 cut(s) 4687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.