Rw5G050360

Nuclear pore complex protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
86918312 .. 86928394
10083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G050360.1

Sequence Viewer

Length: 4815 bp
ATGACTAAGAAAATAGTTGAACTTGAAGAAGAAATTGAAGGAGATATCGTAGAGACAAACGACTACATATTTGATAAGATCGGCGAGGCCGTTCCAATTAAGAGTGATGGTTTCAGTTTCGATCCCCAAAGCAGTCCCTCCCGGCCACTCGCCGTATCGGAGAAACACGGCCTCGTCTTCGTCGCTCATTCATCCGGGTTTCTCGTTGCGAGGACCAAAGATGTTATGGCTTCCGCCGCCGAGATTAAGGAAAAGGGAAGCTCTGCTTCTATACAGGAACTGAGTCTTGTGGATGTTCCCCTCCCCAACCTTCACATTCTCGCACTATCTACCGATAATTCTACTCTTGCGGCTACTGCAGATGCCGACATTCACTTCTTCTCCGTCGGCTCTCTCCTGGATAAGGGTCTAGAACCATCTTATTCTTGCTCACTCAATGAATCCAGCTCTGTCAAGGATATTCAGTGGACAAAAAGTTCTGAAAATATGTATGTGGTTCTTTCAAATCTTGGAAAGCTATACCATGGAACGATTGGTGGCCCTGTGAAGGATCTAATGGACAATGTTGATGCTGTTGAATGGAGTTCAAAAGGAAAATTAATTGCTGTGGCAAGGAAGGATACTCTCAACATTTTATCATCTAACTTCATTGAGAAGTCGTCCATGCTACTTTTGTTCAAGTCCTGGATCGTTGATCCTGACACAAACTGCATCGTAAAAGTGGATACAATCAGGTGGGTTCGCAATGATAGCATCATTTTAGGATGCTTTCAACTCAATGCAGATGGGAATGAAGAAAATTACCTTGTACAAGTAATACAAATCAAAGATGGCAAGTTTACTAATGATTCCTGCAAGCCAGTTGTTCTATCTTTCTATGATTTGTTTTCATGTCTCATTGATGACATTTTGCCGTCTGGAAGTGGACCTTACTTAGTATTGAGCTATCTGGAGGAGTGTGAACTTGCAATAACTGCTAACAGGAAGAATGCGGATCAGCATGTTGTATATCTTAGTTGGTCGCTAGGAGAGGAGAGTAACAAAGCTGTAATTGTTGATATTGTACGAGATAATTTGAAACCAAGAATTGAGCTTCAAGAAAATGGGGATGATAATTTGATTATGGGGCTCTGCGTAGACAAAAGTTCAATAAGCCAGAAAGTTAGTGTCAGACTTGGATTGGAACAGAGAGAACTCTCACCATACTGCATTCTGATTTGTCTTACACTAGACGGAAAGCTAATTATGTACCATGTTGCCAGTGTTAGTGATGTTACAGTTAAGCCTGCTAGTGTTTCTAGTGTTTCTGATGAGGAAGAGGATTCTACTGCATTGGTACCTGTAGGATGTGAACCAGCTAAATTTTCTCCTGAGCTGGGGAAGGAACAATTTGGAAAGCTTGCTACGGATGCTCCTTTGCTTAATAAGAACATAAAGGAACTTGACAGAAAAGTAGGTCTTGATGTCCTTACAAAAGATGACAAGAACTCTCTTAGTGTAAATGAGACTTTGATGCTCAAGGAGAAAGTACCAACATCATTTAAAGGCCAACAAGAACTTATTTTTTCAAAAAATGGTAAACAAGTGCAGCTTCCTGTACTGGAAAATAGAGATATACAACACGCATCTACTGATTCTTTTTCCCAAGACGGGCATAGTTTTGTGTTCAGGGACTTGAGCAAGATAGGCACTCAAGAAAATGCTGTACTTGCAACTAGCAGTGTCTCTTTTGTTGAGACAGGAGTAAAATCTCTAGGAAAAATGGAGTCAGCAGATTTACAGAGGGTTTCATCTCAGTCCTGGTCAAGTGGAAAAATCATAACTTCAAAGGGCACTGATGTGAAATCTCCAACTGTGCCTTCAACTTTTATTCAAGGTAGCAGTTCTGGAACATCAACTACAGTTAACTTCTCTGGTATGCCGGTTGAGAATAGGGGAAGGAGATCATCAGCTGCGGCTGGAAATATTGCATCAGTACCTCCCATTTCTGGCTTCCAGACGTCATCACAGGAAAATTTCTCAATTGGCAAGTCTTTTAACCACAAGATTCATCCATTGAAGGAAAATTACAGTGAACTCCCCCAGTCAAGGATTCCGAACTCTGAACCAAGTTTATCAAAAAAATTTGGCAATATAACGGAGATGACCAAGGAGTTGGATATGTTCCTACAATCAATAGAGGAACCAGGTGGTTTCAGGGATGCCTGCATTGTTAGTCAGAAAAGTTCTGTTGAAGAACTGGAGAGAGAGGTTGGAGTTCTGTCTGAGAGATGCCGAACGTGGAAGAGCACTATGGATGAACGACTTCATGAAGTCCAACATCTTTATGACATGACTGTACAAGTGCTGGCACGGAAAATATACATGGAGGGGATTGTGAAACAAGCTTCTGATAGCCGATATTGGGACTTCTGGAGTTGTCAGAAATTGAATTCAGAACTTGAGCTGAAGAGGCGACATATTTCAAAAATGAATCAGGATTTGACTGATCAATTAATTAAATTGGAAAGGCATTTTAATGGCCTTGAGCTTAACAAATTTGGTGAAAATGATGGAGCTCATGCTGGTCGAAGCGCTTTGCAAAGTCGATTTGGGCATTCAAGGCACATTCAGTCCTTGCATAGTCTACAGAGCACAATGACTTCACAATTAGCTGCAGCCGATCAACTTTCTGACTGTCTATCAAAACAAATGGTGGCACTAAAGATTGAGTCACCTTCTGCAAAACAGAAGAATGTGAAAAAAGAGTTGTTTGAAACTATAGGGATTCCTTATGATGCCTCTTTCAGTTCCCCTTCCCCAGATGTGTCGAAGTTTCGTGGTACTCCAAAAGAGAAACTATCGTTATCTTTGGGTTCATCTGCTGCTAAAGATCAAACCAGGAGAATTGAGAGCGCCATGAAGAATTATGAACCAGAAACTGCAAGGAGGAGGAGAGACTCACTGGATAGGAGCTGGGCAAATTATGAGCCTACAAAAGCCACTGTGAAAAGGTTGCTTTTGCAAGAAAGTGGAAAGGTAAGTGTGAATAGATCATCATTATCGGTTGATAAGCAACGCATTAGCTCTCGCCTGCTGGAGGGATCAACTGTTACTCGTCCATGGGATCACACAATGCCTGCAACATTCTTTCATCCATCTGAAAACAAAGCAGGCATTCAGGATACACACTCAAAACAGGCTTCGGAAACCCCAGCAACTCCATTTGTTTTGCCTAAAGAATCAGTAAGGCAAAATCTTTTGAGGGAAACTAACATGACAGCAGAAAAATCTGGCAAGGGCATAACATCTGTTAAGAAGTCTGAATCAGTTTCTGCAAAGGAAAAGTCTGTTTTGCCATCAGACACTAGTCAGAAACTATCAACTTTTATGGTACCTACACAGCCGTCCTCATTGCTTAAGAAACCCAATGATATGGTAAATTCATATACCAAAGAGAGTGCACGTCCGACAGAACAGAGTGTGAAGGACAGGCCTTTGAACACAACAGTTCCATCTCTGGAATCTGGGAAAAAATATGATTCTCCATTCTCTCCCTCATTTCCTGTTTCTGTGGCCCCTTCTGCCACATTCTCAATGTGTTCATCATCAGCTCTATTGTCTTTATCAAGTCCCTCATCAGCTTCTCCTAACTTGTCCTCTGTGATGCCTTCAAACAGATCGTTGGCTTACTCAAACAATACTGCAGATATGAATAAACCTGTCACAACATCCCCAGTATCAGCTTTTCCCTCTCCAGTTGTTCTGCCTTCTGGTTCTTTCTTACTGAATGTTTCAAAATCACTGGTGCCCTCTGACATTTCGCCTGCGACAAATTCAGCATTAGAATCTCCAAAACAAGAGATTCAACCATCCTCAAAGACCGCCGTGAATTCTAATACTATAGTACCACCAGTGGAATCTGGACCTTCCCCTGTCGAAACTAATTTGAATCTCCAACCTTCAATATTGCCTCCCCTTACAGTTGAAACTTCAACAGGACTAGCACCTGGAAATCAGTCCAGTCTCAGCAATTCTAGTCCTGCACCAGTAGCAGATCCTGGAAGCCAAACCAGTTTGAAGAATACATCAGGTCCTACACTTAATGTGACTGAAGCCTTGGTGTTTGGGCTTGGCTCTTCCCCGAACCCAACTGCTGTTAAACCCAATCCATTTGGTGGAACATTTGGTAATGCAGCAACAAATGTGACAACTTCGCCTTTCCTCATGACTGTTCCTAGTGGAGAGTTGTTTCAGCCTGCATCTCTTAACTTCCAATCTCTACAGCCTTCTCCATCATCTCAGCCAACAAATTCAGGTGCATTTGCTGGTGGGTTTGGCACTGGTACTACCGCCCAATCTTCCAATCCGGGTGGGTTTGGCCAGCCATCACAGGTTGGACCAGGGCAGCAAGCATTAGGATCAGTTCTGGGTGCTTTTGGACAGTCGAGACAGCTTGGTACTGGTCTACCAGGAACTGGTTTTGGATCACCTAGTGGTTTTGGAGGTGCCATTGCTAGCAATAAACCTCCTGGTGGTTTCTCAGGGGGTGGGGGTTTTGGCGGTGCTGCTTCAGGGGGTGGGGGTTTTGGCGGTGCTGCTTCAGGGGCTGGGGGTTTTGTCGGTGCAGCTTCAGGGGCTTCAGGTTTTGGTGGTGCAGCTCCAGGTGGTGGCGGTTTTGCTGGGGCAGCTCCTGCTGGTAGCGGGTTTGCAGGAGCCAATGTGGCAGGTGGTGGATTTAGTGCATTTGGTGGCCAGCAAGGATCTGGTGGTTTCTCTGCTTTTGGTAGTGGAGGAACCGGAAAGCCTCCAGATTTGTTCCAGATGAGAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1604

Amino Acids

170.71

Weight (kDa)

6.21

Isoelectric Point (pI)

53.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 4697
AatII GACGTC 1 cut(s) 2003
Acc36I ACCTGC 1 cut(s) 4697
Acc65I GGTACC 2 cut(s) 1336, 3373
AccB1I GGYRCC 4 cut(s) 1336, 3373, 3787, 4487
AccB7I CCANNNNNTGG 3 cut(s) 4157, 4457, 4649
AccI GTMKAC 3 cut(s) 1137, 2626, 4447
AcoI YGGCCR 3 cut(s) 143, 4360, 4732
AcsI RAATTY 9 cut(s) 1361, 2014, 2123, 2431, 2537, 3421, 3814, 3871, 4291
AcuI CTGAAG 6 cut(s) 2468, 4113, 4536, 4566, 4596, 4605
AcyI GRCGYC 1 cut(s) 2000
AdeI CACNNNGTG 1 cut(s) 4475
AfeI AGCGCT 1 cut(s) 2575
AflII CTTAAG 1 cut(s) 3398
AhlI ACTAGT 1 cut(s) 3347
AjiI CACGTC 1 cut(s) 3446
AjuI GAANNNNNNNTTGG 2 cut(s) 1843, 1875
AleI CACNNNNGTG 1 cut(s) 1838
AloI GAACNNNNNNTCC 2 cut(s) 460, 492
Alw21I GWGCWC 4 cut(s) 2291, 2560, 2636, 3445
Alw26I GTCTC 8 cut(s) 47, 899, 1499, 1729, 1730, 2931, 4010, 4423
Alw44I GTGCAC 1 cut(s) 3441
AlwNI CAGNNNCTG 7 cut(s) 280, 2921, 3314, 4040, 4457, 4589, 4673
Aor51HI AGCGCT 1 cut(s) 2575
ApaLI GTGCAC 1 cut(s) 3441
ApoI RAATTY 9 cut(s) 1361, 2014, 2123, 2431, 2537, 3421, 3814, 3871, 4291
ArsI GACNNNNNNTTYG 4 cut(s) 53, 85, 3311, 3343
AseI ATTAAT 2 cut(s) 599, 2495
Asp700I GAANNNNTTC 1 cut(s) 2304
Asp718I GGTACC 2 cut(s) 1336, 3373
AspLEI GCGC 2 cut(s) 2576, 2897
AspS9I GGNCC 7 cut(s) 213, 539, 926, 3556, 3905, 4073, 4379
AsuC2I CCSGG 3 cut(s) 142, 196, 4350
AsuHPI GGTGA 4 cut(s) 1191, 2555, 2706, 4461
AsuNHI GCTAGC 1 cut(s) 4496
AvaII GGWCC 5 cut(s) 213, 926, 3905, 4073, 4379
BaeGI GKGCMC 3 cut(s) 1835, 3445, 3792
BaeI ACNNNNGTAYC 2 cut(s) 3870, 3903
BalI TGGCCA 2 cut(s) 4362, 4734
BanI GGYRCC 4 cut(s) 1336, 3373, 3787, 4487
BanII GRGCYC 2 cut(s) 1131, 2560
BarI GAAGNNNNNNTAC 2 cut(s) 2051, 2083
BbsI GAAGAC 1 cut(s) 169
Bbv12I GWGCWC 4 cut(s) 2291, 2560, 2636, 3445
BceAI ACGGC 6 cut(s) 74, 137, 184, 898, 3370, 3851
BciVI GTATCC 3 cut(s) 613, 718, 3157
BclI TGATCA 1 cut(s) 2488
BcnI CCSGG 3 cut(s) 142, 196, 4350
BcoDI GTCTC 8 cut(s) 47, 899, 1499, 1729, 1730, 2931, 4010, 4423
BcuI ACTAGT 1 cut(s) 3347
BfmI CTRYAG 9 cut(s) 357, 1341, 1899, 2627, 2655, 2760, 3684, 3882, 4262
BfoI RGCGCY 2 cut(s) 2577, 2898
BfrI CTTAAG 1 cut(s) 3398
BfuAI ACCTGC 1 cut(s) 4697
BfuI GTATCC 3 cut(s) 613, 718, 3157
BglI GCCNNNNNGGC 1 cut(s) 4703
Bme18I GGWCC 5 cut(s) 213, 926, 3905, 4073, 4379
BmgBI CACGTC 1 cut(s) 3446
BmgT120I GGNCC 7 cut(s) 213, 539, 926, 3556, 3905, 4073, 4379
BmiI GGNNCC 8 cut(s) 1338, 2184, 3375, 3558, 3789, 4489, 4696, 4777
BmrI ACTGGG 2 cut(s) 2077, 3710
BmtI GCTAGC 1 cut(s) 4500
BmuI ACTGGG 2 cut(s) 2077, 3710
BoxI GACNNNNGTC 1 cut(s) 3348
BpiI GAAGAC 1 cut(s) 169
BpmI CTGGAG 7 cut(s) 971, 2261, 2434, 3098, 3720, 4626, 4773
Bpu10I CCTNAGC 1 cut(s) 1371
BpuEI CTTGAG 5 cut(s) 1502, 1677, 1696, 2462, 2546
BpuMI CCSGG 3 cut(s) 142, 196, 4350
BsaHI GRCGYC 1 cut(s) 2000
BsaJI CCNNGG 5 cut(s) 523, 2148, 3101, 4098, 4382
BsaWI WCCGGW 1 cut(s) 4778
BsaXI ACNNNNNCTCC 8 cut(s) 33, 63, 365, 395, 1396, 1426, 4686, 4716
Bse118I RCCGGY 1 cut(s) 1921
Bse3DI GCAATG 3 cut(s) 751, 3392, 4491
BseDI CCNNGG 5 cut(s) 523, 2148, 3101, 4098, 4382
BseMI GCAATG 3 cut(s) 751, 3392, 4491
BseMII CTCAG 7 cut(s) 272, 1362, 1808, 2256, 4021, 4295, 4536
BseRI GAGGAG 4 cut(s) 968, 1046, 2944, 2947
BseSI GKGCMC 3 cut(s) 1835, 3445, 3792
BseYI CCCAGC 5 cut(s) 1375, 2955, 3193, 4589, 4661
BsgI GTGCAG 4 cut(s) 1607, 4008, 4626, 4656
BshNI GGYRCC 4 cut(s) 1336, 3373, 3787, 4487
BsiHKAI GWGCWC 4 cut(s) 2291, 2560, 2636, 3445
BsiSI CCGG 5 cut(s) 142, 195, 1922, 4349, 4779
BslFI GGGAC 4 cut(s) 120, 1685, 2420, 3597
BsmAI GTCTC 8 cut(s) 47, 899, 1499, 1729, 1730, 2931, 4010, 4423
BsmFI GGGAC 4 cut(s) 120, 1685, 2420, 3597
BsmI GAATGC 4 cut(s) 994, 1209, 2596, 3156
Bsp1286I GDGCHC 7 cut(s) 1131, 1835, 2291, 2560, 2636, 3445, 3792
Bsp1407I TGTACA 2 cut(s) 808, 2338
Bsp19I CCATGG 2 cut(s) 523, 3101
BspCNI CTCAG 7 cut(s) 273, 1363, 1807, 2257, 4020, 4294, 4535
BspHI TCATGA 2 cut(s) 2308, 4206
BspLI GGNNCC 8 cut(s) 1338, 2184, 3375, 3558, 3789, 4489, 4696, 4777
BspMAI CTGCAG 3 cut(s) 361, 2659, 3688
BspMI ACCTGC 1 cut(s) 4697
BspOI GCTAGC 1 cut(s) 4500
BspQI GCTCTTC 2 cut(s) 2279, 4123
BspT107I GGYRCC 4 cut(s) 1336, 3373, 3787, 4487
BspTI CTTAAG 1 cut(s) 3398
BsrDI GCAATG 3 cut(s) 751, 3392, 4491
BsrFI RCCGGY 1 cut(s) 1921
BsrGI TGTACA 2 cut(s) 808, 2338
BssAI RCCGGY 1 cut(s) 1921
BssECI CCNNGG 5 cut(s) 523, 2148, 3101, 4098, 4382
BssNI GRCGYC 1 cut(s) 2000
BssT1I CCWWGG 4 cut(s) 523, 2148, 3101, 4098
Bst6I CTCTTC 4 cut(s) 1311, 2279, 2444, 4123
BstACI GRCGYC 1 cut(s) 2000
BstAFI CTTAAG 1 cut(s) 3398
BstAPI GCANNNNNTGC 2 cut(s) 974, 4673
BstAUI TGTACA 2 cut(s) 808, 2338
BstDSI CCRYGG 2 cut(s) 523, 3101
BstENI CCTNNNNNAGG 2 cut(s) 401, 3077
BstH2I RGCGCY 2 cut(s) 2577, 2898
BstHHI GCGC 2 cut(s) 2576, 2897
BstMAI GTCTC 8 cut(s) 47, 899, 1499, 1729, 1730, 2931, 4010, 4423
BstNSI RCATGY 1 cut(s) 1004
BstPAI GACNNNNGTC 1 cut(s) 3348
BstSFI CTRYAG 9 cut(s) 357, 1341, 1899, 2627, 2655, 2760, 3684, 3882, 4262
BstSLI GKGCMC 3 cut(s) 1835, 3445, 3792
BstV2I GAAGAC 1 cut(s) 169
BstX2I RGATCY 3 cut(s) 550, 4036, 4742
BstXI CCANNNNNNTGG 2 cut(s) 2155, 3415
BstYI RGATCY 3 cut(s) 550, 4036, 4742
BsuI GTATCC 3 cut(s) 613, 718, 3157
BtgI CCRYGG 2 cut(s) 523, 3101
BtrI CACGTC 1 cut(s) 3446
BtsI GCAGTG 1 cut(s) 1726
BveI ACCTGC 1 cut(s) 4697
CaiI CAGNNNCTG 7 cut(s) 280, 2921, 3314, 4040, 4457, 4589, 4673
CciI TCATGA 2 cut(s) 2308, 4206
CfoI GCGC 2 cut(s) 2576, 2897
Cfr10I RCCGGY 1 cut(s) 1921
Cfr13I GGNCC 7 cut(s) 213, 539, 926, 3556, 3905, 4073, 4379
CsiI ACCWGGT 1 cut(s) 2185
CspCI CAANNNNNGTGG 2 cut(s) 4333, 4368
DraI TTTAAA 1 cut(s) 1543
DraIII CACNNNGTG 1 cut(s) 4475
EaeI YGGCCR 3 cut(s) 143, 4360, 4732
Eam1104I CTCTTC 4 cut(s) 1311, 2279, 2444, 4123
EarI CTCTTC 4 cut(s) 1311, 2279, 2444, 4123
EciI GGCGGA 1 cut(s) 223
Ecl136II GAGCTC 1 cut(s) 2558
Eco130I CCWWGG 4 cut(s) 523, 2148, 3101, 4098
Eco147I AGGCCT 1 cut(s) 3475
Eco24I GRGCYC 2 cut(s) 1131, 2560
Eco32I GATATC 1 cut(s) 46
Eco47I GGWCC 5 cut(s) 213, 926, 3905, 4073, 4379
Eco47III AGCGCT 1 cut(s) 2575
Eco53kI GAGCTC 1 cut(s) 2558
Eco57I CTGAAG 6 cut(s) 2468, 4113, 4536, 4566, 4596, 4605
EcoICRI GAGCTC 1 cut(s) 2558
EcoNI CCTNNNNNAGG 2 cut(s) 401, 3077
EcoO109I RGGNCCY 1 cut(s) 4073
EcoRI GAATTC 2 cut(s) 2431, 3871
EcoRV GATATC 1 cut(s) 46
EcoT14I CCWWGG 4 cut(s) 523, 2148, 3101, 4098
EcoT38I GRGCYC 2 cut(s) 1131, 2560
ErhI CCWWGG 4 cut(s) 523, 2148, 3101, 4098
FalI AAGNNNNNCTT 8 cut(s) 250, 282, 913, 945, 1443, 1475, 1575, 1607
FaqI GGGAC 4 cut(s) 120, 1685, 2420, 3597
FauI CCCGC 1 cut(s) 4676
FbaI TGATCA 1 cut(s) 2488
FblI GTMKAC 3 cut(s) 1137, 2626, 4447
FriOI GRGCYC 2 cut(s) 1131, 2560
GlaI GCGC 2 cut(s) 2575, 2896
GsaI CCCAGC 5 cut(s) 1379, 2959, 3197, 4593, 4665
GsuI CTGGAG 7 cut(s) 971, 2261, 2434, 3098, 3720, 4626, 4773
HaeII RGCGCY 2 cut(s) 2577, 2898
HapII CCGG 5 cut(s) 142, 195, 1922, 4349, 4779
HhaI GCGC 2 cut(s) 2576, 2897
Hin1I GRCGYC 1 cut(s) 2000
Hin6I GCGC 2 cut(s) 2574, 2895
HinP1I GCGC 2 cut(s) 2574, 2895
HincII GTYRAC 1 cut(s) 1906
HindII GTYRAC 1 cut(s) 1906
HindIII AAGCTT 2 cut(s) 1397, 2385
HpaI GTTAAC 1 cut(s) 1906
HpaII CCGG 5 cut(s) 142, 195, 1922, 4349, 4779
HphI GGTGA 4 cut(s) 1191, 2555, 2706, 4461
Hpy99I CGWCG 2 cut(s) 185, 389
HpyCH4IV ACGT 3 cut(s) 2000, 2279, 3445
HpySE526I ACGT 3 cut(s) 2000, 2279, 3445
Hsp92I GRCGYC 1 cut(s) 2000
HspAI GCGC 2 cut(s) 2574, 2895
KpnI GGTACC 2 cut(s) 1340, 3377
Ksp22I TGATCA 1 cut(s) 2488
KspAI GTTAAC 1 cut(s) 1906
LguI GCTCTTC 2 cut(s) 2279, 4123
LmnI GCTCC 6 cut(s) 1417, 2555, 2952, 4645, 4675, 4694
MabI ACCWGGT 1 cut(s) 2185
MaeII ACGT 3 cut(s) 2000, 2279, 3445
MaeIII GTNAC 7 cut(s) 1037, 1273, 2712, 3091, 3703, 4087, 4186
MfeI CAATTG 1 cut(s) 2022
MflI RGATCY 3 cut(s) 550, 4036, 4742
MhlI GDGCHC 7 cut(s) 1131, 1835, 2291, 2560, 2636, 3445, 3792
MlsI TGGCCA 2 cut(s) 4362, 4734
MluNI TGGCCA 2 cut(s) 4362, 4734
MlyI GAGTC 4 cut(s) 292, 1775, 2720, 2933
MmeI TCCRAC 7 cut(s) 1874, 2136, 2233, 2341, 3473, 3961, 4357
Mox20I TGGCCA 2 cut(s) 4362, 4734
MroXI GAANNNNTTC 1 cut(s) 2304
MscI TGGCCA 2 cut(s) 4362, 4734
MslI CAYNNNNRTG 3 cut(s) 1838, 2325, 2517
Msp20I TGGCCA 2 cut(s) 4362, 4734
MspA1I CMGCKG 1 cut(s) 1952
MspCI CTTAAG 1 cut(s) 3398
MspI CCGG 5 cut(s) 142, 195, 1922, 4349, 4779
MunI CAATTG 1 cut(s) 2022
Mva1269I GAATGC 4 cut(s) 994, 1209, 2596, 3156
NciI CCSGG 3 cut(s) 142, 196, 4350
NcoI CCATGG 2 cut(s) 523, 3101
NheI GCTAGC 1 cut(s) 4496
NlaIV GGNNCC 8 cut(s) 1338, 2184, 3375, 3558, 3789, 4489, 4696, 4777
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 4 cut(s) 2712, 3703, 4087, 4186
NspI RCATGY 1 cut(s) 1004
OliI CACNNNNGTG 1 cut(s) 1838
PacI TTAATTAA 1 cut(s) 2499
PagI TCATGA 2 cut(s) 2308, 4206
PaqCI CACCTGC 1 cut(s) 4697
PceI AGGCCT 1 cut(s) 3475
PciSI GCTCTTC 2 cut(s) 2279, 4123
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 4 cut(s) 994, 1209, 2596, 3156
PdmI GAANNNNTTC 1 cut(s) 2304
PflMI CCANNNNNTGG 3 cut(s) 4157, 4457, 4649
PfoI TCCNGGA 3 cut(s) 396, 683, 4039
PleI GAGTC 4 cut(s) 291, 1774, 2719, 2933
PpsI GAGTC 4 cut(s) 291, 1774, 2719, 2933
PpuMI RGGWCCY 1 cut(s) 4073
PshAI GACNNNNGTC 1 cut(s) 3348
PshBI ATTAAT 2 cut(s) 599, 2495
Psp124BI GAGCTC 1 cut(s) 2560
Psp5II RGGWCCY 1 cut(s) 4073
PspFI CCCAGC 5 cut(s) 1375, 2955, 3193, 4589, 4661
PspN4I GGNNCC 8 cut(s) 1338, 2184, 3375, 3558, 3789, 4489, 4696, 4777
PspPI GGNCC 7 cut(s) 213, 539, 926, 3556, 3905, 4073, 4379
PspPPI RGGWCCY 1 cut(s) 4073
PsrI GAACNNNNNNTAC 2 cut(s) 1882, 1914
PstI CTGCAG 3 cut(s) 361, 2659, 3688
PstNI CAGNNNCTG 7 cut(s) 280, 2921, 3314, 4040, 4457, 4589, 4673
PsuI RGATCY 3 cut(s) 550, 4036, 4742
PvuII CAGCTG 1 cut(s) 1952
RseI CAYNNNNRTG 3 cut(s) 1838, 2325, 2517
SacI GAGCTC 1 cut(s) 2560
SapI GCTCTTC 2 cut(s) 2279, 4123
Sau96I GGNCC 7 cut(s) 213, 539, 926, 3556, 3905, 4073, 4379
SchI GAGTC 4 cut(s) 292, 1775, 2720, 2933
SduI GDGCHC 7 cut(s) 1131, 1835, 2291, 2560, 2636, 3445, 3792
SexAI ACCWGGT 1 cut(s) 2185
SfcI CTRYAG 9 cut(s) 357, 1341, 1899, 2627, 2655, 2760, 3684, 3882, 4262
SinI GGWCC 5 cut(s) 213, 926, 3905, 4073, 4379
SmiMI CAYNNNNRTG 3 cut(s) 1838, 2325, 2517
SmlI CTYRAG 6 cut(s) 1517, 1675, 1692, 2441, 2525, 3398
SmoI CTYRAG 6 cut(s) 1517, 1675, 1692, 2441, 2525, 3398
SpeI ACTAGT 1 cut(s) 3347
SseBI AGGCCT 1 cut(s) 3475
SspI AATATT 2 cut(s) 1966, 3948
SstI GAGCTC 1 cut(s) 2560
StuI AGGCCT 1 cut(s) 3475
StyI CCWWGG 4 cut(s) 523, 2148, 3101, 4098
TaiI ACGT 3 cut(s) 2003, 2282, 3448
TaqI TCGA 6 cut(s) 120, 2569, 2587, 2810, 3918, 4427
TatI WGTACW 4 cut(s) 808, 1597, 1705, 2338
TauI GCSGC 3 cut(s) 239, 353, 1958
TseFI GTSAC 4 cut(s) 2712, 3703, 4087, 4186
Tsp45I GTSAC 4 cut(s) 2712, 3703, 4087, 4186
TspGWI ACGGA 5 cut(s) 373, 1248, 1421, 2153, 2368
Van91I CCANNNNNTGG 3 cut(s) 4157, 4457, 4649
Vha464I CTTAAG 1 cut(s) 3398
VneI GTGCAC 1 cut(s) 3441
VpaK11BI GGWCC 5 cut(s) 213, 926, 3905, 4073, 4379
VspI ATTAAT 2 cut(s) 599, 2495
XagI CCTNNNNNAGG 2 cut(s) 401, 3077
XapI RAATTY 9 cut(s) 1361, 2014, 2123, 2431, 2537, 3421, 3814, 3871, 4291
XbaI TCTAGA 1 cut(s) 409
XceI RCATGY 1 cut(s) 1004
XcmI CCANNNNNNNNNTGG 3 cut(s) 223, 530, 4742
XmiI GTMKAC 3 cut(s) 1137, 2626, 4447
XmnI GAANNNNTTC 1 cut(s) 2304
ZraI GACGTC 1 cut(s) 2001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.