RchiOBHm_Chr5g0084071

Nuclear pore complex protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
89684755 .. 89695918
11164 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35817

Sequence Viewer

Length: 5160 bp
ATGACTAAGAAAATAGTTGAACTTGAAGAAGAAATTGCAGGAGATATCGTAGAGACAAACGACTACATATTTGATAAGATCGGCGAGGCCGTTCCAATTAAGAGTGATGGTTTCAGTTTCGATCCCCAAAGCAGTCCCTCCCGGCCACTCGCCGTATCGGCGAAACACGGCCTCGTCTTCGTCGCTCATTCATCCGGGTTTCTCGTTGCGAGGACCAAAGATGTTATGGCTTCCGCCGCCGAGATTAAGGAAAAGGGAAGCTCTGCTTCTATACAGGAACTGAGTCTTGTGGATGTTCCCCTCCCCAACCTTCACATTCTCGCACTATCTACCGATAATTCTACTCTTGCAGCTACTGCAGATGCCGACATTCACTTCTTCTCCGTCGGCTCTCTCCTGGATAAGGGTCTAGAACCATCTTATTCTTGCTCACTCAATGAATCCAGCTCTGTCAAGGATATTCAGTGGACAAAAAGTTCTGAAAATATGTATGTGGTTCTTTCAAATCTTGGAAAGCTATACCATGGAACGATTGGTGGCCCTGTGAAGGATCTAATGGACAATGTTGATGCTGTTGAATGGAGTTCAAAAGGAAAATTAATTGCTGTGGCAAGGAAGGATACTCTCAACATTTTATCATCTAAGTTCATTGAGAAGTCGTCTATGCTACTTTCGTTCAAGTCCTGGATCGGTGATCCTGACACAAACTGCATCGTAAAAGTGGATACAATCAGGTGGGTTCGCAATGATAGCATCATTTTAGGATGCTTTCAACTGAATGCAGATGGGAATGAAGAAAATTACCTTGTACAAGTAATACAAATCAAAGAGGGCAAGTTTACTAATGATTCCTGCAAGCCAGTTGTTATATCTTTCTATGATTTGTTTTCATGTCTCATTGATGACATTTTGCCGTCTGGAAGTGGACCTTACTTAGTATTGAGCTATCTGGAGGAGTGTGAACTTGCAATAACTGCTAACAGGAAGAATGCGGATCAGCATGTTGTATATCTTAGTTGGTCGCTAGGAGAGGAGAGTAACGAAGCTGTAATTGTTGATATTGTACGAGATAATTTGAAACCAAGAATTGAGCTTCAAGAAAATGGTGATGATAATTTGATTATGGGGCTCTGCGTAGACAAAAGTTCAATAAGCCAGAAAGTTAGTGTCAGACTTGGATTGGAACAGAGAGAACTCTCACCATACTGCATTCTGATTTGTCTTACACTATGCGGAAAGCTAATTATGTACCATGTTGCCAGTGCTAGTGATGTTACTGTTAAGCCTGCTAGTGTTTCTAGTGTTTCTGATGAGGAAGAGGATTCTACTGCATTGGTACCTGTAGGATGTGAACCAGCTAAATTTTCTTCTGAGCTGGGGAAGGAACAATTTGGAAAGCTTGCTACGGATGTTCCTTTGCTTAATAAGAACATAAAGGAACTTGACAGAAAAGTAGGTCTTGATGTCCTTACAAAAGATGACAAGAACTCTCTTAGTGTAAATGAGAATTCGATGCTCAAGGAAGAAAGTACCAACAGTAACAAGAAAGTGGAGTTTTCAACAAGTTCTCAGTCAATTAAAGGCCAACAAGAACTTATTTTTTCGAAAAATGGTAAACAAGTGCAGCTTCCTGTACTGGAAAATAGAGATATACAACACGCATCTACTGATTCTTTTTCCCAAGACGGGCATAGTCTTGTGTTCAGGGACTTGAGCAAGATAGGAACTCAAGAAAATGCTGTACTTGCAACTAGCAGTGTCTCTTTTGTTGAGACAGGAGTAAAATCTCTAGGAAAAATGGAGTCAGCAGATTTACAGAGGGTTTCATCTCAGTCCTGGTCAACTGGAAAAATCATAACTTCAAAGGGCACTGATGTGAAATCTCCAACTGTGCCTTCAACTTTTATTCAAGGTAGCAGTTCTGGAACATCAACTACCGTTAACTTTTCTGGTATGCCGGTTGAGAATAGGGGAAGGAGATCATCAGCTGCGGCTGGAAATATTGCATCAGTACCTCCCATTTCTGGCTTCCAGACGTCATCACAGGAAAATTTCTCAATTGGCAAGTCTTTTAACCACAAGATTCATCCATTGAAGGAAAATTACAGTGAACTCCCCCAGTCAAGGATGCCGAACTCTGAACCAAGTTTATCAAAAAAATTTGGCAATGCTATAACGGAGATGACCAAGGAGTTGGATATGTTCCTACAATCTATAGAGGAACCAGGTGGTTTCAGGGATGCCTGCATTGTTAGTCAGAAAAGTTCTGTTGAAGAACTGGAGAGAGAGGTTGGAGTTCTGTCTGAGAGATGCCGAACGTGGAAGAGCACTATGGATGAACGATTTCATGAAGTCCAACATCTTTTTGACATGACTGTACAAGTGCTGGCACGGAAAATATACATGGAGGGGATTGTGAAACAAGCTTCTGATAGCCGATATTGGGACTTCTGGAGTTGTCAGAAATTGAATTCGGAACTTGAGCTGAAGAGGCGGCATATTTCAAAAATGAATCAGGATTTGACTGATCAATTAATTAAATTGGAAAGGCATTTTAATGGCCTTGAGCTTAACAAATTTGGTGAAAATGATGGAGCTCATGCTGGTCGAAGCGCTTTGCAAAGTCGATTTGGGCATTCAAGGCACATTCAGTCCTTGCATAGTCTACATAGCACAATGACTTCGCAATTAGCTGCAGCAGATCAACTTTCTGACCGTCTATCAAAACAAATGGTGGCACTAAAGATTGAGTCACCTTCTGCAAAACAGAAGAATGTGAAAAAAGAGTTGTTTGAAACTATAGGGATTCCTTATGATGCCTCTTTCAGTTCCCCTTCCCCAGATGTGTCGAAGTTTCGTGGTACTCCAAAAGAGAAACTATCGTTATCTTTGGGTTCATCTGCTGCTAAAGATCAAAGCAGGAGAAATGAGAGCGCCATGAAGAATTATGAACCAGAAACTGCAAGGAGGAGGAGAGACTCACTGGATAGGAGCTGGGCAAATTATGAGCCTACAAAAGCCACTGTGAAAAGGTTGCTTTTGCAAGAAAGTGGAAAGGTAAGTGTGAATAGATCATCATTATCGGTTGATAAGCAACGCATTAGCTCTCACCTAGTGGAGGGATCAACCGTTACTCATCCATGGGATCACACAATGCCTGCAACATTCTTTCATCCATCTGAAAACAAAGGCATTCAGGATACACACTCAAAACAGGCTTCGGAAACCCCAGCAACTCCATTCGTTTTGCCTAAAGAATCAGTAAGGCAAAATCTTTTGAGGGAAACTAACATGACAGCAGAAAAATCTGGCGAGGGCATAACATCTGTTAAGAAGTCTGAATCAATTTCTGCAAAGGAAAAGTCTGTTTTGCCATCAGACACTAGTCAGAAACTATCAACTTTTATGGTACCTACACAGCCGTCCTCATTGCTTAAGAAACCCAATGATATGGTAAATTCATATACCAAAGAGAGCGCACGTCCAGCAGAACAGAGTGTGAAGGACAGGCCTTTGAACACAACAGTTCCATCTCTGGAATCTGGGAAAAAATATAATTCTCCATTCTCTCCCTCATTTCCTGTTTCTGTGGCCCCTTCTGCCACATTGTCAATGTCAGTTTCAGCATCCACATCTTCAATAATTAGTTCATCATCAGCTCTATTGTCTTTATCAAGTCCCTCATCAGCTTCTCCTAACTTGTCCTCTGTGATGCCTTCAAACGGATCGTTGGCTTACTCAAACAATACTGCAGATATGAATAAACCTGTCACAACATCCCCAGTATCAGCTTTTCCCTCTCCAGTTGTTCTGCCTTCTGGTTCTTTCTTACTGAATGTTTCAAAATCACTGGTGCCCTCTGACATTTCGCCTGCGACAAATTCAGCATTAGAATCTCCAAAACAAGAGATTCAACCTTCCTCAAAGACCGCCGTGAATTCTAATACTATAGTACCACCAGTGGAATCTGGACCTTCCCCTGTTGAAACTAATTTGAATCTCAAACCTTCAATATTGCCTCCCCTTACAGTTGAAACTTCAACAGGACTGGCACCTGGAAATCAGTCCAGTCTCAGCAATTCTAGCCCTGCACCAGTAGCAGATCCTGGAAGCCAAACCAGTTTGAAGAATACATCAGGTCCTACACTTAATGTGACTGTAAATGCTCAGCATGAACAGACATCTGCTGGACAATCCCTCTCAAATTCAGGGAGTGTTAATAGTAGGACTGTAGATGTCCAGAATGCCCAGGAGGATGACATGGATGAAGAGGCTCCTGACACAAGTAGCGCAGCTGGACTTAATTTAGGAAGCCTTGGTGCATTTGGGCTTGGCTCTTCCCCGAACCCAACTGCTGTTAAACCCAATCCATTTGGTGGAACATTTGGTAATGCAGCAACAAATGTGACAACTTCGCCTTTCCTCATGACTGTTCCTAGTGGAGAGTTGTTTCAGCCTGCATCTCTTAACTTCCAATCTCTACAGCCTTCTCCATCATCTCAGCCAACAAATTCAGGTGCATTTGCTGGTGGGTTTGGCACTGGTACTACCGCCCAATCTTCCAATGCGAGTGGGTTTGGCCAGCCATCACAGGTTGGACCAGGGCAGCAAGCATTAGGATCAGTTCTGGGTGCTTTTGGACAGTCGAGACAGCTTGGTACTGGTCTACCAGGAACTGGTTTTGGATCACCTGGTGGTTTTGGAGGTGCCGTTGCTAGCAATAAACCTCCCGGTGGTTTCTCAGGTGCTGCTACCGGAGGATTTGCGGCTGTGGCTTCTGGTGGTGGTGGATTTGCTGCTTTGGCTTCAGGGGGTGGGGGTTTTGGCGGTGCTGCTTCAGGGGTTGGGGGTTTTGGCGGTGCTGCTTTAGGGGTTGGGGGTTTTGGCGGTGCTGCTTCAGGGGCTGGGGGTTTTGGCGGTGCAGCTTCAGGGGCTGGGGGTTTTGGCGGTGCAGCTTCAGGGGCTTCAGGTTTTGGTGGTGCAGCTCCAGGTGGTGGCGGTTTTGCAGGGGCAGCTCCTGCTGGTGGCGGTTTTGCAGGAGCCAATGTGGCAGGTGGTGGATTTAGTGTATTTGGTGGCCAGCAAGGATCTGGTGGTTTCTCTGCTTTTGGTAGTGGAGGAACCGGAAAGCCTCCAGATTTGTTCCAGATGAGAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1719

Amino Acids

180.96

Weight (kDa)

5.92

Isoelectric Point (pI)

50.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 5042
AatII GACGTC 1 cut(s) 2039
Acc36I ACCTGC 1 cut(s) 5042
Acc65I GGTACC 2 cut(s) 1336, 3409
AccB1I GGYRCC 5 cut(s) 1336, 3409, 3853, 4051, 4706
AccB7I CCANNNNNTGG 3 cut(s) 4376, 4676, 4994
AccI GTMKAC 3 cut(s) 1137, 2665, 4666
AcoI YGGCCR 3 cut(s) 143, 4579, 5077
AcuI CTGAAG 7 cut(s) 2507, 4791, 4821, 4881, 4911, 4941, 4950
AcyI GRCGYC 1 cut(s) 2036
AdeI CACNNNGTG 2 cut(s) 3115, 4694
AfeI AGCGCT 1 cut(s) 2614
AflII CTTAAG 1 cut(s) 3434
AhlI ACTAGT 1 cut(s) 3383
AjiI CACGTC 1 cut(s) 3482
AjuI GAANNNNNNNTTGG 2 cut(s) 1879, 1911
AleI CACNNNNGTG 1 cut(s) 1874
AloI GAACNNNNNNTCC 2 cut(s) 460, 492
Alw21I GWGCWC 2 cut(s) 2330, 2599
Alw26I GTCTC 7 cut(s) 47, 899, 1765, 1766, 2970, 4076, 4642
AlwNI CAGNNNCTG 9 cut(s) 280, 356, 2960, 4106, 4676, 4748, 4904, 4934, 5018
Aor51HI AGCGCT 1 cut(s) 2614
ArsI GACNNNNNNTTYG 4 cut(s) 53, 85, 3347, 3379
AseI ATTAAT 2 cut(s) 599, 2534
Asp700I GAANNNNTTC 1 cut(s) 2343
Asp718I GGTACC 2 cut(s) 1336, 3409
AspLEI GCGC 4 cut(s) 2615, 2936, 3479, 4292
AspS9I GGNCC 7 cut(s) 213, 539, 926, 3592, 3971, 4139, 4598
AsuC2I CCSGG 3 cut(s) 142, 196, 4731
AsuHPI GGTGA 7 cut(s) 704, 1118, 1191, 2594, 2745, 3101, 4680
AsuII TTCGAA 1 cut(s) 1604
AsuNHI GCTAGC 1 cut(s) 4715
AvaII GGWCC 5 cut(s) 213, 926, 3971, 4139, 4598
BaeGI GKGCMC 2 cut(s) 1871, 3858
BaeI ACNNNNGTAYC 2 cut(s) 3936, 3969
BalI TGGCCA 2 cut(s) 4581, 5079
BanI GGYRCC 5 cut(s) 1336, 3409, 3853, 4051, 4706
BanII GRGCYC 2 cut(s) 1131, 2599
BarI GAAGNNNNNNTAC 2 cut(s) 2087, 2119
BbsI GAAGAC 1 cut(s) 169
Bbv12I GWGCWC 2 cut(s) 2330, 2599
BccI CCATC 9 cut(s) 101, 424, 779, 2585, 3184, 3382, 3538, 4501, 4594
BceAI ACGGC 7 cut(s) 74, 137, 184, 898, 3406, 3917, 4694
BciVI GTATCC 3 cut(s) 613, 718, 3193
BclI TGATCA 1 cut(s) 2527
BcnI CCSGG 3 cut(s) 142, 196, 4731
BcoDI GTCTC 7 cut(s) 47, 899, 1765, 1766, 2970, 4076, 4642
BcuI ACTAGT 1 cut(s) 3383
BfmI CTRYAG 9 cut(s) 357, 1341, 2214, 2694, 2799, 3750, 3948, 4230, 4481
BfoI RGCGCY 2 cut(s) 2616, 2937
BfrI CTTAAG 1 cut(s) 3434
BfuAI ACCTGC 1 cut(s) 5042
BfuI GTATCC 3 cut(s) 613, 718, 3193
BglI GCCNNNNNGGC 2 cut(s) 158, 5048
BlpI GCTNAGC 1 cut(s) 4167
Bme18I GGWCC 5 cut(s) 213, 926, 3971, 4139, 4598
BmgBI CACGTC 1 cut(s) 3482
BmgT120I GGNCC 7 cut(s) 213, 539, 926, 3592, 3971, 4139, 4598
BmrI ACTGGG 2 cut(s) 2113, 3776
BmtI GCTAGC 1 cut(s) 4719
BmuI ACTGGG 2 cut(s) 2113, 3776
BoxI GACNNNNGTC 1 cut(s) 3384
BpiI GAAGAC 1 cut(s) 169
BpmI CTGGAG 6 cut(s) 971, 2300, 2473, 3786, 4971, 5118
Bpu1102I GCTNAGC 1 cut(s) 4167
Bpu14I TTCGAA 1 cut(s) 1604
BpuEI CTTGAG 5 cut(s) 1502, 1713, 1732, 2501, 2585
BpuMI CCSGG 3 cut(s) 142, 196, 4731
BsaHI GRCGYC 1 cut(s) 2036
BsaJI CCNNGG 6 cut(s) 523, 2187, 3140, 4248, 4315, 4601
BsaWI WCCGGW 2 cut(s) 4754, 5123
BsaXI ACNNNNNCTCC 8 cut(s) 33, 63, 365, 395, 4695, 4725, 5031, 5061
Bse118I RCCGGY 1 cut(s) 1957
Bse3DI GCAATG 3 cut(s) 751, 2173, 3428
BseDI CCNNGG 6 cut(s) 523, 2187, 3140, 4248, 4315, 4601
BseMI GCAATG 3 cut(s) 751, 2173, 3428
BseMII CTCAG 9 cut(s) 272, 1362, 1583, 1844, 2295, 4087, 4181, 4514, 4755
BseRI GAGGAG 4 cut(s) 968, 1046, 2983, 2986
BseSI GKGCMC 2 cut(s) 1871, 3858
BseYI CCCAGC 5 cut(s) 1375, 2994, 3229, 4904, 4934
BsgI GTGCAG 5 cut(s) 1643, 4074, 4941, 4971, 5001
BshNI GGYRCC 5 cut(s) 1336, 3409, 3853, 4051, 4706
BsiHKAI GWGCWC 2 cut(s) 2330, 2599
BsiSI CCGG 6 cut(s) 142, 195, 1958, 4731, 4755, 5124
BslFI GGGAC 4 cut(s) 120, 1721, 2459, 3663
BsmAI GTCTC 7 cut(s) 47, 899, 1765, 1766, 2970, 4076, 4642
BsmFI GGGAC 4 cut(s) 120, 1721, 2459, 3663
BsmI GAATGC 6 cut(s) 784, 994, 1209, 2635, 3192, 4249
Bsp119I TTCGAA 1 cut(s) 1604
Bsp1286I GDGCHC 5 cut(s) 1131, 1871, 2330, 2599, 3858
Bsp1407I TGTACA 2 cut(s) 808, 2377
Bsp1720I GCTNAGC 1 cut(s) 4167
Bsp19I CCATGG 2 cut(s) 523, 3140
BspCNI CTCAG 9 cut(s) 273, 1363, 1582, 1843, 2296, 4086, 4180, 4513, 4754
BspHI TCATGA 2 cut(s) 2347, 4425
BspMAI CTGCAG 3 cut(s) 361, 2698, 3754
BspMI ACCTGC 1 cut(s) 5042
BspOI GCTAGC 1 cut(s) 4719
BspQI GCTCTTC 2 cut(s) 2318, 4342
BspT104I TTCGAA 1 cut(s) 1604
BspT107I GGYRCC 5 cut(s) 1336, 3409, 3853, 4051, 4706
BspTI CTTAAG 1 cut(s) 3434
BsrDI GCAATG 3 cut(s) 751, 2173, 3428
BsrFI RCCGGY 1 cut(s) 1957
BsrGI TGTACA 2 cut(s) 808, 2377
BssAI RCCGGY 1 cut(s) 1957
BssECI CCNNGG 6 cut(s) 523, 2187, 3140, 4248, 4315, 4601
BssNI GRCGYC 1 cut(s) 2036
BssT1I CCWWGG 4 cut(s) 523, 2187, 3140, 4315
Bst6I CTCTTC 5 cut(s) 1311, 2318, 2483, 4263, 4342
BstACI GRCGYC 1 cut(s) 2036
BstAFI CTTAAG 1 cut(s) 3434
BstAPI GCANNNNNTGC 3 cut(s) 356, 974, 5018
BstAUI TGTACA 2 cut(s) 808, 2377
BstBI TTCGAA 1 cut(s) 1604
BstDSI CCRYGG 2 cut(s) 523, 3140
BstENI CCTNNNNNAGG 2 cut(s) 401, 3116
BstH2I RGCGCY 2 cut(s) 2616, 2937
BstHHI GCGC 4 cut(s) 2615, 2936, 3479, 4292
BstMAI GTCTC 7 cut(s) 47, 899, 1765, 1766, 2970, 4076, 4642
BstNSI RCATGY 1 cut(s) 1004
BstPAI GACNNNNGTC 1 cut(s) 3384
BstSFI CTRYAG 9 cut(s) 357, 1341, 2214, 2694, 2799, 3750, 3948, 4230, 4481
BstSLI GKGCMC 2 cut(s) 1871, 3858
BstV2I GAAGAC 1 cut(s) 169
BstX2I RGATCY 3 cut(s) 550, 4102, 5087
BstXI CCANNNNNNTGG 2 cut(s) 2194, 3451
BstYI RGATCY 3 cut(s) 550, 4102, 5087
BsuI GTATCC 3 cut(s) 613, 718, 3193
BtgI CCRYGG 2 cut(s) 523, 3140
BtrI CACGTC 1 cut(s) 3482
BtsI GCAGTG 1 cut(s) 1762
BveI ACCTGC 1 cut(s) 5042
CaiI CAGNNNCTG 9 cut(s) 280, 356, 2960, 4106, 4676, 4748, 4904, 4934, 5018
CciI TCATGA 2 cut(s) 2347, 4425
CfoI GCGC 4 cut(s) 2615, 2936, 3479, 4292
Cfr10I RCCGGY 1 cut(s) 1957
Cfr13I GGNCC 7 cut(s) 213, 539, 926, 3592, 3971, 4139, 4598
CsiI ACCWGGT 2 cut(s) 2224, 4690
CspCI CAANNNNNGTGG 2 cut(s) 4552, 4587
DraIII CACNNNGTG 2 cut(s) 3115, 4694
EaeI YGGCCR 3 cut(s) 143, 4579, 5077
Eam1104I CTCTTC 5 cut(s) 1311, 2318, 2483, 4263, 4342
EarI CTCTTC 5 cut(s) 1311, 2318, 2483, 4263, 4342
EciI GGCGGA 1 cut(s) 223
Ecl136II GAGCTC 1 cut(s) 2597
Eco130I CCWWGG 4 cut(s) 523, 2187, 3140, 4315
Eco147I AGGCCT 1 cut(s) 3511
Eco24I GRGCYC 2 cut(s) 1131, 2599
Eco32I GATATC 1 cut(s) 46
Eco47I GGWCC 5 cut(s) 213, 926, 3971, 4139, 4598
Eco47III AGCGCT 1 cut(s) 2614
Eco53kI GAGCTC 1 cut(s) 2597
Eco57I CTGAAG 7 cut(s) 2507, 4791, 4821, 4881, 4911, 4941, 4950
EcoICRI GAGCTC 1 cut(s) 2597
EcoNI CCTNNNNNAGG 2 cut(s) 401, 3116
EcoO109I RGGNCCY 1 cut(s) 4139
EcoRI GAATTC 3 cut(s) 1507, 2470, 3937
EcoRV GATATC 1 cut(s) 46
EcoT14I CCWWGG 4 cut(s) 523, 2187, 3140, 4315
EcoT38I GRGCYC 2 cut(s) 1131, 2599
ErhI CCWWGG 4 cut(s) 523, 2187, 3140, 4315
FalI AAGNNNNNCTT 8 cut(s) 250, 282, 913, 945, 1443, 1475, 1611, 1643
FaqI GGGAC 4 cut(s) 120, 1721, 2459, 3663
FbaI TGATCA 1 cut(s) 2527
FblI GTMKAC 3 cut(s) 1137, 2665, 4666
FriOI GRGCYC 2 cut(s) 1131, 2599
GlaI GCGC 4 cut(s) 2614, 2935, 3478, 4291
GsaI CCCAGC 5 cut(s) 1379, 2998, 3233, 4908, 4938
GsuI CTGGAG 6 cut(s) 971, 2300, 2473, 3786, 4971, 5118
HaeII RGCGCY 2 cut(s) 2616, 2937
HapII CCGG 6 cut(s) 142, 195, 1958, 4731, 4755, 5124
HhaI GCGC 4 cut(s) 2615, 2936, 3479, 4292
Hin1I GRCGYC 1 cut(s) 2036
Hin6I GCGC 4 cut(s) 2613, 2934, 3477, 4290
HinP1I GCGC 4 cut(s) 2613, 2934, 3477, 4290
HincII GTYRAC 2 cut(s) 1842, 1942
HindII GTYRAC 2 cut(s) 1842, 1942
HindIII AAGCTT 2 cut(s) 1397, 2424
HpaI GTTAAC 1 cut(s) 1942
HpaII CCGG 6 cut(s) 142, 195, 1958, 4731, 4755, 5124
HphI GGTGA 7 cut(s) 704, 1118, 1191, 2594, 2745, 3101, 4680
Hpy99I CGWCG 2 cut(s) 185, 389
HpyCH4IV ACGT 3 cut(s) 2036, 2318, 3481
HpySE526I ACGT 3 cut(s) 2036, 2318, 3481
Hsp92I GRCGYC 1 cut(s) 2036
HspAI GCGC 4 cut(s) 2613, 2934, 3477, 4290
KpnI GGTACC 2 cut(s) 1340, 3413
Ksp22I TGATCA 1 cut(s) 2527
KspAI GTTAAC 1 cut(s) 1942
LguI GCTCTTC 2 cut(s) 2318, 4342
LmnI GCTCC 6 cut(s) 2594, 2991, 4279, 4990, 5020, 5039
MabI ACCWGGT 2 cut(s) 2224, 4690
MaeII ACGT 3 cut(s) 2036, 2318, 3481
MaeIII GTNAC 8 cut(s) 1037, 1273, 1538, 2751, 3130, 3769, 4153, 4405
MfeI CAATTG 1 cut(s) 2058
MflI RGATCY 3 cut(s) 550, 4102, 5087
MhlI GDGCHC 5 cut(s) 1131, 1871, 2330, 2599, 3858
MlsI TGGCCA 2 cut(s) 4581, 5079
MluNI TGGCCA 2 cut(s) 4581, 5079
MlyI GAGTC 4 cut(s) 292, 1811, 2759, 2972
MmeI TCCRAC 5 cut(s) 1910, 2175, 2272, 2380, 4576
Mox20I TGGCCA 2 cut(s) 4581, 5079
MroXI GAANNNNTTC 1 cut(s) 2343
MscI TGGCCA 2 cut(s) 4581, 5079
MslI CAYNNNNRTG 2 cut(s) 1874, 2556
Msp20I TGGCCA 2 cut(s) 4581, 5079
MspA1I CMGCKG 2 cut(s) 1988, 4295
MspCI CTTAAG 1 cut(s) 3434
MspI CCGG 6 cut(s) 142, 195, 1958, 4731, 4755, 5124
MunI CAATTG 1 cut(s) 2058
Mva1269I GAATGC 6 cut(s) 784, 994, 1209, 2635, 3192, 4249
NciI CCSGG 3 cut(s) 142, 196, 4731
NcoI CCATGG 2 cut(s) 523, 3140
NheI GCTAGC 1 cut(s) 4715
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 4 cut(s) 2751, 3769, 4153, 4405
NspI RCATGY 1 cut(s) 1004
NspV TTCGAA 1 cut(s) 1604
OliI CACNNNNGTG 1 cut(s) 1874
PacI TTAATTAA 1 cut(s) 2538
PagI TCATGA 2 cut(s) 2347, 4425
PaqCI CACCTGC 1 cut(s) 5042
PceI AGGCCT 1 cut(s) 3511
PciSI GCTCTTC 2 cut(s) 2318, 4342
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 6 cut(s) 784, 994, 1209, 2635, 3192, 4249
PdmI GAANNNNTTC 1 cut(s) 2343
PflMI CCANNNNNTGG 3 cut(s) 4376, 4676, 4994
PfoI TCCNGGA 3 cut(s) 396, 683, 4105
PleI GAGTC 4 cut(s) 291, 1810, 2758, 2972
PpsI GAGTC 4 cut(s) 291, 1810, 2758, 2972
PpuMI RGGWCCY 1 cut(s) 4139
PshAI GACNNNNGTC 1 cut(s) 3384
PshBI ATTAAT 2 cut(s) 599, 2534
Psp124BI GAGCTC 1 cut(s) 2599
Psp5II RGGWCCY 1 cut(s) 4139
PspFI CCCAGC 5 cut(s) 1375, 2994, 3229, 4904, 4934
PspPI GGNCC 7 cut(s) 213, 539, 926, 3592, 3971, 4139, 4598
PspPPI RGGWCCY 1 cut(s) 4139
PsrI GAACNNNNNNTAC 2 cut(s) 1918, 1950
PstI CTGCAG 3 cut(s) 361, 2698, 3754
PstNI CAGNNNCTG 9 cut(s) 280, 356, 2960, 4106, 4676, 4748, 4904, 4934, 5018
PsuI RGATCY 3 cut(s) 550, 4102, 5087
PvuII CAGCTG 2 cut(s) 1988, 4295
RseI CAYNNNNRTG 2 cut(s) 1874, 2556
SacI GAGCTC 1 cut(s) 2599
SapI GCTCTTC 2 cut(s) 2318, 4342
Sau96I GGNCC 7 cut(s) 213, 539, 926, 3592, 3971, 4139, 4598
SchI GAGTC 4 cut(s) 292, 1811, 2759, 2972
SduI GDGCHC 5 cut(s) 1131, 1871, 2330, 2599, 3858
SexAI ACCWGGT 2 cut(s) 2224, 4690
SfcI CTRYAG 9 cut(s) 357, 1341, 2214, 2694, 2799, 3750, 3948, 4230, 4481
SfuI TTCGAA 1 cut(s) 1604
SinI GGWCC 5 cut(s) 213, 926, 3971, 4139, 4598
SmiMI CAYNNNNRTG 2 cut(s) 1874, 2556
SmlI CTYRAG 6 cut(s) 1517, 1711, 1728, 2480, 2564, 3434
SmoI CTYRAG 6 cut(s) 1517, 1711, 1728, 2480, 2564, 3434
SpeI ACTAGT 1 cut(s) 3383
SseBI AGGCCT 1 cut(s) 3511
SspI AATATT 2 cut(s) 2002, 4014
SstI GAGCTC 1 cut(s) 2599
StuI AGGCCT 1 cut(s) 3511
StyI CCWWGG 4 cut(s) 523, 2187, 3140, 4315
TaiI ACGT 3 cut(s) 2039, 2321, 3484
TaqI TCGA 7 cut(s) 120, 1511, 1604, 2608, 2626, 2849, 4646
TatI WGTACW 4 cut(s) 808, 1633, 1741, 2377
TauI GCSGC 4 cut(s) 239, 1994, 2497, 4769
TseFI GTSAC 4 cut(s) 2751, 3769, 4153, 4405
Tsp45I GTSAC 4 cut(s) 2751, 3769, 4153, 4405
TspGWI ACGGA 5 cut(s) 373, 1421, 2192, 2407, 3738
Van91I CCANNNNNTGG 3 cut(s) 4376, 4676, 4994
Vha464I CTTAAG 1 cut(s) 3434
VpaK11BI GGWCC 5 cut(s) 213, 926, 3971, 4139, 4598
VspI ATTAAT 2 cut(s) 599, 2534
XagI CCTNNNNNAGG 2 cut(s) 401, 3116
XbaI TCTAGA 1 cut(s) 409
XceI RCATGY 1 cut(s) 1004
XcmI CCANNNNNNNNNTGG 3 cut(s) 223, 530, 5087
XmiI GTMKAC 3 cut(s) 1137, 2665, 4666
XmnI GAANNNNTTC 1 cut(s) 2343
ZraI GACGTC 1 cut(s) 2037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.