pycom11g05700

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0012341
Physical Location & Seq
Forward (+)
4361144 .. 4361932
789 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 789 bp
ATGGCCACAGAGAAAGATAACCATGCGTCAGTCAGACTTTTCATGACCAAGTTTGGCTACGTCAAGTTCCGAACGCCAGCGATTCTCGTGAACCCGGTTTGTTACAGTCCCCGTCATGTGTCTTCTGGCGTTGAGATTGCAAAGTTGAAGGTTGAAGAAGCTGAATATCTCTACAGAAAGTGTATGGAAAATACTGAGTTTTTCCCTCATGATATAGATAAAGTGCTTGGGAATAATCTGAGTTTGGGGACTTGGGTGGCTTACCCTAGAGGAGAGTTGAAGGTTGGAGATTTTGGGGTTAATGGTCATCTACCTGACAGTTGGGCTATGCTTAGCGTGTGGAATAGTGGGGAGCTTTTTAACCTGAGGCTAGGGAATGCACCCTTATCTTGCTTAATGTATGCAAAAAGTTGGAAATGGATGGCTAGGGTTTTTCCTTGCTTTAAATTACTGCCTTCCATGCCTGATTTTTTTACCCCTTTTGGATTTTACTTCATGTATGGGTTGCACCATGAAGGACCATTGTCAGGGAAATTGGTGAGGGCTCTCTGCCAGTTTGTGCACAACGTGGCTGCTACCACTTCAGAGAATTGCAAGGTTATAGTGACAGAAGTTGGGGGCTGTGATCCAGTGAGACATCACATCCCACATTGGAAATTGCTCTCATGCTATGAAGATTTGTGGTGCATAAAGGCCTTGAAAAATGAAGATAGAAGAACTAACAGCCTCCATGAATTGACAAAAACCCACCCAACAAAATCTCTCTTTGTAGATCCAAGAGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

263

Amino Acids

29.98

Weight (kDa)

8.51

Isoelectric Point (pI)

32.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012341)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30090
fragaria_vesca FvH4_3g39120 FvH4_3g39120
malus_domestica MD03G1064100.v1.1 MD11G1067900.v1.1
prunus_persica Prupe.6G053400_v2.0.a1
pyrus_communis pycom03g05160 pycom11g05700
rosa_chinensis RchiOBHm_Chr5g0070491
rosa_laevigata RLG00000036137
rosa_multiflora Rmu_sc0005708.1_g000009
rosa_roxburghii Rroxscaffold_1G00010740
rosa_rugosa Rorug05G0406200 Rorug05G0406300
rosa_samantha Rh5AG461400 Rh5BG479700 Rh5CG503900 Rh5DG492000
rosa_wichuraiana Rw5G043020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 620, 767
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 567
AdeI CACNNNGTG 1 cut(s) 568
AfiI CCNNNNNNNGG 1 cut(s) 527
AgsI TTSAA 4 cut(s) 148, 155, 280, 700
AluBI AGCT 2 cut(s) 161, 355
AluI AGCT 2 cut(s) 161, 355
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 1 cut(s) 628
Alw44I GTGCAC 1 cut(s) 560
AlwI GGATC 2 cut(s) 620, 767
AoxI GGCC 2 cut(s) 3, 693
ApaLI GTGCAC 1 cut(s) 560
ApeKI GCWGC 1 cut(s) 572
AspS9I GGNCC 1 cut(s) 518
AsuC2I CCSGG 1 cut(s) 95
AsuHPI GGTGA 1 cut(s) 550
AvaII GGWCC 1 cut(s) 518
AxyI CCTNAGG 1 cut(s) 365
BaeGI GKGCMC 1 cut(s) 564
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 547
BauI CACGAG 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 564
BbvI GCAGC 1 cut(s) 559
BccI CCATC 1 cut(s) 415
BcnI CCSGG 1 cut(s) 95
BcoDI GTCTC 1 cut(s) 628
BfaI CTAG 3 cut(s) 267, 371, 426
BfmI CTRYAG 1 cut(s) 172
BisI GCNGC 1 cut(s) 573
BlpI GCTNAGC 1 cut(s) 332
BlsI GCNGC 1 cut(s) 574
Bme1390I CCNGG 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 518
BmgT120I GGNCC 1 cut(s) 518
BmrFI CCNGG 1 cut(s) 95
BoxI GACNNNNGTC 1 cut(s) 523
BpiI GAAGAC 1 cut(s) 114
Bpu1102I GCTNAGC 1 cut(s) 332
BpuMI CCSGG 1 cut(s) 95
Bsc4I CCNNNNNNNGG 1 cut(s) 527
Bse1I ACTGG 2 cut(s) 553, 629
Bse21I CCTNAGG 1 cut(s) 365
BseGI GGATG 2 cut(s) 426, 642
BseLI CCNNNNNNNGG 1 cut(s) 527
BseMII CTCAG 3 cut(s) 186, 230, 356
BseNI ACTGG 2 cut(s) 553, 629
BseRI GAGGAG 1 cut(s) 285
BseSI GKGCMC 1 cut(s) 564
BseXI GCAGC 1 cut(s) 559
BshFI GGCC 2 cut(s) 5, 695
BsiHKAI GWGCWC 1 cut(s) 564
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 2 cut(s) 93, 262
BslI CCNNNNNNNGG 1 cut(s) 527
BsmAI GTCTC 1 cut(s) 628
BsmFI GGGAC 2 cut(s) 93, 262
BsmI GAATGC 1 cut(s) 382
BsnI GGCC 2 cut(s) 5, 695
Bsp1286I GDGCHC 2 cut(s) 547, 564
Bsp143I GATC 2 cut(s) 625, 772
Bsp1720I GCTNAGC 1 cut(s) 332
BspANI GGCC 2 cut(s) 5, 695
BspCNI CTCAG 3 cut(s) 187, 231, 357
BspHI TCATGA 2 cut(s) 42, 208
BspPI GGATC 2 cut(s) 620, 767
BsrI ACTGG 2 cut(s) 553, 629
BssMI GATC 2 cut(s) 625, 772
BssSI CACGAG 1 cut(s) 86
Bst2BI CACGAG 1 cut(s) 86
Bst4CI ACNGT 2 cut(s) 107, 320
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 4 cut(s) 195, 239, 332, 365
BstF5I GGATG 2 cut(s) 426, 642
BstKTI GATC 2 cut(s) 628, 775
BstMAI GTCTC 1 cut(s) 628
BstMBI GATC 2 cut(s) 625, 772
BstMWI GCNNNNNNNGC 1 cut(s) 460
BstPAI GACNNNNGTC 1 cut(s) 523
BstSCI CCNGG 1 cut(s) 93
BstSFI CTRYAG 1 cut(s) 172
BstSLI GKGCMC 1 cut(s) 564
BstV1I GCAGC 1 cut(s) 559
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 772
BstYI RGATCY 1 cut(s) 772
Bsu36I CCTNAGG 1 cut(s) 365
BsuRI GGCC 2 cut(s) 5, 695
BtsCI GGATG 2 cut(s) 426, 642
BtsIMutI CAGTG 1 cut(s) 636
Cac8I GCNNGC 1 cut(s) 78
CciI TCATGA 2 cut(s) 42, 208
Cfr13I GGNCC 1 cut(s) 518
CseI GACGC 1 cut(s) 15
CviAII CATG 9 cut(s) 23, 43, 116, 209, 460, 496, 512, 666, 731
DdeI CTNAG 4 cut(s) 195, 239, 332, 365
DpnI GATC 2 cut(s) 627, 774
DpnII GATC 2 cut(s) 625, 772
DraI TTTAAA 1 cut(s) 445
DraIII CACNNNGTG 1 cut(s) 568
EaeI YGGCCR 1 cut(s) 3
Eco147I AGGCCT 1 cut(s) 695
Eco24I GRGCYC 1 cut(s) 547
Eco47I GGWCC 1 cut(s) 518
Eco57I CTGAAG 1 cut(s) 567
Eco81I CCTNAGG 1 cut(s) 365
EcoT38I GRGCYC 1 cut(s) 547
FaeI CATG 9 cut(s) 26, 46, 119, 212, 463, 499, 515, 669, 734
FaqI GGGAC 2 cut(s) 93, 262
FatI CATG 9 cut(s) 22, 42, 115, 208, 459, 495, 511, 665, 730
Fnu4HI GCNGC 1 cut(s) 573
FokI GGATG 2 cut(s) 433, 629
FriOI GRGCYC 1 cut(s) 547
Fsp4HI GCNGC 1 cut(s) 573
FspBI CTAG 3 cut(s) 267, 371, 426
GluI GCNGC 1 cut(s) 573
HaeIII GGCC 2 cut(s) 5, 695
HapII CCGG 1 cut(s) 95
HgaI GACGC 1 cut(s) 15
Hin1II CATG 9 cut(s) 26, 46, 119, 212, 463, 499, 515, 669, 734
HinfI GANTC 1 cut(s) 82
HpaII CCGG 1 cut(s) 95
HphI GGTGA 1 cut(s) 550
Hpy166II GTNNAC 2 cut(s) 91, 562
Hpy188I TCNGA 4 cut(s) 35, 71, 240, 586
Hpy188III TCNNGA 3 cut(s) 43, 88, 209
Hpy8I GTNNAC 2 cut(s) 91, 562
HpyAV CCTTC 4 cut(s) 142, 274, 465, 509
HpyCH4III ACNGT 2 cut(s) 107, 320
HpyCH4IV ACGT 2 cut(s) 60, 567
HpyCH4V TGCA 7 cut(s) 140, 380, 404, 508, 562, 594, 687
HpyF10VI GCNNNNNNNGC 1 cut(s) 460
HpyF3I CTNAG 4 cut(s) 195, 239, 332, 365
HpySE526I ACGT 2 cut(s) 60, 567
Hsp92II CATG 9 cut(s) 26, 46, 119, 212, 463, 499, 515, 669, 734
Kzo9I GATC 2 cut(s) 625, 772
LmnI GCTCC 1 cut(s) 352
LpnPI CCDG 9 cut(s) 90, 108, 111, 327, 377, 477, 513, 566, 642
Lsp1109I GCAGC 1 cut(s) 559
MaeI CTAG 3 cut(s) 267, 371, 426
MaeII ACGT 2 cut(s) 60, 567
MaeIII GTNAC 2 cut(s) 101, 604
MalI GATC 2 cut(s) 627, 774
MboI GATC 2 cut(s) 625, 772
MboII GAAGA 5 cut(s) 114, 167, 686, 719, 726
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 2 cut(s) 547, 564
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 446, 533, 589, 656, 734
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 2 cut(s) 265, 392
MnlI CCTC 6 cut(s) 216, 263, 360, 534, 737, 775
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 300, 360, 395, 444
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 1 cut(s) 95
Mva1269I GAATGC 1 cut(s) 382
MwoI GCNNNNNNNGC 1 cut(s) 460
NciI CCSGG 1 cut(s) 95
NdeII GATC 2 cut(s) 625, 772
NlaIII CATG 9 cut(s) 26, 46, 119, 212, 463, 499, 515, 669, 734
NmuCI GTSAC 1 cut(s) 604
PagI TCATGA 2 cut(s) 42, 208
PceI AGGCCT 1 cut(s) 695
PctI GAATGC 1 cut(s) 382
PfeI GAWTC 1 cut(s) 82
PkrI GCNGC 1 cut(s) 574
PshAI GACNNNNGTC 1 cut(s) 523
PspPI GGNCC 1 cut(s) 518
PsuI RGATCY 1 cut(s) 772
SaqAI TTAA 4 cut(s) 300, 360, 395, 444
SatI GCNGC 1 cut(s) 573
Sau3AI GATC 2 cut(s) 625, 772
Sau96I GGNCC 1 cut(s) 518
ScrFI CCNGG 1 cut(s) 95
SduI GDGCHC 2 cut(s) 547, 564
SfcI CTRYAG 1 cut(s) 172
SinI GGWCC 1 cut(s) 518
Sse9I AATT 5 cut(s) 446, 533, 589, 656, 734
SseBI AGGCCT 1 cut(s) 695
SspMI CTAG 3 cut(s) 267, 371, 426
StuI AGGCCT 1 cut(s) 695
StyD4I CCNGG 1 cut(s) 93
TaaI ACNGT 2 cut(s) 107, 320
TaiI ACGT 2 cut(s) 63, 570
TasI AATT 5 cut(s) 446, 533, 589, 656, 734
TfiI GAWTC 1 cut(s) 82
Tru1I TTAA 4 cut(s) 300, 360, 395, 444
Tru9I TTAA 4 cut(s) 300, 360, 395, 444
TscAI CASTG 1 cut(s) 636
TseFI GTSAC 1 cut(s) 604
TseI GCWGC 1 cut(s) 572
Tsp45I GTSAC 1 cut(s) 604
TspDTI ATGAA 6 cut(s) 31, 484, 528, 687, 720, 747
TspRI CASTG 1 cut(s) 636
VneI GTGCAC 1 cut(s) 560
VpaK11BI GGWCC 1 cut(s) 518
XspI CTAG 3 cut(s) 267, 371, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.