Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0009672

Physical Location & Seq

Genomic Coordinates Reverse (-)

7251632 .. 7256586

Gene Structure 4955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g09100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGAGCTCGTACAGCCTTCTTATCCGCACCATGGCCCGGTGGCTGAATCCCCTTCTGGGTTCTCTTCTCCGGTGAGTTTCCGACGTGGGTTTGACCGGCCTGCGACTTCCTCCTCTCAGTCTCAGTTGCCCGAGGTTTGTGAAGAAGGTGGTGGTGGTGACAAGGTGCACGTGGCGGTTGGGAAGTCTGTGGAGAAAGCTTTGAGCTTGCTTCGTTGGACGTTCAAGCACTTTGGCTGTAATGAAATTTGTATACTTCATGTTCATCAGCCATCTCCGCTCATTCCCACTCCCTTAGGAAAACTACCTGCAAGTCAGGCAAACGACGAGGTGGTAACGGCTTTCAGGAGGGAGGAAAGGGAACGGAAAATGGAGCTTTTGCAAAATTATTTGAGGGCTTGCTCTAGAGCAAAGGTTAAAGCAAGCACTGTTATGGTTGAAGCTAATGAAATTCATAAAGGAATTGTAGAGATGGTCAACAATAATGGGGTTAGGAAGCTTGTTATGGGAGCTGTACCAGAAGATTGCATGAAGGTGAAAAAGAGCTCCAGCAAAGCAAGTTATGTAGCCAAATGTGCTCCATTGTTCTGTGAAATACGGTTTATCAACAAAGGGAAACATGTCTGGACGAGAGATGCTTCAGATGGCCAAAGTTCTCCGACCTCATGTTCTAGCTCTGGTTCAGGATATAATTTTGCTGAGGGAAGGATGCCTTCAGATTCTGATTTAAACGTTGAGGAACAGAGCTTATGCCGTATGCTTACGGAAGCTACACTAGAAGCCGAGGCATCAAGGGACAAGGCATTTGCAGAGCTATCAAAGCGCAAAAGTTTAGAATCAGAAGCTATGAATGCTATCAACAAGGCCAAGGCATTTGAGTTAGCCCGTGGCCGAGAAGTTAAACTTAGAGAAGAGGCTGAGGACGCCTTGAGAATCATGATTGAGGAACAACAAAAACTCTTGGAAGAGAAGGAAGAAATTAGTGGTGAGATAAGCAGGGCCATGAGAAATATTGCCCTTCTAGACAGCCGAGCACAGGAAGCAAGTCGAAGGTTTGATGAAGCTTCTGGGGAAGTGAAGCAAATTCAGACTTCGATTGCAACTCTTCAGCAGGAAAAACAATGTATTCAACGACAAAAGGTGGAAGCCCTTCACTGGATTGAGCGGTGGAGGAATCATAGACAAGCTGGAGCCGCAAACTGCAATGCGCTCATTGGGTTTGTTGAAGAGCTGCCGAAATTAGCAGAATTCTCATTGTCAGATTTGCAGACTGCAACATGCAATTTTTCTGAGAGCTTTAAAATTGGGCAGGGAGGATATGGTTGTGTTTATAAGGGGGAAATGCTGGGCAGAACTGTCGCCATAAGGAAATTGCATCCACACAACTTGCAAGAACAAGCTGAGTTTCAACAAGAGGTACAAGTTCTTGGAAAATTACAGCATCGTCACCTTGTGACCTTGCTTGGTGTTTGTCCAGAAGCCTGGTCGCTTGTATACGAATACTTATCAAATGGGAGTCTGCAAGACCATCTTTTCAGGAAAAGCAATATTTCTCTGGTGCCATGGAAGACCCGAACACGGATAATTGCTCAAATCTCTAGTGCCCTTTGCTTCTTGCACTCCTCTAGACCTGAAAAGATTGTCCATGGTGATTTGAAGCTGCAAAACATACTACTAGATTCTGAACTCAACTGCAAGATTTGTGATTTTGGGATTTGCAGGCTGGTCACTGAAGACAATCTTTACTGTCGAAGTTTCCGCCGGGGAACTGAGCCAAAGGGTGCTTTTCGTTACACAGATCCAGAGCTGCAGAGAGTCGGGGTCCTGACGCCCAAGTCTGATATTTATTCCTTTGGGCTGATCATTCTGCAGTTAGTCACCGGACGGCCTCCAGTTGGCTTAGCAAGTGAGGTGCGCAAGGCAGTTTTAGGTGGAAATTTGGCATCGATTATAGATTCCTCAGCCGGAGAATGGCCTATATCTGTGGCAGCGCGATTGGTAGACCTTGGTTTGCAATGCTGTGAATTGAATAGTAGGGAAAGACCAGAGCTTACGCCAGCTTTTGTGAGGGAATTGCAGCAGCTACATGCCTCTGAAGAGCGACCAGTACCATCTTTTTTCTTGTGTCCGATCCTTCAGGAAATAATGCATGACCCGCAGTTGGCAGCTGATGGCTTCACGTACGAAGGTGAAGCTTTGCGTGGATGGTTACAAAATTGTCGCGAGACTTCTCCAATGACCAATTTGAAATTGAGTCACTTGCATCTCACTCCCAACGATGCCTTACGCCTTGCAATTCAAGATTGGCTTTGCAAGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

774

Amino Acids

86.36

Weight (kDa)

7.05

Isoelectric Point (pI)

56.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009672)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 FvH4_3g35970
malus_domestica	MD03G1095200.v1.1 MD11G1110200.v1.1
prunus_persica	Prupe.6G078700_v2.0.a1 Prupe.6G078700_v2.0.a1
pyrus_communis	pycom03g07770 pycom11g09100
rosa_chinensis	RchiOBHm_Chr5g0064331
rosa_laevigata	RLG00000035717
rosa_multiflora	Rmu_sc0000806.1_g000029
rosa_roxburghii	Rroxscaffold_1G00016670
rosa_rugosa	Rorug05G0364100 Rorug05G0364100
rosa_samantha	Rh5AG422200 Rh5BG438100 Rh5CG460600 Rh5DG451000
rosa_wichuraiana	Rw5G039740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1332
AasI	GACNNNNNNGTC	1 cut(s)	1834
Acc16I	TGCGCA	1 cut(s)	1916
Acc36I	ACCTGC	1 cut(s)	316
AccB1I	GGYRCC	1 cut(s)	1558
AccBSI	CCGCTC	2 cut(s)	280, 1165
AccI	GTMKAC	3 cut(s)	253, 1494, 2001
AccII	CGCG	2 cut(s)	1993, 2223
AciI	CCGC	7 cut(s)	26, 176, 278, 1165, 1194, 1759, 2156
AclI	AACGTT	1 cut(s)	732
AclWI	GGATC	2 cut(s)	1793, 2125
AcoI	YGGCCR	2 cut(s)	646, 889
AcsI	RAATTY	5 cut(s)	246, 450, 1083, 1247, 1936
AcuI	CTGAAG	6 cut(s)	624, 699, 1091, 1752, 2115, 2120
AcvI	CACGTG	1 cut(s)	172
AcyI	GRCGYC	2 cut(s)	924, 1829
AdeI	CACNNNGTG	1 cut(s)	1453
AfaI	GTAC	5 cut(s)	12, 516, 1419, 2109, 2183
AfiI	CCNNNNNNNGG	9 cut(s)	32, 37, 57, 1036, 1155, 1578, 1895, 1971, 2161
AflIII	ACRYGT	1 cut(s)	619
AgsI	TTSAA	9 cut(s)	226, 440, 1130, 1226, 1409, 1657, 2029, 2248, 2300
AjiI	CACGTC	1 cut(s)	86
AjnI	CCWGG	1 cut(s)	1481
Alw21I	GWGCWC	5 cut(s)	9, 171, 548, 580, 1036
Alw26I	GTCTC	2 cut(s)	126, 2219
Alw44I	GTGCAC	1 cut(s)	167
AlwI	GGATC	2 cut(s)	1793, 2125
AlwNI	CAGNNNCTG	1 cut(s)	722
Ama87I	CYCGRG	1 cut(s)	131
AoxI	GGCC	8 cut(s)	34, 98, 646, 864, 889, 999, 1886, 1973
ApaLI	GTGCAC	1 cut(s)	167
ApeKI	GCWGC	7 cut(s)	1231, 1660, 1807, 1988, 2077, 2080, 2165
ApoI	RAATTY	5 cut(s)	246, 450, 1083, 1247, 1936
ArsI	GACNNNNNNTTYG	2 cut(s)	788, 820
Asp700I	GAANNNNTTC	1 cut(s)	1149
AspLEI	GCGC	4 cut(s)	825, 1210, 1917, 1993
AspS9I	GGNCC	3 cut(s)	35, 999, 1822
AsuC2I	CCSGG	2 cut(s)	38, 1763
AsuHPI	GGTGA	8 cut(s)	85, 170, 547, 998, 1439, 1661, 1870, 2201
AvaI	CYCGRG	1 cut(s)	131
AvaII	GGWCC	1 cut(s)	1822
AxyI	CCTNAGG	1 cut(s)	295
BaeGI	GKGCMC	2 cut(s)	171, 1606
BalI	TGGCCA	1 cut(s)	648
BanI	GGYRCC	1 cut(s)	1558
BanII	GRGCYC	2 cut(s)	9, 548
BbrPI	CACGTG	1 cut(s)	172
BbsI	GAAGAC	2 cut(s)	1574, 1740
Bbv12I	GWGCWC	5 cut(s)	9, 171, 548, 580, 1036
BbvCI	CCTCAGC	3 cut(s)	699, 918, 1960
BbvI	GCAGC	7 cut(s)	1218, 1647, 1794, 2000, 2089, 2092, 2177
BccI	CCATC	7 cut(s)	280, 466, 638, 1536, 2119, 2165, 2199
BceAI	ACGGC	3 cut(s)	354, 738, 1901
BcgI	CGANNNNNNTGC	2 cut(s)	1339, 1373
BciT130I	CCWGG	1 cut(s)	1483
BclI	TGATCA	1 cut(s)	1860
BcnI	CCSGG	2 cut(s)	38, 1763
BcoDI	GTCTC	2 cut(s)	126, 2219
BfaI	CTAG	7 cut(s)	405, 672, 776, 1022, 1599, 1626, 1676
BfmI	CTRYAG	2 cut(s)	1808, 1868
BfuAI	ACCTGC	1 cut(s)	316
BisI	GCNGC	8 cut(s)	1194, 1232, 1661, 1808, 1989, 2078, 2081, 2166
BlpI	GCTNAGC	1 cut(s)	1900
BlsI	GCNGC	8 cut(s)	1195, 1233, 1662, 1809, 1990, 2079, 2082, 2167
Bme1390I	CCNGG	3 cut(s)	38, 1483, 1763
Bme18I	GGWCC	1 cut(s)	1822
BmeT110I	CYCGRG	1 cut(s)	131
BmgBI	CACGTC	1 cut(s)	86
BmgT120I	GGNCC	3 cut(s)	35, 999, 1822
BmiI	GGNNCC	3 cut(s)	1192, 1560, 1823
BmrFI	CCNGG	3 cut(s)	38, 1483, 1763
BmsI	GCATC	8 cut(s)	625, 699, 797, 1384, 1450, 1952, 2269, 2272
BpiI	GAAGAC	2 cut(s)	1574, 1740
BpmI	CTGGAG	3 cut(s)	532, 1209, 1875
Bpu10I	CCTNAGC	3 cut(s)	699, 918, 1960
Bpu1102I	GCTNAGC	1 cut(s)	1900
BpuEI	CTTGAG	1 cut(s)	949
BpuMI	CCSGG	2 cut(s)	38, 1763
Bsa29I	ATCGAT	1 cut(s)	1946
BsaAI	YACGTR	2 cut(s)	172, 2181
BsaHI	GRCGYC	2 cut(s)	924, 1829
BsaJI	CCNNGG	9 cut(s)	31, 132, 783, 867, 886, 1562, 1645, 1762, 2005
BsaWI	WCCGGW	2 cut(s)	70, 1880
Bsc4I	CCNNNNNNNGG	9 cut(s)	32, 37, 57, 1036, 1155, 1578, 1895, 1971, 2161
Bse118I	RCCGGY	1 cut(s)	96
Bse1I	ACTGG	3 cut(s)	1160, 1892, 2105
Bse21I	CCTNAGG	1 cut(s)	295
Bse3DI	GCAATG	2 cut(s)	1210, 2021
BseBI	CCWGG	1 cut(s)	1483
BseCI	ATCGAT	1 cut(s)	1946
BseDI	CCNNGG	9 cut(s)	31, 132, 783, 867, 886, 1562, 1645, 1762, 2005
BseGI	GGATG	3 cut(s)	714, 1375, 2210
BseLI	CCNNNNNNNGG	9 cut(s)	32, 37, 57, 1036, 1155, 1578, 1895, 1971, 2161
BseMI	GCAATG	2 cut(s)	1210, 2021
BseMII	CTCAG	8 cut(s)	131, 137, 690, 909, 1281, 1392, 1761, 1974
BseNI	ACTGG	3 cut(s)	1160, 1892, 2105
BseRI	GAGGAG	2 cut(s)	103, 1612
BseSI	GKGCMC	2 cut(s)	171, 1606
BseXI	GCAGC	7 cut(s)	1218, 1647, 1794, 2000, 2089, 2092, 2177
BseYI	CCCAGC	1 cut(s)	1345
Bsh1236I	CGCG	2 cut(s)	1993, 2223
BshFI	GGCC	8 cut(s)	36, 100, 648, 866, 891, 1001, 1888, 1975
BshNI	GGYRCC	1 cut(s)	1558
BshVI	ATCGAT	1 cut(s)	1946
BsiHKAI	GWGCWC	5 cut(s)	9, 171, 548, 580, 1036
BsiHKCI	CYCGRG	1 cut(s)	131
BsiSI	CCGG	6 cut(s)	38, 71, 97, 1762, 1881, 1965
BsiWI	CGTACG	1 cut(s)	2181
BslFI	GGGAC	1 cut(s)	809
BslI	CCNNNNNNNGG	9 cut(s)	32, 37, 57, 1036, 1155, 1578, 1895, 1971, 2161
BsmAI	GTCTC	2 cut(s)	126, 2219
BsmFI	GGGAC	1 cut(s)	809
BsmI	GAATGC	1 cut(s)	856
BsnI	GGCC	8 cut(s)	36, 100, 648, 866, 891, 1001, 1888, 1975
BsoBI	CYCGRG	1 cut(s)	131
Bsp1286I	GDGCHC	6 cut(s)	9, 171, 548, 580, 1036, 1606
Bsp143I	GATC	3 cut(s)	1798, 1860, 2130
Bsp1720I	GCTNAGC	1 cut(s)	1900
Bsp19I	CCATGG	3 cut(s)	31, 1562, 1645
Bsp68I	TCGCGA	1 cut(s)	2223
BspACI	CCGC	7 cut(s)	26, 176, 278, 1165, 1194, 1759, 2156
BspANI	GGCC	8 cut(s)	36, 100, 648, 866, 891, 1001, 1888, 1975
BspCNI	CTCAG	8 cut(s)	130, 136, 691, 910, 1282, 1393, 1762, 1973
BspDI	ATCGAT	1 cut(s)	1946
BspFNI	CGCG	2 cut(s)	1993, 2223
BspHI	TCATGA	1 cut(s)	936
BspLI	GGNNCC	3 cut(s)	1192, 1560, 1823
BspMAI	CTGCAG	2 cut(s)	1812, 1872
BspMI	ACCTGC	1 cut(s)	316
BspPI	GGATC	2 cut(s)	1793, 2125
BspQI	GCTCTTC	2 cut(s)	1221, 2091
BspT107I	GGYRCC	1 cut(s)	1558
BsrBI	CCGCTC	2 cut(s)	280, 1165
BsrDI	GCAATG	2 cut(s)	1210, 2021
BsrFI	RCCGGY	1 cut(s)	96
BsrI	ACTGG	3 cut(s)	1160, 1892, 2105
BssAI	RCCGGY	1 cut(s)	96
BssECI	CCNNGG	9 cut(s)	31, 132, 783, 867, 886, 1562, 1645, 1762, 2005
BssMI	GATC	3 cut(s)	1798, 1860, 2130
BssNAI	GTATAC	2 cut(s)	254, 1495
BssNI	GRCGYC	2 cut(s)	924, 1829
BssT1I	CCWWGG	5 cut(s)	31, 867, 1562, 1645, 2005
Bst1107I	GTATAC	2 cut(s)	254, 1495
Bst2UI	CCWGG	1 cut(s)	1483
Bst4CI	ACNGT	4 cut(s)	430, 600, 1357, 1748
Bst6I	CTCTTC	6 cut(s)	70, 906, 960, 1110, 1221, 2091
BstACI	GRCGYC	2 cut(s)	924, 1829
BstBAI	YACGTR	2 cut(s)	172, 2181
BstC8I	GCNNGC	6 cut(s)	102, 209, 400, 424, 1721, 2058
BstDSI	CCRYGG	4 cut(s)	31, 886, 1562, 1645
BstF5I	GGATG	3 cut(s)	714, 1375, 2210
BstFNI	CGCG	2 cut(s)	1993, 2223
BstHHI	GCGC	4 cut(s)	825, 1210, 1917, 1993
BstKTI	GATC	3 cut(s)	1801, 1863, 2133
BstMAI	GTCTC	2 cut(s)	126, 2219
BstMBI	GATC	3 cut(s)	1798, 1860, 2130
BstNI	CCWGG	1 cut(s)	1483
BstNSI	RCATGY	3 cut(s)	623, 1281, 2090
BstSCI	CCNGG	3 cut(s)	36, 1481, 1761
BstSFI	CTRYAG	2 cut(s)	1808, 1868
BstSLI	GKGCMC	2 cut(s)	171, 1606
BstUI	CGCG	2 cut(s)	1993, 2223
BstV1I	GCAGC	7 cut(s)	1218, 1647, 1794, 2000, 2089, 2092, 2177
BstV2I	GAAGAC	2 cut(s)	1574, 1740
BstX2I	RGATCY	1 cut(s)	1798
BstXI	CCANNNNNNTGG	1 cut(s)	1482
BstYI	RGATCY	1 cut(s)	1798
BstZ17I	GTATAC	2 cut(s)	254, 1495
Bsu15I	ATCGAT	1 cut(s)	1946
Bsu36I	CCTNAGG	1 cut(s)	295
BsuRI	GGCC	8 cut(s)	36, 100, 648, 866, 891, 1001, 1888, 1975
BsuTUI	ATCGAT	1 cut(s)	1946
BtgI	CCRYGG	4 cut(s)	31, 886, 1562, 1645
BtrI	CACGTC	1 cut(s)	86
BtsCI	GGATG	3 cut(s)	714, 1375, 2210
BtsIMutI	CAGTG	3 cut(s)	426, 1153, 1728
BtuMI	TCGCGA	1 cut(s)	2223
BveI	ACCTGC	1 cut(s)	316
Cac8I	GCNNGC	6 cut(s)	102, 209, 400, 424, 1721, 2058
CaiI	CAGNNNCTG	1 cut(s)	722
CciI	TCATGA	1 cut(s)	936
CfoI	GCGC	4 cut(s)	825, 1210, 1917, 1993
Cfr10I	RCCGGY	1 cut(s)	96
Cfr13I	GGNCC	3 cut(s)	35, 999, 1822
ClaI	ATCGAT	1 cut(s)	1946
CseI	GACGC	2 cut(s)	932, 1837
Csp6I	GTAC	5 cut(s)	11, 515, 1418, 2108, 2182
CspCI	CAANNNNNGTGG	2 cut(s)	1368, 1403
CviQI	GTAC	5 cut(s)	11, 515, 1418, 2108, 2182
DpnI	GATC	3 cut(s)	1800, 1862, 2132
DpnII	GATC	3 cut(s)	1798, 1860, 2130
DraI	TTTAAA	2 cut(s)	729, 1300
DraIII	CACNNNGTG	1 cut(s)	1453
DrdI	GACNNNNNNGTC	1 cut(s)	1834
DseDI	GACNNNNNNGTC	1 cut(s)	1834
EaeI	YGGCCR	2 cut(s)	646, 889
Eam1104I	CTCTTC	6 cut(s)	70, 906, 960, 1110, 1221, 2091
EarI	CTCTTC	6 cut(s)	70, 906, 960, 1110, 1221, 2091
EciI	GGCGGA	1 cut(s)	1748
Ecl136II	GAGCTC	2 cut(s)	7, 546
Eco130I	CCWWGG	5 cut(s)	31, 867, 1562, 1645, 2005
Eco24I	GRGCYC	2 cut(s)	9, 548
Eco47I	GGWCC	1 cut(s)	1822
Eco53kI	GAGCTC	2 cut(s)	7, 546
Eco57I	CTGAAG	6 cut(s)	624, 699, 1091, 1752, 2115, 2120
Eco72I	CACGTG	1 cut(s)	172
Eco81I	CCTNAGG	1 cut(s)	295
Eco88I	CYCGRG	1 cut(s)	131
EcoICRI	GAGCTC	2 cut(s)	7, 546
EcoO109I	RGGNCCY	1 cut(s)	1822
EcoRI	GAATTC	1 cut(s)	1247
EcoRII	CCWGG	1 cut(s)	1481
EcoT14I	CCWWGG	5 cut(s)	31, 867, 1562, 1645, 2005
EcoT22I	ATGCAT	1 cut(s)	2151
EcoT38I	GRGCYC	2 cut(s)	9, 548
ErhI	CCWWGG	5 cut(s)	31, 867, 1562, 1645, 2005
FalI	AAGNNNNNCTT	9 cut(s)	697, 729, 888, 920, 1515, 1547, 1725, 1757, 2292
FaqI	GGGAC	1 cut(s)	809
FauI	CCCGC	1 cut(s)	2163
FbaI	TGATCA	1 cut(s)	1860
FblI	GTMKAC	3 cut(s)	253, 1494, 2001
Fnu4HI	GCNGC	8 cut(s)	1194, 1232, 1661, 1808, 1989, 2078, 2081, 2166
FokI	GGATG	3 cut(s)	721, 1362, 2217
FriOI	GRGCYC	2 cut(s)	9, 548
Fsp4HI	GCNGC	8 cut(s)	1194, 1232, 1661, 1808, 1989, 2078, 2081, 2166
FspBI	CTAG	7 cut(s)	405, 672, 776, 1022, 1599, 1626, 1676
FspI	TGCGCA	1 cut(s)	1916
GlaI	GCGC	4 cut(s)	824, 1209, 1916, 1992
GluI	GCNGC	8 cut(s)	1194, 1232, 1661, 1808, 1989, 2078, 2081, 2166
GsaI	CCCAGC	1 cut(s)	1349
GsuI	CTGGAG	3 cut(s)	532, 1209, 1875
HaeIII	GGCC	8 cut(s)	36, 100, 648, 866, 891, 1001, 1888, 1975
HapII	CCGG	6 cut(s)	38, 71, 97, 1762, 1881, 1965
HgaI	GACGC	2 cut(s)	932, 1837
HhaI	GCGC	4 cut(s)	825, 1210, 1917, 1993
Hin1I	GRCGYC	2 cut(s)	924, 1829
Hin6I	GCGC	4 cut(s)	823, 1208, 1915, 1991
HinP1I	GCGC	4 cut(s)	823, 1208, 1915, 1991
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HindIII	AAGCTT	4 cut(s)	198, 497, 1062, 2193
HpaII	CCGG	6 cut(s)	38, 71, 97, 1762, 1881, 1965
HphI	GGTGA	8 cut(s)	85, 170, 547, 998, 1439, 1661, 1870, 2201
Hpy166II	GTNNAC	5 cut(s)	169, 254, 478, 1495, 2002
Hpy8I	GTNNAC	5 cut(s)	169, 254, 478, 1495, 2002
Hpy99I	CGWCG	2 cut(s)	87, 329
HpyCH4III	ACNGT	4 cut(s)	430, 600, 1357, 1748
HpyCH4IV	ACGT	5 cut(s)	85, 171, 221, 732, 2180
HpySE526I	ACGT	5 cut(s)	85, 171, 221, 732, 2180
Hsp92I	GRCGYC	2 cut(s)	924, 1829
HspAI	GCGC	4 cut(s)	823, 1208, 1915, 1991
Ksp22I	TGATCA	1 cut(s)	1860
Kzo9I	GATC	3 cut(s)	1798, 1860, 2130
LguI	GCTCTTC	2 cut(s)	1221, 2091
LmnI	GCTCC	6 cut(s)	4, 373, 509, 551, 583, 1190
Lsp1109I	GCAGC	7 cut(s)	1218, 1647, 1794, 2000, 2089, 2092, 2177
LweI	GCATC	8 cut(s)	625, 699, 797, 1384, 1450, 1952, 2269, 2272
MaeI	CTAG	7 cut(s)	405, 672, 776, 1022, 1599, 1626, 1676
MaeII	ACGT	5 cut(s)	85, 171, 221, 732, 2180
MaeIII	GTNAC	9 cut(s)	158, 334, 1445, 1453, 1726, 1790, 1876, 2208, 2255
MalI	GATC	3 cut(s)	1800, 1862, 2132
MbiI	CCGCTC	2 cut(s)	280, 1165
MboI	GATC	3 cut(s)	1798, 1860, 2130
MflI	RGATCY	1 cut(s)	1798
MhlI	GDGCHC	6 cut(s)	9, 171, 548, 580, 1036, 1606
MlsI	TGGCCA	1 cut(s)	648
MluNI	TGGCCA	1 cut(s)	648
MlyI	GAGTC	3 cut(s)	1525, 1824, 2263
MmeI	TCCRAC	3 cut(s)	106, 197, 683
Mox20I	TGGCCA	1 cut(s)	648
Mph1103I	ATGCAT	1 cut(s)	2151
MroXI	GAANNNNTTC	1 cut(s)	1149
MscI	TGGCCA	1 cut(s)	648
MseI	TTAA	4 cut(s)	417, 728, 900, 1299
MslI	CAYNNNNRTG	2 cut(s)	431, 533
Msp20I	TGGCCA	1 cut(s)	648
MspA1I	CMGCKG	1 cut(s)	2168
MspI	CCGG	6 cut(s)	38, 71, 97, 1762, 1881, 1965
MspR9I	CCNGG	3 cut(s)	38, 1483, 1763
Mva1269I	GAATGC	1 cut(s)	856
MvaI	CCWGG	1 cut(s)	1483
MvnI	CGCG	2 cut(s)	1993, 2223
NciI	CCSGG	2 cut(s)	38, 1763
NcoI	CCATGG	3 cut(s)	31, 1562, 1645
NdeII	GATC	3 cut(s)	1798, 1860, 2130
NlaIV	GGNNCC	3 cut(s)	1192, 1560, 1823
NmeAIII	GCCGAG	3 cut(s)	808, 917, 1055
NmuCI	GTSAC	6 cut(s)	158, 1445, 1453, 1726, 1876, 2255
NruI	TCGCGA	1 cut(s)	2223
NsbI	TGCGCA	1 cut(s)	1916
NsiI	ATGCAT	1 cut(s)	2151
NspI	RCATGY	3 cut(s)	623, 1281, 2090
PagI	TCATGA	1 cut(s)	936
PciI	ACATGT	1 cut(s)	619
PciSI	GCTCTTC	2 cut(s)	1221, 2091
PctI	GAATGC	1 cut(s)	856
PdmI	GAANNNNTTC	1 cut(s)	1149
PfeI	GAWTC	7 cut(s)	47, 719, 836, 933, 1174, 1679, 1955
Pfl23II	CGTACG	1 cut(s)	2181
PkrI	GCNGC	8 cut(s)	1195, 1233, 1662, 1809, 1990, 2079, 2082, 2167
PleI	GAGTC	3 cut(s)	1524, 1823, 2262
PmaCI	CACGTG	1 cut(s)	172
PmlI	CACGTG	1 cut(s)	172
PpsI	GAGTC	3 cut(s)	1524, 1823, 2262
Ppu21I	YACGTR	2 cut(s)	172, 2181
PpuMI	RGGWCCY	1 cut(s)	1822
PscI	ACATGT	1 cut(s)	619
PsiI	TTATAA	1 cut(s)	1332
Psp124BI	GAGCTC	2 cut(s)	9, 548
Psp1406I	AACGTT	1 cut(s)	732
Psp5II	RGGWCCY	1 cut(s)	1822
Psp6I	CCWGG	1 cut(s)	1481
PspCI	CACGTG	1 cut(s)	172
PspFI	CCCAGC	1 cut(s)	1345
PspGI	CCWGG	1 cut(s)	1481
PspLI	CGTACG	1 cut(s)	2181
PspN4I	GGNNCC	3 cut(s)	1192, 1560, 1823
PspPI	GGNCC	3 cut(s)	35, 999, 1822
PspPPI	RGGWCCY	1 cut(s)	1822
PstI	CTGCAG	2 cut(s)	1812, 1872
PstNI	CAGNNNCTG	1 cut(s)	722
PsuI	RGATCY	1 cut(s)	1798
PvuII	CAGCTG	1 cut(s)	2168
RruI	TCGCGA	1 cut(s)	2223
RsaI	GTAC	5 cut(s)	12, 516, 1419, 2109, 2183
RsaNI	GTAC	5 cut(s)	11, 515, 1418, 2108, 2182
RseI	CAYNNNNRTG	2 cut(s)	431, 533
SacI	GAGCTC	2 cut(s)	9, 548
SapI	GCTCTTC	2 cut(s)	1221, 2091
SaqAI	TTAA	4 cut(s)	417, 728, 900, 1299
SatI	GCNGC	8 cut(s)	1194, 1232, 1661, 1808, 1989, 2078, 2081, 2166
Sau3AI	GATC	3 cut(s)	1798, 1860, 2130
Sau96I	GGNCC	3 cut(s)	35, 999, 1822
SchI	GAGTC	3 cut(s)	1525, 1824, 2263
ScrFI	CCNGG	3 cut(s)	38, 1483, 1763
SduI	GDGCHC	6 cut(s)	9, 171, 548, 580, 1036, 1606
SfaNI	GCATC	8 cut(s)	625, 699, 797, 1384, 1450, 1952, 2269, 2272
SfcI	CTRYAG	2 cut(s)	1808, 1868
SinI	GGWCC	1 cut(s)	1822
SmiMI	CAYNNNNRTG	2 cut(s)	431, 533
SmlI	CTYRAG	1 cut(s)	928
SmoI	CTYRAG	1 cut(s)	928
SsiI	CCGC	7 cut(s)	26, 176, 278, 1165, 1194, 1759, 2156
SspI	AATATT	2 cut(s)	1012, 1549
SspMI	CTAG	7 cut(s)	405, 672, 776, 1022, 1599, 1626, 1676
SstI	GAGCTC	2 cut(s)	9, 548
StyD4I	CCNGG	3 cut(s)	36, 1481, 1761
StyI	CCWWGG	5 cut(s)	31, 867, 1562, 1645, 2005
TaaI	ACNGT	4 cut(s)	430, 600, 1357, 1748
TaiI	ACGT	5 cut(s)	88, 174, 224, 735, 2183
TaqI	TCGA	4 cut(s)	1048, 1094, 1750, 1946
TauI	GCSGC	1 cut(s)	1196
TfiI	GAWTC	7 cut(s)	47, 719, 836, 933, 1174, 1679, 1955
Tru1I	TTAA	4 cut(s)	417, 728, 900, 1299
Tru9I	TTAA	4 cut(s)	417, 728, 900, 1299
TscAI	CASTG	3 cut(s)	433, 1160, 1735
TseFI	GTSAC	6 cut(s)	158, 1445, 1453, 1726, 1876, 2255
TseI	GCWGC	7 cut(s)	1231, 1660, 1807, 1988, 2077, 2080, 2165
Tsp45I	GTSAC	6 cut(s)	158, 1445, 1453, 1726, 1876, 2255
TspDTI	ATGAA	8 cut(s)	248, 254, 258, 443, 462, 545, 863, 1074
TspGWI	ACGGA	3 cut(s)	379, 779, 1594
TspRI	CASTG	3 cut(s)	433, 1160, 1735
VneI	GTGCAC	1 cut(s)	167
VpaK11BI	GGWCC	1 cut(s)	1822
XapI	RAATTY	5 cut(s)	246, 450, 1083, 1247, 1936
XbaI	TCTAGA	3 cut(s)	404, 1021, 1625
XceI	RCATGY	3 cut(s)	623, 1281, 2090
XmiI	GTMKAC	3 cut(s)	253, 1494, 2001
XmnI	GAANNNNTTC	1 cut(s)	1149
XspI	CTAG	7 cut(s)	405, 672, 776, 1022, 1599, 1626, 1676
Zsp2I	ATGCAT	1 cut(s)	2151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.