Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0009672

Physical Location & Seq

Genomic Coordinates Forward (+)

70772977 .. 70777535

Gene Structure 4559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035717

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGGAGCTCATGCAGCCTTCACATCCTCCTCCACATCACGCCGGGGAACCCACTTCTGGGTTCTCATCTCCGGCGAGTTTTGCACGTGGGTTTGACTCGCCGGCCACTACTTCTCAGTTGCCGGAGATTTTTGAAGAAACTGGTGGTGGTGATGGTGGCTCTGACAAGGTACACGTGGCGGTTGGTAAGTCTGTGGAGAAAGCTGTGAGCTTGCTTCGTTGGAGTTTGAAGCAATTTGGTGGTAGAGAGATTTGTATACTTCATGTTCATCAACCTTCTCAGCTCATTCCAACTCTCTTAGGGAAACTACCTGCAAGTCAAGCAAATGCTGAAGTGGTGTGTGCTTTCAGGAGGGAGGAAAAGGAACAGAAAATGAAGCTTTTGCAAAGTTATTTGAGTATTTGCTGTAGAGAAAAGATTAAAGCAAGCATTGCGATGGTTGAAGCTGATGAAATTCAGAAAGGAATTGTAGAATCAGTGCACAGATATGGAGTTAGGAAGCTTGTTATGGGGACTGTACCAGAAAATTGCATGAAGGTGAAAAGGAGCTCCAGCAAAGCAAGTTATGCAGCCAAAAACGCTCCCTTGTTCTGTGAAATATGGTTTATCAACAAAGGGAAACCTCTATGGACAAGAGCTGCTTCGGAGGGCCAAAGTTCTCTGCCTTCCTGCAGTCAACAAATTGCATCTGAAGAAAGTTTTAAATCATTTCAACATAGAAAGAATGAGGGTTTTCACCCAGAGTGTCTCCAGTCCAGTTCTGCCAATAATGATTTTTCCAGAATCAGTAACTGCTTTCAGAGTGAATCAGTTCGGTCAGAAGCTGCTCAATCATCATCAACTTTATCTTGTTCTACCCATACATGCTTACCCCACAATATTCATAGTTCAACCAGAACAAGTTCTAGCTCTGGTTCAGGATATAGTTCTGCTGAGGGAAGGGTGTCATTAGATTCTGACTTATGTAGTAGGCTTACGGAAGCTACGCTAGAAGCTGAGGCATCGATGGAGAAGGCATCTTCAGAGCTATTGAAGTGCAAAAGATTAGAATCAGAAGCTATGGAAGCTATTGACAAGGTTAAAGCATTTGAGTTTGCCCATGCACGTGAAGTTAAACTTAGAACAGAGGCTGAGGATGCCCTGAGAACTACATTGGAGGAACAAGAAAAAATCATGGAGGAGAAGGAAGAACTTTCCACGAATATAAGGAATACCATGAGAAATATTGCTCTTCTAGATAGTCGAGTTCAGGAAGCAAATCGTAGGTCAGAGGAAGCTTCTGGAGAAGTAAAACAACTTCAGACTTCAATTGCAGCTCTCTGCCAAGAAAAACAGGGTATCCAACGACAGAAGATGGAAGCCCTCCGCTGGCTTGAACGGTGGAGAAGTCGTCGACATGCTGGAGCTGCGAACTACAATGGTCTCACTGGGTCTGTTGAAGAATTGCTCAAGCTGGCAGAATTTTCATTGTCAGATCTGCAAACTGCAACATGCAATTTTTCAGAGAGCTTTAAGATTGGGCAGGGAGGATATGGTTGTGTTTATAAGGGGGAAATGCTGGGAAGAACTGTTGCTATAAGGAAGCTACACCCTCATAACATGCAAGGACAATCAGAGTTTCAACAAGAGGTACAAGTTCTTTGTAAAATACAGCACCCTCATCTTGTGACCTTGCTTGGTGTGTGTCCAGAAGCCTGGTCCCTTGTGTACGAGTATTTACCAAATGGGAGCCTCCAAGACCATCTTTTCCGAAAAAGTAATGTTTCTTTCATGACATGGAAGACCCGAGTACGGATAGTTGCTGAAATCGCTAGTGCCCTTTGCTTCTTGCACTCTTCCAAACCTGAAAAGATTGTCCATGGTAATTTGAAGCTCCAAAACATACTACTCGATTCGGAACTCAGATGCAAGATTTGTGATTTTGGGATTTGCAGGCTGGTAACCGAGGAGAATCTCTACTCTGCAAGTTTCCGCCGGTTCACTGAACCAAAGGGTGCTTTTTCTTACACAGATCCAGAGCTTCAGAGAGTTGGAGTGTTGACACCCAAATCCGATATTTACTCCTTTGGGCTAATTATTCTGCAGTTAGTCACCAGAAGGCCTCCAGTTGGCTTAGCAAGTGAGGTGCGCAGAGCACTTCTGAGTGGAAATTTGACAGCAATTCTGGATTCATCAGCTGGAGAGTGGCCTGAATCCGTGGCAAAGCGATTGGTACAGCTTGGGTTGCAATGCTGTGAATTGAATAGTAGGGAAAGACCAGAGCTTACACCAGCTTTAGTAAGAGAATTCGAGCAGTTGCATGTCTCTGAAGAGCGATCTGTGCCATCCTTTTTTTTGTGTCCAATCCGTCAGGAAATAATGCATGACCCTCAGGTGGCAGCTGATGGCTTTACTTATGAAGGGGAAGCTCTGCTTAAATGGTTGCAAAATGGCGGCGAAACTTCTCCGATGACCAATTTGAAATTAAGTCACTTGCATCTCACTCCCAACCATGCCCTACGGCTTGCTATTCAAGATTGGCTTTGCAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

845

Amino Acids

94.07

Weight (kDa)

7.11

Isoelectric Point (pI)

58.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	503 - 759	1.8e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	505 - 756	4.9e-40	Protein tyrosine and serine/threonine kinase
U-box	PF04564	774 - 843	4e-18	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009672)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 FvH4_3g35970
malus_domestica	MD03G1095200.v1.1 MD11G1110200.v1.1
prunus_persica	Prupe.6G078700_v2.0.a1 Prupe.6G078700_v2.0.a1
pyrus_communis	pycom03g07770 pycom11g09100
rosa_chinensis	RchiOBHm_Chr5g0064331
rosa_laevigata	RLG00000035717
rosa_multiflora	Rmu_sc0000806.1_g000029
rosa_roxburghii	Rroxscaffold_1G00016670
rosa_rugosa	Rorug05G0364100 Rorug05G0364100
rosa_samantha	Rh5AG422200 Rh5BG438100 Rh5CG460600 Rh5DG451000
rosa_wichuraiana	Rw5G039740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1545
Acc16I	TGCGCA	1 cut(s)	2129
Acc36I	ACCTGC	1 cut(s)	319
AccI	GTMKAC	2 cut(s)	256, 1393
AciI	CCGC	4 cut(s)	179, 1366, 1972, 2433
AclWI	GGATC	1 cut(s)	2006
AcoI	YGGCCR	1 cut(s)	102
AcsI	RAATTY	4 cut(s)	453, 1460, 2149, 2285
AcuI	CTGAAG	6 cut(s)	351, 711, 1005, 1283, 2006, 2328
AcvI	CACGTG	3 cut(s)	86, 175, 1106
AfaI	GTAC	6 cut(s)	171, 519, 1632, 1709, 1791, 2214
AfiI	CCNNNNNNNGG	6 cut(s)	56, 57, 1368, 1791, 2108, 2374
AflIII	ACRYGT	1 cut(s)	172
AjnI	CCWGG	1 cut(s)	1694
Alw21I	GWGCWC	4 cut(s)	9, 483, 551, 2137
Alw26I	GTCTC	3 cut(s)	752, 1427, 2308
Alw44I	GTGCAC	1 cut(s)	479
AlwI	GGATC	1 cut(s)	2006
AlwNI	CAGNNNCTG	3 cut(s)	792, 824, 1130
Ama87I	CYCGRG	1 cut(s)	1785
AoxI	GGCC	4 cut(s)	102, 649, 2099, 2186
ApaLI	GTGCAC	1 cut(s)	479
ApeKI	GCWGC	7 cut(s)	13, 569, 638, 824, 1313, 1406, 2378
ApoI	RAATTY	4 cut(s)	453, 1460, 2149, 2285
ArsI	GACNNNNNNTTYG	2 cut(s)	1250, 1282
Asp700I	GAANNNNTTC	2 cut(s)	810, 901
AspLEI	GCGC	1 cut(s)	2130
AspS9I	GGNCC	2 cut(s)	649, 1698
AsuC2I	CCSGG	1 cut(s)	43
AsuHPI	GGTGA	4 cut(s)	161, 550, 728, 2083
AvaI	CYCGRG	1 cut(s)	1785
AvaII	GGWCC	1 cut(s)	1698
AxyI	CCTNAGG	1 cut(s)	2370
BaeGI	GKGCMC	2 cut(s)	483, 1819
BanII	GRGCYC	2 cut(s)	9, 551
BarI	GAAGNNNNNNTAC	2 cut(s)	1281, 1313
BbrPI	CACGTG	3 cut(s)	86, 175, 1106
BbsI	GAAGAC	1 cut(s)	1787
Bbv12I	GWGCWC	4 cut(s)	9, 483, 551, 2137
BbvCI	CCTCAGC	3 cut(s)	933, 996, 1131
BbvI	GCAGC	7 cut(s)	25, 581, 625, 811, 1325, 1393, 2390
BccI	CCATC	7 cut(s)	146, 430, 1000, 1348, 1749, 2332, 2378
BceAI	ACGGC	1 cut(s)	2516
BciT130I	CCWGG	1 cut(s)	1696
BciVI	GTATCC	1 cut(s)	1349
BcnI	CCSGG	1 cut(s)	43
BcoDI	GTCTC	3 cut(s)	752, 1427, 2308
BfaI	CTAG	4 cut(s)	906, 989, 1235, 1812
BfmI	CTRYAG	3 cut(s)	406, 670, 2081
BfuAI	ACCTGC	1 cut(s)	319
BfuI	GTATCC	1 cut(s)	1349
BglII	AGATCT	1 cut(s)	1474
BisI	GCNGC	8 cut(s)	14, 570, 639, 825, 1314, 1407, 2379, 2434
BlpI	GCTNAGC	1 cut(s)	2113
BlsI	GCNGC	8 cut(s)	15, 571, 640, 826, 1315, 1408, 2380, 2435
Bme1390I	CCNGG	2 cut(s)	43, 1696
Bme18I	GGWCC	1 cut(s)	1698
BmeT110I	CYCGRG	1 cut(s)	1785
BmgT120I	GGNCC	2 cut(s)	649, 1698
BmiI	GGNNCC	3 cut(s)	48, 1700, 1730
BmrFI	CCNGG	2 cut(s)	43, 1696
BmrI	ACTGGG	1 cut(s)	1437
BmsI	GCATC	6 cut(s)	695, 1010, 1025, 1126, 1895, 2485
BmuI	ACTGGG	1 cut(s)	1437
BpiI	GAAGAC	1 cut(s)	1787
BpmI	CTGGAG	6 cut(s)	535, 734, 1302, 1422, 2088, 2199
Bpu10I	CCTNAGC	3 cut(s)	933, 996, 1131
Bpu1102I	GCTNAGC	1 cut(s)	2113
BpuEI	CTTGAG	1 cut(s)	1433
BpuMI	CCSGG	1 cut(s)	43
Bsa29I	ATCGAT	1 cut(s)	1004
BsaAI	YACGTR	3 cut(s)	86, 175, 1106
BsaBI	GATNNNNATC	1 cut(s)	1048
BsaI	GGTCTC	1 cut(s)	1427
BsaJI	CCNNGG	4 cut(s)	42, 1858, 1944, 2196
BsaXI	ACNNNNNCTCC	2 cut(s)	1375, 1405
Bsc4I	CCNNNNNNNGG	6 cut(s)	56, 57, 1368, 1791, 2108, 2374
Bse118I	RCCGGY	2 cut(s)	100, 1974
Bse1I	ACTGG	5 cut(s)	145, 751, 756, 1432, 2105
Bse21I	CCTNAGG	1 cut(s)	2370
Bse3DI	GCAATG	2 cut(s)	429, 2234
Bse8I	GATNNNNATC	1 cut(s)	1048
BseBI	CCWGG	1 cut(s)	1696
BseCI	ATCGAT	1 cut(s)	1004
BseDI	CCNNGG	4 cut(s)	42, 1858, 1944, 2196
BseGI	GGATG	3 cut(s)	22, 1141, 2324
BseJI	GATNNNNATC	1 cut(s)	1048
BseLI	CCNNNNNNNGG	6 cut(s)	56, 57, 1368, 1791, 2108, 2374
BseMI	GCAATG	2 cut(s)	429, 2234
BseMII	CTCAG	9 cut(s)	128, 293, 924, 987, 1122, 1133, 1915, 2132, 2384
BseNI	ACTGG	5 cut(s)	145, 751, 756, 1432, 2105
BseRI	GAGGAG	3 cut(s)	18, 1193, 1961
BseSI	GKGCMC	2 cut(s)	483, 1819
BseXI	GCAGC	7 cut(s)	25, 581, 625, 811, 1325, 1393, 2390
BseYI	CCCAGC	1 cut(s)	1558
BshFI	GGCC	4 cut(s)	104, 651, 2101, 2188
BshVI	ATCGAT	1 cut(s)	1004
BsiHKAI	GWGCWC	4 cut(s)	9, 483, 551, 2137
BsiHKCI	CYCGRG	1 cut(s)	1785
BsiSI	CCGG	5 cut(s)	42, 71, 101, 122, 1975
BslFI	GGGAC	2 cut(s)	526, 1684
BslI	CCNNNNNNNGG	6 cut(s)	56, 57, 1368, 1791, 2108, 2374
BsmAI	GTCTC	3 cut(s)	752, 1427, 2308
BsmFI	GGGAC	2 cut(s)	526, 1684
BsnI	GGCC	4 cut(s)	104, 651, 2101, 2188
Bso31I	GGTCTC	1 cut(s)	1427
BsoBI	CYCGRG	1 cut(s)	1785
Bsp1286I	GDGCHC	5 cut(s)	9, 483, 551, 1819, 2137
Bsp143I	GATC	3 cut(s)	1474, 2011, 2315
Bsp1720I	GCTNAGC	1 cut(s)	2113
Bsp19I	CCATGG	1 cut(s)	1858
BspACI	CCGC	4 cut(s)	179, 1366, 1972, 2433
BspANI	GGCC	4 cut(s)	104, 651, 2101, 2188
BspCNI	CTCAG	9 cut(s)	127, 292, 925, 988, 1123, 1134, 1914, 2133, 2383
BspDI	ATCGAT	1 cut(s)	1004
BspHI	TCATGA	1 cut(s)	1770
BspLI	GGNNCC	3 cut(s)	48, 1700, 1730
BspMAI	CTGCAG	2 cut(s)	674, 2085
BspMI	ACCTGC	1 cut(s)	319
BspPI	GGATC	1 cut(s)	2006
BspQI	GCTCTTC	2 cut(s)	1236, 2304
BspTNI	GGTCTC	1 cut(s)	1427
BsrDI	GCAATG	2 cut(s)	429, 2234
BsrFI	RCCGGY	2 cut(s)	100, 1974
BsrI	ACTGG	5 cut(s)	145, 751, 756, 1432, 2105
BssAI	RCCGGY	2 cut(s)	100, 1974
BssECI	CCNNGG	4 cut(s)	42, 1858, 1944, 2196
BssMI	GATC	3 cut(s)	1474, 2011, 2315
BssNAI	GTATAC	1 cut(s)	257
BssT1I	CCWWGG	1 cut(s)	1858
Bst1107I	GTATAC	1 cut(s)	257
Bst2UI	CCWGG	1 cut(s)	1696
Bst4CI	ACNGT	3 cut(s)	517, 1380, 1570
Bst6I	CTCTTC	3 cut(s)	1236, 1840, 2304
BstAPI	GCANNNNNTGC	2 cut(s)	431, 566
BstBAI	YACGTR	3 cut(s)	86, 175, 1106
BstC8I	GCNNGC	7 cut(s)	102, 212, 427, 1370, 1455, 1934, 2505
BstDSI	CCRYGG	2 cut(s)	1858, 2196
BstEII	GGTNACC	1 cut(s)	1939
BstF5I	GGATG	3 cut(s)	22, 1141, 2324
BstHHI	GCGC	1 cut(s)	2130
BstKTI	GATC	3 cut(s)	1477, 2014, 2318
BstMAI	GTCTC	3 cut(s)	752, 1427, 2308
BstMBI	GATC	3 cut(s)	1474, 2011, 2315
BstNI	CCWGG	1 cut(s)	1696
BstNSI	RCATGY	5 cut(s)	867, 1400, 1494, 1603, 2303
BstPI	GGTNACC	1 cut(s)	1939
BstSCI	CCNGG	2 cut(s)	41, 1694
BstSFI	CTRYAG	3 cut(s)	406, 670, 2081
BstSLI	GKGCMC	2 cut(s)	483, 1819
BstV1I	GCAGC	7 cut(s)	25, 581, 625, 811, 1325, 1393, 2390
BstV2I	GAAGAC	1 cut(s)	1787
BstX2I	RGATCY	2 cut(s)	1474, 2011
BstXI	CCANNNNNNTGG	1 cut(s)	1695
BstYI	RGATCY	2 cut(s)	1474, 2011
BstZ17I	GTATAC	1 cut(s)	257
Bsu15I	ATCGAT	1 cut(s)	1004
Bsu36I	CCTNAGG	1 cut(s)	2370
BsuI	GTATCC	1 cut(s)	1349
BsuRI	GGCC	4 cut(s)	104, 651, 2101, 2188
BsuTUI	ATCGAT	1 cut(s)	1004
BtgI	CCRYGG	2 cut(s)	1858, 2196
BtgZI	GCGATG	1 cut(s)	449
BtsCI	GGATG	3 cut(s)	22, 1141, 2324
BtsIMutI	CAGTG	3 cut(s)	483, 1425, 1980
BveI	ACCTGC	1 cut(s)	319
Cac8I	GCNNGC	7 cut(s)	102, 212, 427, 1370, 1455, 1934, 2505
CaiI	CAGNNNCTG	3 cut(s)	792, 824, 1130
CciI	TCATGA	1 cut(s)	1770
CfoI	GCGC	1 cut(s)	2130
Cfr10I	RCCGGY	2 cut(s)	100, 1974
Cfr13I	GGNCC	2 cut(s)	649, 1698
ClaI	ATCGAT	1 cut(s)	1004
Csp6I	GTAC	6 cut(s)	170, 518, 1631, 1708, 1790, 2213
CviQI	GTAC	6 cut(s)	170, 518, 1631, 1708, 1790, 2213
DpnI	GATC	3 cut(s)	1476, 2013, 2317
DpnII	GATC	3 cut(s)	1474, 2011, 2315
DraI	TTTAAA	1 cut(s)	703
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	3 cut(s)	1236, 1840, 2304
EarI	CTCTTC	3 cut(s)	1236, 1840, 2304
EciI	GGCGGA	1 cut(s)	1961
Ecl136II	GAGCTC	2 cut(s)	7, 549
Eco130I	CCWWGG	1 cut(s)	1858
Eco147I	AGGCCT	1 cut(s)	2101
Eco24I	GRGCYC	2 cut(s)	9, 551
Eco31I	GGTCTC	1 cut(s)	1427
Eco47I	GGWCC	1 cut(s)	1698
Eco53kI	GAGCTC	2 cut(s)	7, 549
Eco57I	CTGAAG	6 cut(s)	351, 711, 1005, 1283, 2006, 2328
Eco72I	CACGTG	3 cut(s)	86, 175, 1106
Eco81I	CCTNAGG	1 cut(s)	2370
Eco88I	CYCGRG	1 cut(s)	1785
Eco91I	GGTNACC	1 cut(s)	1939
EcoICRI	GAGCTC	2 cut(s)	7, 549
EcoO65I	GGTNACC	1 cut(s)	1939
EcoRI	GAATTC	1 cut(s)	2285
EcoRII	CCWGG	1 cut(s)	1694
EcoT14I	CCWWGG	1 cut(s)	1858
EcoT22I	ATGCAT	1 cut(s)	2364
EcoT38I	GRGCYC	2 cut(s)	9, 551
ErhI	CCWWGG	1 cut(s)	1858
FalI	AAGNNNNNCTT	9 cut(s)	625, 657, 1101, 1133, 1728, 1760, 2397, 2429, 2505
FaqI	GGGAC	2 cut(s)	526, 1684
FblI	GTMKAC	2 cut(s)	256, 1393
Fnu4HI	GCNGC	8 cut(s)	14, 570, 639, 825, 1314, 1407, 2379, 2434
FokI	GGATG	3 cut(s)	9, 1148, 2311
FriOI	GRGCYC	2 cut(s)	9, 551
Fsp4HI	GCNGC	8 cut(s)	14, 570, 639, 825, 1314, 1407, 2379, 2434
FspBI	CTAG	4 cut(s)	906, 989, 1235, 1812
FspI	TGCGCA	1 cut(s)	2129
GlaI	GCGC	1 cut(s)	2129
GluI	GCNGC	8 cut(s)	14, 570, 639, 825, 1314, 1407, 2379, 2434
GsaI	CCCAGC	1 cut(s)	1562
GsuI	CTGGAG	6 cut(s)	535, 734, 1302, 1422, 2088, 2199
HaeIII	GGCC	4 cut(s)	104, 651, 2101, 2188
HapII	CCGG	5 cut(s)	42, 71, 101, 122, 1975
HhaI	GCGC	1 cut(s)	2130
Hin6I	GCGC	1 cut(s)	2128
HinP1I	GCGC	1 cut(s)	2128
HincII	GTYRAC	3 cut(s)	677, 1394, 2040
HindII	GTYRAC	3 cut(s)	677, 1394, 2040
HindIII	AAGCTT	3 cut(s)	377, 500, 1275
HpaII	CCGG	5 cut(s)	42, 71, 101, 122, 1975
HphI	GGTGA	4 cut(s)	161, 550, 728, 2083
Hpy166II	GTNNAC	8 cut(s)	172, 257, 481, 677, 1394, 1708, 1980, 2040
Hpy8I	GTNNAC	8 cut(s)	172, 257, 481, 677, 1394, 1708, 1980, 2040
Hpy99I	CGWCG	1 cut(s)	1395
HpyAV	CCTTC	9 cut(s)	27, 285, 529, 675, 933, 1006, 1177, 2091, 2393
HpyCH4III	ACNGT	3 cut(s)	517, 1380, 1570
HpyCH4IV	ACGT	3 cut(s)	85, 174, 1105
HpySE526I	ACGT	3 cut(s)	85, 174, 1105
HspAI	GCGC	1 cut(s)	2128
KroI	GCCGGC	1 cut(s)	100
KroNI	GCCGGC	1 cut(s)	102
Kzo9I	GATC	3 cut(s)	1474, 2011, 2315
LguI	GCTCTTC	2 cut(s)	1236, 2304
LmnI	GCTCC	7 cut(s)	4, 546, 554, 586, 1403, 1728, 1878
Lsp1109I	GCAGC	7 cut(s)	25, 581, 625, 811, 1325, 1393, 2390
LweI	GCATC	6 cut(s)	695, 1010, 1025, 1126, 1895, 2485
MaeI	CTAG	4 cut(s)	906, 989, 1235, 1812
MaeII	ACGT	3 cut(s)	85, 174, 1105
MaeIII	GTNAC	5 cut(s)	788, 1666, 1939, 2089, 2468
MalI	GATC	3 cut(s)	1476, 2013, 2317
MboI	GATC	3 cut(s)	1474, 2011, 2315
MfeI	CAATTG	1 cut(s)	1308
MflI	RGATCY	2 cut(s)	1474, 2011
MhlI	GDGCHC	5 cut(s)	9, 483, 551, 1819, 2137
MlyI	GAGTC	1 cut(s)	89
MmeI	TCCRAC	4 cut(s)	200, 314, 1366, 2011
Mph1103I	ATGCAT	1 cut(s)	2364
MroNI	GCCGGC	1 cut(s)	100
MroXI	GAANNNNTTC	2 cut(s)	810, 901
MseI	TTAA	7 cut(s)	420, 702, 1080, 1113, 1512, 2415, 2465
MslI	CAYNNNNRTG	4 cut(s)	434, 486, 536, 1104
MspA1I	CMGCKG	3 cut(s)	1368, 2177, 2381
MspI	CCGG	5 cut(s)	42, 71, 101, 122, 1975
MspR9I	CCNGG	2 cut(s)	43, 1696
MunI	CAATTG	1 cut(s)	1308
MvaI	CCWGG	1 cut(s)	1696
NaeI	GCCGGC	1 cut(s)	102
NciI	CCSGG	1 cut(s)	43
NcoI	CCATGG	1 cut(s)	1858
NdeII	GATC	3 cut(s)	1474, 2011, 2315
NgoMIV	GCCGGC	1 cut(s)	100
NlaIV	GGNNCC	3 cut(s)	48, 1700, 1730
NmuCI	GTSAC	3 cut(s)	1666, 2089, 2468
NsbI	TGCGCA	1 cut(s)	2129
NsiI	ATGCAT	1 cut(s)	2364
NspI	RCATGY	5 cut(s)	867, 1400, 1494, 1603, 2303
PagI	TCATGA	1 cut(s)	1770
PceI	AGGCCT	1 cut(s)	2101
PciSI	GCTCTTC	2 cut(s)	1236, 2304
PdiI	GCCGGC	1 cut(s)	102
PdmI	GAANNNNTTC	2 cut(s)	810, 901
PfeI	GAWTC	9 cut(s)	473, 783, 806, 953, 1049, 1892, 1951, 2168, 2192
PkrI	GCNGC	8 cut(s)	15, 571, 640, 826, 1315, 1408, 2380, 2435
PleI	GAGTC	1 cut(s)	89
PmaCI	CACGTG	3 cut(s)	86, 175, 1106
PmlI	CACGTG	3 cut(s)	86, 175, 1106
PpsI	GAGTC	1 cut(s)	89
Ppu21I	YACGTR	3 cut(s)	86, 175, 1106
PsiI	TTATAA	1 cut(s)	1545
Psp124BI	GAGCTC	2 cut(s)	9, 551
Psp6I	CCWGG	1 cut(s)	1694
PspCI	CACGTG	3 cut(s)	86, 175, 1106
PspEI	GGTNACC	1 cut(s)	1939
PspFI	CCCAGC	1 cut(s)	1558
PspGI	CCWGG	1 cut(s)	1694
PspN4I	GGNNCC	3 cut(s)	48, 1700, 1730
PspPI	GGNCC	2 cut(s)	649, 1698
PstI	CTGCAG	2 cut(s)	674, 2085
PstNI	CAGNNNCTG	3 cut(s)	792, 824, 1130
PsuI	RGATCY	2 cut(s)	1474, 2011
PvuII	CAGCTG	2 cut(s)	2177, 2381
RsaI	GTAC	6 cut(s)	171, 519, 1632, 1709, 1791, 2214
RsaNI	GTAC	6 cut(s)	170, 518, 1631, 1708, 1790, 2213
RseI	CAYNNNNRTG	4 cut(s)	434, 486, 536, 1104
SacI	GAGCTC	2 cut(s)	9, 551
SalI	GTCGAC	1 cut(s)	1392
SapI	GCTCTTC	2 cut(s)	1236, 2304
SaqAI	TTAA	7 cut(s)	420, 702, 1080, 1113, 1512, 2415, 2465
SatI	GCNGC	8 cut(s)	14, 570, 639, 825, 1314, 1407, 2379, 2434
Sau3AI	GATC	3 cut(s)	1474, 2011, 2315
Sau96I	GGNCC	2 cut(s)	649, 1698
SchI	GAGTC	1 cut(s)	89
ScrFI	CCNGG	2 cut(s)	43, 1696
SduI	GDGCHC	5 cut(s)	9, 483, 551, 1819, 2137
SfaNI	GCATC	6 cut(s)	695, 1010, 1025, 1126, 1895, 2485
SfcI	CTRYAG	3 cut(s)	406, 670, 2081
SinI	GGWCC	1 cut(s)	1698
SmiMI	CAYNNNNRTG	4 cut(s)	434, 486, 536, 1104
SmlI	CTYRAG	1 cut(s)	1448
SmoI	CTYRAG	1 cut(s)	1448
SseBI	AGGCCT	1 cut(s)	2101
SsiI	CCGC	4 cut(s)	179, 1366, 1972, 2433
SspI	AATATT	2 cut(s)	880, 1225
SspMI	CTAG	4 cut(s)	906, 989, 1235, 1812
SstI	GAGCTC	2 cut(s)	9, 551
StuI	AGGCCT	1 cut(s)	2101
StyD4I	CCNGG	2 cut(s)	41, 1694
StyI	CCWWGG	1 cut(s)	1858
TaaI	ACNGT	3 cut(s)	517, 1380, 1570
TaiI	ACGT	3 cut(s)	88, 177, 1108
TaqI	TCGA	5 cut(s)	1004, 1243, 1393, 1890, 2289
TaqII	GACCGA	1 cut(s)	804
TauI	GCSGC	1 cut(s)	2436
TfiI	GAWTC	9 cut(s)	473, 783, 806, 953, 1049, 1892, 1951, 2168, 2192
Tru1I	TTAA	7 cut(s)	420, 702, 1080, 1113, 1512, 2415, 2465
Tru9I	TTAA	7 cut(s)	420, 702, 1080, 1113, 1512, 2415, 2465
TscAI	CASTG	3 cut(s)	483, 1432, 1987
TseFI	GTSAC	3 cut(s)	1666, 2089, 2468
TseI	GCWGC	7 cut(s)	13, 569, 638, 824, 1313, 1406, 2378
Tsp45I	GTSAC	3 cut(s)	1666, 2089, 2468
TspGWI	ACGGA	4 cut(s)	992, 1807, 2185, 2336
TspRI	CASTG	3 cut(s)	483, 1432, 1987
VneI	GTGCAC	1 cut(s)	479
VpaK11BI	GGWCC	1 cut(s)	1698
XapI	RAATTY	4 cut(s)	453, 1460, 2149, 2285
XbaI	TCTAGA	1 cut(s)	1234
XceI	RCATGY	5 cut(s)	867, 1400, 1494, 1603, 2303
XmiI	GTMKAC	2 cut(s)	256, 1393
XmnI	GAANNNNTTC	2 cut(s)	810, 901
XspI	CTAG	4 cut(s)	906, 989, 1235, 1812
Zsp2I	ATGCAT	1 cut(s)	2364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.