U-box domain-containing protein 33-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 FvH4_3g35970 |
| malus_domestica | MD03G1095200.v1.1 MD11G1110200.v1.1 |
| prunus_persica | Prupe.6G078700_v2.0.a1 Prupe.6G078700_v2.0.a1 |
| pyrus_communis | pycom03g07770 pycom11g09100 |
| rosa_chinensis | RchiOBHm_Chr5g0064331 |
| rosa_laevigata | RLG00000035717 |
| rosa_multiflora | Rmu_sc0000806.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00016670 |
| rosa_rugosa | Rorug05G0364100 Rorug05G0364100 |
| rosa_samantha | Rh5AG422200 Rh5BG438100 Rh5CG460600 Rh5DG451000 |
| rosa_wichuraiana | Rw5G039740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1548 |
| Acc16I | TGCGCA | 1 cut(s) | 2132 |
| Acc36I | ACCTGC | 1 cut(s) | 319 |
| AccB1I | GGYRCC | 1 cut(s) | 2323 |
| AccBSI | CCGCTC | 1 cut(s) | 830 |
| AccI | GTMKAC | 2 cut(s) | 256, 1396 |
| AciI | CCGC | 3 cut(s) | 179, 828, 1975 |
| AclWI | GGATC | 1 cut(s) | 2009 |
| AcsI | RAATTY | 5 cut(s) | 453, 1299, 1463, 2152, 2288 |
| AcuI | CTGAAG | 4 cut(s) | 351, 714, 1008, 2331 |
| AcvI | CACGTG | 3 cut(s) | 86, 175, 1109 |
| AfaI | GTAC | 6 cut(s) | 171, 519, 1635, 1712, 1794, 2217 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 56, 57, 1371, 1794, 2111 |
| AflIII | ACRYGT | 1 cut(s) | 172 |
| AjnI | CCWGG | 1 cut(s) | 1697 |
| Alw21I | GWGCWC | 4 cut(s) | 9, 483, 551, 2140 |
| Alw26I | GTCTC | 3 cut(s) | 755, 1430, 2311 |
| Alw44I | GTGCAC | 1 cut(s) | 479 |
| AlwI | GGATC | 1 cut(s) | 2009 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 795, 1133 |
| Ama87I | CYCGRG | 1 cut(s) | 1788 |
| AoxI | GGCC | 3 cut(s) | 649, 2102, 2189 |
| ApaLI | GTGCAC | 1 cut(s) | 479 |
| ApeKI | GCWGC | 5 cut(s) | 13, 569, 638, 1316, 1409 |
| ApoI | RAATTY | 5 cut(s) | 453, 1299, 1463, 2152, 2288 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1253, 1285 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 813, 904 |
| AspLEI | GCGC | 1 cut(s) | 2133 |
| AspS9I | GGNCC | 2 cut(s) | 649, 1701 |
| AsuHPI | GGTGA | 5 cut(s) | 161, 550, 731, 2086, 2381 |
| AvaI | CYCGRG | 1 cut(s) | 1788 |
| AvaII | GGWCC | 1 cut(s) | 1701 |
| BaeGI | GKGCMC | 2 cut(s) | 483, 1822 |
| BanI | GGYRCC | 1 cut(s) | 2323 |
| BanII | GRGCYC | 2 cut(s) | 9, 551 |
| BbrPI | CACGTG | 3 cut(s) | 86, 175, 1109 |
| BbsI | GAAGAC | 1 cut(s) | 1790 |
| Bbv12I | GWGCWC | 4 cut(s) | 9, 483, 551, 2140 |
| BbvCI | CCTCAGC | 3 cut(s) | 936, 999, 1134 |
| BbvI | GCAGC | 5 cut(s) | 25, 581, 625, 1328, 1396 |
| BccI | CCATC | 5 cut(s) | 146, 430, 1351, 1752, 2335 |
| BciT130I | CCWGG | 1 cut(s) | 1699 |
| BciVI | GTATCC | 1 cut(s) | 1352 |
| BcoDI | GTCTC | 3 cut(s) | 755, 1430, 2311 |
| BfaI | CTAG | 5 cut(s) | 909, 992, 1238, 1815, 2406 |
| BfmI | CTRYAG | 1 cut(s) | 2084 |
| BfuAI | ACCTGC | 1 cut(s) | 319 |
| BfuI | GTATCC | 1 cut(s) | 1352 |
| BglII | AGATCT | 1 cut(s) | 1477 |
| BisI | GCNGC | 6 cut(s) | 14, 570, 639, 828, 1317, 1410 |
| BlpI | GCTNAGC | 1 cut(s) | 2116 |
| BlsI | GCNGC | 6 cut(s) | 15, 571, 640, 829, 1318, 1411 |
| Bme1390I | CCNGG | 1 cut(s) | 1699 |
| Bme18I | GGWCC | 1 cut(s) | 1701 |
| BmeT110I | CYCGRG | 1 cut(s) | 1788 |
| BmgT120I | GGNCC | 2 cut(s) | 649, 1701 |
| BmiI | GGNNCC | 3 cut(s) | 1703, 1733, 2325 |
| BmrFI | CCNGG | 1 cut(s) | 1699 |
| BmrI | ACTGGG | 1 cut(s) | 1440 |
| BmsI | GCATC | 5 cut(s) | 698, 1013, 1028, 1129, 1898 |
| BmuI | ACTGGG | 1 cut(s) | 1440 |
| BpiI | GAAGAC | 1 cut(s) | 1790 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1943, 1975 |
| BpmI | CTGGAG | 6 cut(s) | 535, 737, 1305, 1425, 2091, 2202 |
| Bpu10I | CCTNAGC | 3 cut(s) | 936, 999, 1134 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2116 |
| BpuEI | CTTGAG | 2 cut(s) | 1436, 2045 |
| BsaAI | YACGTR | 3 cut(s) | 86, 175, 1109 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1051 |
| BsaI | GGTCTC | 1 cut(s) | 1430 |
| BsaJI | CCNNGG | 3 cut(s) | 1861, 1947, 2199 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1378, 1408 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 56, 57, 1371, 1794, 2111 |
| Bse118I | RCCGGY | 3 cut(s) | 41, 100, 1977 |
| Bse1I | ACTGG | 6 cut(s) | 145, 754, 759, 1435, 2108, 2371 |
| Bse3DI | GCAATG | 2 cut(s) | 429, 2237 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1051 |
| BseBI | CCWGG | 1 cut(s) | 1699 |
| BseDI | CCNNGG | 3 cut(s) | 1861, 1947, 2199 |
| BseGI | GGATG | 3 cut(s) | 22, 1144, 2327 |
| BseJI | GATNNNNATC | 1 cut(s) | 1051 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 56, 57, 1371, 1794, 2111 |
| BseMI | GCAATG | 2 cut(s) | 429, 2237 |
| BseMII | CTCAG | 8 cut(s) | 128, 293, 927, 990, 1125, 1136, 1918, 2135 |
| BseNI | ACTGG | 6 cut(s) | 145, 754, 759, 1435, 2108, 2371 |
| BseRI | GAGGAG | 3 cut(s) | 18, 1196, 1964 |
| BseSI | GKGCMC | 2 cut(s) | 483, 1822 |
| BseXI | GCAGC | 5 cut(s) | 25, 581, 625, 1328, 1396 |
| BseYI | CCCAGC | 1 cut(s) | 1561 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2321 |
| BshFI | GGCC | 3 cut(s) | 651, 2104, 2191 |
| BshNI | GGYRCC | 1 cut(s) | 2323 |
| BsiEI | CGRYCG | 1 cut(s) | 2321 |
| BsiHKAI | GWGCWC | 4 cut(s) | 9, 483, 551, 2140 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1788 |
| BsiSI | CCGG | 5 cut(s) | 42, 71, 101, 122, 1978 |
| BslFI | GGGAC | 1 cut(s) | 1687 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 56, 57, 1371, 1794, 2111 |
| BsmAI | GTCTC | 3 cut(s) | 755, 1430, 2311 |
| BsmFI | GGGAC | 1 cut(s) | 1687 |
| BsnI | GGCC | 3 cut(s) | 651, 2104, 2191 |
| Bso31I | GGTCTC | 1 cut(s) | 1430 |
| BsoBI | CYCGRG | 1 cut(s) | 1788 |
| Bsp1286I | GDGCHC | 5 cut(s) | 9, 483, 551, 1822, 2140 |
| Bsp143I | GATC | 3 cut(s) | 1477, 2014, 2318 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2116 |
| Bsp19I | CCATGG | 1 cut(s) | 1861 |
| BspACI | CCGC | 3 cut(s) | 179, 828, 1975 |
| BspANI | GGCC | 3 cut(s) | 651, 2104, 2191 |
| BspCNI | CTCAG | 8 cut(s) | 127, 292, 928, 991, 1126, 1137, 1917, 2136 |
| BspHI | TCATGA | 1 cut(s) | 1773 |
| BspLI | GGNNCC | 3 cut(s) | 1703, 1733, 2325 |
| BspMAI | CTGCAG | 1 cut(s) | 2088 |
| BspMI | ACCTGC | 1 cut(s) | 319 |
| BspPI | GGATC | 1 cut(s) | 2009 |
| BspQI | GCTCTTC | 2 cut(s) | 1239, 2307 |
| BspT107I | GGYRCC | 1 cut(s) | 2323 |
| BspTNI | GGTCTC | 1 cut(s) | 1430 |
| BsrBI | CCGCTC | 1 cut(s) | 830 |
| BsrDI | GCAATG | 2 cut(s) | 429, 2237 |
| BsrFI | RCCGGY | 3 cut(s) | 41, 100, 1977 |
| BsrI | ACTGG | 6 cut(s) | 145, 754, 759, 1435, 2108, 2371 |
| BssAI | RCCGGY | 3 cut(s) | 41, 100, 1977 |
| BssECI | CCNNGG | 3 cut(s) | 1861, 1947, 2199 |
| BssMI | GATC | 3 cut(s) | 1477, 2014, 2318 |
| BssNAI | GTATAC | 1 cut(s) | 257 |
| BssT1I | CCWWGG | 1 cut(s) | 1861 |
| Bst1107I | GTATAC | 1 cut(s) | 257 |
| Bst2UI | CCWGG | 1 cut(s) | 1699 |
| Bst4CI | ACNGT | 3 cut(s) | 1383, 1573, 2249 |
| Bst6I | CTCTTC | 4 cut(s) | 1239, 1843, 1966, 2307 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 431, 566 |
| BstBAI | YACGTR | 3 cut(s) | 86, 175, 1109 |
| BstC8I | GCNNGC | 7 cut(s) | 43, 102, 212, 427, 1373, 1458, 1937 |
| BstDSI | CCRYGG | 2 cut(s) | 1861, 2199 |
| BstEII | GGTNACC | 1 cut(s) | 1942 |
| BstF5I | GGATG | 3 cut(s) | 22, 1144, 2327 |
| BstHHI | GCGC | 1 cut(s) | 2133 |
| BstKTI | GATC | 3 cut(s) | 1480, 2017, 2321 |
| BstMAI | GTCTC | 3 cut(s) | 755, 1430, 2311 |
| BstMBI | GATC | 3 cut(s) | 1477, 2014, 2318 |
| BstMCI | CGRYCG | 1 cut(s) | 2321 |
| BstNI | CCWGG | 1 cut(s) | 1699 |
| BstNSI | RCATGY | 4 cut(s) | 870, 1497, 1606, 2306 |
| BstPI | GGTNACC | 1 cut(s) | 1942 |
| BstSCI | CCNGG | 1 cut(s) | 1697 |
| BstSFI | CTRYAG | 1 cut(s) | 2084 |
| BstSLI | GKGCMC | 2 cut(s) | 483, 1822 |
| BstV1I | GCAGC | 5 cut(s) | 25, 581, 625, 1328, 1396 |
| BstV2I | GAAGAC | 1 cut(s) | 1790 |
| BstX2I | RGATCY | 2 cut(s) | 1477, 2014 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1698 |
| BstYI | RGATCY | 2 cut(s) | 1477, 2014 |
| BstZ17I | GTATAC | 1 cut(s) | 257 |
| BsuI | GTATCC | 1 cut(s) | 1352 |
| BsuRI | GGCC | 3 cut(s) | 651, 2104, 2191 |
| BtgI | CCRYGG | 2 cut(s) | 1861, 2199 |
| BtgZI | GCGATG | 1 cut(s) | 449 |
| BtsCI | GGATG | 3 cut(s) | 22, 1144, 2327 |
| BtsIMutI | CAGTG | 3 cut(s) | 483, 1428, 1983 |
| BveI | ACCTGC | 1 cut(s) | 319 |
| Cac8I | GCNNGC | 7 cut(s) | 43, 102, 212, 427, 1373, 1458, 1937 |
| CaiI | CAGNNNCTG | 2 cut(s) | 795, 1133 |
| CciI | TCATGA | 1 cut(s) | 1773 |
| CfoI | GCGC | 1 cut(s) | 2133 |
| Cfr10I | RCCGGY | 3 cut(s) | 41, 100, 1977 |
| Cfr13I | GGNCC | 2 cut(s) | 649, 1701 |
| Csp6I | GTAC | 6 cut(s) | 170, 518, 1634, 1711, 1793, 2216 |
| CviQI | GTAC | 6 cut(s) | 170, 518, 1634, 1711, 1793, 2216 |
| DpnI | GATC | 3 cut(s) | 1479, 2016, 2320 |
| DpnII | GATC | 3 cut(s) | 1477, 2014, 2318 |
| DraI | TTTAAA | 1 cut(s) | 706 |
| Eam1104I | CTCTTC | 4 cut(s) | 1239, 1843, 1966, 2307 |
| EarI | CTCTTC | 4 cut(s) | 1239, 1843, 1966, 2307 |
| EciI | GGCGGA | 1 cut(s) | 1964 |
| Ecl136II | GAGCTC | 2 cut(s) | 7, 549 |
| Eco130I | CCWWGG | 1 cut(s) | 1861 |
| Eco147I | AGGCCT | 1 cut(s) | 2104 |
| Eco24I | GRGCYC | 2 cut(s) | 9, 551 |
| Eco31I | GGTCTC | 1 cut(s) | 1430 |
| Eco47I | GGWCC | 1 cut(s) | 1701 |
| Eco53kI | GAGCTC | 2 cut(s) | 7, 549 |
| Eco57I | CTGAAG | 4 cut(s) | 351, 714, 1008, 2331 |
| Eco72I | CACGTG | 3 cut(s) | 86, 175, 1109 |
| Eco88I | CYCGRG | 1 cut(s) | 1788 |
| Eco91I | GGTNACC | 1 cut(s) | 1942 |
| EcoICRI | GAGCTC | 2 cut(s) | 7, 549 |
| EcoO65I | GGTNACC | 1 cut(s) | 1942 |
| EcoRI | GAATTC | 2 cut(s) | 1463, 2288 |
| EcoRII | CCWGG | 1 cut(s) | 1697 |
| EcoT14I | CCWWGG | 1 cut(s) | 1861 |
| EcoT38I | GRGCYC | 2 cut(s) | 9, 551 |
| ErhI | CCWWGG | 1 cut(s) | 1861 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 625, 657, 934, 966, 1104, 1136, 1731, 1763 |
| FaqI | GGGAC | 1 cut(s) | 1687 |
| FblI | GTMKAC | 2 cut(s) | 256, 1396 |
| Fnu4HI | GCNGC | 6 cut(s) | 14, 570, 639, 828, 1317, 1410 |
| FokI | GGATG | 3 cut(s) | 9, 1151, 2314 |
| FriOI | GRGCYC | 2 cut(s) | 9, 551 |
| Fsp4HI | GCNGC | 6 cut(s) | 14, 570, 639, 828, 1317, 1410 |
| FspBI | CTAG | 5 cut(s) | 909, 992, 1238, 1815, 2406 |
| FspI | TGCGCA | 1 cut(s) | 2132 |
| GlaI | GCGC | 1 cut(s) | 2132 |
| GluI | GCNGC | 6 cut(s) | 14, 570, 639, 828, 1317, 1410 |
| GsaI | CCCAGC | 1 cut(s) | 1565 |
| GsuI | CTGGAG | 6 cut(s) | 535, 737, 1305, 1425, 2091, 2202 |
| HaeIII | GGCC | 3 cut(s) | 651, 2104, 2191 |
| HapII | CCGG | 5 cut(s) | 42, 71, 101, 122, 1978 |
| HhaI | GCGC | 1 cut(s) | 2133 |
| Hin6I | GCGC | 1 cut(s) | 2131 |
| HinP1I | GCGC | 1 cut(s) | 2131 |
| HincII | GTYRAC | 3 cut(s) | 677, 1397, 2043 |
| HindII | GTYRAC | 3 cut(s) | 677, 1397, 2043 |
| HindIII | AAGCTT | 2 cut(s) | 377, 1278 |
| HpaII | CCGG | 5 cut(s) | 42, 71, 101, 122, 1978 |
| HphI | GGTGA | 5 cut(s) | 161, 550, 731, 2086, 2381 |
| Hpy166II | GTNNAC | 8 cut(s) | 172, 257, 481, 677, 1397, 1711, 1983, 2043 |
| Hpy8I | GTNNAC | 8 cut(s) | 172, 257, 481, 677, 1397, 1711, 1983, 2043 |
| Hpy99I | CGWCG | 1 cut(s) | 1398 |
| HpyAV | CCTTC | 8 cut(s) | 27, 285, 529, 675, 936, 1009, 1180, 2094 |
| HpyCH4III | ACNGT | 3 cut(s) | 1383, 1573, 2249 |
| HpyCH4IV | ACGT | 3 cut(s) | 85, 174, 1108 |
| HpySE526I | ACGT | 3 cut(s) | 85, 174, 1108 |
| HspAI | GCGC | 1 cut(s) | 2131 |
| KroI | GCCGGC | 2 cut(s) | 41, 100 |
| KroNI | GCCGGC | 2 cut(s) | 43, 102 |
| Kzo9I | GATC | 3 cut(s) | 1477, 2014, 2318 |
| LguI | GCTCTTC | 2 cut(s) | 1239, 2307 |
| LmnI | GCTCC | 6 cut(s) | 4, 546, 554, 586, 1406, 1731 |
| Lsp1109I | GCAGC | 5 cut(s) | 25, 581, 625, 1328, 1396 |
| LweI | GCATC | 5 cut(s) | 698, 1013, 1028, 1129, 1898 |
| MaeI | CTAG | 5 cut(s) | 909, 992, 1238, 1815, 2406 |
| MaeII | ACGT | 3 cut(s) | 85, 174, 1108 |
| MaeIII | GTNAC | 5 cut(s) | 791, 1669, 1942, 2060, 2092 |
| MalI | GATC | 3 cut(s) | 1479, 2016, 2320 |
| MbiI | CCGCTC | 1 cut(s) | 830 |
| MboI | GATC | 3 cut(s) | 1477, 2014, 2318 |
| MfeI | CAATTG | 1 cut(s) | 1311 |
| MflI | RGATCY | 2 cut(s) | 1477, 2014 |
| MhlI | GDGCHC | 5 cut(s) | 9, 483, 551, 1822, 2140 |
| MlyI | GAGTC | 2 cut(s) | 89, 406 |
| MmeI | TCCRAC | 4 cut(s) | 200, 314, 1369, 2014 |
| MreI | CGCCGGCG | 1 cut(s) | 41 |
| MroNI | GCCGGC | 2 cut(s) | 41, 100 |
| MroXI | GAANNNNTTC | 2 cut(s) | 813, 904 |
| MseI | TTAA | 5 cut(s) | 420, 705, 1083, 1116, 1515 |
| MslI | CAYNNNNRTG | 4 cut(s) | 434, 486, 536, 1107 |
| MspA1I | CMGCKG | 1 cut(s) | 2180 |
| MspI | CCGG | 5 cut(s) | 42, 71, 101, 122, 1978 |
| MspR9I | CCNGG | 1 cut(s) | 1699 |
| MunI | CAATTG | 1 cut(s) | 1311 |
| MvaI | CCWGG | 1 cut(s) | 1699 |
| NaeI | GCCGGC | 2 cut(s) | 43, 102 |
| NcoI | CCATGG | 1 cut(s) | 1861 |
| NdeII | GATC | 3 cut(s) | 1477, 2014, 2318 |
| NgoMIV | GCCGGC | 2 cut(s) | 41, 100 |
| NlaIV | GGNNCC | 3 cut(s) | 1703, 1733, 2325 |
| NmuCI | GTSAC | 2 cut(s) | 1669, 2092 |
| NsbI | TGCGCA | 1 cut(s) | 2132 |
| NspI | RCATGY | 4 cut(s) | 870, 1497, 1606, 2306 |
| PagI | TCATGA | 1 cut(s) | 1773 |
| PceI | AGGCCT | 1 cut(s) | 2104 |
| PciSI | GCTCTTC | 2 cut(s) | 1239, 2307 |
| PdiI | GCCGGC | 2 cut(s) | 43, 102 |
| PdmI | GAANNNNTTC | 2 cut(s) | 813, 904 |
| PfeI | GAWTC | 9 cut(s) | 473, 786, 809, 956, 1052, 1895, 1954, 2171, 2195 |
| PkrI | GCNGC | 6 cut(s) | 15, 571, 640, 829, 1318, 1411 |
| Ple19I | CGATCG | 1 cut(s) | 2321 |
| PleI | GAGTC | 2 cut(s) | 89, 405 |
| PmaCI | CACGTG | 3 cut(s) | 86, 175, 1109 |
| PmlI | CACGTG | 3 cut(s) | 86, 175, 1109 |
| PpsI | GAGTC | 2 cut(s) | 89, 405 |
| Ppu21I | YACGTR | 3 cut(s) | 86, 175, 1109 |
| PsiI | TTATAA | 1 cut(s) | 1548 |
| Psp124BI | GAGCTC | 2 cut(s) | 9, 551 |
| Psp6I | CCWGG | 1 cut(s) | 1697 |
| PspCI | CACGTG | 3 cut(s) | 86, 175, 1109 |
| PspEI | GGTNACC | 1 cut(s) | 1942 |
| PspFI | CCCAGC | 1 cut(s) | 1561 |
| PspGI | CCWGG | 1 cut(s) | 1697 |
| PspN4I | GGNNCC | 3 cut(s) | 1703, 1733, 2325 |
| PspPI | GGNCC | 2 cut(s) | 649, 1701 |
| PstI | CTGCAG | 1 cut(s) | 2088 |
| PstNI | CAGNNNCTG | 2 cut(s) | 795, 1133 |
| PsuI | RGATCY | 2 cut(s) | 1477, 2014 |
| PvuI | CGATCG | 1 cut(s) | 2321 |
| PvuII | CAGCTG | 1 cut(s) | 2180 |
| RsaI | GTAC | 6 cut(s) | 171, 519, 1635, 1712, 1794, 2217 |
| RsaNI | GTAC | 6 cut(s) | 170, 518, 1634, 1711, 1793, 2216 |
| RseI | CAYNNNNRTG | 4 cut(s) | 434, 486, 536, 1107 |
| SacI | GAGCTC | 2 cut(s) | 9, 551 |
| SalI | GTCGAC | 1 cut(s) | 1395 |
| SapI | GCTCTTC | 2 cut(s) | 1239, 2307 |
| SaqAI | TTAA | 5 cut(s) | 420, 705, 1083, 1116, 1515 |
| SatI | GCNGC | 6 cut(s) | 14, 570, 639, 828, 1317, 1410 |
| Sau3AI | GATC | 3 cut(s) | 1477, 2014, 2318 |
| Sau96I | GGNCC | 2 cut(s) | 649, 1701 |
| SchI | GAGTC | 2 cut(s) | 89, 406 |
| ScrFI | CCNGG | 1 cut(s) | 1699 |
| SduI | GDGCHC | 5 cut(s) | 9, 483, 551, 1822, 2140 |
| SfaNI | GCATC | 5 cut(s) | 698, 1013, 1028, 1129, 1898 |
| SfcI | CTRYAG | 1 cut(s) | 2084 |
| SgrAI | CRCCGGYG | 1 cut(s) | 41 |
| SinI | GGWCC | 1 cut(s) | 1701 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 434, 486, 536, 1107 |
| SmlI | CTYRAG | 2 cut(s) | 1451, 2024 |
| SmoI | CTYRAG | 2 cut(s) | 1451, 2024 |
| SseBI | AGGCCT | 1 cut(s) | 2104 |
| SsiI | CCGC | 3 cut(s) | 179, 828, 1975 |
| SspI | AATATT | 2 cut(s) | 883, 1228 |
| SspMI | CTAG | 5 cut(s) | 909, 992, 1238, 1815, 2406 |
| SstI | GAGCTC | 2 cut(s) | 9, 551 |
| StuI | AGGCCT | 1 cut(s) | 2104 |
| StyD4I | CCNGG | 1 cut(s) | 1697 |
| StyI | CCWWGG | 1 cut(s) | 1861 |
| TaaI | ACNGT | 3 cut(s) | 1383, 1573, 2249 |
| TaiI | ACGT | 3 cut(s) | 88, 177, 1111 |
| TaqI | TCGA | 5 cut(s) | 1007, 1246, 1396, 1893, 2292 |
| TaqII | GACCGA | 1 cut(s) | 807 |
| TauI | GCSGC | 1 cut(s) | 830 |
| TfiI | GAWTC | 9 cut(s) | 473, 786, 809, 956, 1052, 1895, 1954, 2171, 2195 |
| Tru1I | TTAA | 5 cut(s) | 420, 705, 1083, 1116, 1515 |
| Tru9I | TTAA | 5 cut(s) | 420, 705, 1083, 1116, 1515 |
| TscAI | CASTG | 3 cut(s) | 483, 1435, 1990 |
| TseFI | GTSAC | 2 cut(s) | 1669, 2092 |
| TseI | GCWGC | 5 cut(s) | 13, 569, 638, 1316, 1409 |
| Tsp45I | GTSAC | 2 cut(s) | 1669, 2092 |
| TspGWI | ACGGA | 4 cut(s) | 995, 1810, 2188, 2339 |
| TspRI | CASTG | 3 cut(s) | 483, 1435, 1990 |
| VneI | GTGCAC | 1 cut(s) | 479 |
| VpaK11BI | GGWCC | 1 cut(s) | 1701 |
| XapI | RAATTY | 5 cut(s) | 453, 1299, 1463, 2152, 2288 |
| XbaI | TCTAGA | 1 cut(s) | 1237 |
| XceI | RCATGY | 4 cut(s) | 870, 1497, 1606, 2306 |
| XmiI | GTMKAC | 2 cut(s) | 256, 1396 |
| XmnI | GAANNNNTTC | 2 cut(s) | 813, 904 |
| XspI | CTAG | 5 cut(s) | 909, 992, 1238, 1815, 2406 |