pycom11g10400
WRKY Family

protease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0015301
Physical Location & Seq
Forward (+)
8819133 .. 8819807
675 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g10400.1

Sequence Viewer

Length: 675 bp
ATGGGAAAACCCAATCCTGATGAAAAGATTCTCAGCTACAATGATGTTGTACTCAGACGATCAGACTTGGTTGTCCTCAGTGGCCCGTATTTTCTCAATGATCGACTCATCGAGTTTTATTTCAGTTATCTGTCATCATGCTCTGAGGAGATATTACTCATTCCACCTTCAATTGCATTCTGGATGATGAATGCAGTTGGTCAAGGCCTCCACGAGTTCCTGGTACCTCTTAATTTGCCGGATAAAAAACTGGTAATCTTTCCAGTCAATGACAATGAGGATGTGAGTGAAGCTGGAGGTGGGTCTCACTGGAGCCTACTTGCATTTGAGAGAGATTCTAACGTCTTTGTTCATCATGATAGCAATGGAGGGATGAATAGAAGGCACGCTAAAAAACTGTATGATGCAGTTGTTGACTTCATGAGTGTCTCCAGTTCAGCAACCAAGCCCAGTTATCAAGAGTGTAGTGATTCACCGCAACAAGTAAATGGTTATGATTGTGGCTTGTATGTGTTGGCTATTGCAAGGGTTATATGCAGCTGGTACGGAAATAAAGACACAGGTGAACGGAATTTGTGGTTCCATGATGTGCGCGAGCAGGTCACTCCATCTGTTGTTGCTGCAATGCGAAACGAGATCCTGGAGCTGATCAGAGGTCTCATGCTCGTGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0016787 GO:0019538 GO:0019783 GO:0019784 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 WRKY

Protein Analysis

225

Amino Acids

25.27

Weight (kDa)

5.21

Isoelectric Point (pI)

50.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 64 - 177 3.3e-12 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015301)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60190
fragaria_vesca FvH4_3g33710
malus_domestica MD09G1211300.v1.1 MD11G1123000.v1.1
prunus_persica Prupe.6G092400_v2.0.a1
pyrus_communis pycom11g10400
rosa_chinensis RchiOBHm_Chr5g0061241
rosa_laevigata RLG00000035445
rosa_multiflora Rmu_sc0007612.1_g000045
rosa_roxburghii Rroxscaffold_1G00019460
rosa_rugosa Rorug05G0339100
rosa_samantha Rh5AG400200 Rh5BG413200 Rh5CG437700 Rh5DG427400
rosa_wichuraiana Rw5G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 71
Acc36I ACCTGC 1 cut(s) 589
Acc65I GGTACC 1 cut(s) 223
AccB1I GGYRCC 1 cut(s) 223
AccII CGCG 1 cut(s) 594
AciI CCGC 1 cut(s) 476
AclWI GGATC 1 cut(s) 631
AcsI RAATTY 1 cut(s) 571
AfaI GTAC 3 cut(s) 51, 225, 545
AgsI TTSAA 1 cut(s) 171
AjnI CCWGG 2 cut(s) 219, 639
AluBI AGCT 4 cut(s) 36, 293, 540, 646
AluI AGCT 4 cut(s) 36, 293, 540, 646
Alw26I GTCTC 3 cut(s) 309, 433, 662
AlwI GGATC 1 cut(s) 631
AoxI GGCC 2 cut(s) 82, 205
ApeKI GCWGC 2 cut(s) 537, 620
ApoI RAATTY 1 cut(s) 571
Asp700I GAANNNNTTC 1 cut(s) 27
Asp718I GGTACC 1 cut(s) 223
AspLEI GCGC 1 cut(s) 594
AspS9I GGNCC 1 cut(s) 83
AsuHPI GGTGA 2 cut(s) 465, 575
BanI GGYRCC 1 cut(s) 223
BauI CACGAG 2 cut(s) 212, 665
BbvI GCAGC 2 cut(s) 549, 607
BccI CCATC 1 cut(s) 616
BciT130I CCWGG 2 cut(s) 221, 641
BclI TGATCA 1 cut(s) 648
BcoDI GTCTC 3 cut(s) 309, 433, 662
BfuAI ACCTGC 1 cut(s) 589
BisI GCNGC 2 cut(s) 538, 621
BlsI GCNGC 2 cut(s) 539, 622
Bme1390I CCNGG 2 cut(s) 221, 641
BmgT120I GGNCC 1 cut(s) 83
BmiI GGNNCC 3 cut(s) 225, 314, 581
BmrFI CCNGG 2 cut(s) 221, 641
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 1 cut(s) 394
BmuI ACTGGG 1 cut(s) 444
BpmI CTGGAG 4 cut(s) 315, 331, 415, 662
BsaI GGTCTC 2 cut(s) 309, 662
Bse1I ACTGG 5 cut(s) 255, 263, 314, 432, 450
Bse3DI GCAATG 2 cut(s) 370, 630
BseBI CCWGG 2 cut(s) 221, 641
BseGI GGATG 3 cut(s) 189, 286, 378
BseMI GCAATG 2 cut(s) 370, 630
BseMII CTCAG 4 cut(s) 46, 67, 91, 135
BseNI ACTGG 5 cut(s) 255, 263, 314, 432, 450
BseRI GAGGAG 1 cut(s) 161
BseXI GCAGC 2 cut(s) 549, 607
Bsh1236I CGCG 1 cut(s) 594
BshFI GGCC 2 cut(s) 84, 207
BshNI GGYRCC 1 cut(s) 223
BsiSI CCGG 1 cut(s) 239
BsmAI GTCTC 3 cut(s) 309, 433, 662
BsmI GAATGC 2 cut(s) 176, 196
BsnI GGCC 2 cut(s) 84, 207
Bso31I GGTCTC 2 cut(s) 309, 662
Bsp143I GATC 4 cut(s) 59, 100, 636, 648
BspACI CCGC 1 cut(s) 476
BspANI GGCC 2 cut(s) 84, 207
BspCNI CTCAG 4 cut(s) 45, 66, 90, 136
BspFNI CGCG 1 cut(s) 594
BspHI TCATGA 2 cut(s) 355, 420
BspLI GGNNCC 3 cut(s) 225, 314, 581
BspMI ACCTGC 1 cut(s) 589
BspPI GGATC 1 cut(s) 631
BspT107I GGYRCC 1 cut(s) 223
BspTNI GGTCTC 2 cut(s) 309, 662
BsrDI GCAATG 2 cut(s) 370, 630
BsrI ACTGG 5 cut(s) 255, 263, 314, 432, 450
BssMI GATC 4 cut(s) 59, 100, 636, 648
BssSI CACGAG 2 cut(s) 212, 665
Bst2BI CACGAG 2 cut(s) 212, 665
Bst2UI CCWGG 2 cut(s) 221, 641
Bst4CI ACNGT 1 cut(s) 399
BstC8I GCNNGC 2 cut(s) 387, 596
BstDEI CTNAG 4 cut(s) 32, 53, 77, 144
BstF5I GGATG 3 cut(s) 189, 286, 378
BstFNI CGCG 1 cut(s) 594
BstHHI GCGC 1 cut(s) 594
BstKTI GATC 4 cut(s) 62, 103, 639, 651
BstMAI GTCTC 3 cut(s) 309, 433, 662
BstMBI GATC 4 cut(s) 59, 100, 636, 648
BstNI CCWGG 2 cut(s) 221, 641
BstSCI CCNGG 2 cut(s) 219, 639
BstUI CGCG 1 cut(s) 594
BstV1I GCAGC 2 cut(s) 549, 607
BstX2I RGATCY 1 cut(s) 636
BstYI RGATCY 1 cut(s) 636
BsuRI GGCC 2 cut(s) 84, 207
BtsCI GGATG 3 cut(s) 189, 286, 378
BtsIMutI CAGTG 2 cut(s) 85, 307
BveI ACCTGC 1 cut(s) 589
Cac8I GCNNGC 2 cut(s) 387, 596
CciI TCATGA 2 cut(s) 355, 420
CfoI GCGC 1 cut(s) 594
Cfr13I GGNCC 1 cut(s) 83
Csp6I GTAC 3 cut(s) 50, 224, 544
CviAII CATG 5 cut(s) 138, 356, 421, 584, 661
CviQI GTAC 3 cut(s) 50, 224, 544
DdeI CTNAG 4 cut(s) 32, 53, 77, 144
DpnI GATC 4 cut(s) 61, 102, 638, 650
DpnII GATC 4 cut(s) 59, 100, 636, 648
DrdI GACNNNNNNGTC 1 cut(s) 71
DseDI GACNNNNNNGTC 1 cut(s) 71
Eco147I AGGCCT 1 cut(s) 207
Eco31I GGTCTC 2 cut(s) 309, 662
EcoRII CCWGG 2 cut(s) 219, 639
FaeI CATG 5 cut(s) 141, 359, 424, 587, 664
FatI CATG 5 cut(s) 137, 355, 420, 583, 660
FbaI TGATCA 1 cut(s) 648
Fnu4HI GCNGC 2 cut(s) 538, 621
FokI GGATG 3 cut(s) 196, 293, 385
Fsp4HI GCNGC 2 cut(s) 538, 621
GlaI GCGC 1 cut(s) 593
GluI GCNGC 2 cut(s) 538, 621
GsuI CTGGAG 4 cut(s) 315, 331, 415, 662
HaeIII GGCC 2 cut(s) 84, 207
HapII CCGG 1 cut(s) 239
HhaI GCGC 1 cut(s) 594
Hin1II CATG 5 cut(s) 141, 359, 424, 587, 664
Hin6I GCGC 1 cut(s) 592
HinP1I GCGC 1 cut(s) 592
HincII GTYRAC 1 cut(s) 415
HindII GTYRAC 1 cut(s) 415
HinfI GANTC 4 cut(s) 28, 105, 335, 470
HpaII CCGG 1 cut(s) 239
HphI GGTGA 2 cut(s) 465, 575
Hpy166II GTNNAC 2 cut(s) 415, 566
Hpy188I TCNGA 4 cut(s) 56, 64, 145, 653
Hpy188III TCNNGA 6 cut(s) 17, 181, 356, 421, 458, 667
Hpy8I GTNNAC 2 cut(s) 415, 566
HpyAV CCTTC 2 cut(s) 177, 375
HpyCH4III ACNGT 1 cut(s) 399
HpyCH4IV ACGT 1 cut(s) 342
HpyCH4V TGCA 7 cut(s) 176, 194, 323, 407, 524, 537, 623
HpyF3I CTNAG 4 cut(s) 32, 53, 77, 144
HpySE526I ACGT 1 cut(s) 342
Hsp92II CATG 5 cut(s) 141, 359, 424, 587, 664
HspAI GCGC 1 cut(s) 592
KpnI GGTACC 1 cut(s) 227
Ksp22I TGATCA 1 cut(s) 648
Kzo9I GATC 4 cut(s) 59, 100, 636, 648
LmnI GCTCC 2 cut(s) 312, 643
Lsp1109I GCAGC 2 cut(s) 549, 607
LweI GCATC 1 cut(s) 394
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 1 cut(s) 601
MalI GATC 4 cut(s) 61, 102, 638, 650
MboI GATC 4 cut(s) 59, 100, 636, 648
MfeI CAATTG 1 cut(s) 171
MflI RGATCY 1 cut(s) 636
MluCI AATT 3 cut(s) 171, 232, 571
MlyI GAGTC 1 cut(s) 99
MnlI CCTC 8 cut(s) 86, 139, 218, 237, 271, 290, 362, 647
MroXI GAANNNNTTC 1 cut(s) 27
MseI TTAA 1 cut(s) 231
MslI CAYNNNNRTG 1 cut(s) 665
MspA1I CMGCKG 1 cut(s) 540
MspI CCGG 1 cut(s) 239
MspR9I CCNGG 2 cut(s) 221, 641
MunI CAATTG 1 cut(s) 171
Mva1269I GAATGC 2 cut(s) 176, 196
MvaI CCWGG 2 cut(s) 221, 641
MvnI CGCG 1 cut(s) 594
NdeII GATC 4 cut(s) 59, 100, 636, 648
NlaIII CATG 5 cut(s) 141, 359, 424, 587, 664
NlaIV GGNNCC 3 cut(s) 225, 314, 581
NmuCI GTSAC 1 cut(s) 601
PagI TCATGA 2 cut(s) 355, 420
PceI AGGCCT 1 cut(s) 207
PctI GAATGC 2 cut(s) 176, 196
PdmI GAANNNNTTC 1 cut(s) 27
PfeI GAWTC 3 cut(s) 28, 335, 470
PfoI TCCNGGA 1 cut(s) 639
PkrI GCNGC 2 cut(s) 539, 622
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 219, 639
PspGI CCWGG 2 cut(s) 219, 639
PspN4I GGNNCC 3 cut(s) 225, 314, 581
PspPI GGNCC 1 cut(s) 83
PsuI RGATCY 1 cut(s) 636
PvuII CAGCTG 1 cut(s) 540
RsaI GTAC 3 cut(s) 51, 225, 545
RsaNI GTAC 3 cut(s) 50, 224, 544
RseI CAYNNNNRTG 1 cut(s) 665
SaqAI TTAA 1 cut(s) 231
SatI GCNGC 2 cut(s) 538, 621
Sau3AI GATC 4 cut(s) 59, 100, 636, 648
Sau96I GGNCC 1 cut(s) 83
SchI GAGTC 1 cut(s) 99
ScrFI CCNGG 2 cut(s) 221, 641
SfaNI GCATC 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 665
Sse9I AATT 3 cut(s) 171, 232, 571
SseBI AGGCCT 1 cut(s) 207
SsiI CCGC 1 cut(s) 476
StuI AGGCCT 1 cut(s) 207
StyD4I CCNGG 2 cut(s) 219, 639
TaaI ACNGT 1 cut(s) 399
TaiI ACGT 1 cut(s) 345
TaqI TCGA 2 cut(s) 103, 111
TasI AATT 3 cut(s) 171, 232, 571
TatI WGTACW 1 cut(s) 49
TfiI GAWTC 3 cut(s) 28, 335, 470
Tru1I TTAA 1 cut(s) 231
Tru9I TTAA 1 cut(s) 231
TscAI CASTG 2 cut(s) 85, 314
TseFI GTSAC 1 cut(s) 601
TseI GCWGC 2 cut(s) 537, 620
Tsp45I GTSAC 1 cut(s) 601
TspDTI ATGAA 5 cut(s) 36, 203, 341, 389, 409
TspGWI ACGGA 2 cut(s) 561, 583
TspRI CASTG 2 cut(s) 85, 314
XapI RAATTY 1 cut(s) 571
XmnI GAANNNNTTC 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.