Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0015577

Physical Location & Seq

Genomic Coordinates Forward (+)

13827121 .. 13829116

Gene Structure 1996 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAAAAGGTATCTTGTTAACACTATTAATAACACTGCTTGCTACTTCCCGTTGACCTTCATTTCTCGCTCTAATGGCCACCCTTCTCTGGCCATTTCCACCGCCACCGGCAGCGGCCGAAACTTCCCAATTCCTCCACTCATCCACCCCTCCACTCCCTTTTCCAAAAACCCATCACCCATCTCCAAAAAAATCTCTCTCCAAATTCCACAGCAGCAGGTTCGGCAATTTTCTCGACTTAAAACCAGAGGCAAAACCCGAGTCTTTGCACTTCGATCGATCCAGCAATTCGACCCGTCAACCCGGTCTCGCTTAGATGTGATCATTATCGGGACCGGCCCGGCCGGGCTTCGCCTTGCGGAGCAAGTTTCCCGCTACGGCATTAAGGTATGCTGTGTTGATCCTTCTCCTCTTTCTATGTGGCCAAATAACTATGGAGTTTGGGTTGATGAATTTGAAAGCTTGAATCTTGAAAGTTGCTTGGACAAAACGTGGCCTATGGCTTCTGTTCATGTGAACGATAGTAAGACTAAGTATTTGGACCGCCCTTATGGTAGAGTTAGTAGGAAGAAACTCAAGACTTTGTTGTTGGAGAGGTGTCTCTCCAATGGGGTTCAATTTCATAAGGCTAAGGTTTGGAAAATCGAACACGAAGAGTTCGAGTCCTCTATTTTGTGCGATGATGGGAATGAGCTCAAGGCAAGCTTGATTGTTGATGCTAGTGGGTTTGCAAGCAGTTTCATAGAGTATGAGAAGCCTAGGAACCATGGCTATCAGATTGCTCATGGTATTTTGGCTGAAGTGGAAGACCACCCGTTTGATTTGGACAAGATGCTTCTAATGGATTGGAGAGATTCCCATCTCGATAACGAGCCTTATTTGCGCACTAGTAATTCTAGATTCCCAACTTTTTTATATGCAATGCCGTTTGATTCAAACTTGGTGTTTCTGGAAGAAACTTCGCTTGTTAGTAGGCCGGTGTTGTCTTATATGGAGATTAAGAAACGAATGGTTGCGAGGCTAAGGCATTTGGGGATTAGAGTGAAGAGGGTGATTGAAAACGAGAAGTGTTTGATCCCAATGGGAGGTCCGCTTCCTCGGATCCCCCAAAGAGTGATGTCAATTGGAGGGACTTCTGGGGTTGTTCACCCTTCAACTGGGTACATGGTGGCTAGAACCATGTCTCTAGCCCCGGTGTTGGCTGAGGCCATTGCAGAATGCCTTGGTTCAACCCGAATGATCCGAGGGCAACCGCTTTATCATAGAGCATGGAATGGCTTGTGGCCAATTGAGAGGAGATGCACGAGGGACTTTTACTCATTTGGTATGGAGACTTTGTTGAAGCTTGATCTGAATGGGAGTAGAAGCTTCTTTGACGCTTTCTTTGACTTGAATCCTTATTACTGGCAAGGCTTTCTGTCGTCAAGGTTGTCTCTGAGAGAGCTCGCGTTGTTGAGTTTATCTCTGTTTACCCGAGCCTCTGCCCCATCTAGGTTTGATATTGTTACAAAGTGTCCTGTTCCCTTGGTTAAACTGATGGGCAATCTCGCACTTGAAGCTAGTTTGGTTTTCGTTCCATTGATTTTACAAGTGATCCTCTTGTCAAATGATCAGCTGAGACACAGAGCATGTGTAAAATGCTATTGGGATGGTATACTTAATTCCCCAATTTCTGAATCTGTAGTTGGTTATATTTCCTTCCGGAAGGCCATTCTCTTTATATGTAACTTCATTTCTACGTTTTCCATTTCACTCGTACCTGATAAAATTGACTTGCTACGTATTTTACCTCGAAAACTTATTGATAGAAGACCGCAGGTATCCATTGAAAATGAGAGTCCGAAACGAAGGAAACATTGCAGCATAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009687 GO:0009688 GO:0009987 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016853 GO:0016860 GO:0019752 GO:0032787 GO:0034020 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046165 GO:0046394 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Lycopene_cycl Trp_halogenase

Protein Analysis

624

Amino Acids

70.85

Weight (kDa)

9.54

Isoelectric Point (pI)

51.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lycopene_cycl	PF05834	106 - 497	2.3e-144	Lycopene cyclase protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015577)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g25490
malus_domestica	MD03G1148700.v1.1 MD11G1168000.v1.1
prunus_persica	Prupe.6G135000_v2.0.a1
pyrus_communis	pycom03g10310 pycom11g14030
rosa_chinensis	RchiOBHm_Chr5g0046551
rosa_laevigata	RLG00000034417
rosa_multiflora	Rmu_sc0003878.1_g000038
rosa_roxburghii	Rroxscaffold_1G00034850
rosa_rugosa	Rorug05G0229500
rosa_samantha	Rh5AG309800 Rh5BG318200 Rh5CG343900 Rh5DG328500
rosa_wichuraiana	Rw5G028900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	884
Acc36I	ACCTGC	2 cut(s)	208, 1807
AccI	GTMKAC	1 cut(s)	1654
AccII	CGCG	1 cut(s)	1448
AccIII	TCCGGA	1 cut(s)	1701
AciI	CCGC	8 cut(s)	102, 114, 359, 373, 544, 1091, 1253, 1814
AclWI	GGATC	7 cut(s)	274, 395, 1069, 1096, 1109, 1234, 1588
AcoI	YGGCCR	6 cut(s)	76, 90, 115, 342, 422, 1283
AcsI	RAATTY	2 cut(s)	204, 452
AcuI	CTGAAG	1 cut(s)	819
AfaI	GTAC	2 cut(s)	1163, 1758
AfiI	CCNNNNNNNGG	5 cut(s)	88, 1085, 1157, 1198, 1491
AhlI	ACTAGT	1 cut(s)	887
AjuI	GAANNNNNNNTTGG	2 cut(s)	1668, 1700
AluBI	AGCT	8 cut(s)	462, 694, 705, 1345, 1368, 1444, 1559, 1615
AluI	AGCT	8 cut(s)	462, 694, 705, 1345, 1368, 1444, 1559, 1615
Alw21I	GWGCWC	2 cut(s)	696, 1446
Alw26I	GTCTC	6 cut(s)	312, 605, 1188, 1325, 1437, 1612
AlwI	GGATC	7 cut(s)	274, 395, 1069, 1096, 1109, 1234, 1588
Ama87I	CYCGRG	2 cut(s)	258, 1473
Aor13HI	TCCGGA	1 cut(s)	1701
ApeKI	GCWGC	3 cut(s)	111, 214, 1860
ApoI	RAATTY	2 cut(s)	204, 452
ArsI	GACNNNNNNTTYG	8 cut(s)	246, 278, 520, 552, 800, 832, 1367, 1399
AseI	ATTAAT	1 cut(s)	27
AspA2I	CCTAGG	1 cut(s)	758
AspLEI	GCGC	1 cut(s)	885
AspS9I	GGNCC	4 cut(s)	333, 338, 541, 1088
AsuC2I	CCSGG	4 cut(s)	304, 341, 346, 1193
AsuHPI	GGTGA	3 cut(s)	168, 1063, 1139
AvaI	CYCGRG	2 cut(s)	258, 1473
AvaII	GGWCC	3 cut(s)	333, 541, 1088
AvrII	CCTAGG	1 cut(s)	758
BalI	TGGCCA	4 cut(s)	78, 92, 424, 1285
BamHI	GGATCC	1 cut(s)	1101
BanII	GRGCYC	2 cut(s)	696, 1446
BauI	CACGAG	1 cut(s)	1303
BbsI	GAAGAC	2 cut(s)	813, 1816
Bbv12I	GWGCWC	2 cut(s)	696, 1446
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	2 cut(s)	123, 226
BccI	CCATC	7 cut(s)	181, 188, 677, 867, 1495, 1531, 1643
BceAI	ACGGC	2 cut(s)	394, 910
BcgI	CGANNNNNNTGC	6 cut(s)	203, 215, 237, 249, 258, 292
BciVI	GTATCC	1 cut(s)	1831
BclI	TGATCA	2 cut(s)	321, 1609
BcnI	CCSGG	4 cut(s)	304, 341, 346, 1193
BcoDI	GTCTC	6 cut(s)	312, 605, 1188, 1325, 1437, 1612
BcuI	ACTAGT	1 cut(s)	887
BfaI	CTAG	8 cut(s)	720, 759, 888, 897, 1173, 1187, 1491, 1560
BfmI	CTRYAG	1 cut(s)	1680
BfuAI	ACCTGC	2 cut(s)	208, 1807
BfuI	GTATCC	1 cut(s)	1831
BisI	GCNGC	4 cut(s)	112, 115, 215, 1861
BlnI	CCTAGG	1 cut(s)	758
BlsI	GCNGC	4 cut(s)	113, 116, 216, 1862
Bme1390I	CCNGG	4 cut(s)	304, 341, 346, 1193
Bme18I	GGWCC	3 cut(s)	333, 541, 1088
BmeT110I	CYCGRG	2 cut(s)	258, 1473
BmgT120I	GGNCC	4 cut(s)	333, 338, 541, 1088
BmiI	GGNNCC	3 cut(s)	334, 764, 1103
BmrFI	CCNGG	4 cut(s)	304, 341, 346, 1193
BmrI	ACTGGG	1 cut(s)	1167
BmsI	GCATC	3 cut(s)	706, 822, 1289
BmuI	ACTGGG	1 cut(s)	1167
BpiI	GAAGAC	2 cut(s)	813, 1816
BplI	GAGNNNNNCTC	2 cut(s)	1447, 1479
Bpu10I	CCTNAGC	3 cut(s)	630, 1022, 1203
BpuEI	CTTGAG	2 cut(s)	560, 680
BpuMI	CCSGG	4 cut(s)	304, 341, 346, 1193
Bsa29I	ATCGAT	1 cut(s)	278
BsaAI	YACGTR	1 cut(s)	1781
BsaBI	GATNNNNATC	2 cut(s)	326, 858
BsaI	GGTCTC	1 cut(s)	312
BsaJI	CCNNGG	7 cut(s)	758, 766, 1097, 1191, 1222, 1243, 1524
BsaWI	WCCGGW	1 cut(s)	1701
BsaXI	ACNNNNNCTCC	4 cut(s)	429, 459, 1322, 1352
Bsc4I	CCNNNNNNNGG	5 cut(s)	88, 1085, 1157, 1198, 1491
Bse118I	RCCGGY	3 cut(s)	107, 335, 976
Bse1I	ACTGG	2 cut(s)	1162, 1409
Bse3DI	GCAATG	3 cut(s)	927, 1209, 1855
Bse8I	GATNNNNATC	2 cut(s)	326, 858
BseAI	TCCGGA	1 cut(s)	1701
BseCI	ATCGAT	1 cut(s)	278
BseDI	CCNNGG	7 cut(s)	758, 766, 1097, 1191, 1222, 1243, 1524
BseGI	GGATG	2 cut(s)	141, 1654
BseJI	GATNNNNATC	2 cut(s)	326, 858
BseLI	CCNNNNNNNGG	5 cut(s)	88, 1085, 1157, 1198, 1491
BseMI	GCAATG	3 cut(s)	927, 1209, 1855
BseMII	CTCAG	3 cut(s)	1194, 1427, 1607
BseNI	ACTGG	2 cut(s)	1162, 1409
BseRI	GAGGAG	2 cut(s)	399, 1309
BseX3I	CGGCCG	2 cut(s)	115, 342
BseXI	GCAGC	2 cut(s)	123, 226
Bsh1236I	CGCG	1 cut(s)	1448
Bsh1285I	CGRYCG	3 cut(s)	118, 278, 345
BshVI	ATCGAT	1 cut(s)	278
BsiEI	CGRYCG	3 cut(s)	118, 278, 345
BsiHKAI	GWGCWC	2 cut(s)	696, 1446
BsiHKCI	CYCGRG	2 cut(s)	258, 1473
BsiSI	CCGG	8 cut(s)	108, 304, 336, 341, 345, 977, 1193, 1702
BslFI	GGGAC	3 cut(s)	346, 1144, 1322
BslI	CCNNNNNNNGG	5 cut(s)	88, 1085, 1157, 1198, 1491
BsmAI	GTCTC	6 cut(s)	312, 605, 1188, 1325, 1437, 1612
BsmFI	GGGAC	3 cut(s)	346, 1144, 1322
BsmI	GAATGC	1 cut(s)	1223
Bso31I	GGTCTC	1 cut(s)	312
BsoBI	CYCGRG	2 cut(s)	258, 1473
Bsp1286I	GDGCHC	2 cut(s)	696, 1446
Bsp13I	TCCGGA	1 cut(s)	1701
Bsp19I	CCATGG	1 cut(s)	766
BspACI	CCGC	8 cut(s)	102, 114, 359, 373, 544, 1091, 1253, 1814
BspCNI	CTCAG	3 cut(s)	1195, 1428, 1608
BspDI	ATCGAT	1 cut(s)	278
BspEI	TCCGGA	1 cut(s)	1701
BspFNI	CGCG	1 cut(s)	1448
BspLI	GGNNCC	3 cut(s)	334, 764, 1103
BspMI	ACCTGC	2 cut(s)	208, 1807
BspPI	GGATC	7 cut(s)	274, 395, 1069, 1096, 1109, 1234, 1588
BspTNI	GGTCTC	1 cut(s)	312
BsrDI	GCAATG	3 cut(s)	927, 1209, 1855
BsrFI	RCCGGY	3 cut(s)	107, 335, 976
BsrI	ACTGG	2 cut(s)	1162, 1409
BssAI	RCCGGY	3 cut(s)	107, 335, 976
BssECI	CCNNGG	7 cut(s)	758, 766, 1097, 1191, 1222, 1243, 1524
BssNAI	GTATAC	1 cut(s)	1655
BssSI	CACGAG	1 cut(s)	1303
BssT1I	CCWWGG	4 cut(s)	758, 766, 1222, 1524
Bst1107I	GTATAC	1 cut(s)	1655
Bst2BI	CACGAG	1 cut(s)	1303
Bst6I	CTCTTC	2 cut(s)	648, 1040
BstBAI	YACGTR	1 cut(s)	1781
BstC8I	GCNNGC	4 cut(s)	40, 703, 733, 1446
BstDEI	CTNAG	7 cut(s)	313, 531, 630, 1022, 1203, 1436, 1616
BstDSI	CCRYGG	1 cut(s)	766
BstF5I	GGATG	2 cut(s)	141, 1654
BstFNI	CGCG	1 cut(s)	1448
BstHHI	GCGC	1 cut(s)	885
BstMAI	GTCTC	6 cut(s)	312, 605, 1188, 1325, 1437, 1612
BstMCI	CGRYCG	3 cut(s)	118, 278, 345
BstMWI	GCNNNNNNNGC	4 cut(s)	75, 223, 880, 1556
BstNSI	RCATGY	1 cut(s)	1632
BstSCI	CCNGG	4 cut(s)	302, 339, 344, 1191
BstSFI	CTRYAG	1 cut(s)	1680
BstSNI	TACGTA	1 cut(s)	1781
BstUI	CGCG	1 cut(s)	1448
BstV1I	GCAGC	2 cut(s)	123, 226
BstV2I	GAAGAC	2 cut(s)	813, 1816
BstX2I	RGATCY	1 cut(s)	1101
BstYI	RGATCY	1 cut(s)	1101
BstZ17I	GTATAC	1 cut(s)	1655
BstZI	CGGCCG	2 cut(s)	115, 342
Bsu15I	ATCGAT	1 cut(s)	278
BsuI	GTATCC	1 cut(s)	1831
BsuTUI	ATCGAT	1 cut(s)	278
BtgI	CCRYGG	1 cut(s)	766
BtgZI	GCGATG	1 cut(s)	693
BtsCI	GGATG	2 cut(s)	141, 1654
BtsI	GCAGTG	1 cut(s)	33
BtsIMutI	CAGTG	1 cut(s)	33
BveI	ACCTGC	2 cut(s)	208, 1807
Cac8I	GCNNGC	4 cut(s)	40, 703, 733, 1446
CfoI	GCGC	1 cut(s)	885
Cfr10I	RCCGGY	3 cut(s)	107, 335, 976
Cfr13I	GGNCC	4 cut(s)	333, 338, 541, 1088
ClaI	ATCGAT	1 cut(s)	278
CseI	GACGC	1 cut(s)	1385
Csp6I	GTAC	2 cut(s)	1162, 1757
CviAII	CATG	8 cut(s)	512, 767, 785, 1165, 1180, 1269, 1629, 1869
CviQI	GTAC	2 cut(s)	1162, 1757
DdeI	CTNAG	7 cut(s)	313, 531, 630, 1022, 1203, 1436, 1616
EaeI	YGGCCR	6 cut(s)	76, 90, 115, 342, 422, 1283
EagI	CGGCCG	2 cut(s)	115, 342
Eam1104I	CTCTTC	2 cut(s)	648, 1040
EarI	CTCTTC	2 cut(s)	648, 1040
Ecl136II	GAGCTC	2 cut(s)	694, 1444
EclXI	CGGCCG	2 cut(s)	115, 342
Eco105I	TACGTA	1 cut(s)	1781
Eco130I	CCWWGG	4 cut(s)	758, 766, 1222, 1524
Eco24I	GRGCYC	2 cut(s)	696, 1446
Eco31I	GGTCTC	1 cut(s)	312
Eco47I	GGWCC	3 cut(s)	333, 541, 1088
Eco52I	CGGCCG	2 cut(s)	115, 342
Eco53kI	GAGCTC	2 cut(s)	694, 1444
Eco57I	CTGAAG	1 cut(s)	819
Eco88I	CYCGRG	2 cut(s)	258, 1473
EcoICRI	GAGCTC	2 cut(s)	694, 1444
EcoT14I	CCWWGG	4 cut(s)	758, 766, 1222, 1524
EcoT38I	GRGCYC	2 cut(s)	696, 1446
ErhI	CCWWGG	4 cut(s)	758, 766, 1222, 1524
FaeI	CATG	8 cut(s)	515, 770, 788, 1168, 1183, 1272, 1632, 1872
FalI	AAGNNNNNCTT	2 cut(s)	689, 721
FaqI	GGGAC	3 cut(s)	346, 1144, 1322
FatI	CATG	8 cut(s)	511, 766, 784, 1164, 1179, 1268, 1628, 1868
FauI	CCCGC	1 cut(s)	380
FbaI	TGATCA	2 cut(s)	321, 1609
FblI	GTMKAC	1 cut(s)	1654
Fnu4HI	GCNGC	4 cut(s)	112, 115, 215, 1861
FokI	GGATG	2 cut(s)	128, 1661
FriOI	GRGCYC	2 cut(s)	696, 1446
Fsp4HI	GCNGC	4 cut(s)	112, 115, 215, 1861
FspBI	CTAG	8 cut(s)	720, 759, 888, 897, 1173, 1187, 1491, 1560
FspI	TGCGCA	1 cut(s)	884
GlaI	GCGC	1 cut(s)	884
GluI	GCNGC	4 cut(s)	112, 115, 215, 1861
HapII	CCGG	8 cut(s)	108, 304, 336, 341, 345, 977, 1193, 1702
HgaI	GACGC	1 cut(s)	1385
HhaI	GCGC	1 cut(s)	885
Hin1II	CATG	8 cut(s)	515, 770, 788, 1168, 1183, 1272, 1632, 1872
Hin6I	GCGC	1 cut(s)	883
HinP1I	GCGC	1 cut(s)	883
HincII	GTYRAC	3 cut(s)	19, 54, 300
HindII	GTYRAC	3 cut(s)	19, 54, 300
HindIII	AAGCTT	4 cut(s)	460, 703, 1343, 1366
HinfI	GANTC	9 cut(s)	261, 466, 662, 854, 900, 932, 1393, 1676, 1837
HpaI	GTTAAC	1 cut(s)	19
HpaII	CCGG	8 cut(s)	108, 304, 336, 341, 345, 977, 1193, 1702
HphI	GGTGA	3 cut(s)	168, 1063, 1139
Hpy166II	GTNNAC	7 cut(s)	19, 54, 300, 517, 1147, 1470, 1655
Hpy188I	TCNGA	7 cut(s)	777, 1101, 1244, 1353, 1437, 1675, 1842
Hpy188III	TCNNGA	8 cut(s)	234, 331, 470, 577, 863, 897, 950, 1702
Hpy8I	GTNNAC	7 cut(s)	19, 54, 300, 517, 1147, 1470, 1655
HpyAV	CCTTC	7 cut(s)	67, 93, 414, 1161, 1699, 1708, 1842
HpyCH4IV	ACGT	3 cut(s)	491, 1739, 1780
HpyCH4V	TGCA	6 cut(s)	269, 731, 920, 1214, 1302, 1860
HpyF10VI	GCNNNNNNNGC	4 cut(s)	75, 223, 880, 1556
HpyF3I	CTNAG	7 cut(s)	313, 531, 630, 1022, 1203, 1436, 1616
HpySE526I	ACGT	3 cut(s)	491, 1739, 1780
Hsp92II	CATG	8 cut(s)	515, 770, 788, 1168, 1183, 1272, 1632, 1872
HspAI	GCGC	1 cut(s)	883
Kpn2I	TCCGGA	1 cut(s)	1701
Ksp22I	TGATCA	2 cut(s)	321, 1609
KspAI	GTTAAC	1 cut(s)	19
LmnI	GCTCC	1 cut(s)	361
Lsp1109I	GCAGC	2 cut(s)	123, 226
LweI	GCATC	3 cut(s)	706, 822, 1289
MaeI	CTAG	8 cut(s)	720, 759, 888, 897, 1173, 1187, 1491, 1560
MaeII	ACGT	3 cut(s)	491, 1739, 1780
MaeIII	GTNAC	2 cut(s)	1504, 1724
MboII	GAAGA	6 cut(s)	580, 665, 818, 965, 1057, 1821
MfeI	CAATTG	2 cut(s)	1122, 1287
MflI	RGATCY	1 cut(s)	1101
MhlI	GDGCHC	2 cut(s)	696, 1446
MlsI	TGGCCA	4 cut(s)	78, 92, 424, 1285
MluNI	TGGCCA	4 cut(s)	78, 92, 424, 1285
MlyI	GAGTC	3 cut(s)	270, 671, 1846
MmeI	TCCRAC	1 cut(s)	570
Mox20I	TGGCCA	4 cut(s)	78, 92, 424, 1285
MroI	TCCGGA	1 cut(s)	1701
MscI	TGGCCA	4 cut(s)	78, 92, 424, 1285
MseI	TTAA	7 cut(s)	18, 27, 240, 384, 999, 1530, 1659
Msp20I	TGGCCA	4 cut(s)	78, 92, 424, 1285
MspA1I	CMGCKG	2 cut(s)	114, 1615
MspI	CCGG	8 cut(s)	108, 304, 336, 341, 345, 977, 1193, 1702
MspR9I	CCNGG	4 cut(s)	304, 341, 346, 1193
MunI	CAATTG	2 cut(s)	1122, 1287
Mva1269I	GAATGC	1 cut(s)	1223
MvnI	CGCG	1 cut(s)	1448
MwoI	GCNNNNNNNGC	4 cut(s)	75, 223, 880, 1556
NciI	CCSGG	4 cut(s)	304, 341, 346, 1193
NcoI	CCATGG	1 cut(s)	766
NlaIII	CATG	8 cut(s)	515, 770, 788, 1168, 1183, 1272, 1632, 1872
NlaIV	GGNNCC	3 cut(s)	334, 764, 1103
NsbI	TGCGCA	1 cut(s)	884
NspI	RCATGY	1 cut(s)	1632
PcsI	WCGNNNNNNNCGW	1 cut(s)	657
PctI	GAATGC	1 cut(s)	1223
PfeI	GAWTC	6 cut(s)	466, 854, 900, 932, 1393, 1676
PkrI	GCNGC	4 cut(s)	113, 116, 216, 1862
Ple19I	CGATCG	1 cut(s)	278
PleI	GAGTC	3 cut(s)	269, 670, 1845
PpsI	GAGTC	3 cut(s)	269, 670, 1845
Ppu21I	YACGTR	1 cut(s)	1781
PshBI	ATTAAT	1 cut(s)	27
Psp124BI	GAGCTC	2 cut(s)	696, 1446
PspN4I	GGNNCC	3 cut(s)	334, 764, 1103
PspPI	GGNCC	4 cut(s)	333, 338, 541, 1088
PsuI	RGATCY	1 cut(s)	1101
PvuI	CGATCG	1 cut(s)	278
PvuII	CAGCTG	1 cut(s)	1615
RsaI	GTAC	2 cut(s)	1163, 1758
RsaNI	GTAC	2 cut(s)	1162, 1757
SacI	GAGCTC	2 cut(s)	696, 1446
SaqAI	TTAA	7 cut(s)	18, 27, 240, 384, 999, 1530, 1659
SatI	GCNGC	4 cut(s)	112, 115, 215, 1861
Sau96I	GGNCC	4 cut(s)	333, 338, 541, 1088
SchI	GAGTC	3 cut(s)	270, 671, 1846
ScrFI	CCNGG	4 cut(s)	304, 341, 346, 1193
SduI	GDGCHC	2 cut(s)	696, 1446
SfaNI	GCATC	3 cut(s)	706, 822, 1289
SfcI	CTRYAG	1 cut(s)	1680
SinI	GGWCC	3 cut(s)	333, 541, 1088
SmlI	CTYRAG	2 cut(s)	575, 695
SmoI	CTYRAG	2 cut(s)	575, 695
SnaBI	TACGTA	1 cut(s)	1781
SpeI	ACTAGT	1 cut(s)	887
SsiI	CCGC	8 cut(s)	102, 114, 359, 373, 544, 1091, 1253, 1814
SspMI	CTAG	8 cut(s)	720, 759, 888, 897, 1173, 1187, 1491, 1560
SstI	GAGCTC	2 cut(s)	696, 1446
StyD4I	CCNGG	4 cut(s)	302, 339, 344, 1191
StyI	CCWWGG	4 cut(s)	758, 766, 1222, 1524
TaiI	ACGT	3 cut(s)	494, 1742, 1783
TaqI	TCGA	8 cut(s)	235, 274, 278, 291, 645, 660, 864, 1792
TauI	GCSGC	1 cut(s)	117
TfiI	GAWTC	6 cut(s)	466, 854, 900, 932, 1393, 1676
Tru1I	TTAA	7 cut(s)	18, 27, 240, 384, 999, 1530, 1659
Tru9I	TTAA	7 cut(s)	18, 27, 240, 384, 999, 1530, 1659
TscAI	CASTG	1 cut(s)	40
TseI	GCWGC	3 cut(s)	111, 214, 1860
TspDTI	ATGAA	7 cut(s)	17, 49, 465, 500, 611, 730, 1720
TspRI	CASTG	1 cut(s)	40
VpaK11BI	GGWCC	3 cut(s)	333, 541, 1088
VspI	ATTAAT	1 cut(s)	27
XapI	RAATTY	2 cut(s)	204, 452
XbaI	TCTAGA	1 cut(s)	896
XceI	RCATGY	1 cut(s)	1632
XmaJI	CCTAGG	1 cut(s)	758
XmiI	GTMKAC	1 cut(s)	1654
XspI	CTAG	8 cut(s)	720, 759, 888, 897, 1173, 1187, 1491, 1560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.