Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004914

Physical Location & Seq

Genomic Coordinates Reverse (-)

26092435 .. 26098317

Gene Structure 5883 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3216 bp

ATGCCAAAGGGTGAAGCGTGTCACGCAGGCCCAGACACTTTCTATATATACTCACTCCCACCCTTTCTTTTGGATCTCACAGCTCTCACTCTTTCTCCCTGGTTCATTGATCCCACTTTTCGTCTTCGTCTTCTTGCTGAAAATCCAAACTTCCCCAGATTCAGTTGTCCACAGAGTGAGGATCTGTGGGGAGCAATGGCTAACAGGAATCTGGAGAAGATGGCGTCCATTGACGCGCAGCTTCGGCTTCTGGTTCCGGCCAAAGTGAGCGAGGACGACAAGCTGGTGGAATACGATGCTCTGCTTCTGGATCGGTTTCTGGATATTCTTCAGGATTTACATGGGGAGGATCTCAGGGAAACGGTTCAAGCATGTTATGAGCTTTCTGCTGAGTATGAAGGAAAGCATGACCCGAAAAAGCTCTCAGAGCTTGGAAATGTATTAACAAGTTTGGACCCAGGTGATTCTATTGTTGTTGCAAAATCCTTCGCCCACATGCTTAGCTTAGCCAACTTGGCTGAGGAGGTCCAGATTGCTTACCGCAGACGACAAAAGCTCAAAAAGGGTGACTTTGCTGATGAAAATTCTGCAACGACTGAATCAGACATTGAAGAAACTCTCAAGAGGCTTGTGGGGGATCTCAAAAAGTCTCCCCAAGAGGTTTTTGATGCTCTTAAAAATCAGACTGTTGATTTGGTCCTCACTGCTCATCCTACACAATCAGTTCGTAGATCCTTACTTCAGAAGCATGGAAGGTTTGCTCTTGAACTACTACTACAATCTGCATCTTTGACTTTTGTTTGTAGAAACTCGTGTAGGCTTAGATTTTTATGGCTCTCACTCTCTCTCACTCTTGGACACTCACATTTGTTCAGGATTCGGAATTGTTTAACCCAGTTGTACGCGAAAGACATTACTCCTGATGATAAGCAGGAGATTGATGAGGCACTTCAGAGAGAGATCCAAGCTGCATTTCGTACTGATGAGATCCGAAGAACAGCTCCCACACCACAAGATGAGATGAGGGCAGGGATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTCCCAAAGTTCCTACGTCGTGTTGACACAGCTTTGAAGAATATTGGGATTGACGAACGTGTTCCCCATAATGCCCCACTTATTCAGTTTTCTTCTTGGATGGGTGGTGATCGTGATGGCAATCCAAGAGTAACTCCTGAGGTAACAAGGGATGTTTGCCTACTAGCTAGAATGATGGCTGCAAACTTGTACTATTCTCAGATAGAGGATCTTATGTTTGAGTTGTCTATGTGGCGGTGCAATGATGAACTCCGTGTTCGTGCAGATGTAGTACTTCACAGATCCACGAGGAGAGATGCAAAGCACTACATAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTACCGTGTGATTCTCGGTGATGTAAGGGATAAGCTTTATCATACACGTGAACGTTCTCGTCAGTTGTTAGCCACTGGGCACTCTGACATTCCAGAGGAGGCAACACTGATTAGTGTTGAGCAGTTCTTGGAACCTCTCGAACTCTGTTACAGATCACTCTGCTCTTGCGGTGACCGGGCAATTGCCGATGGATCACTTCTTGATTTCTTAAGGCAAGTGTCCACCTTTGGACTTTCACTTGTGAAGCTCGATATTAGGCAAGAATCTGACAGGCATACTGATGTGATCGATGCCATCACCAAGCATCTGGAAATTGGTTCCTATCGTGAGTGGTCTGAAGAACGCCGTCAGGAGTGGCTTTTATCTGAACTATGTGGCAAGCGCCCACTGTTTGGCCCTGACCTTCCAAAAACGGAAGAAATTTCTGATGTTTTGGACACATTACATGTGATATCAGAACTTCCATCTGATAACTTTGGAGCATACATCATATCAATGGCGACTGCTCCATCTGATGTGCTTGCAGTTGAGCTCCTGCAACGTGAATGCCATGTGAAGAAACCACTGAGAGTTGTTCCACTGTTTGAGAAGCTTGCAGATCTGGAGGCTGCTCCTGCTGCTTTGGCTCGGCTTTTCTCAATTGATTGGTATAGAGAGCGAATCAATGGAAAGCAAGAAGTCATGATTGGGTACTCAGATTCTGGCAAAGATGCTGGGCGTTTCTCTGCAGCATGGCAGTTATATAAGGCACAGGAGGAGCTTATAAACGTTGCTAAGAAATTTGGTGTGAAGCTAACTATGTTCCATGGTCGTGGTGGCACTGTTGGAAGGGGAGGTGGGCCCACCCATCTTGCTATTTTGTCTCAACCACCAGATACGATTCATGGTTCACTCCGTGTCACTGTCCAAGGTGAAGTTATTGAACAGTCGTTTGGAGAGGAGCTCTTGTGTTTTAGAACACTCCAGCGTTTCACCGCTGCTACATTAGAGCATGGAATGCATAGGCCAGTTTCACCAAAACCGGAATGGCGTGCGCTTATGGACGAAATGGCTGTTGTAGCTACAGAGGACTATCGTTCCATTGTTTTCCAAGAACCCCGATTTGTCGAGTACTTCCGTCTTGCTACACCAGAGCTGGAGTATGGTCGGATGAACATTGGCAGTCGCCCCTCAAAGCGAAAGCCTAGTGGAGGCATTGAGTCCCTTCGTGCAATCCCATGGATTTTCGCCTGGACACAAACAAGGTTCCATCTTCCAGTGTGGTTAGGCTTCGGAGCAGCCTTCAGACATGTCATTAAGAAGGACATTAAGAATCTTCACATGCTGCAAGACATGTACAACCAATGGCCCTTCTTCAGGGTCACTATTGATTTGGTCGAAATGGTGTTTGCCAAGGGAAACCCCGGAATAGCTGCGTTATATGATAAACTCCTTGTTTCGGAAGAGCTATGGTCATTCGGAGAGCGATTACGGTCCAACTATGAAGAAACCAAGAATTTTCTGTTACAGATTGCTGGACACAAGGATCTTCTCGAAGGTGACCCGCACTTGAAGCAAAGACTCCGCCTGCGTGATTCATACATCACAACCCTCAATGTTTGCCAAGCATATACACTGAAACGGATCCGTGATCCAAACTTTCATGTGACATTGCGGCCACACATCTCAAAGGAAATCAGCGAAACAAGCAAGCCGGCAAATGAACTTGTAAAGCTGAACCCGACAAGCGAGTACGCACCTGGTCTGGAGGACACCCTCATCTTGACAATGAAGGGTATTGCTGCCGGCTTACAGAACACCGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008964 GO:0009267 GO:0009507 GO:0009536 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016043 GO:0016829 GO:0016830 GO:0016831 GO:0022607 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051262 GO:0051716 GO:0065003 GO:0071496 GO:0071840 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

1072

Amino Acids

122.26

Weight (kDa)

6.15

Isoelectric Point (pI)

49.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	99 - 257	2.6e-28	Phosphoenolpyruvate carboxylase
PEPcase	PF00311	291 - 1071	3.5e-300	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53310 AT1G53310 AT1G53310 AT3G14940 AT3G14940
fragaria_vesca	FvH4_3g18430 FvH4_3g18430 FvH4_3g18430 FvH4_3g18430 FvH4_3g18430
malus_domestica	MD03G1242000.v1.1 MD11G1261900.v1.1
prunus_persica	Prupe.4G166400_v2.0.a1 Prupe.4G166400_v2.0.a1 Prupe.4G166400_v2.0.a1 Prupe.4G166400_v2.0.a1 Prupe.4G166400_v2.0.a1
pyrus_communis	pycom03g18910 pycom11g23090
rosa_chinensis	RchiOBHm_Chr5g0031161
rosa_laevigata	RLG00000033287
rosa_multiflora	Rmu_sc0011257.1_g000003
rosa_roxburghii	Rroxscaffold_1G00049100
rosa_rugosa	Rorug05G0122600 Rorug05G0122700
rosa_samantha	Rh5AG216300 Rh5BG215600 Rh5CG239100 Rh5DG220500
rosa_wichuraiana	Rw5G019770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2174
AccB7I	CCANNNNNTGG	1 cut(s)	1802
AccII	CGCG	2 cut(s)	236, 905
AciI	CCGC	7 cut(s)	541, 1300, 1578, 2385, 2954, 2974, 3064
AclI	AACGTT	2 cut(s)	1462, 2178
AcoI	YGGCCR	2 cut(s)	258, 3065
AcsI	RAATTY	5 cut(s)	583, 1379, 1830, 2189, 2905
AcuI	CTGAAG	6 cut(s)	314, 725, 935, 1767, 2677, 2749
AcvI	CACGTG	1 cut(s)	1457
AcyI	GRCGYC	1 cut(s)	224
AdeI	CACNNNGTG	2 cut(s)	176, 2306
AfaI	GTAC	8 cut(s)	902, 979, 1256, 1338, 2102, 2522, 2747, 3143
AfiI	CCNNNNNNNGG	4 cut(s)	1802, 2600, 2766, 2848
AflII	CTTAAG	1 cut(s)	1618
AflIII	ACRYGT	5 cut(s)	1123, 1454, 1855, 2698, 2742
AgeI	ACCGGT	1 cut(s)	3209
AgsI	TTSAA	6 cut(s)	368, 611, 767, 1102, 2333, 2962
AjnI	CCWGG	4 cut(s)	98, 457, 2639, 3148
AjuI	GAANNNNNNNTTGG	6 cut(s)	957, 989, 2079, 2111, 2325, 2357
Alw21I	GWGCWC	2 cut(s)	1944, 2355
Alw26I	GTCTC	2 cut(s)	654, 2277
AlwNI	CAGNNNCTG	1 cut(s)	2111
AoxI	GGCC	7 cut(s)	28, 258, 1804, 2249, 2414, 2756, 3065
ApaI	GGGCCC	1 cut(s)	2253
ApoI	RAATTY	5 cut(s)	583, 1379, 1830, 2189, 2905
ArsI	GACNNNNNNTTYG	2 cut(s)	676, 708
AsiGI	ACCGGT	1 cut(s)	3209
Asp700I	GAANNNNTTC	2 cut(s)	363, 1125
AspLEI	GCGC	3 cut(s)	238, 1794, 2446
AspS9I	GGNCC	9 cut(s)	29, 454, 526, 697, 1805, 2249, 2250, 2757, 2883
AsuC2I	CCSGG	2 cut(s)	1586, 2814
AvaII	GGWCC	4 cut(s)	454, 526, 697, 2883
AxyI	CCTNAGG	1 cut(s)	1203
BaeGI	GKGCMC	2 cut(s)	1491, 2253
BamHI	GGATCC	1 cut(s)	3033
BanII	GRGCYC	3 cut(s)	1944, 2253, 2355
BauI	CACGAG	2 cut(s)	811, 1351
BbrPI	CACGTG	1 cut(s)	1457
BbsI	GAAGAC	2 cut(s)	116, 122
Bbv12I	GWGCWC	2 cut(s)	1944, 2355
BbvCI	CCTCAGC	1 cut(s)	519
BceAI	ACGGC	1 cut(s)	1740
BciT130I	CCWGG	4 cut(s)	100, 459, 2641, 3150
BcnI	CCSGG	2 cut(s)	1586, 2814
BcoDI	GTCTC	2 cut(s)	654, 2277
BfaI	CTAG	3 cut(s)	1229, 1233, 2595
BfmI	CTRYAG	2 cut(s)	2136, 2472
BfoI	RGCGCY	1 cut(s)	1795
BfrI	CTTAAG	1 cut(s)	1618
BglI	GCCNNNNNGGC	1 cut(s)	515
BglII	AGATCT	1 cut(s)	2008
BlpI	GCTNAGC	2 cut(s)	500, 505
BmcAI	AGTACT	2 cut(s)	1338, 2522
Bme1390I	CCNGG	6 cut(s)	100, 459, 1586, 2641, 2814, 3150
Bme18I	GGWCC	4 cut(s)	454, 526, 697, 2883
BmgT120I	GGNCC	9 cut(s)	29, 454, 526, 697, 1805, 2249, 2250, 2757, 2883
BmiI	GGNNCC	7 cut(s)	255, 456, 1542, 1729, 2251, 2657, 3035
BmrFI	CCNGG	6 cut(s)	100, 459, 1586, 2641, 2814, 3150
BmrI	ACTGGG	2 cut(s)	889, 1494
BmsI	GCATC	7 cut(s)	286, 658, 794, 1351, 1690, 1723, 2110
BmuI	ACTGGG	2 cut(s)	889, 1494
BpiI	GAAGAC	2 cut(s)	116, 122
BplI	GAGNNNNNCTC	2 cut(s)	2337, 2369
BpmI	CTGGAG	5 cut(s)	233, 2033, 2357, 2567, 3176
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu1102I	GCTNAGC	2 cut(s)	500, 505
BpuEI	CTTGAG	1 cut(s)	605
BpuMI	CCSGG	2 cut(s)	1586, 2814
Bsa29I	ATCGAT	1 cut(s)	1698
BsaAI	YACGTR	1 cut(s)	1457
BsaBI	GATNNNNATC	1 cut(s)	1185
BsaHI	GRCGYC	1 cut(s)	224
BsaJI	CCNNGG	7 cut(s)	98, 457, 2215, 2317, 2627, 2802, 2812
BsaWI	WCCGGW	2 cut(s)	2431, 3209
BsaXI	ACNNNNNCTCC	4 cut(s)	79, 109, 2342, 2372
Bsc4I	CCNNNNNNNGG	4 cut(s)	1802, 2600, 2766, 2848
Bse118I	RCCGGY	3 cut(s)	3103, 3194, 3209
Bse1I	ACTGG	4 cut(s)	895, 1489, 2417, 2666
Bse21I	CCTNAGG	1 cut(s)	1203
Bse3DI	GCAATG	3 cut(s)	201, 1312, 3059
Bse8I	GATNNNNATC	1 cut(s)	1185
BseBI	CCWGG	4 cut(s)	100, 459, 2641, 3150
BseCI	ATCGAT	1 cut(s)	1698
BseDI	CCNNGG	7 cut(s)	98, 457, 2215, 2317, 2627, 2802, 2812
BseGI	GGATG	5 cut(s)	709, 1038, 1170, 1222, 2565
BseJI	GATNNNNATC	1 cut(s)	1185
BseLI	CCNNNNNNNGG	4 cut(s)	1802, 2600, 2766, 2848
BseMI	GCAATG	3 cut(s)	201, 1312, 3059
BseMII	CTCAG	8 cut(s)	367, 381, 438, 510, 1194, 1277, 1967, 2118
BseNI	ACTGG	4 cut(s)	895, 1489, 2417, 2666
BseRI	GAGGAG	5 cut(s)	536, 1369, 1520, 2180, 2363
BseSI	GKGCMC	2 cut(s)	1491, 2253
BseYI	CCCAGC	1 cut(s)	2123
BsgI	GTGCAG	1 cut(s)	1347
Bsh1236I	CGCG	2 cut(s)	236, 905
BshFI	GGCC	7 cut(s)	30, 260, 1806, 2251, 2416, 2758, 3067
BshTI	ACCGGT	1 cut(s)	3209
BshVI	ATCGAT	1 cut(s)	1698
BsiHKAI	GWGCWC	2 cut(s)	1944, 2355
BsiSI	CCGG	7 cut(s)	257, 1585, 2432, 2814, 3104, 3195, 3210
BslFI	GGGAC	2 cut(s)	1052, 2596
BslI	CCNNNNNNNGG	4 cut(s)	1802, 2600, 2766, 2848
BsmAI	GTCTC	2 cut(s)	654, 2277
BsmFI	GGGAC	2 cut(s)	1052, 2596
BsmI	GAATGC	2 cut(s)	1961, 2412
BsnI	GGCC	7 cut(s)	30, 260, 1806, 2251, 2416, 2758, 3067
Bsp120I	GGGCCC	1 cut(s)	2249
Bsp1286I	GDGCHC	4 cut(s)	1491, 1944, 2253, 2355
Bsp1407I	TGTACA	1 cut(s)	2745
Bsp1720I	GCTNAGC	2 cut(s)	500, 505
Bsp19I	CCATGG	2 cut(s)	2215, 2627
BspACI	CCGC	7 cut(s)	541, 1300, 1578, 2385, 2954, 2974, 3064
BspANI	GGCC	7 cut(s)	30, 260, 1806, 2251, 2416, 2758, 3067
BspCNI	CTCAG	8 cut(s)	366, 382, 437, 511, 1195, 1276, 1968, 2117
BspDI	ATCGAT	1 cut(s)	1698
BspFNI	CGCG	2 cut(s)	236, 905
BspHI	TCATGA	1 cut(s)	2091
BspLI	GGNNCC	7 cut(s)	255, 456, 1542, 1729, 2251, 2657, 3035
BspMAI	CTGCAG	1 cut(s)	2140
BspQI	GCTCTTC	1 cut(s)	2847
BspTI	CTTAAG	1 cut(s)	1618
BsrDI	GCAATG	3 cut(s)	201, 1312, 3059
BsrFI	RCCGGY	3 cut(s)	3103, 3194, 3209
BsrGI	TGTACA	1 cut(s)	2745
BsrI	ACTGG	4 cut(s)	895, 1489, 2417, 2666
BssAI	RCCGGY	3 cut(s)	3103, 3194, 3209
BssECI	CCNNGG	7 cut(s)	98, 457, 2215, 2317, 2627, 2802, 2812
BssNI	GRCGYC	1 cut(s)	224
BssSI	CACGAG	2 cut(s)	811, 1351
BssT1I	CCWWGG	4 cut(s)	2215, 2317, 2627, 2802
Bst2BI	CACGAG	2 cut(s)	811, 1351
Bst2UI	CCWGG	4 cut(s)	100, 459, 2641, 3150
Bst4CI	ACNGT	9 cut(s)	364, 688, 1415, 1800, 1992, 2233, 2314, 2337, 2883
Bst6I	CTCTTC	1 cut(s)	2847
BstACI	GRCGYC	1 cut(s)	224
BstAFI	CTTAAG	1 cut(s)	1618
BstAPI	GCANNNNNTGC	1 cut(s)	2407
BstAUI	TGTACA	1 cut(s)	2745
BstBAI	YACGTR	1 cut(s)	1457
BstC8I	GCNNGC	9 cut(s)	28, 1790, 1932, 2004, 2442, 2978, 3101, 3105, 3196
BstDSI	CCRYGG	2 cut(s)	2215, 2627
BstEII	GGTNACC	2 cut(s)	1580, 2948
BstENI	CCTNNNNNAGG	2 cut(s)	2598, 2764
BstF5I	GGATG	5 cut(s)	709, 1038, 1170, 1222, 2565
BstFNI	CGCG	2 cut(s)	236, 905
BstH2I	RGCGCY	1 cut(s)	1795
BstHHI	GCGC	3 cut(s)	238, 1794, 2446
BstMAI	GTCTC	2 cut(s)	654, 2277
BstNI	CCWGG	4 cut(s)	100, 459, 2641, 3150
BstNSI	RCATGY	6 cut(s)	375, 499, 1859, 2702, 2734, 2746
BstPI	GGTNACC	2 cut(s)	1580, 2948
BstSCI	CCNGG	6 cut(s)	98, 457, 1584, 2639, 2812, 3148
BstSFI	CTRYAG	2 cut(s)	2136, 2472
BstSLI	GKGCMC	2 cut(s)	1491, 2253
BstUI	CGCG	2 cut(s)	236, 905
BstV2I	GAAGAC	2 cut(s)	116, 122
BstXI	CCANNNNNNTGG	2 cut(s)	1717, 2222
Bsu15I	ATCGAT	1 cut(s)	1698
Bsu36I	CCTNAGG	1 cut(s)	1203
BsuRI	GGCC	7 cut(s)	30, 260, 1806, 2251, 2416, 2758, 3067
BsuTUI	ATCGAT	1 cut(s)	1698
BtgI	CCRYGG	2 cut(s)	2215, 2627
BtsCI	GGATG	5 cut(s)	709, 1038, 1170, 1222, 2565
BtsI	GCAGTG	1 cut(s)	702
Cac8I	GCNNGC	9 cut(s)	28, 1790, 1932, 2004, 2442, 2978, 3101, 3105, 3196
CaiI	CAGNNNCTG	1 cut(s)	2111
CciI	TCATGA	1 cut(s)	2091
CfoI	GCGC	3 cut(s)	238, 1794, 2446
Cfr10I	RCCGGY	3 cut(s)	3103, 3194, 3209
Cfr13I	GGNCC	9 cut(s)	29, 454, 526, 697, 1805, 2249, 2250, 2757, 2883
ClaI	ATCGAT	1 cut(s)	1698
CseI	GACGC	2 cut(s)	213, 242
CsiI	ACCWGGT	1 cut(s)	3148
Csp6I	GTAC	8 cut(s)	901, 978, 1255, 1337, 2101, 2521, 2746, 3142
CspAI	ACCGGT	1 cut(s)	3209
CspCI	CAANNNNNGTGG	2 cut(s)	2242, 2277
CviQI	GTAC	8 cut(s)	901, 978, 1255, 1337, 2101, 2521, 2746, 3142
DraIII	CACNNNGTG	2 cut(s)	176, 2306
EaeI	YGGCCR	2 cut(s)	258, 3065
Eam1104I	CTCTTC	1 cut(s)	2847
EarI	CTCTTC	1 cut(s)	2847
EciI	GGCGGA	1 cut(s)	2963
Ecl136II	GAGCTC	2 cut(s)	1942, 2353
Eco130I	CCWWGG	4 cut(s)	2215, 2317, 2627, 2802
Eco24I	GRGCYC	3 cut(s)	1944, 2253, 2355
Eco32I	GATATC	1 cut(s)	1863
Eco47I	GGWCC	4 cut(s)	454, 526, 697, 2883
Eco53kI	GAGCTC	2 cut(s)	1942, 2353
Eco57I	CTGAAG	6 cut(s)	314, 725, 935, 1767, 2677, 2749
Eco72I	CACGTG	1 cut(s)	1457
Eco81I	CCTNAGG	1 cut(s)	1203
Eco91I	GGTNACC	2 cut(s)	1580, 2948
EcoICRI	GAGCTC	2 cut(s)	1942, 2353
EcoNI	CCTNNNNNAGG	2 cut(s)	2598, 2764
EcoO65I	GGTNACC	2 cut(s)	1580, 2948
EcoRII	CCWGG	4 cut(s)	98, 457, 2639, 3148
EcoRV	GATATC	1 cut(s)	1863
EcoT14I	CCWWGG	4 cut(s)	2215, 2317, 2627, 2802
EcoT22I	ATGCAT	1 cut(s)	2412
EcoT38I	GRGCYC	3 cut(s)	1944, 2253, 2355
ErhI	CCWWGG	4 cut(s)	2215, 2317, 2627, 2802
FalI	AAGNNNNNCTT	2 cut(s)	554, 586
FaqI	GGGAC	2 cut(s)	1052, 2596
FauI	CCCGC	1 cut(s)	2961
FokI	GGATG	5 cut(s)	696, 1045, 1177, 1229, 2572
FriOI	GRGCYC	3 cut(s)	1944, 2253, 2355
FspBI	CTAG	3 cut(s)	1229, 1233, 2595
GlaI	GCGC	3 cut(s)	237, 1793, 2445
GsaI	CCCAGC	1 cut(s)	2127
GsuI	CTGGAG	5 cut(s)	233, 2033, 2357, 2567, 3176
HaeII	RGCGCY	1 cut(s)	1795
HaeIII	GGCC	7 cut(s)	30, 260, 1806, 2251, 2416, 2758, 3067
HapII	CCGG	7 cut(s)	257, 1585, 2432, 2814, 3104, 3195, 3210
HgaI	GACGC	2 cut(s)	213, 242
HhaI	GCGC	3 cut(s)	238, 1794, 2446
Hin1I	GRCGYC	1 cut(s)	224
Hin6I	GCGC	3 cut(s)	236, 1792, 2444
HinP1I	GCGC	3 cut(s)	236, 1792, 2444
HincII	GTYRAC	1 cut(s)	1090
HindII	GTYRAC	1 cut(s)	1090
HindIII	AAGCTT	2 cut(s)	1442, 2000
HpaII	CCGG	7 cut(s)	257, 1585, 2432, 2814, 3104, 3195, 3210
Hpy166II	GTNNAC	5 cut(s)	170, 1090, 1460, 1632, 2300
Hpy8I	GTNNAC	5 cut(s)	170, 1090, 1460, 1632, 2300
Hpy99I	CGWCG	1 cut(s)	1086
HpyCH4III	ACNGT	9 cut(s)	364, 688, 1415, 1800, 1992, 2233, 2314, 2337, 2883
HpyCH4IV	ACGT	6 cut(s)	1081, 1123, 1456, 1462, 1951, 2178
HpySE526I	ACGT	6 cut(s)	1081, 1123, 1456, 1462, 1951, 2178
Hsp92I	GRCGYC	1 cut(s)	224
HspAI	GCGC	3 cut(s)	236, 1792, 2444
KroI	GCCGGC	2 cut(s)	3103, 3194
KroNI	GCCGGC	2 cut(s)	3105, 3196
LguI	GCTCTTC	1 cut(s)	2847
LmnI	GCTCC	9 cut(s)	191, 1006, 1889, 1921, 1947, 2026, 2167, 2350, 2684
LweI	GCATC	7 cut(s)	286, 658, 794, 1351, 1690, 1723, 2110
MabI	ACCWGGT	1 cut(s)	3148
MaeI	CTAG	3 cut(s)	1229, 1233, 2595
MaeII	ACGT	6 cut(s)	1081, 1123, 1456, 1462, 1951, 2178
MfeI	CAATTG	2 cut(s)	1590, 2049
MhlI	GDGCHC	4 cut(s)	1491, 1944, 2253, 2355
MlyI	GAGTC	2 cut(s)	2618, 2964
MmeI	TCCRAC	3 cut(s)	2215, 2537, 2910
Mph1103I	ATGCAT	1 cut(s)	2412
MroNI	GCCGGC	2 cut(s)	3103, 3194
MroXI	GAANNNNTTC	2 cut(s)	363, 1125
MseI	TTAA	7 cut(s)	443, 675, 890, 1619, 2706, 2718, 3214
MslI	CAYNNNNRTG	4 cut(s)	1455, 1689, 1904, 2220
MspA1I	CMGCKG	1 cut(s)	2387
MspCI	CTTAAG	1 cut(s)	1618
MspI	CCGG	7 cut(s)	257, 1585, 2432, 2814, 3104, 3195, 3210
MspR9I	CCNGG	6 cut(s)	100, 459, 1586, 2641, 2814, 3150
MunI	CAATTG	2 cut(s)	1590, 2049
Mva1269I	GAATGC	2 cut(s)	1961, 2412
MvaI	CCWGG	4 cut(s)	100, 459, 2641, 3150
MvnI	CGCG	2 cut(s)	236, 905
NaeI	GCCGGC	2 cut(s)	3105, 3196
NciI	CCSGG	2 cut(s)	1586, 2814
NcoI	CCATGG	2 cut(s)	2215, 2627
NgoMIV	GCCGGC	2 cut(s)	3103, 3194
NlaIV	GGNNCC	7 cut(s)	255, 456, 1542, 1729, 2251, 2657, 3035
NmeAIII	GCCGAG	1 cut(s)	2017
NmuCI	GTSAC	7 cut(s)	20, 566, 1580, 2308, 2770, 2948, 3055
NsiI	ATGCAT	1 cut(s)	2412
NspI	RCATGY	6 cut(s)	375, 499, 1859, 2702, 2734, 2746
PagI	TCATGA	1 cut(s)	2091
PciI	ACATGT	3 cut(s)	1855, 2698, 2742
PciSI	GCTCTTC	1 cut(s)	2847
PctI	GAATGC	2 cut(s)	1961, 2412
PdiI	GCCGGC	2 cut(s)	3105, 3196
PdmI	GAANNNNTTC	2 cut(s)	363, 1125
PflMI	CCANNNNNTGG	1 cut(s)	1802
PinAI	ACCGGT	1 cut(s)	3209
PleI	GAGTC	2 cut(s)	2617, 2964
PmaCI	CACGTG	1 cut(s)	1457
PmlI	CACGTG	1 cut(s)	1457
PpsI	GAGTC	2 cut(s)	2617, 2964
Ppu21I	YACGTR	1 cut(s)	1457
PscI	ACATGT	3 cut(s)	1855, 2698, 2742
PsiI	TTATAA	1 cut(s)	2174
Psp124BI	GAGCTC	2 cut(s)	1944, 2355
Psp1406I	AACGTT	2 cut(s)	1462, 2178
Psp6I	CCWGG	4 cut(s)	98, 457, 2639, 3148
PspCI	CACGTG	1 cut(s)	1457
PspEI	GGTNACC	2 cut(s)	1580, 2948
PspFI	CCCAGC	1 cut(s)	2123
PspGI	CCWGG	4 cut(s)	98, 457, 2639, 3148
PspN4I	GGNNCC	7 cut(s)	255, 456, 1542, 1729, 2251, 2657, 3035
PspOMI	GGGCCC	1 cut(s)	2249
PspPI	GGNCC	9 cut(s)	29, 454, 526, 697, 1805, 2249, 2250, 2757, 2883
PsrI	GAACNNNNNNTAC	2 cut(s)	759, 791
PstI	CTGCAG	1 cut(s)	2140
PstNI	CAGNNNCTG	1 cut(s)	2111
RsaI	GTAC	8 cut(s)	902, 979, 1256, 1338, 2102, 2522, 2747, 3143
RsaNI	GTAC	8 cut(s)	901, 978, 1255, 1337, 2101, 2521, 2746, 3142
RseI	CAYNNNNRTG	4 cut(s)	1455, 1689, 1904, 2220
SacI	GAGCTC	2 cut(s)	1944, 2355
SapI	GCTCTTC	1 cut(s)	2847
SaqAI	TTAA	7 cut(s)	443, 675, 890, 1619, 2706, 2718, 3214
Sau96I	GGNCC	9 cut(s)	29, 454, 526, 697, 1805, 2249, 2250, 2757, 2883
ScaI	AGTACT	2 cut(s)	1338, 2522
SchI	GAGTC	2 cut(s)	2618, 2964
ScrFI	CCNGG	6 cut(s)	100, 459, 1586, 2641, 2814, 3150
SduI	GDGCHC	4 cut(s)	1491, 1944, 2253, 2355
SexAI	ACCWGGT	1 cut(s)	3148
SfaNI	GCATC	7 cut(s)	286, 658, 794, 1351, 1690, 1723, 2110
SfcI	CTRYAG	2 cut(s)	2136, 2472
SinI	GGWCC	4 cut(s)	454, 526, 697, 2883
SmiMI	CAYNNNNRTG	4 cut(s)	1455, 1689, 1904, 2220
SmlI	CTYRAG	2 cut(s)	620, 1618
SmoI	CTYRAG	2 cut(s)	620, 1618
SsiI	CCGC	7 cut(s)	541, 1300, 1578, 2385, 2954, 2974, 3064
SspI	AATATT	1 cut(s)	1108
SspMI	CTAG	3 cut(s)	1229, 1233, 2595
SstI	GAGCTC	2 cut(s)	1944, 2355
StyD4I	CCNGG	6 cut(s)	98, 457, 1584, 2639, 2812, 3148
StyI	CCWWGG	4 cut(s)	2215, 2317, 2627, 2802
TaaI	ACNGT	9 cut(s)	364, 688, 1415, 1800, 1992, 2233, 2314, 2337, 2883
TaiI	ACGT	6 cut(s)	1084, 1126, 1459, 1465, 1954, 2181
TaqI	TCGA	6 cut(s)	1548, 1659, 1698, 2517, 2787, 2943
TatI	WGTACW	4 cut(s)	1254, 1336, 2520, 2745
TauI	GCSGC	1 cut(s)	3067
Tru1I	TTAA	7 cut(s)	443, 675, 890, 1619, 2706, 2718, 3214
Tru9I	TTAA	7 cut(s)	443, 675, 890, 1619, 2706, 2718, 3214
TseFI	GTSAC	7 cut(s)	20, 566, 1580, 2308, 2770, 2948, 3055
Tsp45I	GTSAC	7 cut(s)	20, 566, 1580, 2308, 2770, 2948, 3055
TspGWI	ACGGA	6 cut(s)	1307, 1838, 2294, 2516, 3026, 3046
Van91I	CCANNNNNTGG	1 cut(s)	1802
Vha464I	CTTAAG	1 cut(s)	1618
VpaK11BI	GGWCC	4 cut(s)	454, 526, 697, 2883
XagI	CCTNNNNNAGG	2 cut(s)	2598, 2764
XapI	RAATTY	5 cut(s)	583, 1379, 1830, 2189, 2905
XceI	RCATGY	6 cut(s)	375, 499, 1859, 2702, 2734, 2746
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2222, 2433
XmnI	GAANNNNTTC	2 cut(s)	363, 1125
XspI	CTAG	3 cut(s)	1229, 1233, 2595
ZrmI	AGTACT	2 cut(s)	1338, 2522
Zsp2I	ATGCAT	1 cut(s)	2412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.