pycom11g25690

CSC1-like protein At4g02900

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0010682
Physical Location & Seq
Forward (+)
28437059 .. 28442318
5260 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2217 bp
ATGGCGAATTTTCAAGATATTATGATGTCAGCAGCCATCAACATTCTGTCTGCATTCGGATTTCTGGCGGCGTTTGGTCTGCTGCGGCTGCAGCCGTTCAACGACAGAGTCTACTTTCCGAAATGGTACCTCAAGGGGATGAGGGGAAGCCCCACGAGCTCCGGCGCCACCGTTAGGAAATTCGTCAATCTGGACGCCAAAACCTACTTCAAGTTCCTCAATTGGATGCCTGCCGCGCTGCGGATGCCCGAACCGGAGCTCATTGATCACGCCGGCCTTGATTCCGCCGCTTACATTCGGATTTATGTACTCGGGAATGTACCCCCAGATCCTGATGAATCAGTCAGTGAGCATATCGAACATTTTTTCTGTGTAAACCATCCCGATCACTATCTTACACATCAAGTAAGCCACTTGCTGAACTTGGTTAGTTTTGTTGTATACAATGCAAATAAACTTGCACAGGTGGTCGACAAGAAGAAGAGTACGAAAAATTGGCTTGTGTACTACCAAAACAAGTTTGAGAGAAATCCCAAGACAAAGCCTACTACAAAGGTTTCTTTTTTTACAGGTTTCTTGGGCCTATGGGGAGATAGAGTCGACGCGATTGATTACTACAATGATACGATCAAGAAGTTGGTCGAAGAAGAAAAGCAAGAACGAGAAAAGGTTATAAGTGATCCTGATGCCATAATGCCTGCAGCATTTGTTTCATTCAAAACGCGATGGGGAGCAGCTGTGTGTGCTCAAACTCAGCAGTCAAGTAATCCTACCATCTGGTTGACGGAGTGGGCTCCTGAGCCACGCGACATCTATTGGAATAACCTTGCAATTCCATATGTTGAACTCAACGTGCGAAAATTGCTCATGGGTGTTGCCTTTTTCTTCCTTACTTTCTTCTTCATGATTCCAATTGCGTTCGTCCAATCTTTAGCTAACATCGAGGGGATTCAGAAGGCCCTTCCTTTCTTGAAGCCACTACTTCAGATAAGTTCTGTCAAGTCTGTTGTCCAAGGGTTTCTTCCGGGAATTGCATTAAAGATATTTCTTGCTATACTTCCCATGATTCTTATGCTTATGTCAAAGATTGAGGGCTTAACATCACTCTCACATCTGGATAGGAGATCTGCAGCGAAGTATCATTTGTTCATACTTATCAATGTGTTCCTAGGAAGCATTGTTGCTGGAACAGCACTTCAGCAGCTTGAGAAACTTATGAATGAGCCCTCAACCGAGTTCACAAAAACTGTTGGGAGGTCCATCCCAATGAAAGGTACATTCTTCATCACTTATGTCATGGTTGATGGTTGGAGTGGAATCGCTGCAGAAATCCTCAGATTGGTGCCGTTAATTTTGTTTCACCTCAAGAACACATTTCTGGTTAAGACAGAACAAGATAGGGAGCAGGCAACGGATCCCGGTTCCTTGAATTTCGCCACAAACGAACCTAGGACACAATTATATTTTCTGCTGGGTCTTGTTTATTCTGTTGTCACACCTATACTACTTCCTTTCATTCTCATATTCTTCGCTTTTGCCTACGTAGTTTATCGCCATCAGATTATTAATGTCTATGACCAGAAATATGAGAGTGGTGCGGCCTTCTGGCCACAAGTGCATCTTCGTGTAATTATCGGTCTAATCATAGCACAAGTTCTACTAATGGGGCTGTTTAGCACATTAGGCGTTGCGAAATCAACATTCATTCTCATCCCGCAACCTATTTTGACAATCTGGTTCCATAGAGTCTGCAAGGGGCGTTTCGAATCAGCATTCCTAAAATTCCCACTACAGAGTCATAAAAATATGCGGCTCTCGCATTCTGAATGCCGTTACTATACTGTATTCTTAGCAATACCATATTCTCAATGTGCTTGGTTTGGCAACAAACAGGAGGCAATGGTGAAGGATACAGTCGAGCGGGCAACGGAACCAAACCTGAATCTGTTGAACTATCTGAAGGACGCTTACGTGCATCCCGTCTTCAAGGGAGGAGCAGTCCTCTCGTTGTTACAAAGAGAACGTCTCAAATGGGAAGTAAACACGAGTCCGACTCCGGTCCTGAAATTCGCAGTTAGTTTTTCTTTCCGGCAGACACATCTTTTAGGTTCAAAACCCTTCTTTCTTGTAAATGATCATGGATTTTATAGTGTTCATTCTGTGGATGATAGGGAAGATGCAGACATATTAGAATGTCAATGTAGCGATGGAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

739

Amino Acids

84.12

Weight (kDa)

8.95

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 7 - 104 1.7e-14 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 105 - 275 5.4e-39 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 286 - 558 9.2e-87 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010682)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02900 AT4G02900 AT4G02900 AT4G02900
fragaria_vesca FvH4_2g23940 FvH4_2g23940
malus_domestica MD11G1289500.v1.1
prunus_persica Prupe.8G244700_v2.0.a1 Prupe.8G244700_v2.0.a1
pyrus_communis pycom11g25690
rosa_chinensis RchiOBHm_Chr6g0291571
rosa_laevigata RLG00000012106
rosa_roxburghii Rroxscaffold_7G00175960
rosa_rugosa Rorug06G0220300 Rorug06G0220400 Rorug06G0220400
rosa_samantha Rh6AG332700 Rh6CG345900 Rh6DG333100
rosa_wichuraiana Rw6G028890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
Acc65I GGTACC 1 cut(s) 126
AccB1I GGYRCC 3 cut(s) 126, 164, 1342
AccBSI CCGCTC 1 cut(s) 1921
AccI GTMKAC 4 cut(s) 111, 441, 471, 600
AccII CGCG 4 cut(s) 236, 605, 724, 807
AclWI GGATC 4 cut(s) 323, 674, 1409, 1422
AcoI YGGCCR 1 cut(s) 1607
AcsI RAATTY 5 cut(s) 7, 179, 1429, 1781, 2066
AcuI CTGAAG 3 cut(s) 968, 1181, 1979
AcyI GRCGYC 2 cut(s) 165, 195
AfaI GTAC 6 cut(s) 128, 309, 321, 487, 506, 1276
AfiI CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
AjuI GAANNNNNNNTTGG 4 cut(s) 191, 223, 1005, 1037
AluBI AGCT 5 cut(s) 159, 259, 737, 935, 1204
AluI AGCT 5 cut(s) 159, 259, 737, 935, 1204
Alw21I GWGCWC 3 cut(s) 161, 261, 748
Alw26I GTCTC 1 cut(s) 2030
AlwI GGATC 4 cut(s) 323, 674, 1409, 1422
AlwNI CAGNNNCTG 1 cut(s) 332
Ama87I CYCGRG 1 cut(s) 311
AoxI GGCC 5 cut(s) 274, 580, 957, 1599, 1607
ApoI RAATTY 5 cut(s) 7, 179, 1429, 1781, 2066
ArsI GACNNNNNNTTYG 2 cut(s) 2008, 2040
AseI ATTAAT 1 cut(s) 1566
Asp718I GGTACC 1 cut(s) 126
AspA2I CCTAGG 2 cut(s) 1168, 1448
AspLEI GCGC 2 cut(s) 167, 238
AspS9I GGNCC 4 cut(s) 580, 958, 1257, 2059
AsuC2I CCSGG 2 cut(s) 1026, 1419
AsuHPI GGTGA 2 cut(s) 1352, 1915
AsuII TTCGAA 1 cut(s) 1764
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 2 cut(s) 1257, 2059
AvrII CCTAGG 2 cut(s) 1168, 1448
BalI TGGCCA 1 cut(s) 1609
BamHI GGATCC 1 cut(s) 1414
BanI GGYRCC 3 cut(s) 126, 164, 1342
BanII GRGCYC 4 cut(s) 161, 261, 796, 1227
BarI GAAGNNNNNNTAC 2 cut(s) 1952, 1984
BauI CACGAG 2 cut(s) 154, 2044
BbsI GAAGAC 1 cut(s) 1975
Bbv12I GWGCWC 3 cut(s) 161, 261, 748
BccI CCATC 8 cut(s) 44, 387, 720, 782, 1268, 1298, 1563, 2201
BceAI ACGGC 3 cut(s) 79, 1330, 1815
BcgI CGANNNNNNTGC 2 cut(s) 1986, 2020
BciVI GTATCC 1 cut(s) 1903
BclI TGATCA 2 cut(s) 265, 2134
BcnI CCSGG 2 cut(s) 1026, 1419
BcoDI GTCTC 1 cut(s) 2030
BfaI CTAG 2 cut(s) 1169, 1449
BfmI CTRYAG 5 cut(s) 89, 699, 1128, 1323, 1790
BfoI RGCGCY 1 cut(s) 168
BfuI GTATCC 1 cut(s) 1903
BglII AGATCT 1 cut(s) 1124
BlnI CCTAGG 2 cut(s) 1168, 1448
Bme1390I CCNGG 2 cut(s) 1026, 1419
Bme18I GGWCC 2 cut(s) 1257, 2059
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 580, 958, 1257, 2059
BmiI GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
BmrFI CCNGG 2 cut(s) 1026, 1419
BmsI GCATC 6 cut(s) 216, 234, 676, 1627, 1984, 2167
BoxI GACNNNNGTC 1 cut(s) 2057
BpiI GAAGAC 1 cut(s) 1975
BplI GAGNNNNNCTC 6 cut(s) 1986, 2018, 2010, 2042, 2038, 2070
Bpu10I CCTNAGC 1 cut(s) 798
Bpu14I TTCGAA 1 cut(s) 1764
BpuEI CTTGAG 3 cut(s) 116, 1226, 1349
BpuMI CCSGG 2 cut(s) 1026, 1419
BsaAI YACGTR 2 cut(s) 1543, 1972
BsaBI GATNNNNATC 1 cut(s) 390
BsaHI GRCGYC 2 cut(s) 165, 195
BsaJI CCNNGG 3 cut(s) 1012, 1168, 1448
BsaWI WCCGGW 2 cut(s) 253, 2056
BsaXI ACNNNNNCTCC 6 cut(s) 582, 612, 723, 753, 1983, 2013
Bsc4I CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
Bse118I RCCGGY 1 cut(s) 272
Bse3DI GCAATG 1 cut(s) 1905
Bse8I GATNNNNATC 1 cut(s) 390
BseDI CCNNGG 3 cut(s) 1012, 1168, 1448
BseGI GGATG 8 cut(s) 144, 231, 249, 379, 1260, 1710, 1975, 2170
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
BseMI GCAATG 1 cut(s) 1905
BseMII CTCAG 3 cut(s) 767, 789, 1348
BseRI GAGGAG 1 cut(s) 2007
BseYI CCCAGC 1 cut(s) 1471
Bsh1236I CGCG 4 cut(s) 236, 605, 724, 807
BshFI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BshNI GGYRCC 3 cut(s) 126, 164, 1342
BsiHKAI GWGCWC 3 cut(s) 161, 261, 748
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
BslI CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
BsmAI GTCTC 1 cut(s) 2030
BsmBI CGTCTC 1 cut(s) 2030
BsmI GAATGC 4 cut(s) 53, 1772, 1819, 1832
BsnI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BsoBI CYCGRG 1 cut(s) 311
Bsp119I TTCGAA 1 cut(s) 1764
Bsp1286I GDGCHC 5 cut(s) 161, 261, 748, 796, 1227
Bsp143I GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
BspANI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BspCNI CTCAG 3 cut(s) 766, 790, 1347
BspFNI CGCG 4 cut(s) 236, 605, 724, 807
BspHI TCATGA 1 cut(s) 903
BspLI GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
BspMAI CTGCAG 4 cut(s) 93, 703, 1132, 1327
BspPI GGATC 4 cut(s) 323, 674, 1409, 1422
BspT104I TTCGAA 1 cut(s) 1764
BspT107I GGYRCC 3 cut(s) 126, 164, 1342
BsrBI CCGCTC 1 cut(s) 1921
BsrDI GCAATG 1 cut(s) 1905
BsrFI RCCGGY 1 cut(s) 272
BssAI RCCGGY 1 cut(s) 272
BssECI CCNNGG 3 cut(s) 1012, 1168, 1448
BssMI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
BssNAI GTATAC 1 cut(s) 442
BssNI GRCGYC 2 cut(s) 165, 195
BssSI CACGAG 2 cut(s) 154, 2044
BssT1I CCWWGG 3 cut(s) 1012, 1168, 1448
Bst1107I GTATAC 1 cut(s) 442
Bst2BI CACGAG 2 cut(s) 154, 2044
Bst4CI ACNGT 4 cut(s) 172, 1249, 1843, 1915
Bst6I CTCTTC 1 cut(s) 476
BstACI GRCGYC 2 cut(s) 165, 195
BstBAI YACGTR 2 cut(s) 1543, 1972
BstBI TTCGAA 1 cut(s) 1764
BstC8I GCNNGC 5 cut(s) 231, 274, 699, 1407, 1923
BstDEI CTNAG 4 cut(s) 753, 798, 1334, 1849
BstF5I GGATG 8 cut(s) 144, 231, 249, 379, 1260, 1710, 1975, 2170
BstFNI CGCG 4 cut(s) 236, 605, 724, 807
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 2 cut(s) 167, 238
BstKTI GATC 8 cut(s) 268, 331, 388, 630, 682, 1127, 1417, 2137
BstMAI GTCTC 1 cut(s) 2030
BstMBI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
BstPAI GACNNNNGTC 1 cut(s) 2057
BstSCI CCNGG 2 cut(s) 1024, 1417
BstSFI CTRYAG 5 cut(s) 89, 699, 1128, 1323, 1790
BstSNI TACGTA 1 cut(s) 1543
BstUI CGCG 4 cut(s) 236, 605, 724, 807
BstV2I GAAGAC 1 cut(s) 1975
BstX2I RGATCY 3 cut(s) 328, 1124, 1414
BstYI RGATCY 3 cut(s) 328, 1124, 1414
BstZ17I GTATAC 1 cut(s) 442
BsuI GTATCC 1 cut(s) 1903
BsuRI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BtgZI GCGATG 1 cut(s) 739
BtsCI GGATG 8 cut(s) 144, 231, 249, 379, 1260, 1710, 1975, 2170
BtsIMutI CAGTG 1 cut(s) 352
Cac8I GCNNGC 5 cut(s) 231, 274, 699, 1407, 1923
CaiI CAGNNNCTG 1 cut(s) 332
CciI TCATGA 1 cut(s) 903
CfoI GCGC 2 cut(s) 167, 238
Cfr10I RCCGGY 1 cut(s) 272
Cfr13I GGNCC 4 cut(s) 580, 958, 1257, 2059
CseI GACGC 3 cut(s) 203, 611, 1973
Csp6I GTAC 6 cut(s) 127, 308, 320, 486, 505, 1275
CviAII CATG 5 cut(s) 868, 904, 1063, 1297, 2138
CviQI GTAC 6 cut(s) 127, 308, 320, 486, 505, 1275
DdeI CTNAG 4 cut(s) 753, 798, 1334, 1849
DinI GGCGCC 1 cut(s) 166
DpnI GATC 8 cut(s) 267, 330, 387, 629, 681, 1126, 1416, 2136
DpnII GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
EaeI YGGCCR 1 cut(s) 1607
Eam1104I CTCTTC 1 cut(s) 476
EarI CTCTTC 1 cut(s) 476
EciI GGCGGA 1 cut(s) 274
Ecl136II GAGCTC 2 cut(s) 159, 259
Eco105I TACGTA 1 cut(s) 1543
Eco130I CCWWGG 3 cut(s) 1012, 1168, 1448
Eco24I GRGCYC 4 cut(s) 161, 261, 796, 1227
Eco47I GGWCC 2 cut(s) 1257, 2059
Eco53kI GAGCTC 2 cut(s) 159, 259
Eco57I CTGAAG 3 cut(s) 968, 1181, 1979
Eco88I CYCGRG 1 cut(s) 311
EcoICRI GAGCTC 2 cut(s) 159, 259
EcoO109I RGGNCCY 1 cut(s) 958
EcoT14I CCWWGG 3 cut(s) 1012, 1168, 1448
EcoT38I GRGCYC 4 cut(s) 161, 261, 796, 1227
EgeI GGCGCC 1 cut(s) 166
EheI GGCGCC 1 cut(s) 166
ErhI CCWWGG 3 cut(s) 1012, 1168, 1448
Esp3I CGTCTC 1 cut(s) 2030
FaeI CATG 5 cut(s) 871, 907, 1066, 1300, 2141
FalI AAGNNNNNCTT 4 cut(s) 1005, 1037, 1605, 1637
FatI CATG 5 cut(s) 867, 903, 1062, 1296, 2137
FauI CCCGC 2 cut(s) 1722, 1914
FauNDI CATATG 1 cut(s) 838
FbaI TGATCA 2 cut(s) 265, 2134
FblI GTMKAC 4 cut(s) 111, 441, 471, 600
FokI GGATG 8 cut(s) 151, 238, 256, 366, 1247, 1697, 1962, 2177
FriOI GRGCYC 4 cut(s) 161, 261, 796, 1227
FspBI CTAG 2 cut(s) 1169, 1449
GlaI GCGC 2 cut(s) 166, 237
GsaI CCCAGC 1 cut(s) 1475
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 5 cut(s) 276, 582, 959, 1601, 1609
HapII CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
HgaI GACGC 3 cut(s) 203, 611, 1973
HhaI GCGC 2 cut(s) 167, 238
Hin1I GRCGYC 2 cut(s) 165, 195
Hin1II CATG 5 cut(s) 871, 907, 1066, 1300, 2141
Hin6I GCGC 2 cut(s) 165, 236
HinP1I GCGC 2 cut(s) 165, 236
HincII GTYRAC 3 cut(s) 472, 601, 783
HindII GTYRAC 3 cut(s) 472, 601, 783
HpaII CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
HphI GGTGA 2 cut(s) 1352, 1915
Hpy166II GTNNAC 9 cut(s) 112, 376, 442, 472, 505, 601, 783, 1239, 2041
Hpy8I GTNNAC 9 cut(s) 112, 376, 442, 472, 505, 601, 783, 1239, 2041
Hpy99I CGWCG 1 cut(s) 605
HpyAV CCTTC 6 cut(s) 949, 971, 1612, 1900, 1954, 2128
HpyCH4III ACNGT 4 cut(s) 172, 1249, 1843, 1915
HpyCH4IV ACGT 4 cut(s) 852, 1542, 1971, 2023
HpyF3I CTNAG 4 cut(s) 753, 798, 1334, 1849
HpySE526I ACGT 4 cut(s) 852, 1542, 1971, 2023
Hsp92I GRCGYC 2 cut(s) 165, 195
Hsp92II CATG 5 cut(s) 871, 907, 1066, 1300, 2141
HspAI GCGC 2 cut(s) 165, 236
KasI GGCGCC 1 cut(s) 164
KpnI GGTACC 1 cut(s) 130
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Ksp22I TGATCA 2 cut(s) 265, 2134
Kzo9I GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
LmnI GCTCC 6 cut(s) 164, 256, 731, 799, 1402, 1994
LweI GCATC 6 cut(s) 216, 234, 676, 1627, 1984, 2167
MaeI CTAG 2 cut(s) 1169, 1449
MaeII ACGT 4 cut(s) 852, 1542, 1971, 2023
MaeIII GTNAC 3 cut(s) 1492, 1832, 2010
MalI GATC 8 cut(s) 267, 330, 387, 629, 681, 1126, 1416, 2136
MbiI CCGCTC 1 cut(s) 1921
MboI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
MfeI CAATTG 2 cut(s) 220, 912
MflI RGATCY 3 cut(s) 328, 1124, 1414
MhlI GDGCHC 5 cut(s) 161, 261, 748, 796, 1227
MlsI TGGCCA 1 cut(s) 1609
MluNI TGGCCA 1 cut(s) 1609
Mly113I GGCGCC 1 cut(s) 165
MlyI GAGTC 6 cut(s) 117, 606, 1755, 1804, 2047, 2056
MmeI TCCRAC 2 cut(s) 1289, 2075
Mox20I TGGCCA 1 cut(s) 1609
MroNI GCCGGC 1 cut(s) 272
MscI TGGCCA 1 cut(s) 1609
MseI TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
MslI CAYNNNNRTG 2 cut(s) 1265, 1623
Msp20I TGGCCA 1 cut(s) 1609
MspA1I CMGCKG 1 cut(s) 737
MspI CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
MspR9I CCNGG 2 cut(s) 1026, 1419
MunI CAATTG 2 cut(s) 220, 912
Mva1269I GAATGC 4 cut(s) 53, 1772, 1819, 1832
MvnI CGCG 4 cut(s) 236, 605, 724, 807
NaeI GCCGGC 1 cut(s) 274
NarI GGCGCC 1 cut(s) 165
NciI CCSGG 2 cut(s) 1026, 1419
NdeI CATATG 1 cut(s) 838
NdeII GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 5 cut(s) 871, 907, 1066, 1300, 2141
NlaIV GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
NmuCI GTSAC 1 cut(s) 1492
NspV TTCGAA 1 cut(s) 1764
PagI TCATGA 1 cut(s) 903
PcsI WCGNNNNNNNCGW 2 cut(s) 1440, 1977
PctI GAATGC 4 cut(s) 53, 1772, 1819, 1832
PdiI GCCGGC 1 cut(s) 274
PfeI GAWTC 8 cut(s) 281, 338, 907, 949, 1066, 1317, 1766, 1942
PflFI GACNNNGTC 1 cut(s) 107
PfoI TCCNGGA 1 cut(s) 1024
PleI GAGTC 6 cut(s) 116, 605, 1754, 1803, 2047, 2055
PluTI GGCGCC 1 cut(s) 168
PpsI GAGTC 6 cut(s) 116, 605, 1754, 1803, 2047, 2055
Ppu21I YACGTR 2 cut(s) 1543, 1972
PshAI GACNNNNGTC 1 cut(s) 2057
PshBI ATTAAT 1 cut(s) 1566
PsiI TTATAA 1 cut(s) 674
Psp124BI GAGCTC 2 cut(s) 161, 261
PspFI CCCAGC 1 cut(s) 1471
PspN4I GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
PspPI GGNCC 4 cut(s) 580, 958, 1257, 2059
PsrI GAACNNNNNNTAC 2 cut(s) 1130, 1162
PstI CTGCAG 4 cut(s) 93, 703, 1132, 1327
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 3 cut(s) 328, 1124, 1414
PsyI GACNNNGTC 1 cut(s) 107
PvuII CAGCTG 1 cut(s) 737
RsaI GTAC 6 cut(s) 128, 309, 321, 487, 506, 1276
RsaNI GTAC 6 cut(s) 127, 308, 320, 486, 505, 1275
RseI CAYNNNNRTG 2 cut(s) 1265, 1623
SacI GAGCTC 2 cut(s) 161, 261
SalI GTCGAC 2 cut(s) 470, 599
SaqAI TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
Sau3AI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
Sau96I GGNCC 4 cut(s) 580, 958, 1257, 2059
SchI GAGTC 6 cut(s) 117, 606, 1755, 1804, 2047, 2056
ScrFI CCNGG 2 cut(s) 1026, 1419
SduI GDGCHC 5 cut(s) 161, 261, 748, 796, 1227
SfaNI GCATC 6 cut(s) 216, 234, 676, 1627, 1984, 2167
SfcI CTRYAG 5 cut(s) 89, 699, 1128, 1323, 1790
SfoI GGCGCC 1 cut(s) 166
SfuI TTCGAA 1 cut(s) 1764
SinI GGWCC 2 cut(s) 1257, 2059
SmiMI CAYNNNNRTG 2 cut(s) 1265, 1623
SmlI CTYRAG 3 cut(s) 131, 1205, 1364
SmoI CTYRAG 3 cut(s) 131, 1205, 1364
SnaBI TACGTA 1 cut(s) 1543
SspDI GGCGCC 1 cut(s) 164
SspMI CTAG 2 cut(s) 1169, 1449
SstI GAGCTC 2 cut(s) 161, 261
StyD4I CCNGG 2 cut(s) 1024, 1417
StyI CCWWGG 3 cut(s) 1012, 1168, 1448
TaaI ACNGT 4 cut(s) 172, 1249, 1843, 1915
TaiI ACGT 4 cut(s) 855, 1545, 1974, 2026
TaqI TCGA 7 cut(s) 357, 471, 600, 642, 942, 1764, 1917
TaqII GACCGA 1 cut(s) 1625
TatI WGTACW 2 cut(s) 307, 504
TauI GCSGC 6 cut(s) 71, 88, 236, 290, 1601, 1813
TfiI GAWTC 8 cut(s) 281, 338, 907, 949, 1066, 1317, 1766, 1942
Tru1I TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
Tru9I TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
TscAI CASTG 1 cut(s) 352
TseFI GTSAC 1 cut(s) 1492
Tsp45I GTSAC 1 cut(s) 1492
TspGWI ACGGA 3 cut(s) 800, 1427, 1943
TspRI CASTG 1 cut(s) 352
Tth111I GACNNNGTC 1 cut(s) 107
VpaK11BI GGWCC 2 cut(s) 1257, 2059
VspI ATTAAT 1 cut(s) 1566
XapI RAATTY 5 cut(s) 7, 179, 1429, 1781, 2066
XmaJI CCTAGG 2 cut(s) 1168, 1448
XmiI GTMKAC 4 cut(s) 111, 441, 471, 600
XspI CTAG 2 cut(s) 1169, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.