Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0013415

Physical Location & Seq

Genomic Coordinates Forward (+)

13254751 .. 13260497

Gene Structure 5747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4065 bp

ATGTCACAAGATTCTGAAGGGATAAAGACGATTGAGCAGTGGAGATGGTCCGAAATGCAAGGTCTTGAGCTGCTGCCTGATGCTGCCGATCCTTTTAAAACCAATCCACCAGCAAACCCATCAAACCCAACGGCAACAACATCAACTCCCCAGAGGGCAACAACATCAACTCCCCAGAGGGCAGACAGAATGGAGAGCTCCGAGCCCAAAAAGGAATCCACCGGCGGCGGCGACGGTGTAGAAAAGCCGGAGTCTTTACCTGCAGTTCAGTTCAAGGAACTCTTCAGATTCGCTGATGGGTTGGATTACGTTCTGATGGCAATTGGGTCAGTCGGAGCTGTCGTGCATGGCAGCTCTCTCCCCATTTTTCTCCGGTTCTTCGCCGATCTTGTTAATTCTTTCGGCGCGAATGCGAACGACATGGATAAGATGATGCAGGAGGTTTTGAAGTACGCATTGTACTTTCTGGTGGTTGGAGCTGCAATATGGGCGGCTTCATGGGCCGAGATTTCTTGTTGGATGTGGACCGGAGAGCGGCAATCAACAAAGATGAGGATAAAGTACCTTGAGGCTGCTCTGAGCCAGGACGTTCAGTACTTTGACACTGAGGTTCGGACATCCGACGTCGTTTTTGCAATCAACACCGATGCAGTGATGGTCCAGGATGCCATTAGTGAGAAGTTAGGTAATTTCATTCACTATATGGCAACATTTGTGTCTGGATTCGTGGTGGGTTTTACTGCTGTGTGGCAATTAGCACTTGTCACACTTGCTGTTGTTCCGCTGATAGAGGTGATCGGAGCCATTCATACCACCGCATTAGGCAAAATCTCAGGCAAGAGCCAAGATGCTCTTTCACAAGCAGGACACACGGTAGAACAGACTGTAGCTCAAATTCGAGTTGTTTTGTCATACGTTGGGGAATCGAGAGCGCTACAAGCATACTCCTCGGCATTGAAGGTGGCTCAGAAGCTTGGTTACAAAAGTGGATTTGCTAAAGGAATGGGGCTCGGAGCAACTTACTTTGTAGTTTTCTGCTGTTATGCACTTCTTCTATGGTATGGGGGTTATCTTGTAAGGCACCACTTCACCAATGGCGGTCTTGCCATCTCCACCATGTTTGCCGTCATGCTAGGTGGAATAGGGTTAGGACAGTCTGTCCCAAGCATGAGCGCATTCGTGAAGGCTAAAGTTGCAGCCGCAAAGATTTTCAAAATTATTGATCACAAACCAGGCATGGACCGGAATAGCGAAGCAGGAATGGAATTAGAGTCCGTTACAGGACTAGTTGAGCTGAAAAATGTTGATTTTTCCTACCCTTCGAGGCAGGATGATCGTATCCTCAACAATTTCTCGCTTAATGTTCCAGCTGGAAAGACCATTGCTTTGGTTGGTAGCAGTGGCTCTGGTAAGAGCACTGTGGTCTCTCTCATTGAGAGGTTTTACGATCCTTCCTCAGGACAAGTGCTGCTAGATGGACATGACATAAAGACATTGAAACTAAAGTGGCTGAGGCAGCAAATAGGGCTTGTGAGCCAAGAACCAGCTCTGTTTGCTACCACCATTAAAGAAAATATACTTTTGGGCAGGCCGGATGCGGACCAAGTTGAGATCGAAGAAGCCTCCAGAGTTGCCAATGCCCATTCATTCATTATCAAACTTCCTGCTGGTTTTGATACTCAGGTAGGGGAGAGAGGACTGCAGTTGTCTGGAGGACAGAAGCAGAGAATAGCCATAGCTAGGGCAATGCTGAAAAACCCAGCAATCCTGCTCTTAGACGAGGCAACAAGTGCATTGGACTCTGAGTCGGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTTATGATTGGAAGGACAACTCTCGTCATTGCCCATCGCCTTTCAACCATTCGCAAAGCTGACCTTGTAGCTGTTCTCCAACAAGGAAGTGTTTCTGAAATTGGAACCCATGATGAACTTTTCTCGAAGGGAGAAAACGGTGTCTATGCCAAGCTCATTCGGATGCAAGAGATGGCACATGAAACTGCTCTCAACAATGCGAGAAAGAGTAGCGCAAGGCCTTCTAGTGCCAGAAACTCTGTAAGCTCACCTATAATTGCCAGAAATTCCTCATATGGTCGATCACCTTACTCACGTCGGCTATCAGACTTTTCTACTTCTGATTTTAGTCTCTCCCTTGATGCCTCATATCCCAATTACCGGCATGAAAAACTACCCTTCAAGGAGCAAGCTAGTTCCTTCTGGCGCCTTGCTAAAATGAACTCTCCTGAATGGGTTTACGCTTTACTTGGGTCAGTTGGCTCTGTTGTTTGTGGTTCTCTAAGTGCTTTCTTTGCCTATGTTCTAAGTGCTGTCCTCAGTGTTTACTACAATCCGGACCATGCTTTCATGATCAAACAAATTAATAAGTACTGCTACTTGTTAATTGGACTTTCATCAGCTGCACTAATCTTCAACACGTTGCAACATTTCTTTTGGGATATTGTGGGAGAAAACCTCACAAAACGGGTGAGGGAGAAAATGCTGACAGCAGTTTTGAAAAATGAAATGGCTTGGTTTGATCAGGAGGAAAATGAGAGTGCCAGGATTTCAGCAAGGCTGGCTCTTGATGCCAACAATGTCAGATCAGCTATCGGAGACAGGATTTCTGTGATTGTACAGAACACAGCACTCATGCTTGTTGCTTGCACTGCGGGATTTGTTTTGCAATGGCGCCTTGCCCTTGTCCTCATAGCCGTCTTCCCTTTGGTTGTTGCAGCCACAGTTTTGCAGAAACTGTTCATGACGGGTTTCTCTGGAGACCTTGAAGCTGCACATGCCAAGGCCACCCAACTAGCTGGGGAGGCCATAGCCAATGTAAGGACTGTTGCTGCATTTAATTCAGAGGGAAAAATTGTTGGTCTTTTCACCAGAAACCTCCAGATTCCACTACGCCGGTGCTTTTGGAAGGGCCAGATTGCTGGAATTGGATTTGGGATAGCTCAGTTTGCACTTTATGCTTCCTATGCTCTAGGTCTTTGGTATGCTTCCTGGCTAGTAAAGCATGGAATCTCCGACTTCTCAAAGACAATCCGAGTTTTCATGGTCCTCATGGTGTCTGCAAATGGTGCAGCAGAAACATTGACCCTGGCACCTGACTTTATCAAAGGTGGTCGAGCCATGCGATCAGTGTTTGAACTCCTTGACCGCAAAACTGAAATTGAACCTGATGATCCAGATGCTACTGTAGTCCCTGATCGTCTGCGTGGGGAAATTGAATTGAAGCATGTAGACTTTACTTACCCTACTCGCCCTGATGTCCCTATTTTCCGTGACCTCTCCCTCCGTGCCCGAGCAGGCAAGACTCTTGCCCTTGTTGGTCCTAGTGGATGTGGTAAGAGTTCAGTCATTGCGCTGATACAGCGATTCTACGACCCAACATCAGGACGAGTTATGATTGATGGGAAGGATATTCGAAAATACAATCTGAAGTCCCTAAGAAGGCACATTGCCGTGGTTCCACAGGAGCCATGCCTCTTTGCTACAACCATATACGAAAATATTGCTTATGGACACGAGTCAGCAACTGAGGCTGAGATCATTGAAGCTGCAAATCTGGCTAACGCTCACAAGTTCATATCTGCATTGCCGGAGGGATACAAAACATTTGTTGGGGAACGGGGAGTTCAGTTATCTGGAGGACAGAAACAAAGAGTTGCAATTGCCAGGGCTTTATTGAGGAAGGCAGAGGTTATGCTTCTTGATGAGGCAACAAGCGCACTTGATGCTGAGTCGGAGAGCTCTATTCAAGAGGCACTAGAGCGTGCTTGCTCGGGAAAAACCACAATTGTGGTTGCACACAGACTATCAACTATCAGAAATGCGCATGTCATTGCAGTGATTGATGATGGAAAGGTGGCAGAGCAAGGATCGATCCACTCCCATCTATTGAAAAATTACCCGGATGGGTGTTATGCGCGCATGATACAGCTACAAAGATTCACGCACACCCAAGCCATCGGAATTGCATCAGGTTCAAGTTCATCAATAAAACCGCGAGAAGAGGAAGAAAGAGAAGGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0008150 GO:0008361 GO:0009314 GO:0009411 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009607 GO:0009624 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009639 GO:0009640 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009966 GO:0009987 GO:0010033 GO:0010315 GO:0010328 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0015399 GO:0015405 GO:0015562 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0023051 GO:0030054 GO:0032501 GO:0032502 GO:0032535 GO:0042221 GO:0042623 GO:0042626 GO:0043207 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0043492 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048583 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0060918 GO:0060919 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080161 GO:0090066 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1355

Amino Acids

148.1

Weight (kDa)

8.33

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	108 - 378	1.2e-50	ABC transporter transmembrane region
ABC_tran	PF00005	448 - 597	5.7e-35	ABC transporter
ABC_membrane	PF00664	764 - 1032	1.7e-52	ABC transporter transmembrane region
ABC_tran	PF00005	1104 - 1252	3.4e-35	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36910
fragaria_vesca	FvH4_6g16450 FvH4_6g16450 FvH4_6g16450
malus_domestica	MD04G1092800.v1.1
prunus_persica	Prupe.7G129600_v2.0.a1
pyrus_communis	pycom04g08730 pycom04g08740 pycom12g11150
rosa_chinensis	RchiOBHm_Chr3g0470311
rosa_laevigata	RLG00000024279
rosa_multiflora	Rmu_sc0001093.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410950
rosa_rugosa	Rorug03G0108000
rosa_samantha	Rh3AG157800 Rh3BG182100 Rh3DG192800
rosa_wichuraiana	Rw3G015010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	627
Acc16I	TGCGCA	1 cut(s)	3864
Acc36I	ACCTGC	1 cut(s)	268
AccB1I	GGYRCC	4 cut(s)	1080, 2244, 2712, 3130
AccBSI	CCGCTC	1 cut(s)	535
AccI	GTMKAC	1 cut(s)	3270
AccII	CGCG	3 cut(s)	407, 3958, 4036
AccIII	TCCGGA	1 cut(s)	2374
AclWI	GGATC	5 cut(s)	83, 1442, 3206, 3907, 3916
AcsI	RAATTY	2 cut(s)	894, 2104
AcuI	CTGAAG	3 cut(s)	36, 268, 3488
AcyI	GRCGYC	3 cut(s)	624, 2245, 2713
AfaI	GTAC	6 cut(s)	452, 461, 563, 596, 2411, 2658
AfeI	AGCGCT	1 cut(s)	933
AfiI	CCNNNNNNNGG	8 cut(s)	534, 1457, 1740, 1836, 2199, 2859, 3422, 3480
AflIII	ACRYGT	1 cut(s)	2457
AgeI	ACCGGT	1 cut(s)	1836
AhdI	GACNNNNNGTC	2 cut(s)	1157, 1804
AhlI	ACTAGT	1 cut(s)	1285
AjiI	CACGTC	1 cut(s)	2135
AjnI	CCWGG	7 cut(s)	582, 660, 1231, 2582, 3029, 3126, 3704
AleI	CACNNNNGTG	1 cut(s)	3827
Alw21I	GWGCWC	3 cut(s)	200, 1418, 3782
Alw26I	GTCTC	4 cut(s)	1429, 2174, 2631, 2793
AlwI	GGATC	5 cut(s)	83, 1442, 3206, 3907, 3916
AlwNI	CAGNNNCTG	2 cut(s)	2776, 3566
Ama87I	CYCGRG	2 cut(s)	3330, 3811
Aor13HI	TCCGGA	1 cut(s)	2374
Aor51HI	AGCGCT	1 cut(s)	933
AoxI	GGCC	6 cut(s)	501, 1589, 2057, 2823, 2844, 2950
ApoI	RAATTY	2 cut(s)	894, 2104
ArsI	GACNNNNNNTTYG	6 cut(s)	614, 646, 1369, 1401, 2518, 2550
AseI	ATTAAT	1 cut(s)	2403
AsiGI	ACCGGT	1 cut(s)	1836
Asp700I	GAANNNNTTC	2 cut(s)	1930, 2777
AsuC2I	CCSGG	1 cut(s)	3941
AsuHPI	GGTGA	6 cut(s)	805, 1081, 2079, 2115, 2521, 2899
AsuII	TTCGAA	1 cut(s)	3454
AvaI	CYCGRG	2 cut(s)	3330, 3811
AvaII	GGWCC	8 cut(s)	48, 525, 658, 1240, 1600, 2377, 3085, 3359
AxyI	CCTNAGG	1 cut(s)	1456
BaeGI	GKGCMC	1 cut(s)	3331
BaeI	ACNNNNGTAYC	2 cut(s)	1668, 1701
BanI	GGYRCC	4 cut(s)	1080, 2244, 2712, 3130
BanII	GRGCYC	4 cut(s)	200, 207, 1011, 3782
BarI	GAAGNNNNNNTAC	2 cut(s)	962, 994
BauI	CACGAG	1 cut(s)	3554
BbsI	GAAGAC	1 cut(s)	2731
Bbv12I	GWGCWC	3 cut(s)	200, 1418, 3782
BbvCI	CCTCAGC	1 cut(s)	1511
BceAI	ACGGC	4 cut(s)	147, 1109, 2720, 3476
BcgI	CGANNNNNNTGC	6 cut(s)	930, 964, 1316, 1350, 3524, 3558
BciT130I	CCWGG	7 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706
BciVI	GTATCC	2 cut(s)	1349, 3629
BclI	TGATCA	3 cut(s)	1222, 2391, 2560
BcnI	CCSGG	1 cut(s)	3941
BcoDI	GTCTC	4 cut(s)	1429, 2174, 2631, 2793
BcuI	ACTAGT	1 cut(s)	1285
BfmI	CTRYAG	4 cut(s)	261, 885, 1700, 3225
BfoI	RGCGCY	3 cut(s)	935, 2248, 2716
BfuAI	ACCTGC	1 cut(s)	268
BfuI	GTATCC	2 cut(s)	1349, 3629
BmcAI	AGTACT	2 cut(s)	596, 2411
Bme1390I	CCNGG	8 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706, 3941
Bme18I	GGWCC	8 cut(s)	48, 525, 658, 1240, 1600, 2377, 3085, 3359
BmeRI	GACNNNNNGTC	2 cut(s)	1157, 1804
BmeT110I	CYCGRG	2 cut(s)	3330, 3811
BmgBI	CACGTC	1 cut(s)	2135
BmiI	GGNNCC	8 cut(s)	802, 1082, 1945, 2246, 2714, 3132, 3498, 3507
BmrFI	CCNGG	8 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706, 3941
BoxI	GACNNNNGTC	1 cut(s)	3556
BpiI	GAAGAC	1 cut(s)	2731
BplI	GAGNNNNNCTC	2 cut(s)	2481, 2513
BpmI	CTGGAG	5 cut(s)	1609, 1731, 2817, 2903, 3696
Bpu10I	CCTNAGC	1 cut(s)	1511
Bpu14I	TTCGAA	1 cut(s)	3454
BpuEI	CTTGAG	2 cut(s)	86, 587
BpuMI	CCSGG	1 cut(s)	3941
Bsa29I	ATCGAT	1 cut(s)	3911
BsaHI	GRCGYC	3 cut(s)	624, 2245, 2713
BsaI	GGTCTC	2 cut(s)	1429, 2793
BsaJI	CCNNGG	5 cut(s)	948, 2820, 3126, 3492, 3705
BsaWI	WCCGGW	5 cut(s)	372, 527, 1242, 1836, 2374
BsaXI	ACNNNNNCTCC	6 cut(s)	130, 154, 160, 184, 327, 357
Bsc4I	CCNNNNNNNGG	8 cut(s)	534, 1457, 1740, 1836, 2199, 2859, 3422, 3480
Bse118I	RCCGGY	4 cut(s)	221, 1836, 2199, 2934
Bse21I	CCTNAGG	1 cut(s)	1456
Bse3DI	GCAATG	8 cut(s)	1380, 1752, 1866, 2714, 3387, 3486, 3623, 3870
BseAI	TCCGGA	1 cut(s)	2374
BseBI	CCWGG	7 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706
BseCI	ATCGAT	1 cut(s)	3911
BseDI	CCNNGG	5 cut(s)	948, 2820, 3126, 3492, 3705
BseGI	GGATG	8 cut(s)	525, 617, 670, 1336, 1600, 2007, 3374, 3949
BseLI	CCNNNNNNNGG	8 cut(s)	534, 1457, 1740, 1836, 2199, 2859, 3422, 3480
BseMI	GCAATG	8 cut(s)	1380, 1752, 1866, 2714, 3387, 3486, 3623, 3870
BsePI	GCGCGC	1 cut(s)	3956
BseRI	GAGGAG	1 cut(s)	937
BseSI	GKGCMC	1 cut(s)	3331
BseYI	CCCAGC	2 cut(s)	1759, 2837
BsgI	GTGCAG	3 cut(s)	2427, 2796, 3129
Bsh1236I	CGCG	3 cut(s)	407, 3958, 4036
BshFI	GGCC	6 cut(s)	503, 1591, 2059, 2825, 2846, 2952
BshNI	GGYRCC	4 cut(s)	1080, 2244, 2712, 3130
BshTI	ACCGGT	1 cut(s)	1836
BshVI	ATCGAT	1 cut(s)	3911
BsiHKAI	GWGCWC	3 cut(s)	200, 1418, 3782
BsiHKCI	CYCGRG	2 cut(s)	3330, 3811
BslFI	GGGAC	4 cut(s)	1145, 3215, 3284, 3457
BslI	CCNNNNNNNGG	8 cut(s)	534, 1457, 1740, 1836, 2199, 2859, 3422, 3480
BsmAI	GTCTC	4 cut(s)	1429, 2174, 2631, 2793
BsmFI	GGGAC	4 cut(s)	1145, 3215, 3284, 3457
BsmI	GAATGC	2 cut(s)	415, 1175
BsnI	GGCC	6 cut(s)	503, 1591, 2059, 2825, 2846, 2952
Bso31I	GGTCTC	2 cut(s)	1429, 2793
BsoBI	CYCGRG	2 cut(s)	3330, 3811
Bsp119I	TTCGAA	1 cut(s)	3454
Bsp1286I	GDGCHC	6 cut(s)	200, 207, 1011, 1418, 3331, 3782
Bsp13I	TCCGGA	1 cut(s)	2374
Bsp1407I	TGTACA	1 cut(s)	2656
BspANI	GGCC	6 cut(s)	503, 1591, 2059, 2825, 2846, 2952
BspDI	ATCGAT	1 cut(s)	3911
BspEI	TCCGGA	1 cut(s)	2374
BspFNI	CGCG	3 cut(s)	407, 3958, 4036
BspHI	TCATGA	2 cut(s)	2388, 2781
BspLI	GGNNCC	8 cut(s)	802, 1082, 1945, 2246, 2714, 3132, 3498, 3507
BspMAI	CTGCAG	2 cut(s)	265, 1704
BspMI	ACCTGC	1 cut(s)	268
BspPI	GGATC	5 cut(s)	83, 1442, 3206, 3907, 3916
BspT104I	TTCGAA	1 cut(s)	3454
BspT107I	GGYRCC	4 cut(s)	1080, 2244, 2712, 3130
BspTNI	GGTCTC	2 cut(s)	1429, 2793
BsrBI	CCGCTC	1 cut(s)	535
BsrDI	GCAATG	8 cut(s)	1380, 1752, 1866, 2714, 3387, 3486, 3623, 3870
BsrFI	RCCGGY	4 cut(s)	221, 1836, 2199, 2934
BsrGI	TGTACA	1 cut(s)	2656
BssAI	RCCGGY	4 cut(s)	221, 1836, 2199, 2934
BssECI	CCNNGG	5 cut(s)	948, 2820, 3126, 3492, 3705
BssHII	GCGCGC	1 cut(s)	3956
BssNI	GRCGYC	3 cut(s)	624, 2245, 2713
BssSI	CACGAG	1 cut(s)	3554
BssT1I	CCWWGG	1 cut(s)	2820
Bst2BI	CACGAG	1 cut(s)	3554
Bst2UI	CCWGG	7 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706
Bst6I	CTCTTC	2 cut(s)	287, 4035
BstACI	GRCGYC	3 cut(s)	624, 2245, 2713
BstAPI	GCANNNNNTGC	4 cut(s)	1790, 2996, 3107, 3764
BstAUI	TGTACA	1 cut(s)	2656
BstBI	TTCGAA	1 cut(s)	3454
BstC8I	GCNNGC	8 cut(s)	1589, 2229, 2601, 2686, 3337, 3804, 3808, 3958
BstDSI	CCRYGG	1 cut(s)	3492
BstENI	CCTNNNNNAGG	1 cut(s)	1455
BstF5I	GGATG	8 cut(s)	525, 617, 670, 1336, 1600, 2007, 3374, 3949
BstFNI	CGCG	3 cut(s)	407, 3958, 4036
BstH2I	RGCGCY	3 cut(s)	935, 2248, 2716
BstMAI	GTCTC	4 cut(s)	1429, 2174, 2631, 2793
BstNI	CCWGG	7 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706
BstNSI	RCATGY	3 cut(s)	2819, 3269, 3869
BstPAI	GACNNNNGTC	1 cut(s)	3556
BstSCI	CCNGG	8 cut(s)	582, 660, 1231, 2582, 3029, 3126, 3704, 3939
BstSFI	CTRYAG	4 cut(s)	261, 885, 1700, 3225
BstSLI	GKGCMC	1 cut(s)	3331
BstUI	CGCG	3 cut(s)	407, 3958, 4036
BstV2I	GAAGAC	1 cut(s)	2731
BstXI	CCANNNNNNTGG	4 cut(s)	1387, 2837, 2960, 3829
Bsu15I	ATCGAT	1 cut(s)	3911
Bsu36I	CCTNAGG	1 cut(s)	1456
BsuI	GTATCC	2 cut(s)	1349, 3629
BsuRI	GGCC	6 cut(s)	503, 1591, 2059, 2825, 2846, 2952
BsuTUI	ATCGAT	1 cut(s)	3911
BtgI	CCRYGG	1 cut(s)	3492
BtgZI	GCGATG	1 cut(s)	1859
BtrI	CACGTC	1 cut(s)	2135
BtsCI	GGATG	8 cut(s)	525, 617, 670, 1336, 1600, 2007, 3374, 3949
BtsI	GCAGTG	5 cut(s)	44, 657, 1405, 2688, 3882
BtsIMutI	CAGTG	9 cut(s)	44, 603, 657, 1405, 1416, 2365, 2688, 3174, 3882
BveI	ACCTGC	1 cut(s)	268
Cac8I	GCNNGC	8 cut(s)	1589, 2229, 2601, 2686, 3337, 3804, 3808, 3958
CaiI	CAGNNNCTG	2 cut(s)	2776, 3566
CciI	TCATGA	2 cut(s)	2388, 2781
Cfr10I	RCCGGY	4 cut(s)	221, 1836, 2199, 2934
ClaI	ATCGAT	1 cut(s)	3911
Csp6I	GTAC	6 cut(s)	451, 460, 562, 595, 2410, 2657
CspAI	ACCGGT	1 cut(s)	1836
CspCI	CAANNNNNGTGG	2 cut(s)	1102, 1137
CviQI	GTAC	6 cut(s)	451, 460, 562, 595, 2410, 2657
DinI	GGCGCC	2 cut(s)	2246, 2714
DraI	TTTAAA	1 cut(s)	97
DriI	GACNNNNNGTC	2 cut(s)	1157, 1804
Eam1104I	CTCTTC	2 cut(s)	287, 4035
Eam1105I	GACNNNNNGTC	2 cut(s)	1157, 1804
EarI	CTCTTC	2 cut(s)	287, 4035
Ecl136II	GAGCTC	2 cut(s)	198, 3780
Eco130I	CCWWGG	1 cut(s)	2820
Eco147I	AGGCCT	1 cut(s)	2059
Eco24I	GRGCYC	4 cut(s)	200, 207, 1011, 3782
Eco31I	GGTCTC	2 cut(s)	1429, 2793
Eco47I	GGWCC	8 cut(s)	48, 525, 658, 1240, 1600, 2377, 3085, 3359
Eco47III	AGCGCT	1 cut(s)	933
Eco53kI	GAGCTC	2 cut(s)	198, 3780
Eco57I	CTGAAG	3 cut(s)	36, 268, 3488
Eco81I	CCTNAGG	1 cut(s)	1456
Eco88I	CYCGRG	2 cut(s)	3330, 3811
EcoICRI	GAGCTC	2 cut(s)	198, 3780
EcoNI	CCTNNNNNAGG	1 cut(s)	1455
EcoRII	CCWGG	7 cut(s)	582, 660, 1231, 2582, 3029, 3126, 3704
EcoT14I	CCWWGG	1 cut(s)	2820
EcoT38I	GRGCYC	4 cut(s)	200, 207, 1011, 3782
EgeI	GGCGCC	2 cut(s)	2246, 2714
EheI	GGCGCC	2 cut(s)	2246, 2714
ErhI	CCWWGG	1 cut(s)	2820
FalI	AAGNNNNNCTT	8 cut(s)	266, 298, 837, 869, 1815, 1847, 1887, 1919
FaqI	GGGAC	4 cut(s)	1145, 3215, 3284, 3457
FauI	CCCGC	1 cut(s)	2686
FauNDI	CATATG	1 cut(s)	2113
FbaI	TGATCA	3 cut(s)	1222, 2391, 2560
FblI	GTMKAC	1 cut(s)	3270
FokI	GGATG	8 cut(s)	532, 604, 677, 1343, 1607, 2014, 3381, 3956
FriOI	GRGCYC	4 cut(s)	200, 207, 1011, 3782
FspAI	RTGCGCAY	1 cut(s)	3864
FspI	TGCGCA	1 cut(s)	3864
GsaI	CCCAGC	2 cut(s)	1763, 2841
GsuI	CTGGAG	5 cut(s)	1609, 1731, 2817, 2903, 3696
HaeII	RGCGCY	3 cut(s)	935, 2248, 2716
HaeIII	GGCC	6 cut(s)	503, 1591, 2059, 2825, 2846, 2952
Hin1I	GRCGYC	3 cut(s)	624, 2245, 2713
HindIII	AAGCTT	1 cut(s)	971
HphI	GGTGA	6 cut(s)	805, 1081, 2079, 2115, 2521, 2899
Hpy166II	GTNNAC	4 cut(s)	525, 2278, 2365, 3271
Hpy8I	GTNNAC	4 cut(s)	525, 2278, 2365, 3271
Hpy99I	CGWCG	4 cut(s)	236, 626, 629, 2139
HpyCH4IV	ACGT	6 cut(s)	309, 588, 624, 915, 2134, 2459
HpySE526I	ACGT	6 cut(s)	309, 588, 624, 915, 2134, 2459
Hsp92I	GRCGYC	3 cut(s)	624, 2245, 2713
KasI	GGCGCC	2 cut(s)	2244, 2712
Kpn2I	TCCGGA	1 cut(s)	2374
Ksp22I	TGATCA	3 cut(s)	1222, 2391, 2560
LmnI	GCTCC	7 cut(s)	203, 335, 476, 800, 1013, 2224, 3505
MaeII	ACGT	6 cut(s)	309, 588, 624, 915, 2134, 2459
MaeIII	GTNAC	5 cut(s)	3, 763, 977, 1276, 3311
MbiI	CCGCTC	1 cut(s)	535
MboII	GAAGA	8 cut(s)	274, 370, 1043, 1628, 2443, 2731, 4052, 4058
MfeI	CAATTG	3 cut(s)	321, 3699, 3825
MhlI	GDGCHC	6 cut(s)	200, 207, 1011, 1418, 3331, 3782
Mly113I	GGCGCC	2 cut(s)	2245, 2713
MlyI	GAGTC	7 cut(s)	260, 1280, 1793, 1814, 3337, 3566, 3779
MmeI	TCCRAC	9 cut(s)	282, 313, 454, 497, 645, 1788, 1942, 3078, 3753
MroI	TCCGGA	1 cut(s)	2374
MroXI	GAANNNNTTC	2 cut(s)	1930, 2777
MseI	TTAA	7 cut(s)	96, 393, 1359, 1566, 2403, 2423, 2877
MslI	CAYNNNNRTG	4 cut(s)	2000, 3491, 3827, 3875
MspA1I	CMGCKG	3 cut(s)	784, 1370, 2441
MspR9I	CCNGG	8 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706, 3941
MunI	CAATTG	3 cut(s)	321, 3699, 3825
Mva1269I	GAATGC	2 cut(s)	415, 1175
MvaI	CCWGG	7 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706
MvnI	CGCG	3 cut(s)	407, 3958, 4036
NarI	GGCGCC	2 cut(s)	2245, 2713
NciI	CCSGG	1 cut(s)	3941
NdeI	CATATG	1 cut(s)	2113
NlaIV	GGNNCC	8 cut(s)	802, 1082, 1945, 2246, 2714, 3132, 3498, 3507
NmeAIII	GCCGAG	2 cut(s)	529, 929
NmuCI	GTSAC	3 cut(s)	3, 763, 3311
NsbI	TGCGCA	1 cut(s)	3864
NspI	RCATGY	3 cut(s)	2819, 3269, 3869
NspV	TTCGAA	1 cut(s)	3454
OliI	CACNNNNGTG	1 cut(s)	3827
PagI	TCATGA	2 cut(s)	2388, 2781
PauI	GCGCGC	1 cut(s)	3956
PceI	AGGCCT	1 cut(s)	2059
PcsI	WCGNNNNNNNCGW	2 cut(s)	339, 3160
PctI	GAATGC	2 cut(s)	415, 1175
PdmI	GAANNNNTTC	2 cut(s)	1930, 2777
PfeI	GAWTC	9 cut(s)	11, 215, 288, 723, 923, 2923, 3048, 3405, 3978
PfoI	TCCNGGA	1 cut(s)	660
PinAI	ACCGGT	1 cut(s)	1836
PleI	GAGTC	7 cut(s)	259, 1279, 1793, 1813, 3337, 3565, 3778
PluTI	GGCGCC	2 cut(s)	2248, 2716
PpsI	GAGTC	7 cut(s)	259, 1279, 1793, 1813, 3337, 3565, 3778
PshAI	GACNNNNGTC	1 cut(s)	3556
PshBI	ATTAAT	1 cut(s)	2403
Psp124BI	GAGCTC	2 cut(s)	200, 3782
Psp6I	CCWGG	7 cut(s)	582, 660, 1231, 2582, 3029, 3126, 3704
PspFI	CCCAGC	2 cut(s)	1759, 2837
PspGI	CCWGG	7 cut(s)	582, 660, 1231, 2582, 3029, 3126, 3704
PspN4I	GGNNCC	8 cut(s)	802, 1082, 1945, 2246, 2714, 3132, 3498, 3507
PstI	CTGCAG	2 cut(s)	265, 1704
PstNI	CAGNNNCTG	2 cut(s)	2776, 3566
PteI	GCGCGC	1 cut(s)	3956
PvuII	CAGCTG	2 cut(s)	1370, 2441
RsaI	GTAC	6 cut(s)	452, 461, 563, 596, 2411, 2658
RsaNI	GTAC	6 cut(s)	451, 460, 562, 595, 2410, 2657
RseI	CAYNNNNRTG	4 cut(s)	2000, 3491, 3827, 3875
SacI	GAGCTC	2 cut(s)	200, 3782
SaqAI	TTAA	7 cut(s)	96, 393, 1359, 1566, 2403, 2423, 2877
ScaI	AGTACT	2 cut(s)	596, 2411
SchI	GAGTC	7 cut(s)	260, 1280, 1793, 1814, 3337, 3566, 3779
ScrFI	CCNGG	8 cut(s)	584, 662, 1233, 2584, 3031, 3128, 3706, 3941
SduI	GDGCHC	6 cut(s)	200, 207, 1011, 1418, 3331, 3782
SfcI	CTRYAG	4 cut(s)	261, 885, 1700, 3225
SfoI	GGCGCC	2 cut(s)	2246, 2714
SfuI	TTCGAA	1 cut(s)	3454
SgrAI	CRCCGGYG	2 cut(s)	221, 2934
SinI	GGWCC	8 cut(s)	48, 525, 658, 1240, 1600, 2377, 3085, 3359
SmiMI	CAYNNNNRTG	4 cut(s)	2000, 3491, 3827, 3875
SmlI	CTYRAG	2 cut(s)	65, 566
SmoI	CTYRAG	2 cut(s)	65, 566
SpeI	ACTAGT	1 cut(s)	1285
SseBI	AGGCCT	1 cut(s)	2059
SspDI	GGCGCC	2 cut(s)	2244, 2712
SspI	AATATT	1 cut(s)	3541
SstI	GAGCTC	2 cut(s)	200, 3782
StuI	AGGCCT	1 cut(s)	2059
StyD4I	CCNGG	8 cut(s)	582, 660, 1231, 2582, 3029, 3126, 3704, 3939
StyI	CCWWGG	1 cut(s)	2820
TaiI	ACGT	6 cut(s)	312, 591, 627, 918, 2137, 2462
TaqI	TCGA	9 cut(s)	898, 926, 1322, 1614, 1964, 2119, 3154, 3454, 3911
TatI	WGTACW	4 cut(s)	459, 594, 2409, 2656
TauI	GCSGC	5 cut(s)	228, 231, 494, 538, 1202
TfiI	GAWTC	9 cut(s)	11, 215, 288, 723, 923, 2923, 3048, 3405, 3978
Tru1I	TTAA	7 cut(s)	96, 393, 1359, 1566, 2403, 2423, 2877
Tru9I	TTAA	7 cut(s)	96, 393, 1359, 1566, 2403, 2423, 2877
TscAI	CASTG	9 cut(s)	44, 610, 657, 1405, 1423, 2365, 2695, 3174, 3882
TseFI	GTSAC	3 cut(s)	3, 763, 3311
Tsp45I	GTSAC	3 cut(s)	3, 763, 3311
TspGWI	ACGGA	3 cut(s)	1264, 3299, 3314
TspRI	CASTG	9 cut(s)	44, 610, 657, 1405, 1423, 2365, 2695, 3174, 3882
VpaK11BI	GGWCC	8 cut(s)	48, 525, 658, 1240, 1600, 2377, 3085, 3359
VspI	ATTAAT	1 cut(s)	2403
XagI	CCTNNNNNAGG	1 cut(s)	1455
XapI	RAATTY	2 cut(s)	894, 2104
XceI	RCATGY	3 cut(s)	2819, 3269, 3869
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1091
XmiI	GTMKAC	1 cut(s)	3270
XmnI	GAANNNNTTC	2 cut(s)	1930, 2777
ZraI	GACGTC	1 cut(s)	625
ZrmI	AGTACT	2 cut(s)	596, 2411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.