pycom13g01730

Protein VAC14 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0012295
Physical Location & Seq
Forward (+)
1146208 .. 1152411
6204 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g01730.11

Sequence Viewer

Length: 2196 bp
ATGGCCGACGGTCTTTCAGTGATTCCCGCGGGCGTCCTCCGCAACCTCGCGGACAAGCTCTATGAGAAGCGCAAGAATGCCGCTCTTGAGGTTGAGGGAATAGTGAAGCAGCTCACGACGGCTGGGGAGCATGATAAGATTACGGCGGCGATCAATTTGCTCACTACGGAATTCACTTACTCGCCGCAAGCCAACCACCGGAAGGGAGGATTGATAGGATTAGCTGCTGCAACAGTTGGGTTGACCAGTGAAGCGGCTCAGCATCTTGAGCAAATTGTGCCTCCTGTGCTTAATTCCTTTTCGGACCATGATAGCAGAGTTCGTTATTATGCTTGTGAAGCTCTATATAACATTGCAAAGGTTGTAAGAGGAGATTTCATCATATTCTTTAATCAGATATTTGATGCCTTGTGTAAGCTTTCAGCGGATTCCGATGCTAATGTACAAAGTGCTGCTCATCTTTTAGATCGGCTTGTAAAGGATATTGTTACTGAAAGTGATCAATTCAGCATTGAAGAATTTATTCCACTGTTGAGGGAGCGTATGAATGTCCTGAATCCCTATGTCCGTCAGTTTTTGGTTGGATGGATCGATCGCCGCCGTAATACTGTCCTAGACAGTGTTCCAGATATTGACATGCTGGGATTTCTTCCTGATTTTCTTGATGGCTTGTTCAATATGTTAAGTGATTCAAGCCATGAGATTAGACAACAAGCTGATTCAGCACTTTCAGAGTTTCTCCAGGAGATCAAGAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATACTGGTACAGAGAGCTGCTTCGCCGGATGAATTTACTCGGTTAACAGCTATCACATGGATAAATGAATTTGTAAAACTTGGTGGGGACCAGCTTGTTCCCTATTATGCTGATATTCTGGGAGCAATTCTACCCTGCATATCTGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGAAACCAATGAGGAGCTTCGTGCCATTAAGGCTGATCCAGCTGAAGGATTTGACGTTGGAGCAATCCTCTCTATTGCAAGGAGGCAATTATCTAGTGAATGGGAGGCTACTAGAATCGAAGCACTGCACTGGATTTCAAACCTTTTAAACAGACATCGTGCTGAGGTTCTAAGTTTTCTGAACGACATATTTGACACCCTTTTGGAAGCACTCTCAGATGCTTCTGATCAGGTGGTTCTCTTGGTCCTAGAAGTTCATGCATGCATAGCAAAAGATCCACAACACTTTCACCAGCTTGTTGTGTTCCTTGTGCATAATTTTCATGTGGACAACTCTCTTCTAGAGAAACGTGGTGCGTTGATTATTCGCCGACTTTGTGTGCTTTTAGATGCTGAAAGGGTCTACCGAGAACTGTCTACTATACTAGATGGAGAGTCAGACCTGGATTTTGCATCTGTTATGGTTCAGGCTTTGAACTTTATTTTACTTACATCCTCTGAGTTGGCTGAGCTTCGAGATCTTTTGAAAAGGTCACTTGTGAATCCTTCTGGGAAAGACTTATTTGTTTCCTTATATGCTTCATGGTGCCATTCACCCATGGCAATTATAAGCCTCTGCTTATTAGCTCAGACATATCAGCATGCAAGTACCGTGATTCAGTCTCTGGTGGAAGAAGATATTAATGTCAAGTTTTTGGTCCAGCTGGATAAATTGATTCGGTTACTAGAAACTCCAATCTTTGCGTATCTTAGATTACAGCTTCTTGAACCTGGAAGACATATATGGTTGTTAAAAGCATTATATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAAATTCTGAGGACGCGTTTAAAAACTGTACCTTCATACTCATTCGACAGTGAGCAACTCAGACAAACTTCTTCAGGGAATCCCCATCAGATTCTACATCACATGCCAAGTGGTTCGCAGATCACTGAAGACGGTGACATAAACCAGGACAGTAAGAGTTCTCATAATGGAATTAACTTTACTTTAGGACTACGGCAGTTTGAGCAAATGCAGCAGCAACATCGTCAACATGCAAAGGTGCAGGCACAATCACAAAGAACTTCCACAGCTTCTTCAACACCGAAGGATGTGCAGAGACCAGAAGAACAAAGCCATAGCCGATCTTCATTAGACGTGATCAGGGCGCCTTCCAGATCTCGGAGGGCCCCGGGCCAGTTACAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05166 ko05203 map05166 map05203
Pfam Domains
Protein Families
Vac14_Fab1_bd Vac14_Fig4_bd

Protein Analysis

732

Amino Acids

82.22

Weight (kDa)

5.67

Isoelectric Point (pI)

49.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012295)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01690 AT2G01690
fragaria_vesca FvH4_4g33570 FvH4_4g33570
malus_domestica MD13G1020500.v1.1 MD16G1018900.v1.1
prunus_persica Prupe.1G333200_v2.0.a1
pyrus_communis pycom13g01730 pycom16g01700
rosa_chinensis RchiOBHm_Chr4g0443071
rosa_laevigata RLG00000005956
rosa_multiflora Rmu_sc0008069.1_g000004
rosa_roxburghii Rroxscaffold_5G00383700
rosa_rugosa Rorug04G0344200 Rorug04G0344200
rosa_samantha Rh4BG410000 Rh4CG425500 Rh4DG404900
rosa_wichuraiana Rw4G034340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1574, 2194
AccB1I GGYRCC 2 cut(s) 1551, 2152
AccBSI CCGCTC 1 cut(s) 83
AccI GTMKAC 2 cut(s) 1368, 1382
AccII CGCG 3 cut(s) 29, 50, 1825
AclWI GGATC 3 cut(s) 596, 995, 1235
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 5 cut(s) 170, 518, 821, 857, 1812
AcuI CTGAAG 3 cut(s) 1029, 1866, 1956
AcyI GRCGYC 2 cut(s) 33, 2153
AfaI GTAC 4 cut(s) 444, 798, 1615, 1839
AfiI CCNNNNNNNGG 4 cut(s) 198, 202, 1010, 2166
AflIII ACRYGT 1 cut(s) 1823
AgsI TTSAA 8 cut(s) 515, 676, 693, 1104, 1441, 1492, 1733, 2085
AjiI CACGTC 1 cut(s) 2143
AjnI CCWGG 4 cut(s) 741, 1407, 1735, 1953
Alw26I GTCTC 2 cut(s) 1632, 2098
AlwI GGATC 3 cut(s) 596, 995, 1235
AlwNI CAGNNNCTG 1 cut(s) 1630
Ama87I CYCGRG 1 cut(s) 2176
AoxI GGCC 3 cut(s) 3, 2172, 2179
ApaI GGGCCC 1 cut(s) 2176
ApeKI GCWGC 7 cut(s) 109, 224, 227, 452, 806, 2020, 2023
ApoI RAATTY 5 cut(s) 170, 518, 821, 857, 1812
ArsI GACNNNNNNTTYG 2 cut(s) 1397, 1429
AseI ATTAAT 1 cut(s) 1647
Asp700I GAANNNNTTC 1 cut(s) 522
AspLEI GCGC 2 cut(s) 72, 2155
AspS9I GGNCC 7 cut(s) 304, 877, 1210, 1663, 2172, 2173, 2179
AsuC2I CCSGG 2 cut(s) 2177, 2178
AsuHPI GGTGA 3 cut(s) 1247, 1551, 1955
AvaI CYCGRG 1 cut(s) 2176
AvaII GGWCC 4 cut(s) 304, 877, 1210, 1663
BaeGI GKGCMC 1 cut(s) 2176
BanI GGYRCC 2 cut(s) 1551, 2152
BanII GRGCYC 1 cut(s) 2176
BauI CACGAG 1 cut(s) 963
BbsI GAAGAC 3 cut(s) 1747, 1766, 1944
BbvCI CCTCAGC 2 cut(s) 1128, 1791
BbvI GCAGC 7 cut(s) 121, 211, 214, 439, 793, 2032, 2035
BccI CCATC 5 cut(s) 579, 659, 769, 1388, 1902
BceAI ACGGC 4 cut(s) 135, 159, 585, 2018
BcgI CGANNNNNNTGC 6 cut(s) 139, 173, 2012, 2046, 2080, 2114
BciT130I CCWGG 4 cut(s) 743, 1409, 1737, 1955
BclI TGATCA 3 cut(s) 499, 1192, 2145
BcnI CCSGG 2 cut(s) 2177, 2178
BcoDI GTCTC 2 cut(s) 1632, 2098
BfaI CTAG 7 cut(s) 614, 1059, 1077, 1214, 1307, 1391, 1691
BfmI CTRYAG 1 cut(s) 765
BfoI RGCGCY 1 cut(s) 2156
BglI GCCNNNNNGGC 1 cut(s) 995
BglII AGATCT 2 cut(s) 1483, 2162
BlpI GCTNAGC 2 cut(s) 258, 1473
Bme1390I CCNGG 6 cut(s) 743, 1409, 1737, 1955, 2177, 2178
Bme18I GGWCC 4 cut(s) 304, 877, 1210, 1663
BmeT110I CYCGRG 1 cut(s) 2176
BmgBI CACGTC 1 cut(s) 2143
BmgT120I GGNCC 7 cut(s) 304, 877, 1210, 1663, 2172, 2173, 2179
BmiI GGNNCC 5 cut(s) 878, 1553, 2154, 2174, 2175
BmrFI CCNGG 6 cut(s) 743, 1409, 1737, 1955, 2177, 2178
BmsI GCATC 6 cut(s) 271, 394, 424, 1174, 1345, 1427
BpiI GAAGAC 3 cut(s) 1747, 1766, 1944
BplI GAGNNNNNCTC 2 cut(s) 1017, 1049
BpmI CTGGAG 1 cut(s) 725
Bpu10I CCTNAGC 2 cut(s) 1128, 1791
Bpu1102I GCTNAGC 2 cut(s) 258, 1473
BpuEI CTTGAG 2 cut(s) 107, 287
BpuMI CCSGG 2 cut(s) 2177, 2178
Bsa29I ATCGAT 1 cut(s) 591
BsaHI GRCGYC 2 cut(s) 33, 2153
BsaI GGTCTC 1 cut(s) 2098
BsaJI CCNNGG 4 cut(s) 27, 1563, 2175, 2176
BsaWI WCCGGW 1 cut(s) 198
Bsc4I CCNNNNNNNGG 4 cut(s) 198, 202, 1010, 2166
Bse1I ACTGG 4 cut(s) 246, 798, 1100, 2182
Bse3DI GCAATG 1 cut(s) 351
BseBI CCWGG 4 cut(s) 743, 1409, 1737, 1955
BseCI ATCGAT 1 cut(s) 591
BseDI CCNNGG 4 cut(s) 27, 1563, 2175, 2176
BseGI GGATG 4 cut(s) 590, 823, 1457, 2101
BseLI CCNNNNNNNGG 4 cut(s) 198, 202, 1010, 2166
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 9 cut(s) 272, 1119, 1194, 1455, 1464, 1607, 1805, 1808, 1882
BseNI ACTGG 4 cut(s) 246, 798, 1100, 2182
BseRI GAGGAG 2 cut(s) 384, 992
BseSI GKGCMC 1 cut(s) 2176
BseXI GCAGC 7 cut(s) 121, 211, 214, 439, 793, 2032, 2035
BseYI CCCAGC 2 cut(s) 122, 640
BsgI GTGCAG 3 cut(s) 1076, 2069, 2120
Bsh1236I CGCG 3 cut(s) 29, 50, 1825
Bsh1285I CGRYCG 1 cut(s) 595
BshFI GGCC 3 cut(s) 5, 2174, 2181
BshNI GGYRCC 2 cut(s) 1551, 2152
BshVI ATCGAT 1 cut(s) 591
BsiEI CGRYCG 1 cut(s) 595
BsiHKCI CYCGRG 1 cut(s) 2176
BsiSI CCGG 3 cut(s) 199, 815, 2177
BslFI GGGAC 1 cut(s) 890
BslI CCNNNNNNNGG 4 cut(s) 198, 202, 1010, 2166
BsmAI GTCTC 2 cut(s) 1632, 2098
BsmFI GGGAC 1 cut(s) 890
BsmI GAATGC 1 cut(s) 82
BsnI GGCC 3 cut(s) 5, 2174, 2181
Bso31I GGTCTC 1 cut(s) 2098
BsoBI CYCGRG 1 cut(s) 2176
Bsp120I GGGCCC 1 cut(s) 2172
Bsp1286I GDGCHC 1 cut(s) 2176
Bsp1407I TGTACA 1 cut(s) 442
Bsp1720I GCTNAGC 2 cut(s) 258, 1473
Bsp19I CCATGG 1 cut(s) 1563
BspANI GGCC 3 cut(s) 5, 2174, 2181
BspCNI CTCAG 9 cut(s) 271, 1120, 1193, 1456, 1465, 1606, 1804, 1809, 1881
BspDI ATCGAT 1 cut(s) 591
BspFNI CGCG 3 cut(s) 29, 50, 1825
BspLI GGNNCC 5 cut(s) 878, 1553, 2154, 2174, 2175
BspPI GGATC 3 cut(s) 596, 995, 1235
BspT107I GGYRCC 2 cut(s) 1551, 2152
BspTNI GGTCTC 1 cut(s) 2098
BsrBI CCGCTC 1 cut(s) 83
BsrDI GCAATG 1 cut(s) 351
BsrGI TGTACA 1 cut(s) 442
BsrI ACTGG 4 cut(s) 246, 798, 1100, 2182
BssECI CCNNGG 4 cut(s) 27, 1563, 2175, 2176
BssNI GRCGYC 2 cut(s) 33, 2153
BssSI CACGAG 1 cut(s) 963
BssT1I CCWWGG 1 cut(s) 1563
Bst2BI CACGAG 1 cut(s) 963
Bst2UI CCWGG 4 cut(s) 743, 1409, 1737, 1955
Bst6I CTCTTC 2 cut(s) 936, 1308
BstACI GRCGYC 2 cut(s) 33, 2153
BstAPI GCANNNNNTGC 1 cut(s) 277
BstAUI TGTACA 1 cut(s) 442
BstC8I GCNNGC 5 cut(s) 31, 189, 1228, 1608, 2052
BstDSI CCRYGG 2 cut(s) 27, 1563
BstF5I GGATG 4 cut(s) 590, 823, 1457, 2101
BstFNI CGCG 3 cut(s) 29, 50, 1825
BstH2I RGCGCY 1 cut(s) 2156
BstHHI GCGC 2 cut(s) 72, 2155
BstMAI GTCTC 2 cut(s) 1632, 2098
BstMCI CGRYCG 1 cut(s) 595
BstNI CCWGG 4 cut(s) 743, 1409, 1737, 1955
BstNSI RCATGY 5 cut(s) 640, 1230, 1610, 1915, 2042
BstSCI CCNGG 6 cut(s) 741, 1407, 1735, 1953, 2175, 2176
BstSFI CTRYAG 1 cut(s) 765
BstSLI GKGCMC 1 cut(s) 2176
BstUI CGCG 3 cut(s) 29, 50, 1825
BstV1I GCAGC 7 cut(s) 121, 211, 214, 439, 793, 2032, 2035
BstV2I GAAGAC 3 cut(s) 1747, 1766, 1944
BstX2I RGATCY 3 cut(s) 1240, 1483, 2162
BstYI RGATCY 3 cut(s) 1240, 1483, 2162
Bsu15I ATCGAT 1 cut(s) 591
BsuRI GGCC 3 cut(s) 5, 2174, 2181
BsuTUI ATCGAT 1 cut(s) 591
BtgI CCRYGG 2 cut(s) 27, 1563
BtrI CACGTC 1 cut(s) 2143
BtsCI GGATG 4 cut(s) 590, 823, 1457, 2101
BtsI GCAGTG 1 cut(s) 1088
BtsIMutI CAGTG 8 cut(s) 24, 253, 527, 625, 1088, 1093, 1864, 1932
Cac8I GCNNGC 5 cut(s) 31, 189, 1228, 1608, 2052
CaiI CAGNNNCTG 1 cut(s) 1630
CfoI GCGC 2 cut(s) 72, 2155
Cfr13I GGNCC 7 cut(s) 304, 877, 1210, 1663, 2172, 2173, 2179
Cfr42I CCGCGG 1 cut(s) 30
Cfr9I CCCGGG 1 cut(s) 2176
ClaI ATCGAT 1 cut(s) 591
CseI GACGC 2 cut(s) 22, 1831
Csp6I GTAC 4 cut(s) 443, 797, 1614, 1838
CviQI GTAC 4 cut(s) 443, 797, 1614, 1838
DinI GGCGCC 1 cut(s) 2154
DraI TTTAAA 3 cut(s) 1113, 1810, 1830
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 936, 1308
EarI CTCTTC 2 cut(s) 936, 1308
Eco130I CCWWGG 1 cut(s) 1563
Eco24I GRGCYC 1 cut(s) 2176
Eco31I GGTCTC 1 cut(s) 2098
Eco47I GGWCC 4 cut(s) 304, 877, 1210, 1663
Eco57I CTGAAG 3 cut(s) 1029, 1866, 1956
Eco88I CYCGRG 1 cut(s) 2176
EcoO109I RGGNCCY 2 cut(s) 2172, 2173
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 4 cut(s) 741, 1407, 1735, 1953
EcoT14I CCWWGG 1 cut(s) 1563
EcoT22I ATGCAT 2 cut(s) 1228, 1232
EcoT38I GRGCYC 1 cut(s) 2176
EgeI GGCGCC 1 cut(s) 2154
EheI GGCGCC 1 cut(s) 2154
ErhI CCWWGG 1 cut(s) 1563
FaqI GGGAC 1 cut(s) 890
FauI CCCGC 2 cut(s) 22, 34
FbaI TGATCA 3 cut(s) 499, 1192, 2145
FblI GTMKAC 2 cut(s) 1368, 1382
FokI GGATG 4 cut(s) 597, 830, 1444, 2108
FriOI GRGCYC 1 cut(s) 2176
FspBI CTAG 7 cut(s) 614, 1059, 1077, 1214, 1307, 1391, 1691
GlaI GCGC 2 cut(s) 71, 2154
GsaI CCCAGC 2 cut(s) 126, 644
GsuI CTGGAG 1 cut(s) 725
HaeII RGCGCY 1 cut(s) 2156
HaeIII GGCC 3 cut(s) 5, 2174, 2181
HapII CCGG 3 cut(s) 199, 815, 2177
HgaI GACGC 2 cut(s) 22, 1831
HhaI GCGC 2 cut(s) 72, 2155
Hin1I GRCGYC 2 cut(s) 33, 2153
Hin6I GCGC 2 cut(s) 70, 2153
HinP1I GCGC 2 cut(s) 70, 2153
HincII GTYRAC 3 cut(s) 243, 834, 2036
HindII GTYRAC 3 cut(s) 243, 834, 2036
HindIII AAGCTT 1 cut(s) 416
HpaI GTTAAC 1 cut(s) 834
HpaII CCGG 3 cut(s) 199, 815, 2177
HphI GGTGA 3 cut(s) 1247, 1551, 1955
Hpy166II GTNNAC 6 cut(s) 243, 834, 1294, 1369, 1383, 2036
Hpy8I GTNNAC 6 cut(s) 243, 834, 1294, 1369, 1383, 2036
Hpy99I CGWCG 2 cut(s) 11, 121
HpyAV CCTTC 6 cut(s) 196, 1004, 1521, 1851, 2086, 2166
HpyCH4IV ACGT 3 cut(s) 1020, 1315, 2142
HpySE526I ACGT 3 cut(s) 1020, 1315, 2142
Hsp92I GRCGYC 2 cut(s) 33, 2153
HspAI GCGC 2 cut(s) 70, 2153
KasI GGCGCC 1 cut(s) 2152
Ksp22I TGATCA 3 cut(s) 499, 1192, 2145
KspAI GTTAAC 1 cut(s) 834
KspI CCGCGG 1 cut(s) 30
LmnI GCTCC 5 cut(s) 127, 538, 911, 979, 1025
Lsp1109I GCAGC 7 cut(s) 121, 211, 214, 439, 793, 2032, 2035
LweI GCATC 6 cut(s) 271, 394, 424, 1174, 1345, 1427
MaeI CTAG 7 cut(s) 614, 1059, 1077, 1214, 1307, 1391, 1691
MaeII ACGT 3 cut(s) 1020, 1315, 2142
MaeIII GTNAC 5 cut(s) 487, 1497, 1686, 1943, 2184
MbiI CCGCTC 1 cut(s) 83
MflI RGATCY 3 cut(s) 1240, 1483, 2162
MhlI GDGCHC 1 cut(s) 2176
MluI ACGCGT 1 cut(s) 1823
Mly113I GGCGCC 1 cut(s) 2153
MlyI GAGTC 1 cut(s) 1409
MmeI TCCRAC 2 cut(s) 562, 1003
Mph1103I ATGCAT 2 cut(s) 1228, 1232
MroXI GAANNNNTTC 1 cut(s) 522
MspA1I CMGCKG 4 cut(s) 29, 425, 1007, 1669
MspI CCGG 3 cut(s) 199, 815, 2177
MspR9I CCNGG 6 cut(s) 743, 1409, 1737, 1955, 2177, 2178
Mva1269I GAATGC 1 cut(s) 82
MvaI CCWGG 4 cut(s) 743, 1409, 1737, 1955
MvnI CGCG 3 cut(s) 29, 50, 1825
NarI GGCGCC 1 cut(s) 2153
NciI CCSGG 2 cut(s) 2177, 2178
NcoI CCATGG 1 cut(s) 1563
NlaIV GGNNCC 5 cut(s) 878, 1553, 2154, 2174, 2175
NmuCI GTSAC 2 cut(s) 1497, 1943
NsiI ATGCAT 2 cut(s) 1228, 1232
NspI RCATGY 5 cut(s) 640, 1230, 1610, 1915, 2042
PaeI GCATGC 2 cut(s) 1230, 1610
PctI GAATGC 1 cut(s) 82
PdmI GAANNNNTTC 1 cut(s) 522
PfoI TCCNGGA 1 cut(s) 741
Ple19I CGATCG 1 cut(s) 595
PleI GAGTC 1 cut(s) 1408
PluTI GGCGCC 1 cut(s) 2156
PpsI GAGTC 1 cut(s) 1408
PshBI ATTAAT 1 cut(s) 1647
PsiI TTATAA 2 cut(s) 1574, 2194
Psp6I CCWGG 4 cut(s) 741, 1407, 1735, 1953
PspFI CCCAGC 2 cut(s) 122, 640
PspGI CCWGG 4 cut(s) 741, 1407, 1735, 1953
PspN4I GGNNCC 5 cut(s) 878, 1553, 2154, 2174, 2175
PspOMI GGGCCC 1 cut(s) 2172
PspPI GGNCC 7 cut(s) 304, 877, 1210, 1663, 2172, 2173, 2179
PstNI CAGNNNCTG 1 cut(s) 1630
PsuI RGATCY 3 cut(s) 1240, 1483, 2162
PvuI CGATCG 1 cut(s) 595
PvuII CAGCTG 2 cut(s) 1007, 1669
RsaI GTAC 4 cut(s) 444, 798, 1615, 1839
RsaNI GTAC 4 cut(s) 443, 797, 1614, 1838
SacII CCGCGG 1 cut(s) 30
Sau96I GGNCC 7 cut(s) 304, 877, 1210, 1663, 2172, 2173, 2179
SchI GAGTC 1 cut(s) 1409
ScrFI CCNGG 6 cut(s) 743, 1409, 1737, 1955, 2177, 2178
SduI GDGCHC 1 cut(s) 2176
SfaNI GCATC 6 cut(s) 271, 394, 424, 1174, 1345, 1427
SfcI CTRYAG 1 cut(s) 765
SfoI GGCGCC 1 cut(s) 2154
Sfr303I CCGCGG 1 cut(s) 30
SgrBI CCGCGG 1 cut(s) 30
SinI GGWCC 4 cut(s) 304, 877, 1210, 1663
SmaI CCCGGG 1 cut(s) 2178
SmlI CTYRAG 2 cut(s) 86, 266
SmoI CTYRAG 2 cut(s) 86, 266
SphI GCATGC 2 cut(s) 1230, 1610
SspDI GGCGCC 1 cut(s) 2152
SspMI CTAG 7 cut(s) 614, 1059, 1077, 1214, 1307, 1391, 1691
StyD4I CCNGG 6 cut(s) 741, 1407, 1735, 1953, 2175, 2176
StyI CCWWGG 1 cut(s) 1563
TaiI ACGT 3 cut(s) 1023, 1318, 2145
TaqI TCGA 4 cut(s) 591, 1083, 1480, 1854
TatI WGTACW 1 cut(s) 442
TauI GCSGC 6 cut(s) 83, 149, 187, 257, 600, 1805
TscAI CASTG 8 cut(s) 24, 253, 534, 625, 1095, 1100, 1864, 1939
TseFI GTSAC 2 cut(s) 1497, 1943
TseI GCWGC 7 cut(s) 109, 224, 227, 452, 806, 2020, 2023
Tsp45I GTSAC 2 cut(s) 1497, 1943
TspDTI ATGAA 9 cut(s) 367, 560, 834, 870, 1211, 1277, 1536, 1833, 2124
TspGWI ACGGA 2 cut(s) 182, 557
TspMI CCCGGG 1 cut(s) 2176
TspRI CASTG 8 cut(s) 24, 253, 534, 625, 1095, 1100, 1864, 1939
VpaK11BI GGWCC 4 cut(s) 304, 877, 1210, 1663
VspI ATTAAT 1 cut(s) 1647
XapI RAATTY 5 cut(s) 170, 518, 821, 857, 1812
XbaI TCTAGA 1 cut(s) 1306
XceI RCATGY 5 cut(s) 640, 1230, 1610, 1915, 2042
XmaI CCCGGG 1 cut(s) 2176
XmiI GTMKAC 2 cut(s) 1368, 1382
XmnI GAANNNNTTC 1 cut(s) 522
XspI CTAG 7 cut(s) 614, 1059, 1077, 1214, 1307, 1391, 1691
Zsp2I ATGCAT 2 cut(s) 1228, 1232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.