pycom13g06180

SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0015044
Physical Location & Seq
Forward (+)
4031619 .. 4033247
1629 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g06180.1

Sequence Viewer

Length: 1629 bp
ATGAGAGAAGAAGCTCAACAGCAGGATCAACTGGCAATGGCGACAGCAGAAGAGCAACTGCAGCAGCTCCGGTCCAAAGCCACGGAGCTCCTCCTCCGAGAAGAATGGCAGGAGTCCGTACAAGCATACTCTCACTTCATCACCCTCTGCCAATCCCACATCTCAAATTTCCCTCAAAACCCCGACCCCGATCATCTGCCCAAGCTCCGAAAATCCCTCTGCCTTGCCCTCTCCAACCGGGCCGAAGCGCGATCCAGGCTCCGAGATTTCGCTGAAGCATTGAGGGATTGCGATCGGGCATTGGAAATCGAGAGGGCCCATTTCAAGACTCTTGTCTGCAAAGGCAAGATCTTGCTGAATCTGAACAGGTATTCCATGGCGCTGGACTACTTTCGAACAGCTCAGCTCGACCCGCAGGCTAACGGGAGCTCTGTGGACCTCGATGGGTACTTGCAGAAGTCCAAGAAGCTCGAGCTGATGTCGAGAACTGGAGCCTTTGATCTCTCTGAATGGGTTGTTAACGGGTTTCGTGGGAAGCCTCTGGAACCGGCTGAGTACATTGGTGCAGTGCAGATCAAGAAATCGGAGATTAGAGGGCGTGGACTGTTTGTGACGAAGAACATTGACGCCGGAACTTTGGTGCTGGTCACGAAAGCGGTTGCTACAGAGAGAGGAATTTTTCCTGGTCAAGATTTGGATGAGAATACACAATTGGTCATGTGGAAGAACTTCACTGAAAAAGTGATGCATTCCGTGGCTAAATGTTCGAGAATCCGCAATTTGATTAGTACATTGTCGAGTGGGGAAGATGAGGATGAGCTTGAGGTCCCTGAGATCAATCGCTTTAAGCCCGAGGCGGAGCACAATGGCGGCTACCATAATGAGAATGAGCATGATGCGAGCAGGATGTTGAGCATATTGGATGTCAATTCACTGGTTGAGGATGCAATTTCTTCCAAGGTTTTGGGGAAGAACAACGATTACTACGGTGTTGGGCTGTGGGTGCTGGCTTCATTCATCAACCATTCATGTGTTCCGAATGCAAGACGTATGCATATAGGAGATTATGTAATGGTTCATGCTTCTAGAGATGTCAAGGCCGGGGAGGAGATAACATTTGCATATTTTGATGTGCTTTCATCGTTGGAAAAGCGCAACGAAGGTAGCAAGACATGGGGTTTTAGATGTAACTGCAAGAGGTGCAAGTTTGAGGAGAAACTGTATTCTAGAGAAGACTTGAGAGAGATTGAGATGGGTCTCGAAAGAGGGATGGATGCCGGCGCAGCAGTTTACAAGCTGGAGGAAGGCATGAGGAGGTGGATGGTGAAGGAAAGGGAGAAAGGGTACTTGAGAGCATCGTTTTGGGAAGCATGCTCTCAGGCTTATGACTCAGAGAAGTCGGCAAAGGGGTGGGCAAGACGCATACCGCCAATGGAGACGGTGGTTGATAGCGTTGTGGAAGCGGTGGGAAGTGACGAGAGGGTGCTGAAGATGGTGGCGGAGAAGTTGAAGAGACGTGGTGGAGGAATGGTGGAAATGGAGAGAGCTATGAAGTTGGGAAGAGGGGTGTATGGGAAAGTAGTGAAAAAGCAAGCAATGAAGACTCTTCTTGGTTTAGGCATTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SET

Protein Analysis

543

Amino Acids

61.54

Weight (kDa)

7.56

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SET PF00856 199 - 375 6.4e-14 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26760
fragaria_vesca FvH4_4g31050
malus_domestica MD13G1069000.v1.1
prunus_persica Prupe.1G278000_v2.0.a1
pyrus_communis pycom13g06180 pycom16g06040
rosa_chinensis RchiOBHm_Chr4g0439431
rosa_laevigata RLG00000006273
rosa_multiflora Rmu_sc0007276.1_g000002
rosa_roxburghii Rroxscaffold_5G00380340
rosa_rugosa Rorug04G0318100
rosa_samantha Rh4AG369400 Rh4BG381200 Rh4CG395800 Rh4DG375900
rosa_wichuraiana Rw4G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 250
AciI CCGC 8 cut(s) 413, 656, 775, 857, 870, 1427, 1463, 1499
AclWI GGATC 2 cut(s) 33, 246
AcsI RAATTY 2 cut(s) 166, 675
AcuI CTGAAG 2 cut(s) 294, 1508
AcyI GRCGYC 1 cut(s) 627
AfaI GTAC 5 cut(s) 120, 449, 557, 790, 1346
AgsI TTSAA 2 cut(s) 325, 1510
AjiI CACGTC 1 cut(s) 1517
AjnI CCWGG 2 cut(s) 254, 682
AjuI GAANNNNNNNTTGG 2 cut(s) 695, 727
AloI GAACNNNNNNTCC 2 cut(s) 356, 388
Alw21I GWGCWC 3 cut(s) 90, 431, 864
Alw26I GTCTC 3 cut(s) 1262, 1430, 1507
AlwI GGATC 2 cut(s) 33, 246
Ama87I CYCGRG 2 cut(s) 470, 851
AoxI GGCC 3 cut(s) 240, 315, 1098
ApaI GGGCCC 1 cut(s) 319
ApeKI GCWGC 3 cut(s) 61, 64, 1283
ApoI RAATTY 2 cut(s) 166, 675
Asp700I GAANNNNTTC 1 cut(s) 728
AspLEI GCGC 4 cut(s) 250, 382, 1155, 1283
AspS9I GGNCC 6 cut(s) 72, 240, 315, 316, 436, 826
AsuC2I CCSGG 2 cut(s) 239, 1102
AsuHPI GGTGA 2 cut(s) 133, 1336
AsuII TTCGAA 1 cut(s) 394
AvaI CYCGRG 2 cut(s) 470, 851
AvaII GGWCC 3 cut(s) 72, 436, 826
BaeGI GKGCMC 1 cut(s) 319
BanII GRGCYC 3 cut(s) 90, 319, 431
BbsI GAAGAC 2 cut(s) 1239, 1607
Bbv12I GWGCWC 3 cut(s) 90, 431, 864
BbvI GCAGC 3 cut(s) 73, 76, 1295
BccI CCATC 5 cut(s) 437, 1246, 1264, 1315, 1486
BciT130I CCWGG 2 cut(s) 256, 684
BcnI CCSGG 2 cut(s) 239, 1102
BcoDI GTCTC 3 cut(s) 1262, 1430, 1507
BfaI CTAG 2 cut(s) 1086, 1227
BfmI CTRYAG 2 cut(s) 59, 663
BfoI RGCGCY 1 cut(s) 383
BglII AGATCT 1 cut(s) 348
BisI GCNGC 4 cut(s) 62, 65, 871, 1284
BlpI GCTNAGC 1 cut(s) 402
BlsI GCNGC 4 cut(s) 63, 66, 872, 1285
Bme1390I CCNGG 4 cut(s) 239, 256, 684, 1102
Bme18I GGWCC 3 cut(s) 72, 436, 826
BmeT110I CYCGRG 2 cut(s) 470, 851
BmgBI CACGTC 1 cut(s) 1517
BmgT120I GGNCC 6 cut(s) 72, 240, 315, 316, 436, 826
BmiI GGNNCC 5 cut(s) 260, 317, 493, 546, 828
BmrFI CCNGG 4 cut(s) 239, 256, 684, 1102
BmsI GCATC 5 cut(s) 735, 886, 934, 1264, 1364
BoxI GACNNNNGTC 1 cut(s) 332
BpiI GAAGAC 2 cut(s) 1239, 1607
BpmI CTGGAG 2 cut(s) 510, 1319
Bpu1102I GCTNAGC 1 cut(s) 402
Bpu14I TTCGAA 1 cut(s) 394
BpuEI CTTGAG 3 cut(s) 842, 1258, 1369
BpuMI CCSGG 2 cut(s) 239, 1102
BsaBI GATNNNNATC 1 cut(s) 291
BsaHI GRCGYC 1 cut(s) 627
BsaI GGTCTC 1 cut(s) 1262
BsaJI CCNNGG 6 cut(s) 81, 375, 753, 852, 957, 1101
BsaWI WCCGGW 1 cut(s) 69
BsaXI ACNNNNNCTCC 8 cut(s) 1053, 1083, 1205, 1235, 1328, 1358, 1515, 1545
Bse118I RCCGGY 2 cut(s) 547, 1277
Bse1I ACTGG 3 cut(s) 36, 493, 939
Bse3DI GCAATG 2 cut(s) 42, 1602
Bse8I GATNNNNATC 1 cut(s) 291
BseBI CCWGG 2 cut(s) 256, 684
BseDI CCNNGG 6 cut(s) 81, 375, 753, 852, 957, 1101
BseGI GGATG 8 cut(s) 703, 820, 912, 928, 949, 1275, 1279, 1326
BseJI GATNNNNATC 1 cut(s) 291
BseMI GCAATG 2 cut(s) 42, 1602
BseMII CTCAG 5 cut(s) 416, 543, 822, 1391, 1404
BseNI ACTGG 3 cut(s) 36, 493, 939
BseRI GAGGAG 5 cut(s) 80, 83, 1121, 1226, 1327
BseSI GKGCMC 1 cut(s) 319
BseXI GCAGC 3 cut(s) 73, 76, 1295
BsgI GTGCAG 2 cut(s) 585, 590
Bsh1236I CGCG 1 cut(s) 250
Bsh1285I CGRYCG 1 cut(s) 295
BshFI GGCC 3 cut(s) 242, 317, 1100
BsiEI CGRYCG 1 cut(s) 295
BsiHKAI GWGCWC 3 cut(s) 90, 431, 864
BsiHKCI CYCGRG 2 cut(s) 470, 851
BsiSI CCGG 6 cut(s) 70, 238, 548, 630, 1101, 1278
BslFI GGGAC 1 cut(s) 812
BsmAI GTCTC 3 cut(s) 1262, 1430, 1507
BsmBI CGTCTC 2 cut(s) 1430, 1507
BsmFI GGGAC 1 cut(s) 812
BsmI GAATGC 3 cut(s) 748, 1045, 1620
BsnI GGCC 3 cut(s) 242, 317, 1100
Bso31I GGTCTC 1 cut(s) 1262
BsoBI CYCGRG 2 cut(s) 470, 851
Bsp119I TTCGAA 1 cut(s) 394
Bsp120I GGGCCC 1 cut(s) 315
Bsp1286I GDGCHC 4 cut(s) 90, 319, 431, 864
Bsp143I GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
Bsp1720I GCTNAGC 1 cut(s) 402
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 8 cut(s) 413, 656, 775, 857, 870, 1427, 1463, 1499
BspANI GGCC 3 cut(s) 242, 317, 1100
BspCNI CTCAG 5 cut(s) 415, 544, 823, 1390, 1403
BspFNI CGCG 1 cut(s) 250
BspLI GGNNCC 5 cut(s) 260, 317, 493, 546, 828
BspMAI CTGCAG 1 cut(s) 63
BspPI GGATC 2 cut(s) 33, 246
BspQI GCTCTTC 1 cut(s) 45
BspT104I TTCGAA 1 cut(s) 394
BspTNI GGTCTC 1 cut(s) 1262
BsrDI GCAATG 2 cut(s) 42, 1602
BsrFI RCCGGY 2 cut(s) 547, 1277
BsrI ACTGG 3 cut(s) 36, 493, 939
BssAI RCCGGY 2 cut(s) 547, 1277
BssECI CCNNGG 6 cut(s) 81, 375, 753, 852, 957, 1101
BssMI GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
BssNI GRCGYC 1 cut(s) 627
BssT1I CCWWGG 2 cut(s) 375, 957
Bst2UI CCWGG 2 cut(s) 256, 684
Bst4CI ACNGT 4 cut(s) 606, 989, 1221, 1441
Bst6I CTCTTC 4 cut(s) 45, 1505, 1555, 1611
BstACI GRCGYC 1 cut(s) 627
BstAPI GCANNNNNTGC 1 cut(s) 1200
BstBI TTCGAA 1 cut(s) 394
BstC8I GCNNGC 6 cut(s) 417, 901, 1008, 1279, 1372, 1593
BstDEI CTNAG 5 cut(s) 402, 552, 831, 1377, 1390
BstDSI CCRYGG 3 cut(s) 81, 375, 753
BstF5I GGATG 8 cut(s) 703, 820, 912, 928, 949, 1275, 1279, 1326
BstFNI CGCG 1 cut(s) 250
BstH2I RGCGCY 1 cut(s) 383
BstHHI GCGC 4 cut(s) 250, 382, 1155, 1283
BstKTI GATC 8 cut(s) 28, 193, 254, 295, 351, 502, 576, 837
BstMAI GTCTC 3 cut(s) 1262, 1430, 1507
BstMBI GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
BstMCI CGRYCG 1 cut(s) 295
BstMWI GCNNNNNNNGC 6 cut(s) 61, 256, 412, 1003, 1200, 1283
BstNI CCWGG 2 cut(s) 256, 684
BstNSI RCATGY 1 cut(s) 1374
BstPAI GACNNNNGTC 1 cut(s) 332
BstSCI CCNGG 4 cut(s) 237, 254, 682, 1100
BstSFI CTRYAG 2 cut(s) 59, 663
BstSLI GKGCMC 1 cut(s) 319
BstUI CGCG 1 cut(s) 250
BstV1I GCAGC 3 cut(s) 73, 76, 1295
BstV2I GAAGAC 2 cut(s) 1239, 1607
BstX2I RGATCY 1 cut(s) 348
BstXI CCANNNNNNTGG 2 cut(s) 382, 964
BstYI RGATCY 1 cut(s) 348
BsuRI GGCC 3 cut(s) 242, 317, 1100
BtgI CCRYGG 3 cut(s) 81, 375, 753
BtrI CACGTC 1 cut(s) 1517
BtsCI GGATG 8 cut(s) 703, 820, 912, 928, 949, 1275, 1279, 1326
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 3 cut(s) 573, 732, 932
Cac8I GCNNGC 6 cut(s) 417, 901, 1008, 1279, 1372, 1593
CfoI GCGC 4 cut(s) 250, 382, 1155, 1283
Cfr10I RCCGGY 2 cut(s) 547, 1277
Cfr13I GGNCC 6 cut(s) 72, 240, 315, 316, 436, 826
CseI GACGC 2 cut(s) 635, 1428
Csp6I GTAC 5 cut(s) 119, 448, 556, 789, 1345
CviAII CATG 8 cut(s) 376, 718, 893, 1029, 1079, 1173, 1309, 1371
CviQI GTAC 5 cut(s) 119, 448, 556, 789, 1345
DdeI CTNAG 5 cut(s) 402, 552, 831, 1377, 1390
DpnI GATC 8 cut(s) 27, 192, 253, 294, 350, 501, 575, 836
DpnII GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
Eam1104I CTCTTC 4 cut(s) 45, 1505, 1555, 1611
EarI CTCTTC 4 cut(s) 45, 1505, 1555, 1611
EciI GGCGGA 2 cut(s) 872, 1514
Ecl136II GAGCTC 2 cut(s) 88, 429
Eco130I CCWWGG 2 cut(s) 375, 957
Eco24I GRGCYC 3 cut(s) 90, 319, 431
Eco31I GGTCTC 1 cut(s) 1262
Eco47I GGWCC 3 cut(s) 72, 436, 826
Eco53kI GAGCTC 2 cut(s) 88, 429
Eco57I CTGAAG 2 cut(s) 294, 1508
Eco88I CYCGRG 2 cut(s) 470, 851
EcoICRI GAGCTC 2 cut(s) 88, 429
EcoO109I RGGNCCY 2 cut(s) 315, 826
EcoRII CCWGG 2 cut(s) 254, 682
EcoT14I CCWWGG 2 cut(s) 375, 957
EcoT22I ATGCAT 2 cut(s) 750, 1056
EcoT38I GRGCYC 3 cut(s) 90, 319, 431
ErhI CCWWGG 2 cut(s) 375, 957
Esp3I CGTCTC 2 cut(s) 1430, 1507
FaeI CATG 8 cut(s) 379, 721, 896, 1032, 1082, 1176, 1312, 1374
FaqI GGGAC 1 cut(s) 812
FatI CATG 8 cut(s) 375, 717, 892, 1028, 1078, 1172, 1308, 1370
FauI CCCGC 1 cut(s) 420
Fnu4HI GCNGC 4 cut(s) 62, 65, 871, 1284
FokI GGATG 8 cut(s) 710, 827, 919, 935, 956, 1282, 1286, 1333
FriOI GRGCYC 3 cut(s) 90, 319, 431
Fsp4HI GCNGC 4 cut(s) 62, 65, 871, 1284
FspBI CTAG 2 cut(s) 1086, 1227
GlaI GCGC 4 cut(s) 249, 381, 1154, 1282
GluI GCNGC 4 cut(s) 62, 65, 871, 1284
GsuI CTGGAG 2 cut(s) 510, 1319
HaeII RGCGCY 1 cut(s) 383
HaeIII GGCC 3 cut(s) 242, 317, 1100
HapII CCGG 6 cut(s) 70, 238, 548, 630, 1101, 1278
HgaI GACGC 2 cut(s) 635, 1428
HhaI GCGC 4 cut(s) 250, 382, 1155, 1283
Hin1I GRCGYC 1 cut(s) 627
Hin1II CATG 8 cut(s) 379, 721, 896, 1032, 1082, 1176, 1312, 1374
Hin6I GCGC 4 cut(s) 248, 380, 1153, 1281
HinP1I GCGC 4 cut(s) 248, 380, 1153, 1281
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HinfI GANTC 6 cut(s) 113, 328, 358, 771, 1388, 1603
HpaI GTTAAC 1 cut(s) 520
HpaII CCGG 6 cut(s) 70, 238, 548, 630, 1101, 1278
HphI GGTGA 2 cut(s) 133, 1336
Hpy166II GTNNAC 4 cut(s) 436, 520, 602, 1291
Hpy188I TCNGA 8 cut(s) 98, 209, 263, 363, 508, 586, 1038, 1393
Hpy8I GTNNAC 4 cut(s) 436, 520, 602, 1291
HpyAV CCTTC 3 cut(s) 1154, 1298, 1321
HpyCH4III ACNGT 4 cut(s) 606, 989, 1221, 1441
HpyCH4IV ACGT 2 cut(s) 1048, 1516
HpyF10VI GCNNNNNNNGC 6 cut(s) 61, 256, 412, 1003, 1200, 1283
HpyF3I CTNAG 5 cut(s) 402, 552, 831, 1377, 1390
HpySE526I ACGT 2 cut(s) 1048, 1516
Hsp92I GRCGYC 1 cut(s) 627
Hsp92II CATG 8 cut(s) 379, 721, 896, 1032, 1082, 1176, 1312, 1374
HspAI GCGC 4 cut(s) 248, 380, 1153, 1281
KroI GCCGGC 1 cut(s) 1277
KroNI GCCGGC 1 cut(s) 1279
KspAI GTTAAC 1 cut(s) 520
Kzo9I GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 8 cut(s) 72, 85, 93, 210, 264, 426, 491, 859
Lsp1109I GCAGC 3 cut(s) 73, 76, 1295
LweI GCATC 5 cut(s) 735, 886, 934, 1264, 1364
MaeI CTAG 2 cut(s) 1086, 1227
MaeII ACGT 2 cut(s) 1048, 1516
MaeIII GTNAC 4 cut(s) 610, 646, 1187, 1472
MalI GATC 8 cut(s) 27, 192, 253, 294, 350, 501, 575, 836
MboI GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
MfeI CAATTG 1 cut(s) 710
MflI RGATCY 1 cut(s) 348
MhlI GDGCHC 4 cut(s) 90, 319, 431, 864
MluCI AATT 6 cut(s) 166, 675, 710, 778, 928, 948
MlyI GAGTC 4 cut(s) 122, 322, 1382, 1597
MmeI TCCRAC 2 cut(s) 258, 1125
Mph1103I ATGCAT 2 cut(s) 750, 1056
MroNI GCCGGC 1 cut(s) 1277
MroXI GAANNNNTTC 1 cut(s) 728
MseI TTAA 3 cut(s) 519, 846, 1627
MslI CAYNNNNRTG 1 cut(s) 1029
MspI CCGG 6 cut(s) 70, 238, 548, 630, 1101, 1278
MspR9I CCNGG 4 cut(s) 239, 256, 684, 1102
MunI CAATTG 1 cut(s) 710
Mva1269I GAATGC 3 cut(s) 748, 1045, 1620
MvaI CCWGG 2 cut(s) 256, 684
MvnI CGCG 1 cut(s) 250
MwoI GCNNNNNNNGC 6 cut(s) 61, 256, 412, 1003, 1200, 1283
NaeI GCCGGC 1 cut(s) 1279
NciI CCSGG 2 cut(s) 239, 1102
NcoI CCATGG 1 cut(s) 375
NdeII GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
NgoMIV GCCGGC 1 cut(s) 1277
NlaIII CATG 8 cut(s) 379, 721, 896, 1032, 1082, 1176, 1312, 1374
NlaIV GGNNCC 5 cut(s) 260, 317, 493, 546, 828
NmuCI GTSAC 3 cut(s) 610, 646, 1472
NsiI ATGCAT 2 cut(s) 750, 1056
NspI RCATGY 1 cut(s) 1374
NspV TTCGAA 1 cut(s) 394
PaeI GCATGC 1 cut(s) 1374
PaeR7I CTCGAG 1 cut(s) 470
PciSI GCTCTTC 1 cut(s) 45
PctI GAATGC 3 cut(s) 748, 1045, 1620
PdiI GCCGGC 1 cut(s) 1279
PdmI GAANNNNTTC 1 cut(s) 728
PfeI GAWTC 2 cut(s) 358, 771
PkrI GCNGC 4 cut(s) 63, 66, 872, 1285
Ple19I CGATCG 1 cut(s) 295
PleI GAGTC 4 cut(s) 121, 322, 1382, 1597
PpsI GAGTC 4 cut(s) 121, 322, 1382, 1597
PpuMI RGGWCCY 1 cut(s) 826
PshAI GACNNNNGTC 1 cut(s) 332
Psp124BI GAGCTC 2 cut(s) 90, 431
Psp5II RGGWCCY 1 cut(s) 826
Psp6I CCWGG 2 cut(s) 254, 682
PspGI CCWGG 2 cut(s) 254, 682
PspN4I GGNNCC 5 cut(s) 260, 317, 493, 546, 828
PspOMI GGGCCC 1 cut(s) 315
PspPI GGNCC 6 cut(s) 72, 240, 315, 316, 436, 826
PspPPI RGGWCCY 1 cut(s) 826
PspXI VCTCGAGB 1 cut(s) 470
PsrI GAACNNNNNNTAC 2 cut(s) 965, 997
PstI CTGCAG 1 cut(s) 63
PsuI RGATCY 1 cut(s) 348
PvuI CGATCG 1 cut(s) 295
RsaI GTAC 5 cut(s) 120, 449, 557, 790, 1346
RsaNI GTAC 5 cut(s) 119, 448, 556, 789, 1345
RseI CAYNNNNRTG 1 cut(s) 1029
SacI GAGCTC 2 cut(s) 90, 431
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 3 cut(s) 519, 846, 1627
SatI GCNGC 4 cut(s) 62, 65, 871, 1284
Sau3AI GATC 8 cut(s) 25, 190, 251, 292, 348, 499, 573, 834
Sau96I GGNCC 6 cut(s) 72, 240, 315, 316, 436, 826
SchI GAGTC 4 cut(s) 122, 322, 1382, 1597
ScrFI CCNGG 4 cut(s) 239, 256, 684, 1102
SduI GDGCHC 4 cut(s) 90, 319, 431, 864
SfaNI GCATC 5 cut(s) 735, 886, 934, 1264, 1364
SfcI CTRYAG 2 cut(s) 59, 663
Sfr274I CTCGAG 1 cut(s) 470
SfuI TTCGAA 1 cut(s) 394
SinI GGWCC 3 cut(s) 72, 436, 826
SlaI CTCGAG 1 cut(s) 470
SmiMI CAYNNNNRTG 1 cut(s) 1029
SmlI CTYRAG 4 cut(s) 470, 821, 1237, 1348
SmoI CTYRAG 4 cut(s) 470, 821, 1237, 1348
SphI GCATGC 1 cut(s) 1374
Sse9I AATT 6 cut(s) 166, 675, 710, 778, 928, 948
SsiI CCGC 8 cut(s) 413, 656, 775, 857, 870, 1427, 1463, 1499
SspMI CTAG 2 cut(s) 1086, 1227
SstI GAGCTC 2 cut(s) 90, 431
StyD4I CCNGG 4 cut(s) 237, 254, 682, 1100
StyI CCWWGG 2 cut(s) 375, 957
TaaI ACNGT 4 cut(s) 606, 989, 1221, 1441
TaiI ACGT 2 cut(s) 1051, 1519
TaqI TCGA 9 cut(s) 309, 394, 408, 441, 471, 482, 767, 797, 1260
TasI AATT 6 cut(s) 166, 675, 710, 778, 928, 948
TatI WGTACW 2 cut(s) 555, 788
TauI GCSGC 1 cut(s) 873
TfiI GAWTC 2 cut(s) 358, 771
Tru1I TTAA 3 cut(s) 519, 846, 1627
Tru9I TTAA 3 cut(s) 519, 846, 1627
TscAI CASTG 3 cut(s) 573, 739, 939
TseFI GTSAC 3 cut(s) 610, 646, 1472
TseI GCWGC 3 cut(s) 61, 64, 1283
Tsp45I GTSAC 3 cut(s) 610, 646, 1472
TspDTI ATGAA 8 cut(s) 127, 1002, 1006, 1017, 1067, 1128, 1565, 1613
TspGWI ACGGA 3 cut(s) 98, 106, 742
TspRI CASTG 3 cut(s) 573, 739, 939
VpaK11BI GGWCC 3 cut(s) 72, 436, 826
XapI RAATTY 2 cut(s) 166, 675
XbaI TCTAGA 2 cut(s) 1085, 1226
XceI RCATGY 1 cut(s) 1374
XhoI CTCGAG 1 cut(s) 470
XmnI GAANNNNTTC 1 cut(s) 728
XspI CTAG 2 cut(s) 1086, 1227
Zsp2I ATGCAT 2 cut(s) 750, 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.