Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004424

Physical Location & Seq

Genomic Coordinates Forward (+)

7899149 .. 7901383

Gene Structure 2235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g11480.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGCAACTGGAGAAATCAAGTCCCCTGAAGGAGGGACAATGACACCAGTTAGTTTAGATGGAAATCCAGACTCAGAGGAGAGAAAGAAACTTGGGCTTTACTTCATCGAATCCGATGACAGGCGGACGGCTTTTGGACGGGGTTATACTGGAGGAACCACACCGGTTGACATCCATGGAAAACCTATTGCTGATCTTTCGAAAACCGGCGGTTGGTTTGCTGCCTTCTTCATATTCGGAAATGAAATGGCGGAGAGAATGGCGTATTTCGGTCTCTCGATTAACATGGTGGCCTTCATGTTTTATGTTATGCATAGACCCTTCAGCAGTTCATCAAGTGCAGTTAACAATTTTCTGGGGATTTCGCAAGCTTCCTCTGTCCTTGGCGGTTTTCTGGCTGATGCGTATCTTGGTCGATATTGGACAATAGCAATCTTCACAACTATCTATCTTCTGGGTTTGACAGGAATAACCTTATGTGCAACGGTGCACACTTTGGTGCCAAACCAAGATCAATGCTCCGAGCTAGCCCTCCTTGTGGGCAATTGTGAGCCTGCAAAACCGTGGCAGATGATTTACCTCTATGCGGTTCTGTACGTAACTGGATTCGGAGCTGCTGGCATAAGGCCATGCGTTTCTTCTTTCGGGGCTGACCAGTTCGACGAAAGAAGTAGCGATTACAAGTCTCACCTGGATAGGTTTTTCAACTTCTTTTATCTCTCTGTCACCATCGGATCGATCATCGCCTTCACTGCAGTAGTCTACGTCCAAATGAAACTTGGTTGGGGATTCGCGTTCGGGTCACTGGCATTGGCTATGGGCATATCAAACATGGTCTTCTTTCTCGGTACCCCTCTATACCGCCATAGACTTCCCGGAGGGAGCCCTCTAACGCGTGTTGCTCAAGTTTTGGTTGCTGCCTACAAGAAGAGGAAAGCCAAATTTTCCAGAAGTGAGTTGATAGGCTTGTATGAGGTTCCTGGAAAACAATCTGCTGTGAAGGGTAGTGGAAAGATAGCTCACACCGACGACTTTAGATGTTTGGACAAAGCAGCTCTGCAGTTAAAGGAAGAAAGCGCAGACCCTGGTCCCTGGAGGCTATGCACTGTGACACAAGTAGAGGAAGTGAAGATCTTGTTGAAACTTATTCCAATCCCGGCGTGCACAATAATGCTCAGTGTACTTTTGACAGAATATCTCACTCTCTCAGTGCAGCAGGCATACACTTTAAACACCCATATGGGTAAACTGAAACTCCCTGTAACATGCATGCCAGTGTTTCCTGGCCTCAGTATCTTTCTCATACTGTCCCTCTACTACTCTACATTTGTCCCACTGTCCAGGCGCATCACCGGCCATCCCCACGGTGCTTCTCAACTTCAGAGAGTGGGGATAGGCCTGGCCGTTTCAATCCTATCTGTGGCGTGGGCGGCAATTTTCGAAAGGTACCGAAGGAATTATGCGATACGGCAGGGATACGAGGCTAGTTTCTTAAGTGCAATGCCCAACCTAAGTGCATACTGGTTGTTGATCCAGTACTGCCTCATTGGGATAGCTGAGGTGTTTTGCGTGGTGGGATTACTAGAATTTCTGTACGAAGAAGCTCCAGATGCAATGAAGAGTATTGGATCTGCTTACGCTGCTCTTGCCGGCGGTTTAGGTTGCTTTGCAGCCAGTATATTGAACAGCATCATCAAAAATATCACCGGAAGCTCAGAGAAGCCGTCTTGGCTGTCCCAGAATATCAACACAGGAAGATTTGATTATTTCTACTGGGTGCTGACTGTCTTGAGCGTGATCAATTTCGGCGTTTTTCTGTACTGCGCACATCGGTACGAGTACAGGACGGAGCAGGTGGTCCAGATGGAGGAGGAGGCTCTACCCAACATAAAGGAACAACCCCTCAGTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

638

Amino Acids

70.22

Weight (kDa)

8.3

Isoelectric Point (pI)

36.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13400
fragaria_vesca	FvH4_4g22520 FvH4_4g22520 FvH4_4g22520 FvH4_4g22520 FvH4_4g22520 FvH4_4g22520 FvH4_4g22520 FvH4_4g22520 FvH4_4g22520
malus_domestica	MD13G1131800.v1.1 MD16G1142100.v1.1
prunus_persica	Prupe.1G213600_v2.0.a1 Prupe.1G213600_v2.0.a1 Prupe.1G213600_v2.0.a1 Prupe.1G213600_v2.0.a1
pyrus_communis	pycom13g11480 pycom16g11260
rosa_chinensis	RchiOBHm_Chr4g0428751
rosa_laevigata	RLG00000007129
rosa_multiflora	Rmu_co8494165.1_g000001 Rmu_sc0010032.1_g000002
rosa_roxburghii	Rroxscaffold_5G00370410
rosa_rugosa	Rorug04G0228000 Rorug04G0228100 Rorug04G0228100 Rorug04G0228200 Rorug04G0228300
rosa_samantha	Rh4AG285400 Rh4BG291400 Rh4DG288500
rosa_wichuraiana	Rw4G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1843
Acc16I	TGCGCA	1 cut(s)	1825
Acc36I	ACCTGC	1 cut(s)	1843
Acc65I	GGTACC	2 cut(s)	848, 1446
AccB1I	GGYRCC	3 cut(s)	499, 848, 1446
AccI	GTMKAC	1 cut(s)	762
AccII	CGCG	2 cut(s)	794, 895
AciI	CCGC	8 cut(s)	124, 210, 251, 387, 587, 862, 1430, 1653
AclWI	GGATC	3 cut(s)	742, 1525, 1636
AcoI	YGGCCR	2 cut(s)	1354, 1401
AcsI	RAATTY	2 cut(s)	941, 1586
AcuI	CTGAAG	3 cut(s)	48, 307, 1364
AfaI	GTAC	9 cut(s)	596, 850, 1182, 1448, 1538, 1595, 1820, 1835, 1841
AfiI	CCNNNNNNNGG	8 cut(s)	32, 120, 213, 538, 586, 1420, 1867, 1907
AflII	CTTAAG	1 cut(s)	1492
AflIII	ACRYGT	1 cut(s)	893
AgeI	ACCGGT	1 cut(s)	163
AgsI	TTSAA	4 cut(s)	706, 1141, 1410, 1684
AjnI	CCWGG	7 cut(s)	690, 979, 1084, 1091, 1282, 1340, 1398
AleI	CACNNNNGTG	1 cut(s)	497
AluBI	AGCT	8 cut(s)	371, 526, 614, 1019, 1055, 1556, 1604, 1713
AluI	AGCT	8 cut(s)	371, 526, 614, 1019, 1055, 1556, 1604, 1713
Alw21I	GWGCWC	2 cut(s)	492, 1166
Alw26I	GTCTC	2 cut(s)	278, 690
Alw44I	GTGCAC	2 cut(s)	488, 1162
AlwI	GGATC	3 cut(s)	742, 1525, 1636
AlwNI	CAGNNNCTG	1 cut(s)	1085
AoxI	GGCC	6 cut(s)	291, 626, 1285, 1354, 1396, 1401
ApaLI	GTGCAC	2 cut(s)	488, 1162
ApeKI	GCWGC	7 cut(s)	221, 614, 917, 1052, 1213, 1640, 1670
ApoI	RAATTY	2 cut(s)	941, 1586
AsiGI	ACCGGT	1 cut(s)	163
Asp718I	GGTACC	2 cut(s)	848, 1446
AspLEI	GCGC	3 cut(s)	1079, 1347, 1826
AspS9I	GGNCC	2 cut(s)	1088, 1858
AsuC2I	CCSGG	2 cut(s)	876, 1157
AsuHPI	GGTGA	4 cut(s)	680, 718, 1342, 1696
AsuII	TTCGAA	2 cut(s)	200, 1440
AsuNHI	GCTAGC	1 cut(s)	526
AvaII	GGWCC	2 cut(s)	1088, 1858
BaeGI	GKGCMC	2 cut(s)	492, 1166
BanI	GGYRCC	3 cut(s)	499, 848, 1446
BanII	GRGCYC	1 cut(s)	887
BbsI	GAAGAC	1 cut(s)	829
Bbv12I	GWGCWC	2 cut(s)	492, 1166
BbvCI	CCTCAGC	1 cut(s)	1557
BbvI	GCAGC	7 cut(s)	208, 601, 904, 1064, 1225, 1627, 1682
BccI	CCATC	4 cut(s)	53, 737, 1365, 1858
BceAI	ACGGC	4 cut(s)	144, 1388, 1484, 1708
BciT130I	CCWGG	7 cut(s)	692, 981, 1086, 1093, 1284, 1342, 1400
BciVI	GTATCC	1 cut(s)	1469
BclI	TGATCA	1 cut(s)	1797
BcnI	CCSGG	2 cut(s)	876, 1157
BcoDI	GTCTC	2 cut(s)	278, 690
BfaI	CTAG	3 cut(s)	527, 1485, 1583
BfmI	CTRYAG	2 cut(s)	753, 1058
BfrI	CTTAAG	1 cut(s)	1492
BfuAI	ACCTGC	1 cut(s)	1843
BfuI	GTATCC	1 cut(s)	1469
BglI	GCCNNNNNGGC	1 cut(s)	1729
BglII	AGATCT	1 cut(s)	1131
BisI	GCNGC	8 cut(s)	222, 615, 918, 1053, 1214, 1431, 1641, 1671
BlsI	GCNGC	8 cut(s)	223, 616, 919, 1054, 1215, 1432, 1642, 1672
BmcAI	AGTACT	1 cut(s)	1538
Bme1390I	CCNGG	9 cut(s)	692, 876, 981, 1086, 1093, 1157, 1284, 1342, 1400
Bme18I	GGWCC	2 cut(s)	1088, 1858
BmgT120I	GGNCC	2 cut(s)	1088, 1858
BmiI	GGNNCC	7 cut(s)	157, 501, 850, 884, 978, 1090, 1448
BmrFI	CCNGG	9 cut(s)	692, 876, 981, 1086, 1093, 1157, 1284, 1342, 1400
BmrI	ACTGGG	1 cut(s)	1783
BmsI	GCATC	4 cut(s)	391, 1356, 1600, 1698
BmtI	GCTAGC	1 cut(s)	530
BmuI	ACTGGG	1 cut(s)	1783
BoxI	GACNNNNGTC	1 cut(s)	1086
BpiI	GAAGAC	1 cut(s)	829
BpmI	CTGGAG	4 cut(s)	30, 171, 1114, 1590
Bpu10I	CCTNAGC	1 cut(s)	1557
Bpu14I	TTCGAA	2 cut(s)	200, 1440
BpuEI	CTTGAG	2 cut(s)	888, 1810
BpuMI	CCSGG	2 cut(s)	876, 1157
Bsa29I	ATCGAT	1 cut(s)	737
BsaAI	YACGTR	1 cut(s)	598
BsaBI	GATNNNNATC	2 cut(s)	63, 405
BsaI	GGTCTC	1 cut(s)	278
BsaJI	CCNNGG	6 cut(s)	175, 382, 563, 1084, 1091, 1363
BsaWI	WCCGGW	2 cut(s)	163, 1706
BsaXI	ACNNNNNCTCC	2 cut(s)	1239, 1269
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 120, 213, 538, 586, 1420, 1867, 1907
Bse118I	RCCGGY	4 cut(s)	163, 206, 1352, 1649
Bse3DI	GCAATG	2 cut(s)	1506, 1620
Bse8I	GATNNNNATC	2 cut(s)	63, 405
BseBI	CCWGG	7 cut(s)	692, 981, 1086, 1093, 1284, 1342, 1400
BseCI	ATCGAT	1 cut(s)	737
BseDI	CCNNGG	6 cut(s)	175, 382, 563, 1084, 1091, 1363
BseGI	GGATG	2 cut(s)	171, 1357
BseJI	GATNNNNATC	2 cut(s)	63, 405
BseLI	CCNNNNNNNGG	8 cut(s)	32, 120, 213, 538, 586, 1420, 1867, 1907
BseMI	GCAATG	2 cut(s)	1506, 1620
BseMII	CTCAG	6 cut(s)	87, 1189, 1221, 1303, 1548, 1728
BseRI	GAGGAG	3 cut(s)	92, 1883, 1886
BseSI	GKGCMC	2 cut(s)	492, 1166
BseXI	GCAGC	7 cut(s)	208, 601, 904, 1064, 1225, 1627, 1682
BsgI	GTGCAG	2 cut(s)	360, 1232
Bsh1236I	CGCG	2 cut(s)	794, 895
BshFI	GGCC	6 cut(s)	293, 628, 1287, 1356, 1398, 1403
BshNI	GGYRCC	3 cut(s)	499, 848, 1446
BshTI	ACCGGT	1 cut(s)	163
BshVI	ATCGAT	1 cut(s)	737
BsiHKAI	GWGCWC	2 cut(s)	492, 1166
BsiSI	CCGG	7 cut(s)	164, 207, 876, 1157, 1353, 1650, 1707
BslFI	GGGAC	6 cut(s)	7, 49, 1074, 1294, 1316, 1720
BslI	CCNNNNNNNGG	8 cut(s)	32, 120, 213, 538, 586, 1420, 1867, 1907
BsmAI	GTCTC	2 cut(s)	278, 690
BsmFI	GGGAC	6 cut(s)	7, 49, 1074, 1294, 1316, 1720
BsnI	GGCC	6 cut(s)	293, 628, 1287, 1356, 1398, 1403
Bso31I	GGTCTC	1 cut(s)	278
Bsp119I	TTCGAA	2 cut(s)	200, 1440
Bsp1286I	GDGCHC	3 cut(s)	492, 887, 1166
Bsp143I	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
Bsp19I	CCATGG	1 cut(s)	175
BspACI	CCGC	8 cut(s)	124, 210, 251, 387, 587, 862, 1430, 1653
BspANI	GGCC	6 cut(s)	293, 628, 1287, 1356, 1398, 1403
BspCNI	CTCAG	6 cut(s)	86, 1188, 1220, 1302, 1549, 1727
BspDI	ATCGAT	1 cut(s)	737
BspFNI	CGCG	2 cut(s)	794, 895
BspLI	GGNNCC	7 cut(s)	157, 501, 850, 884, 978, 1090, 1448
BspMAI	CTGCAG	2 cut(s)	757, 1062
BspMI	ACCTGC	1 cut(s)	1843
BspOI	GCTAGC	1 cut(s)	530
BspPI	GGATC	3 cut(s)	742, 1525, 1636
BspT104I	TTCGAA	2 cut(s)	200, 1440
BspT107I	GGYRCC	3 cut(s)	499, 848, 1446
BspTI	CTTAAG	1 cut(s)	1492
BspTNI	GGTCTC	1 cut(s)	278
BsrDI	GCAATG	2 cut(s)	1506, 1620
BsrFI	RCCGGY	4 cut(s)	163, 206, 1352, 1649
BssAI	RCCGGY	4 cut(s)	163, 206, 1352, 1649
BssECI	CCNNGG	6 cut(s)	175, 382, 563, 1084, 1091, 1363
BssMI	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
BssT1I	CCWWGG	2 cut(s)	175, 382
Bst2UI	CCWGG	7 cut(s)	692, 981, 1086, 1093, 1284, 1342, 1400
Bst4CI	ACNGT	7 cut(s)	487, 564, 1108, 1308, 1338, 1367, 1786
Bst6I	CTCTTC	2 cut(s)	923, 1613
BstAFI	CTTAAG	1 cut(s)	1492
BstBAI	YACGTR	1 cut(s)	598
BstBI	TTCGAA	2 cut(s)	200, 1440
BstC8I	GCNNGC	8 cut(s)	369, 528, 555, 619, 1162, 1218, 1271, 1651
BstDEI	CTNAG	8 cut(s)	73, 1175, 1207, 1289, 1511, 1557, 1714, 1904
BstDSI	CCRYGG	3 cut(s)	175, 563, 1363
BstENI	CCTNNNNNAGG	1 cut(s)	30
BstF5I	GGATG	2 cut(s)	171, 1357
BstFNI	CGCG	2 cut(s)	794, 895
BstHHI	GCGC	3 cut(s)	1079, 1347, 1826
BstKTI	GATC	8 cut(s)	196, 514, 737, 741, 1134, 1533, 1631, 1800
BstMAI	GTCTC	2 cut(s)	278, 690
BstMBI	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
BstMWI	GCNNNNNNNGC	7 cut(s)	752, 1353, 1430, 1610, 1640, 1646, 1729
BstNI	CCWGG	7 cut(s)	692, 981, 1086, 1093, 1284, 1342, 1400
BstNSI	RCATGY	2 cut(s)	1269, 1273
BstPAI	GACNNNNGTC	1 cut(s)	1086
BstSCI	CCNGG	9 cut(s)	690, 874, 979, 1084, 1091, 1155, 1282, 1340, 1398
BstSFI	CTRYAG	2 cut(s)	753, 1058
BstSLI	GKGCMC	2 cut(s)	492, 1166
BstSNI	TACGTA	1 cut(s)	598
BstUI	CGCG	2 cut(s)	794, 895
BstV1I	GCAGC	7 cut(s)	208, 601, 904, 1064, 1225, 1627, 1682
BstV2I	GAAGAC	1 cut(s)	829
BstX2I	RGATCY	2 cut(s)	1131, 1628
BstYI	RGATCY	2 cut(s)	1131, 1628
Bsu15I	ATCGAT	1 cut(s)	737
BsuI	GTATCC	1 cut(s)	1469
BsuRI	GGCC	6 cut(s)	293, 628, 1287, 1356, 1398, 1403
BsuTUI	ATCGAT	1 cut(s)	737
BtgI	CCRYGG	3 cut(s)	175, 563, 1363
BtgZI	GCGATG	1 cut(s)	727
BtsCI	GGATG	2 cut(s)	171, 1357
BtsI	GCAGTG	1 cut(s)	750
BtsIMutI	CAGTG	8 cut(s)	750, 803, 1104, 1183, 1215, 1281, 1334, 1912
BveI	ACCTGC	1 cut(s)	1843
Cac8I	GCNNGC	8 cut(s)	369, 528, 555, 619, 1162, 1218, 1271, 1651
CaiI	CAGNNNCTG	1 cut(s)	1085
CfoI	GCGC	3 cut(s)	1079, 1347, 1826
Cfr10I	RCCGGY	4 cut(s)	163, 206, 1352, 1649
Cfr13I	GGNCC	2 cut(s)	1088, 1858
ClaI	ATCGAT	1 cut(s)	737
Csp6I	GTAC	9 cut(s)	595, 849, 1181, 1447, 1537, 1594, 1819, 1834, 1840
CspAI	ACCGGT	1 cut(s)	163
CspCI	CAANNNNNGTGG	2 cut(s)	148, 183
CviAII	CATG	7 cut(s)	176, 286, 298, 630, 832, 1266, 1270
CviQI	GTAC	9 cut(s)	595, 849, 1181, 1447, 1537, 1594, 1819, 1834, 1840
DdeI	CTNAG	8 cut(s)	73, 1175, 1207, 1289, 1511, 1557, 1714, 1904
DpnI	GATC	8 cut(s)	195, 513, 736, 740, 1133, 1532, 1630, 1799
DpnII	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
DraI	TTTAAA	1 cut(s)	1230
EaeI	YGGCCR	2 cut(s)	1354, 1401
Eam1104I	CTCTTC	2 cut(s)	923, 1613
EarI	CTCTTC	2 cut(s)	923, 1613
EciI	GGCGGA	2 cut(s)	139, 266
Eco105I	TACGTA	1 cut(s)	598
Eco130I	CCWWGG	2 cut(s)	175, 382
Eco147I	AGGCCT	1 cut(s)	1398
Eco24I	GRGCYC	1 cut(s)	887
Eco31I	GGTCTC	1 cut(s)	278
Eco47I	GGWCC	2 cut(s)	1088, 1858
Eco57I	CTGAAG	3 cut(s)	48, 307, 1364
EcoNI	CCTNNNNNAGG	1 cut(s)	30
EcoRII	CCWGG	7 cut(s)	690, 979, 1084, 1091, 1282, 1340, 1398
EcoT14I	CCWWGG	2 cut(s)	175, 382
EcoT22I	ATGCAT	2 cut(s)	315, 1271
EcoT38I	GRGCYC	1 cut(s)	887
ErhI	CCWWGG	2 cut(s)	175, 382
FaeI	CATG	7 cut(s)	179, 289, 301, 633, 835, 1269, 1273
FaqI	GGGAC	6 cut(s)	7, 49, 1074, 1294, 1316, 1720
FatI	CATG	7 cut(s)	175, 285, 297, 629, 831, 1265, 1269
FauNDI	CATATG	1 cut(s)	1239
FbaI	TGATCA	1 cut(s)	1797
FblI	GTMKAC	1 cut(s)	762
Fnu4HI	GCNGC	8 cut(s)	222, 615, 918, 1053, 1214, 1431, 1641, 1671
FokI	GGATG	2 cut(s)	158, 1344
FriOI	GRGCYC	1 cut(s)	887
Fsp4HI	GCNGC	8 cut(s)	222, 615, 918, 1053, 1214, 1431, 1641, 1671
FspBI	CTAG	3 cut(s)	527, 1485, 1583
FspI	TGCGCA	1 cut(s)	1825
GlaI	GCGC	3 cut(s)	1078, 1346, 1825
GluI	GCNGC	8 cut(s)	222, 615, 918, 1053, 1214, 1431, 1641, 1671
GsuI	CTGGAG	4 cut(s)	30, 171, 1114, 1590
HaeIII	GGCC	6 cut(s)	293, 628, 1287, 1356, 1398, 1403
HapII	CCGG	7 cut(s)	164, 207, 876, 1157, 1353, 1650, 1707
HhaI	GCGC	3 cut(s)	1079, 1347, 1826
Hin1II	CATG	7 cut(s)	179, 289, 301, 633, 835, 1269, 1273
Hin6I	GCGC	3 cut(s)	1077, 1345, 1824
HinP1I	GCGC	3 cut(s)	1077, 1345, 1824
HincII	GTYRAC	2 cut(s)	169, 346
HindII	GTYRAC	2 cut(s)	169, 346
HindIII	AAGCTT	1 cut(s)	369
HinfI	GANTC	4 cut(s)	71, 110, 606, 789
HpaI	GTTAAC	1 cut(s)	346
HpaII	CCGG	7 cut(s)	164, 207, 876, 1157, 1353, 1650, 1707
HphI	GGTGA	4 cut(s)	680, 718, 1342, 1696
Hpy166II	GTNNAC	7 cut(s)	169, 346, 490, 763, 1164, 1181, 1247
Hpy188I	TCNGA	8 cut(s)	76, 115, 239, 523, 611, 734, 1383, 1717
Hpy188III	TCNNGA	6 cut(s)	68, 277, 948, 1607, 1789, 1861
Hpy8I	GTNNAC	7 cut(s)	169, 346, 490, 763, 1164, 1181, 1247
Hpy99I	CGWCG	2 cut(s)	665, 1031
HpyAV	CCTTC	7 cut(s)	23, 235, 304, 331, 757, 994, 1446
HpyCH4III	ACNGT	7 cut(s)	487, 564, 1108, 1308, 1338, 1367, 1786
HpyCH4IV	ACGT	2 cut(s)	597, 765
HpyF10VI	GCNNNNNNNGC	7 cut(s)	752, 1353, 1430, 1610, 1640, 1646, 1729
HpyF3I	CTNAG	8 cut(s)	73, 1175, 1207, 1289, 1511, 1557, 1714, 1904
HpySE526I	ACGT	2 cut(s)	597, 765
Hsp92II	CATG	7 cut(s)	179, 289, 301, 633, 835, 1269, 1273
HspAI	GCGC	3 cut(s)	1077, 1345, 1824
KpnI	GGTACC	2 cut(s)	852, 1450
KroI	GCCGGC	1 cut(s)	1649
KroNI	GCCGGC	1 cut(s)	1651
Ksp22I	TGATCA	1 cut(s)	1797
KspAI	GTTAAC	1 cut(s)	346
Kzo9I	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
LmnI	GCTCC	5 cut(s)	524, 611, 882, 1609, 1849
Lsp1109I	GCAGC	7 cut(s)	208, 601, 904, 1064, 1225, 1627, 1682
LweI	GCATC	4 cut(s)	391, 1356, 1600, 1698
MaeI	CTAG	3 cut(s)	527, 1485, 1583
MaeII	ACGT	2 cut(s)	597, 765
MaeIII	GTNAC	5 cut(s)	598, 724, 801, 1108, 1261
MalI	GATC	8 cut(s)	195, 513, 736, 740, 1133, 1532, 1630, 1799
MboI	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
MfeI	CAATTG	1 cut(s)	544
MflI	RGATCY	2 cut(s)	1131, 1628
MhlI	GDGCHC	3 cut(s)	492, 887, 1166
MluCI	AATT	7 cut(s)	349, 544, 941, 1434, 1456, 1586, 1801
MluI	ACGCGT	1 cut(s)	893
MlyI	GAGTC	1 cut(s)	65
Mph1103I	ATGCAT	2 cut(s)	315, 1271
MroNI	GCCGGC	1 cut(s)	1649
MseI	TTAA	5 cut(s)	282, 345, 1064, 1229, 1493
MslI	CAYNNNNRTG	4 cut(s)	497, 1169, 1238, 1274
MspCI	CTTAAG	1 cut(s)	1492
MspI	CCGG	7 cut(s)	164, 207, 876, 1157, 1353, 1650, 1707
MspR9I	CCNGG	9 cut(s)	692, 876, 981, 1086, 1093, 1157, 1284, 1342, 1400
MunI	CAATTG	1 cut(s)	544
MvaI	CCWGG	7 cut(s)	692, 981, 1086, 1093, 1284, 1342, 1400
MvnI	CGCG	2 cut(s)	794, 895
MwoI	GCNNNNNNNGC	7 cut(s)	752, 1353, 1430, 1610, 1640, 1646, 1729
NaeI	GCCGGC	1 cut(s)	1651
NciI	CCSGG	2 cut(s)	876, 1157
NcoI	CCATGG	1 cut(s)	175
NdeI	CATATG	1 cut(s)	1239
NdeII	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
NgoMIV	GCCGGC	1 cut(s)	1649
NheI	GCTAGC	1 cut(s)	526
NlaIII	CATG	7 cut(s)	179, 289, 301, 633, 835, 1269, 1273
NlaIV	GGNNCC	7 cut(s)	157, 501, 850, 884, 978, 1090, 1448
NmuCI	GTSAC	3 cut(s)	724, 801, 1108
NsbI	TGCGCA	1 cut(s)	1825
NsiI	ATGCAT	2 cut(s)	315, 1271
NspI	RCATGY	2 cut(s)	1269, 1273
NspV	TTCGAA	2 cut(s)	200, 1440
OliI	CACNNNNGTG	1 cut(s)	497
PaeI	GCATGC	1 cut(s)	1273
PaqCI	CACCTGC	1 cut(s)	1843
PceI	AGGCCT	1 cut(s)	1398
PdiI	GCCGGC	1 cut(s)	1651
PfeI	GAWTC	3 cut(s)	110, 606, 789
PfoI	TCCNGGA	2 cut(s)	874, 979
PinAI	ACCGGT	1 cut(s)	163
PkrI	GCNGC	8 cut(s)	223, 616, 919, 1054, 1215, 1432, 1642, 1672
PleI	GAGTC	1 cut(s)	65
PpsI	GAGTC	1 cut(s)	65
Ppu21I	YACGTR	1 cut(s)	598
PshAI	GACNNNNGTC	1 cut(s)	1086
Psp6I	CCWGG	7 cut(s)	690, 979, 1084, 1091, 1282, 1340, 1398
PspGI	CCWGG	7 cut(s)	690, 979, 1084, 1091, 1282, 1340, 1398
PspN4I	GGNNCC	7 cut(s)	157, 501, 850, 884, 978, 1090, 1448
PspPI	GGNCC	2 cut(s)	1088, 1858
PstI	CTGCAG	2 cut(s)	757, 1062
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	2 cut(s)	1131, 1628
RsaI	GTAC	9 cut(s)	596, 850, 1182, 1448, 1538, 1595, 1820, 1835, 1841
RsaNI	GTAC	9 cut(s)	595, 849, 1181, 1447, 1537, 1594, 1819, 1834, 1840
RseI	CAYNNNNRTG	4 cut(s)	497, 1169, 1238, 1274
SaqAI	TTAA	5 cut(s)	282, 345, 1064, 1229, 1493
SatI	GCNGC	8 cut(s)	222, 615, 918, 1053, 1214, 1431, 1641, 1671
Sau3AI	GATC	8 cut(s)	193, 511, 734, 738, 1131, 1530, 1628, 1797
Sau96I	GGNCC	2 cut(s)	1088, 1858
ScaI	AGTACT	1 cut(s)	1538
SchI	GAGTC	1 cut(s)	65
ScrFI	CCNGG	9 cut(s)	692, 876, 981, 1086, 1093, 1157, 1284, 1342, 1400
SduI	GDGCHC	3 cut(s)	492, 887, 1166
SfaNI	GCATC	4 cut(s)	391, 1356, 1600, 1698
SfcI	CTRYAG	2 cut(s)	753, 1058
SfuI	TTCGAA	2 cut(s)	200, 1440
SinI	GGWCC	2 cut(s)	1088, 1858
SmiMI	CAYNNNNRTG	4 cut(s)	497, 1169, 1238, 1274
SmlI	CTYRAG	3 cut(s)	903, 1492, 1789
SmoI	CTYRAG	3 cut(s)	903, 1492, 1789
SnaBI	TACGTA	1 cut(s)	598
SphI	GCATGC	1 cut(s)	1273
Sse9I	AATT	7 cut(s)	349, 544, 941, 1434, 1456, 1586, 1801
SseBI	AGGCCT	1 cut(s)	1398
SsiI	CCGC	8 cut(s)	124, 210, 251, 387, 587, 862, 1430, 1653
SspMI	CTAG	3 cut(s)	527, 1485, 1583
StuI	AGGCCT	1 cut(s)	1398
StyD4I	CCNGG	9 cut(s)	690, 874, 979, 1084, 1091, 1155, 1282, 1340, 1398
StyI	CCWWGG	2 cut(s)	175, 382
TaaI	ACNGT	7 cut(s)	487, 564, 1108, 1308, 1338, 1367, 1786
TaiI	ACGT	2 cut(s)	600, 768
TaqI	TCGA	7 cut(s)	108, 200, 278, 415, 660, 737, 1440
TaqII	GACCGA	1 cut(s)	260
TasI	AATT	7 cut(s)	349, 544, 941, 1434, 1456, 1586, 1801
TatI	WGTACW	4 cut(s)	1180, 1536, 1818, 1839
TauI	GCSGC	1 cut(s)	1433
TfiI	GAWTC	3 cut(s)	110, 606, 789
Tru1I	TTAA	5 cut(s)	282, 345, 1064, 1229, 1493
Tru9I	TTAA	5 cut(s)	282, 345, 1064, 1229, 1493
TscAI	CASTG	8 cut(s)	757, 810, 1111, 1183, 1215, 1281, 1341, 1912
TseFI	GTSAC	3 cut(s)	724, 801, 1108
TseI	GCWGC	7 cut(s)	221, 614, 917, 1052, 1213, 1640, 1670
Tsp45I	GTSAC	3 cut(s)	724, 801, 1108
TspDTI	ATGAA	7 cut(s)	94, 220, 258, 286, 321, 788, 1631
TspGWI	ACGGA	1 cut(s)	1862
TspRI	CASTG	8 cut(s)	757, 810, 1111, 1183, 1215, 1281, 1341, 1912
Vha464I	CTTAAG	1 cut(s)	1492
VneI	GTGCAC	2 cut(s)	488, 1162
VpaK11BI	GGWCC	2 cut(s)	1088, 1858
XagI	CCTNNNNNAGG	1 cut(s)	30
XapI	RAATTY	2 cut(s)	941, 1586
XceI	RCATGY	2 cut(s)	1269, 1273
XcmI	CCANNNNNNNNNTGG	1 cut(s)	776
XmiI	GTMKAC	1 cut(s)	762
XspI	CTAG	3 cut(s)	527, 1485, 1583
ZrmI	AGTACT	1 cut(s)	1538
Zsp2I	ATGCAT	2 cut(s)	315, 1271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.