Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002004

Physical Location & Seq

Genomic Coordinates Forward (+)

39233080 .. 39238616

Gene Structure 5537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0228000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCAGTGTCGGCCGATCATTGCCGGATTTCCCTCTCCGCTGCCATCCAGTCATGCGGCGCAGCGGGGCTGGCGGGGAGGAATCCGAGGGGGCTTGTGAAGTTTTGCAATGGAGAAGTGATGGGGAAGAAACTGCAGCTGAGTCAGGTTCAGCAAGGAGGTGGTAGCATGAAGAATAAGAAGAATGGACATGTTTGTATGTCTCTTACTGCCGCTGATGTAATTGGTGAGGTCAAGCTGGCAATTGGTCTAGTGCAGTTAAGGGACATGGATGTAGAGAGGCGAAATCCAAAGACCGTCGTTGCAATTGTACTGGGAGGTGGAGCTGGTACTCGTCTTTTCCCACTCACCAAACGGCGAGCAAAGCCTGCTGTCCCAATAGGGGGAGCATACAGACTTATTGATGTGCCAATGAGCAACTGCATCAACAGTGGAATCAACAAAGTCTATATCCTCACTCAGTACAACTCAGCATCACTCAACAGGCACATTTCCCGCGCTTACAACTTTGGCAGCGGTACAACATTTGGCGATGGCTATGTAGAGGTTCTAGCTGCTACTCAAACGCCAGGAGAGTCAGGTCAGATGTGGTTCCAGGGCACCGCAGATGCTGTTCGACAGTTCCATTGGCTTTTTGAGGATGCAAGAAGTAGAGACATTGAGGATGTCCTGATTCTATCTGGAGATCACTTGTATCGAATGGACTACATGGACTACATTCAAAATCACCGGGAAAGTGGTGCAGATATTACCATTTCTTGTTTGCCAATGGATGACAGTCGTGCCTCAGATTTTGGTCTGATGAAGATAGACAAGAAAGGAAAGGTCCTCTCGTTCAGTGAAAAGCCTAAAGGAGCTGACCTGAAGGCAATGGCAGTAGATACGACAGTTCTGGGACTTTCTGTGGATGAGGCAGTAAAGAAGCCATACATTGCTTCAATGGGAGTGTACGTCTTCAAGAAGGAGATACTTCTGAATCTTCTAAGATGGCGCTTCCCGACTGCAAATGACTTTGGATCAGAGATTATTCCAGCCTCAGCTAATGAATTTTTCGTAAAGGCTTATCTGTTTAATGATTACTGGGAAGACATCGGAACCATCAGATCCTTCTTCGAGGCAAACCTTGCCCTCACTCAGCATCCAAACAAGTTTAGTTTCTATGATGCAGCAAAGCCAATGTATACTTCAAGAAGAAACTTACCTCCATCAAAGATTGATGGTAGCAAGATTGTTGACTCCATCATATCGCATGGAAGTTTCTTAACCAATTGCTTTATAGAGCACAGTGTTGTCGGTATCAGATCCCGGATAAACGCAAATGTTCACCTTAAGGACACCGTGATGCTTGGTGCGGATTACTACGAAACCGATTCTGAGGTGGTATCACTGTTAGCTGAAGGAAGAGTTCCCGTTGGAATAGGAGAGAACACAAAGATCAAAGACTGCATTATTGACAAAAACGCTAGAATCGGGAAGAATGTTGTTATTGCAAACACCGAGGGAGTACAAGAGGCTGACAGATCTTCGGAAGGGTTTTACATCCGCTCTGGTGTAACTGTTATATTGAAAAATTCAACTATCCAAGATGGACTTTCGATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2 zf-rbx1

Protein Analysis

533

Amino Acids

58.37

Weight (kDa)

8.58

Isoelectric Point (pI)

34.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTP_transferase	PF00483	102 - 379	2.3e-69	Nucleotidyl transferase
LbH_GLGC	PF25247	398 - 530	5.2e-50	GLGC left-handed parallel beta-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69085
fragaria_vesca	FvH4_4g22510 FvH4_4g22510 FvH4_4g22510 FvH4_4g22510 FvH4_4g29590
malus_domestica	MD13G1059100.v1.1 MD13G1131900.v1.1 MD16G1142200.v1.1
prunus_persica	Prupe.1G213500_v2.0.a1 Prupe.1G213500_v2.0.a1 Prupe.1G290700_v2.0.a1
pyrus_communis	pycom13g05270 pycom13g11490 pycom16g11270
rosa_chinensis	RchiOBHm_Chr4g0428741 RchiOBHm_Chr4g0437831
rosa_laevigata	RLG00000006409 RLG00000007130
rosa_multiflora	Rmu_sc0004193.1_g000009 Rmu_sc0010032.1_g000003
rosa_roxburghii	Rroxscaffold_1G00025140 Rroxscaffold_2G00125470 Rroxscaffold_4G00303240 Rroxscaffold_4G00325060 Rroxscaffold_5G00370400 Rroxscaffold_5G00379000 Rroxscaffold_7G00190540
rosa_rugosa	Rorug04G0227900 Rorug04G0228000 Rorug04G0304000 Rorug04G0304100
rosa_samantha	Rh4AG285300 Rh4AG356400 Rh4BG291300 Rh4BG367300 Rh4CG307100 Rh4CG381300 Rh4DG288400 Rh4DG361600 Rh7AG038600 Rh7CG039800 Rh7DG038300
rosa_wichuraiana	Rw4G024740 Rw4G031430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	599
AccBSI	CCGCTC	1 cut(s)	1545
AccI	GTMKAC	1 cut(s)	1181
AccII	CGCG	1 cut(s)	498
AclWI	GGATC	3 cut(s)	1024, 1098, 1296
AcoI	YGGCCR	1 cut(s)	12
AcsI	RAATTY	2 cut(s)	1046, 1570
AcuI	CTGAAG	2 cut(s)	884, 1416
AfaI	GTAC	6 cut(s)	312, 331, 464, 520, 950, 1506
AfiI	CCNNNNNNNGG	2 cut(s)	382, 383
AflII	CTTAAG	1 cut(s)	1328
AflIII	ACRYGT	1 cut(s)	190
AgsI	TTSAA	6 cut(s)	722, 939, 958, 1188, 1567, 1575
AjnI	CCWGG	2 cut(s)	568, 594
AjuI	GAANNNNNNNTTGG	2 cut(s)	1168, 1200
AluBI	AGCT	7 cut(s)	139, 238, 326, 554, 857, 1040, 1394
AluI	AGCT	7 cut(s)	139, 238, 326, 554, 857, 1040, 1394
Alw21I	GWGCWC	1 cut(s)	1284
Alw26I	GTCTC	2 cut(s)	207, 648
AlwI	GGATC	3 cut(s)	1024, 1098, 1296
AlwNI	CAGNNNCTG	1 cut(s)	611
AoxI	GGCC	1 cut(s)	12
ApeKI	GCWGC	6 cut(s)	41, 62, 136, 513, 554, 1166
ApoI	RAATTY	2 cut(s)	1046, 1570
AspLEI	GCGC	3 cut(s)	62, 500, 993
AspS9I	GGNCC	1 cut(s)	826
AsuC2I	CCSGG	2 cut(s)	731, 1306
AsuHPI	GGTGA	4 cut(s)	239, 340, 719, 1316
AvaII	GGWCC	1 cut(s)	826
BaeGI	GKGCMC	1 cut(s)	602
BaeI	ACNNNNGTAYC	2 cut(s)	873, 906
BanI	GGYRCC	1 cut(s)	599
BbsI	GAAGAC	2 cut(s)	946, 1092
Bbv12I	GWGCWC	1 cut(s)	1284
BbvCI	CCTCAGC	1 cut(s)	1036
BbvI	GCAGC	6 cut(s)	28, 74, 148, 525, 541, 1178
BccI	CCATC	9 cut(s)	53, 115, 527, 981, 1106, 1211, 1213, 1247, 1580
BceAI	ACGGC	1 cut(s)	371
BciT130I	CCWGG	2 cut(s)	570, 596
BcnI	CCSGG	2 cut(s)	731, 1306
BcoDI	GTCTC	2 cut(s)	207, 648
BfaI	CTAG	3 cut(s)	251, 551, 1464
BfmI	CTRYAG	1 cut(s)	134
BfoI	RGCGCY	1 cut(s)	994
BfrI	CTTAAG	1 cut(s)	1328
BglII	AGATCT	1 cut(s)	1520
BisI	GCNGC	8 cut(s)	42, 58, 63, 137, 213, 514, 555, 1167
BlsI	GCNGC	8 cut(s)	43, 59, 64, 138, 214, 515, 556, 1168
Bme1390I	CCNGG	4 cut(s)	570, 596, 731, 1306
Bme18I	GGWCC	1 cut(s)	826
BmgT120I	GGNCC	1 cut(s)	826
BmiI	GGNNCC	3 cut(s)	593, 601, 1096
BmrFI	CCNGG	4 cut(s)	570, 596, 731, 1306
BmrI	ACTGGG	2 cut(s)	323, 1090
BmsI	GCATC	7 cut(s)	432, 482, 598, 631, 1147, 1153, 1332
BmuI	ACTGGG	2 cut(s)	323, 1090
BpiI	GAAGAC	2 cut(s)	946, 1092
BpmI	CTGGAG	1 cut(s)	702
Bpu10I	CCTNAGC	1 cut(s)	1036
BpuMI	CCSGG	2 cut(s)	731, 1306
BsaJI	CCNNGG	3 cut(s)	86, 595, 1497
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	2 cut(s)	382, 383
Bse1I	ACTGG	3 cut(s)	49, 318, 1085
Bse3DI	GCAATG	4 cut(s)	19, 115, 876, 930
BseBI	CCWGG	2 cut(s)	570, 596
BseDI	CCNNGG	3 cut(s)	86, 595, 1497
BseGI	GGATG	8 cut(s)	45, 277, 646, 670, 778, 913, 1138, 1539
BseLI	CCNNNNNNNGG	2 cut(s)	382, 383
BseMI	GCAATG	4 cut(s)	19, 115, 876, 930
BseMII	CTCAG	7 cut(s)	131, 473, 483, 801, 1050, 1148, 1365
BseNI	ACTGG	3 cut(s)	49, 318, 1085
BseSI	GKGCMC	1 cut(s)	602
BseX3I	CGGCCG	1 cut(s)	12
BseXI	GCAGC	6 cut(s)	28, 74, 148, 525, 541, 1178
BsgI	GTGCAG	2 cut(s)	275, 762
Bsh1236I	CGCG	1 cut(s)	498
Bsh1285I	CGRYCG	1 cut(s)	15
BshFI	GGCC	1 cut(s)	14
BshNI	GGYRCC	1 cut(s)	599
BsiEI	CGRYCG	1 cut(s)	15
BsiHKAI	GWGCWC	1 cut(s)	1284
BsiSI	CCGG	3 cut(s)	25, 730, 1306
BslFI	GGGAC	3 cut(s)	278, 359, 909
BslI	CCNNNNNNNGG	2 cut(s)	382, 383
BsmAI	GTCTC	2 cut(s)	207, 648
BsmFI	GGGAC	3 cut(s)	278, 359, 909
BsnI	GGCC	1 cut(s)	14
Bsp1286I	GDGCHC	2 cut(s)	602, 1284
Bsp143I	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
BspANI	GGCC	1 cut(s)	14
BspCNI	CTCAG	7 cut(s)	132, 472, 482, 800, 1049, 1147, 1366
BspFNI	CGCG	1 cut(s)	498
BspLI	GGNNCC	3 cut(s)	593, 601, 1096
BspMAI	CTGCAG	1 cut(s)	138
BspPI	GGATC	3 cut(s)	1024, 1098, 1296
BspT107I	GGYRCC	1 cut(s)	599
BspTI	CTTAAG	1 cut(s)	1328
BsrBI	CCGCTC	1 cut(s)	1545
BsrDI	GCAATG	4 cut(s)	19, 115, 876, 930
BsrI	ACTGG	3 cut(s)	49, 318, 1085
BssECI	CCNNGG	3 cut(s)	86, 595, 1497
BssMI	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
BssNAI	GTATAC	1 cut(s)	1182
Bst1107I	GTATAC	1 cut(s)	1182
Bst2UI	CCWGG	2 cut(s)	570, 596
Bst4CI	ACNGT	9 cut(s)	298, 431, 621, 779, 889, 1286, 1339, 1389, 1558
Bst6I	CTCTTC	1 cut(s)	1396
BstAFI	CTTAAG	1 cut(s)	1328
BstAPI	GCANNNNNTGC	2 cut(s)	368, 1124
BstC8I	GCNNGC	4 cut(s)	72, 240, 360, 369
BstDEI	CTNAG	8 cut(s)	140, 459, 469, 787, 983, 1036, 1134, 1374
BstF5I	GGATG	8 cut(s)	45, 277, 646, 670, 778, 913, 1138, 1539
BstFNI	CGCG	1 cut(s)	498
BstH2I	RGCGCY	1 cut(s)	994
BstHHI	GCGC	3 cut(s)	62, 500, 993
BstKTI	GATC	8 cut(s)	19, 688, 1019, 1106, 1304, 1437, 1523, 1599
BstMAI	GTCTC	2 cut(s)	207, 648
BstMBI	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
BstMCI	CGRYCG	1 cut(s)	15
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 71, 364, 368, 1124
BstNI	CCWGG	2 cut(s)	570, 596
BstNSI	RCATGY	1 cut(s)	194
BstSCI	CCNGG	4 cut(s)	568, 594, 729, 1304
BstSFI	CTRYAG	1 cut(s)	134
BstSLI	GKGCMC	1 cut(s)	602
BstUI	CGCG	1 cut(s)	498
BstV1I	GCAGC	6 cut(s)	28, 74, 148, 525, 541, 1178
BstV2I	GAAGAC	2 cut(s)	946, 1092
BstX2I	RGATCY	3 cut(s)	1103, 1301, 1520
BstYI	RGATCY	3 cut(s)	1103, 1301, 1520
BstZ17I	GTATAC	1 cut(s)	1182
BstZI	CGGCCG	1 cut(s)	12
BsuRI	GGCC	1 cut(s)	14
BtgZI	GCGATG	1 cut(s)	546
BtsCI	GGATG	8 cut(s)	45, 277, 646, 670, 778, 913, 1138, 1539
BtsI	GCAGTG	1 cut(s)	12
BtsIMutI	CAGTG	5 cut(s)	12, 436, 844, 1291, 1385
Cac8I	GCNNGC	4 cut(s)	72, 240, 360, 369
CaiI	CAGNNNCTG	1 cut(s)	611
CfoI	GCGC	3 cut(s)	62, 500, 993
Cfr13I	GGNCC	1 cut(s)	826
Csp6I	GTAC	6 cut(s)	311, 330, 463, 519, 949, 1505
CviAII	CATG	6 cut(s)	54, 169, 191, 268, 709, 1250
CviQI	GTAC	6 cut(s)	311, 330, 463, 519, 949, 1505
DdeI	CTNAG	8 cut(s)	140, 459, 469, 787, 983, 1036, 1134, 1374
DpnI	GATC	8 cut(s)	18, 687, 1018, 1105, 1303, 1436, 1522, 1598
DpnII	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
EaeI	YGGCCR	1 cut(s)	12
EagI	CGGCCG	1 cut(s)	12
Eam1104I	CTCTTC	1 cut(s)	1396
EarI	CTCTTC	1 cut(s)	1396
EclXI	CGGCCG	1 cut(s)	12
Eco47I	GGWCC	1 cut(s)	826
Eco52I	CGGCCG	1 cut(s)	12
Eco57I	CTGAAG	2 cut(s)	884, 1416
EcoO109I	RGGNCCY	1 cut(s)	826
EcoRII	CCWGG	2 cut(s)	568, 594
FaeI	CATG	6 cut(s)	57, 172, 194, 271, 712, 1253
FalI	AAGNNNNNCTT	1 cut(s)	1575
FaqI	GGGAC	3 cut(s)	278, 359, 909
FatI	CATG	6 cut(s)	53, 168, 190, 267, 708, 1249
FauI	CCCGC	3 cut(s)	58, 67, 503
FblI	GTMKAC	1 cut(s)	1181
Fnu4HI	GCNGC	8 cut(s)	42, 58, 63, 137, 213, 514, 555, 1167
FokI	GGATG	8 cut(s)	32, 284, 653, 677, 785, 920, 1125, 1526
Fsp4HI	GCNGC	8 cut(s)	42, 58, 63, 137, 213, 514, 555, 1167
FspBI	CTAG	3 cut(s)	251, 551, 1464
GlaI	GCGC	3 cut(s)	61, 499, 992
GluI	GCNGC	8 cut(s)	42, 58, 63, 137, 213, 514, 555, 1167
GsuI	CTGGAG	1 cut(s)	702
HaeII	RGCGCY	1 cut(s)	994
HaeIII	GGCC	1 cut(s)	14
HapII	CCGG	3 cut(s)	25, 730, 1306
HhaI	GCGC	3 cut(s)	62, 500, 993
Hin1II	CATG	6 cut(s)	57, 172, 194, 271, 712, 1253
Hin6I	GCGC	3 cut(s)	60, 498, 991
HinP1I	GCGC	3 cut(s)	60, 498, 991
HincII	GTYRAC	1 cut(s)	1234
HindII	GTYRAC	1 cut(s)	1234
HinfI	GANTC	9 cut(s)	82, 142, 435, 575, 673, 976, 1235, 1370, 1467
HpaII	CCGG	3 cut(s)	25, 730, 1306
HphI	GGTGA	4 cut(s)	239, 340, 719, 1316
Hpy166II	GTNNAC	4 cut(s)	949, 1182, 1234, 1324
Hpy188III	TCNNGA	6 cut(s)	670, 681, 958, 997, 1188, 1471
Hpy8I	GTNNAC	4 cut(s)	949, 1182, 1234, 1324
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	5 cut(s)	859, 955, 1117, 1391, 1523
HpyCH4III	ACNGT	9 cut(s)	298, 431, 621, 779, 889, 1286, 1339, 1389, 1558
HpyCH4IV	ACGT	1 cut(s)	951
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 71, 364, 368, 1124
HpyF3I	CTNAG	8 cut(s)	140, 459, 469, 787, 983, 1036, 1134, 1374
HpySE526I	ACGT	1 cut(s)	951
Hsp92II	CATG	6 cut(s)	57, 172, 194, 271, 712, 1253
HspAI	GCGC	3 cut(s)	60, 498, 991
Kzo9I	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
LmnI	GCTCC	3 cut(s)	323, 386, 854
Lsp1109I	GCAGC	6 cut(s)	28, 74, 148, 525, 541, 1178
LweI	GCATC	7 cut(s)	432, 482, 598, 631, 1147, 1153, 1332
MaeI	CTAG	3 cut(s)	251, 551, 1464
MaeII	ACGT	1 cut(s)	951
MaeIII	GTNAC	1 cut(s)	1552
MalI	GATC	8 cut(s)	18, 687, 1018, 1105, 1303, 1436, 1522, 1598
MbiI	CCGCTC	1 cut(s)	1545
MboI	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
MfeI	CAATTG	3 cut(s)	243, 306, 1267
MflI	RGATCY	3 cut(s)	1103, 1301, 1520
MhlI	GDGCHC	2 cut(s)	602, 1284
MluCI	AATT	6 cut(s)	222, 243, 306, 1046, 1267, 1570
MlyI	GAGTC	3 cut(s)	151, 584, 1229
MmeI	TCCRAC	1 cut(s)	1393
MseI	TTAA	4 cut(s)	260, 1071, 1262, 1329
MslI	CAYNNNNRTG	1 cut(s)	1340
MspA1I	CMGCKG	5 cut(s)	41, 65, 139, 215, 516
MspCI	CTTAAG	1 cut(s)	1328
MspI	CCGG	3 cut(s)	25, 730, 1306
MspR9I	CCNGG	4 cut(s)	570, 596, 731, 1306
MunI	CAATTG	3 cut(s)	243, 306, 1267
MvaI	CCWGG	2 cut(s)	570, 596
MvnI	CGCG	1 cut(s)	498
MwoI	GCNNNNNNNGC	5 cut(s)	11, 71, 364, 368, 1124
NciI	CCSGG	2 cut(s)	731, 1306
NdeII	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
NlaIII	CATG	6 cut(s)	57, 172, 194, 271, 712, 1253
NlaIV	GGNNCC	3 cut(s)	593, 601, 1096
NspI	RCATGY	1 cut(s)	194
PciI	ACATGT	1 cut(s)	190
PfeI	GAWTC	6 cut(s)	82, 435, 673, 976, 1370, 1467
PfoI	TCCNGGA	1 cut(s)	1304
PkrI	GCNGC	8 cut(s)	43, 59, 64, 138, 214, 515, 556, 1168
PleI	GAGTC	3 cut(s)	150, 583, 1229
PpsI	GAGTC	3 cut(s)	150, 583, 1229
PpuMI	RGGWCCY	1 cut(s)	826
PscI	ACATGT	1 cut(s)	190
Psp5II	RGGWCCY	1 cut(s)	826
Psp6I	CCWGG	2 cut(s)	568, 594
PspGI	CCWGG	2 cut(s)	568, 594
PspN4I	GGNNCC	3 cut(s)	593, 601, 1096
PspPI	GGNCC	1 cut(s)	826
PspPPI	RGGWCCY	1 cut(s)	826
PstI	CTGCAG	1 cut(s)	138
PstNI	CAGNNNCTG	1 cut(s)	611
PsuI	RGATCY	3 cut(s)	1103, 1301, 1520
PvuII	CAGCTG	1 cut(s)	139
RsaI	GTAC	6 cut(s)	312, 331, 464, 520, 950, 1506
RsaNI	GTAC	6 cut(s)	311, 330, 463, 519, 949, 1505
RseI	CAYNNNNRTG	1 cut(s)	1340
SaqAI	TTAA	4 cut(s)	260, 1071, 1262, 1329
SatI	GCNGC	8 cut(s)	42, 58, 63, 137, 213, 514, 555, 1167
Sau3AI	GATC	8 cut(s)	16, 685, 1016, 1103, 1301, 1434, 1520, 1596
Sau96I	GGNCC	1 cut(s)	826
SchI	GAGTC	3 cut(s)	151, 584, 1229
ScrFI	CCNGG	4 cut(s)	570, 596, 731, 1306
SduI	GDGCHC	2 cut(s)	602, 1284
SfaNI	GCATC	7 cut(s)	432, 482, 598, 631, 1147, 1153, 1332
SfcI	CTRYAG	1 cut(s)	134
SinI	GGWCC	1 cut(s)	826
SmiMI	CAYNNNNRTG	1 cut(s)	1340
SmlI	CTYRAG	1 cut(s)	1328
SmoI	CTYRAG	1 cut(s)	1328
Sse9I	AATT	6 cut(s)	222, 243, 306, 1046, 1267, 1570
SspMI	CTAG	3 cut(s)	251, 551, 1464
StyD4I	CCNGG	4 cut(s)	568, 594, 729, 1304
TaaI	ACNGT	9 cut(s)	298, 431, 621, 779, 889, 1286, 1339, 1389, 1558
TaiI	ACGT	1 cut(s)	954
TaqI	TCGA	4 cut(s)	616, 697, 1113, 1595
TasI	AATT	6 cut(s)	222, 243, 306, 1046, 1267, 1570
TatI	WGTACW	3 cut(s)	310, 462, 1504
TauI	GCSGC	2 cut(s)	60, 215
TfiI	GAWTC	6 cut(s)	82, 435, 673, 976, 1370, 1467
Tru1I	TTAA	4 cut(s)	260, 1071, 1262, 1329
Tru9I	TTAA	4 cut(s)	260, 1071, 1262, 1329
TscAI	CASTG	5 cut(s)	12, 436, 844, 1291, 1392
TseI	GCWGC	6 cut(s)	41, 62, 136, 513, 554, 1166
TspDTI	ATGAA	3 cut(s)	185, 818, 1059
TspRI	CASTG	5 cut(s)	12, 436, 844, 1291, 1392
Vha464I	CTTAAG	1 cut(s)	1328
VpaK11BI	GGWCC	1 cut(s)	826
XapI	RAATTY	2 cut(s)	1046, 1570
XceI	RCATGY	1 cut(s)	194
XmiI	GTMKAC	1 cut(s)	1181
XspI	CTAG	3 cut(s)	251, 551, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.