ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69085 |
| fragaria_vesca | FvH4_4g22510 FvH4_4g22510 FvH4_4g22510 FvH4_4g22510 FvH4_4g29590 |
| malus_domestica | MD13G1059100.v1.1 MD13G1131900.v1.1 MD16G1142200.v1.1 |
| prunus_persica | Prupe.1G213500_v2.0.a1 Prupe.1G213500_v2.0.a1 Prupe.1G290700_v2.0.a1 |
| pyrus_communis | pycom13g05270 pycom13g11490 pycom16g11270 |
| rosa_chinensis | RchiOBHm_Chr4g0428741 RchiOBHm_Chr4g0437831 |
| rosa_laevigata | RLG00000006409 RLG00000007130 |
| rosa_multiflora | Rmu_sc0004193.1_g000009 Rmu_sc0010032.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00025140 Rroxscaffold_2G00125470 Rroxscaffold_4G00303240 Rroxscaffold_4G00325060 Rroxscaffold_5G00370400 Rroxscaffold_5G00379000 Rroxscaffold_7G00190540 |
| rosa_rugosa | Rorug04G0227900 Rorug04G0228000 Rorug04G0304000 Rorug04G0304100 |
| rosa_samantha | Rh4AG285300 Rh4AG356400 Rh4BG291300 Rh4BG367300 Rh4CG307100 Rh4CG381300 Rh4DG288400 Rh4DG361600 Rh7AG038600 Rh7CG039800 Rh7DG038300 |
| rosa_wichuraiana | Rw4G024740 Rw4G031430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 185, 203 |
| AcsI | RAATTY | 2 cut(s) | 110, 271 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AflIII | ACRYGT | 1 cut(s) | 302 |
| AgsI | TTSAA | 3 cut(s) | 270, 276, 311 |
| ApeKI | GCWGC | 3 cut(s) | 116, 170, 417 |
| ApoI | RAATTY | 2 cut(s) | 110, 271 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 142 |
| AsuC2I | CCSGG | 1 cut(s) | 422 |
| AsuHPI | GGTGA | 2 cut(s) | 347, 436 |
| BanII | GRGCYC | 1 cut(s) | 244 |
| BbvI | GCAGC | 3 cut(s) | 128, 157, 429 |
| BccI | CCATC | 3 cut(s) | 163, 235, 382 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 162, 196 |
| BclI | TGATCA | 1 cut(s) | 163 |
| BcnI | CCSGG | 1 cut(s) | 422 |
| BfmI | CTRYAG | 2 cut(s) | 186, 204 |
| BisI | GCNGC | 3 cut(s) | 117, 171, 418 |
| BlsI | GCNGC | 3 cut(s) | 118, 172, 419 |
| Bme1390I | CCNGG | 1 cut(s) | 422 |
| BmrFI | CCNGG | 1 cut(s) | 422 |
| BmsI | GCATC | 1 cut(s) | 417 |
| BpuMI | CCSGG | 1 cut(s) | 422 |
| BseGI | GGATG | 3 cut(s) | 81, 295, 393 |
| BseXI | GCAGC | 3 cut(s) | 128, 157, 429 |
| BsgI | GTGCAG | 1 cut(s) | 156 |
| BsiSI | CCGG | 1 cut(s) | 421 |
| BsmI | GAATGC | 1 cut(s) | 299 |
| Bsp1286I | GDGCHC | 1 cut(s) | 244 |
| Bsp1407I | TGTACA | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 163 |
| BsrGI | TGTACA | 1 cut(s) | 28 |
| BssMI | GATC | 1 cut(s) | 163 |
| Bst4CI | ACNGT | 1 cut(s) | 407 |
| BstAUI | TGTACA | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 333 |
| BstF5I | GGATG | 3 cut(s) | 81, 295, 393 |
| BstKTI | GATC | 1 cut(s) | 166 |
| BstMBI | GATC | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 176 |
| BstNSI | RCATGY | 1 cut(s) | 306 |
| BstSCI | CCNGG | 1 cut(s) | 420 |
| BstSFI | CTRYAG | 2 cut(s) | 186, 204 |
| BstV1I | GCAGC | 3 cut(s) | 128, 157, 429 |
| BtsCI | GGATG | 3 cut(s) | 81, 295, 393 |
| BtsI | GCAGTG | 1 cut(s) | 353 |
| BtsIMutI | CAGTG | 1 cut(s) | 353 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 289, 324, 353, 388 |
| CviAII | CATG | 5 cut(s) | 26, 263, 284, 303, 343 |
| CviJI | RGCY | 7 cut(s) | 78, 119, 170, 179, 242, 399, 420 |
| CviKI_1 | RGCY | 7 cut(s) | 78, 119, 170, 179, 242, 399, 420 |
| CviQI | GTAC | 1 cut(s) | 29 |
| DdeI | CTNAG | 1 cut(s) | 333 |
| DpnI | GATC | 1 cut(s) | 165 |
| DpnII | GATC | 1 cut(s) | 163 |
| Eco24I | GRGCYC | 1 cut(s) | 244 |
| EcoT38I | GRGCYC | 1 cut(s) | 244 |
| FaeI | CATG | 5 cut(s) | 29, 266, 287, 306, 346 |
| FaiI | YATR | 8 cut(s) | 27, 264, 285, 304, 344, 377, 379, 381 |
| FatI | CATG | 5 cut(s) | 25, 262, 283, 302, 342 |
| FbaI | TGATCA | 1 cut(s) | 163 |
| FblI | GTMKAC | 2 cut(s) | 185, 203 |
| Fnu4HI | GCNGC | 3 cut(s) | 117, 171, 418 |
| FokI | GGATG | 3 cut(s) | 68, 302, 400 |
| FriOI | GRGCYC | 1 cut(s) | 244 |
| Fsp4HI | GCNGC | 3 cut(s) | 117, 171, 418 |
| GluI | GCNGC | 3 cut(s) | 117, 171, 418 |
| HapII | CCGG | 1 cut(s) | 421 |
| Hin1II | CATG | 5 cut(s) | 29, 266, 287, 306, 346 |
| HinfI | GANTC | 4 cut(s) | 143, 200, 266, 440 |
| HpaII | CCGG | 1 cut(s) | 421 |
| HphI | GGTGA | 2 cut(s) | 347, 436 |
| Hpy166II | GTNNAC | 2 cut(s) | 186, 204 |
| Hpy188III | TCNNGA | 3 cut(s) | 127, 231, 447 |
| Hpy8I | GTNNAC | 2 cut(s) | 186, 204 |
| HpyCH4III | ACNGT | 1 cut(s) | 407 |
| HpyCH4V | TGCA | 5 cut(s) | 96, 116, 173, 346, 417 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 176 |
| HpyF3I | CTNAG | 1 cut(s) | 333 |
| Hsp92II | CATG | 5 cut(s) | 29, 266, 287, 306, 346 |
| Ksp22I | TGATCA | 1 cut(s) | 163 |
| Kzo9I | GATC | 1 cut(s) | 163 |
| LpnPI | CCDG | 5 cut(s) | 152, 189, 216, 336, 434 |
| Lsp1109I | GCAGC | 3 cut(s) | 128, 157, 429 |
| LweI | GCATC | 1 cut(s) | 417 |
| MalI | GATC | 1 cut(s) | 165 |
| MboI | GATC | 1 cut(s) | 163 |
| MboII | GAAGA | 1 cut(s) | 323 |
| MhlI | GDGCHC | 1 cut(s) | 244 |
| MluCI | AATT | 2 cut(s) | 110, 271 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MnlI | CCTC | 3 cut(s) | 130, 190, 280 |
| MroXI | GAANNNNTTC | 1 cut(s) | 142 |
| MslI | CAYNNNNRTG | 1 cut(s) | 288 |
| MspI | CCGG | 1 cut(s) | 421 |
| MspR9I | CCNGG | 1 cut(s) | 422 |
| Mva1269I | GAATGC | 1 cut(s) | 299 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 176 |
| NciI | CCSGG | 1 cut(s) | 422 |
| NdeII | GATC | 1 cut(s) | 163 |
| NlaIII | CATG | 5 cut(s) | 29, 266, 287, 306, 346 |
| NspI | RCATGY | 1 cut(s) | 306 |
| PciI | ACATGT | 1 cut(s) | 302 |
| PctI | GAATGC | 1 cut(s) | 299 |
| PdmI | GAANNNNTTC | 1 cut(s) | 142 |
| PfeI | GAWTC | 3 cut(s) | 143, 266, 440 |
| PkrI | GCNGC | 3 cut(s) | 118, 172, 419 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| PscI | ACATGT | 1 cut(s) | 302 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| RseI | CAYNNNNRTG | 1 cut(s) | 288 |
| SatI | GCNGC | 3 cut(s) | 117, 171, 418 |
| Sau3AI | GATC | 1 cut(s) | 163 |
| SchI | GAGTC | 1 cut(s) | 209 |
| ScrFI | CCNGG | 1 cut(s) | 422 |
| SduI | GDGCHC | 1 cut(s) | 244 |
| SetI | ASST | 2 cut(s) | 325, 369 |
| SfaNI | GCATC | 1 cut(s) | 417 |
| SfcI | CTRYAG | 2 cut(s) | 186, 204 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 288 |
| Sse9I | AATT | 2 cut(s) | 110, 271 |
| StyD4I | CCNGG | 1 cut(s) | 420 |
| TaaI | ACNGT | 1 cut(s) | 407 |
| TasI | AATT | 2 cut(s) | 110, 271 |
| TatI | WGTACW | 1 cut(s) | 28 |
| TfiI | GAWTC | 3 cut(s) | 143, 266, 440 |
| TscAI | CASTG | 1 cut(s) | 353 |
| TseI | GCWGC | 3 cut(s) | 116, 170, 417 |
| TspDTI | ATGAA | 3 cut(s) | 70, 306, 396 |
| TspRI | CASTG | 1 cut(s) | 353 |
| XapI | RAATTY | 2 cut(s) | 110, 271 |
| XceI | RCATGY | 1 cut(s) | 306 |
| XmiI | GTMKAC | 2 cut(s) | 185, 203 |
| XmnI | GAANNNNTTC | 1 cut(s) | 142 |