pycom13g29270
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
25827120 .. 25835999
8880 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3984 bp
ATGAAGCACTTCATGCAGCCGAGAAACGCGATATTGAGGGAGATGACGGAGCCTCCCTCGTCGCCAAACCCTATCTCCGCCAAGCCCAGGCCACCTTGGAAGCCCAAGGCCTCCAAGGAGAACGCTCCGCCGTCGGATCCCAACTCCATGATCTCCGATTCTAAACCTTCGCCTGCCACGAAGTTGAAGGGCCCGTTGCCGCCTCGGCCCCCGTCGTCGAACCCTCTCAAGCGGAAGCTCAGCGTTGACTCTCAGACCGCAAACTCCGGCCCTGGAACCTCCGATTCTGGTGTACAGGTAGTGGTGAGAATGCGACCCCCACGAAAGGACAAGGACGAAGGAGAGATGATGGTGCAGAAATTATTTAGTGACTCTTTGTCGATAAATGGACAGACCTTCACATTTGACTCGGTTTGCGACACGGATGCATCACAGCTAGATATTTTCCAGCTTGTAGGAGCACCTCTAGTTGAGAATTGTATGGCAGGTTTTAACAGTTCTGTATTTGCATATGGACAGACGGGAAGCGGAAAGACATACACCATGTGGGGTCCAGCCAATGCCTTGCTGGATGAGAATCTATCAAGTGATCAACAAGGGTTAACCCCCCGTGTTTTTGAGCGTCTTTTTGCTCGCTTAAATGAGGAGCAAATCAAGCACGCTGATAAAGAACTCAAGTATCAGTGCCACTGTTCTTTTCTCGAGATTTACAATGAACAAATCACAGATCTTTTGGATCCAAATCAAAAAAGCCTTCAGATAAGAGAAGATGTTAAATCAGGTGTTTATGTCGAAAATCTCACCGAGGAGTGTGTACGTACAATGAAAGATGTGACTCAGCTTCTGATAAAGGGCTTGTCAAACAGGAGAACAGGTTCAACTAGTATCAATGCTGAGAGTTCCCGCTCACATACTGTATTTACTTGTGTTGTTGAATCTCAATGCAAGAATGTGGCAAATGGTATAAGTTTCAAAACCAGTAGAATAAATCTTGTTGATCGATCTGGGTCAGAGCGTCAGAAGTTAACAGGGGCGGCAGGAGAGCGCTTGAAGGAAGCAGGGAATCTCAATCGATCACTCTCACAGCTTGGGAACCTGATAAACATTCTTGCTGAAATTTCTCAAACGGGAAAGCAAAGGCATATCCCCTATAGAGATTCCAGGCTTACATTCTTATTGCAGGAATCTCTTGGTGGAAATGCAAAGTTAGCAATGGTCTGTGCTATTTCTCCAACACAAAGCTGTAAGAGTGAGACGTTCAGTACATTGAGGTTTGCACAGCGTGCTAAGGCTATCAAGAACAAGGCAGTTGTTAATGAAGCAATGCAGGAAGATGTGAATCAGTTGCGTGAGGTGATACGACAGCTAAGGGATGAACTACGCCGGATTAAGGCAAATGGAAACAACCCAGTTGCTTCAAGTGGAGGTCACAGTGCAACATGGTTTCGTCAAAGTTTGAATATGCTAAAGGCTAGCCTTAAACTTCCAATGACATTACCTCATGTCGATGATGACAGTGATGAGGAGATGGAAATCGATGAAGAAGCTGTTGAGAGGCTTTGTGCTGAAGTAAGTAACCAGACAATTGTCAATGAAGCTAACAACAGAGCTGACGTGAACAGTGTAGACACAATGAAATCACATTCACAACTCGTGGCTGTTCAAATTGGAAGCTCCGAAGTTTCTCAAAGCTATGCATCTGGAAGTGATTGTATCAAAGAACAAGGTGTTGATACAGATGTTAATATGGAAGAAGGAATGTCCGAACAAGGGGACATGATTGTTGAATGTGCTAGCAGCACCCCAGTTATTCCCAGTGCTAGTGCATTGGATCCTCGCAATGTTATAGAAGACACCTCCATGCAGCCTGCTCAGGAGGAAAATATTCTGAGGTCCTCCATTATTGATTTTCTAATTGAAGAATCAGCCTGCAAAAGTGTGGAGGAAGGTTCCTCATGTGCAGCCTCTGATCCTTCAGGAGGCATGCCTGGCTGCCTTTCAGTCGCAGATGAATGCATTGGTTCTCCAAATGGCGTAGTTAACTGTGTTTCTCCATGCCTGAGCATAGTTCCATGCAATGTACCCCAAGTTCTAAAGTCTCCTACCCCCAGTGTTTCACCCAGGGTCAACACCAGCAGGAAAAGTTTGAGGACCTCTTCAATGCTGACTGCTTCTCAGAAGGATCTTACTGGTGGGAGTACGTTAAGCCCAGACGGCATGCACATATCTTTTGGAAAACCTGCAATAAAGAGCTCAGCAAATGACCTATCTGCTCGAGCATGTACTCACTTTTCAGCACCAGCTGAACAGTTGGCAGCAAGCATTCAGCATGGCCTTGAAATTATTGGTAGTCACTGCCAAAGTTCAGCTTTAAGGAAGTCGTCATTCAGATTTTCATTGAAACCTTCAGAGTCCAGGGTGATTTTCCCAGTTTCTAAAGCTGATGTGGGAGTGCAAACTAATCAAGAAATAGTAAAAGATGATTCAGTGGAGTTTATTTGTAATAATTGTAAGAATAGAATGCAGCTAGAGGTCAAGGAGGCAAATGATATTTCAGATATGCAATTGGTACCTGTTGATGGGTCAGAGTCTGCTGACAAATCCAAGATTCAAGTTCCCAAAGCTGTGGAGAAGGTTTTAGCGGGAGCTATTAGGAGAGAAATGGCATTAGAAGACATATGTGCCAAGAAAACTTCAGAGATAATGCAGCTAAACCGATTGGTTCAGCAGTACAAGCATGAGAGAGAATGCAATGGCATTATAGCCCAGACAAGGGAGGATAAGATTCTACGCCTTGAAAGCCTCATGGATGGTGTTTTACCCACTGAGGAGTTCATGGAGGAAGAGCTAGTGTCTCTCACACATGAGTATAAGATCCTGAAGGAGAAATACGAGAATCACCCAGAACTTTTGAGGACAAATATTGAACTGAAAGGAGTTCAAGATGAGTTGGAAAATTTACGAAACTTCTGTGACATGGGTGAAAGGGAAGTATTGTTGGAAGAGATTCAAGATTTAAGAAGCCAGCTACAGTATTACGTAGACTGTTCATCCGCATCAGCCCGGACACGAAACTCTATAATGCAGTTGACCTATTCACGTGACCCAAATGTGGCCTCTCTCAGTACAATATCAGAGTCAAATGAGGAAAGCTCTGAACAGAAACTAGATCAAGAGAGACAAAAGTGGAATGAGGTAGAGAGCAAGTGGATATCCCTTGCTGAGGAATTCAGAATGGAACTTGAGGCCAGCAGATCACTGGCCGAAAAGACAATGCAAGAATTAGAAACTGAGAAGAAATGTGCAGAAGAGCTCAAGGAAGCAATGAAACTGGCTATGGAGGGGCAATCACGGATGTTAGAACAGTATGCAGATTTGGAAGAGAAACATATGCAATTGCTTGCAAGGCATAGAATGATACGGGATGGAGTGGAGGATGTGAAGAAAGCAGCTGCTAAGGCAGGAGTCAGGGGTGCTGAGTCCAAATTCATAAATGCTATTGCTGCAGAAATTTCAGCATTGAGAGTAGAAAGAGAAAGAGAGAGGCGGTATCTTAGGGACGAAAATAAGGGGCTTCAGGCACAATTGCGGGATACTGCTGAAGCTGTGCAGGCTGCGGGCGAATTACTCGTGCGGCTCAAAGAAGCAGATGAGGCTGTTGCTACTGCTCAGAAGCAAGCTATGGAGACCAAGCAAGAAGCAGATAAGGCTTACATGAAGATTGAAAAACTGAAGAAAAAACATGAGAAAGAGATTAGCAGTCTTAATGAGCTCATTGCCGAGTCTCGTTTACCCAAAGAAGTAATTCAACCTGCTTATGACGGTTCTAATATGGCAAAATATGATGCAGGCGAGCCCCATAGTTTGAGTGATCAAAGATGGAGAGAGGAATTTGAACCATTCTACAAAGGGGAAGAGGGCGAGTTGCGAAAACTTGCCGAACCCTCATTATGGTTCTCCGGTTATGACCGATGCAACATATAG

Protein Analysis

1328

Amino Acids

147.36

Weight (kDa)

5.34

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 100 - 245 1.6e-20 Microtubule binding
Kinesin PF00225 126 - 432 8.2e-104 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010348)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 476, 2248, 3820
Acc65I GGTACC 1 cut(s) 2569
AccB1I GGYRCC 1 cut(s) 2569
AccBSI CCGCTC 1 cut(s) 906
AccI GTMKAC 2 cut(s) 1626, 3042
AccII CGCG 1 cut(s) 29
AclWI GGATC 9 cut(s) 131, 144, 731, 744, 1826, 1839, 1964, 2190, 2869
AcoI YGGCCR 1 cut(s) 3261
AcsI RAATTY 6 cut(s) 1116, 2956, 3227, 3485, 3510, 3890
AcuI CTGAAG 9 cut(s) 740, 1587, 1959, 2391, 2679, 2900, 3560, 3621, 3752
AcvI CACGTG 1 cut(s) 3101
AdeI CACNNNGTG 2 cut(s) 546, 1283
AfeI AGCGCT 1 cut(s) 1046
AhdI GACNNNNNGTC 1 cut(s) 376
AhlI ACTAGT 1 cut(s) 881
AjiI CACGTC 1 cut(s) 1615
AjnI CCWGG 6 cut(s) 86, 271, 1160, 1987, 2120, 2414
AloI GAACNNNNNNTCC 2 cut(s) 859, 891
Alw21I GWGCWC 4 cut(s) 463, 2255, 3315, 3774
Alw26I GTCTC 6 cut(s) 1247, 2103, 2859, 3172, 3680, 3789
AlwI GGATC 9 cut(s) 131, 144, 731, 744, 1826, 1839, 1964, 2190, 2869
AlwNI CAGNNNCTG 3 cut(s) 844, 1967, 2591
Ama87I CYCGRG 2 cut(s) 701, 2274
Aor51HI AGCGCT 1 cut(s) 1046
AoxI GGCC 9 cut(s) 89, 108, 190, 206, 268, 2332, 3114, 3246, 3261
ApaI GGGCCC 1 cut(s) 194
ApoI RAATTY 6 cut(s) 1116, 2956, 3227, 3485, 3510, 3890
Asp700I GAANNNNTTC 5 cut(s) 8, 874, 1884, 3006, 3804
Asp718I GGTACC 1 cut(s) 2569
AspLEI GCGC 1 cut(s) 1047
AspS9I GGNCC 7 cut(s) 190, 191, 207, 269, 551, 1893, 2151
AsuC2I CCSGG 1 cut(s) 3064
AsuHPI GGTGA 7 cut(s) 316, 793, 1366, 2109, 2431, 2891, 2993
AsuNHI GCTAGC 2 cut(s) 1472, 1793
AvaI CYCGRG 2 cut(s) 701, 2274
AvaII GGWCC 3 cut(s) 551, 1893, 2151
BaeGI GKGCMC 1 cut(s) 194
BaeI ACNNNNGTAYC 4 cut(s) 662, 695, 1725, 1758
BamHI GGATCC 3 cut(s) 136, 736, 1831
BanI GGYRCC 1 cut(s) 2569
BanII GRGCYC 5 cut(s) 194, 2255, 3315, 3774, 3858
BarI GAAGNNNNNNTAC 2 cut(s) 2873, 2905
BauI CACGAG 2 cut(s) 1652, 3629
BbrPI CACGTG 1 cut(s) 3101
BbsI GAAGAC 2 cut(s) 1857, 2679
Bbv12I GWGCWC 4 cut(s) 463, 2255, 3315, 3774
BbvCI CCTCAGC 1 cut(s) 3222
BccI CCATC 6 cut(s) 343, 1522, 2573, 2804, 3419, 3873
BceAI ACGGC 2 cut(s) 115, 2230
BcgI CGANNNNNNTGC 2 cut(s) 407, 441
BciT130I CCWGG 6 cut(s) 88, 273, 1162, 1989, 2122, 2416
BciVI GTATCC 1 cut(s) 3586
BclI TGATCA 2 cut(s) 589, 3871
BcnI CCSGG 1 cut(s) 3064
BcoDI GTCTC 6 cut(s) 1247, 2103, 2859, 3172, 3680, 3789
BcuI ACTAGT 1 cut(s) 881
BfaI CTAG 9 cut(s) 437, 467, 882, 1473, 1794, 1821, 2528, 2849, 3167
BfmI CTRYAG 3 cut(s) 1150, 3029, 3504
BfoI RGCGCY 1 cut(s) 1048
BfuAI ACCTGC 3 cut(s) 476, 2248, 3820
BfuI GTATCC 1 cut(s) 3586
BglI GCCNNNNNGGC 2 cut(s) 205, 2214
BglII AGATCT 1 cut(s) 727
BlpI GCTNAGC 2 cut(s) 239, 2254
Bme1390I CCNGG 7 cut(s) 88, 273, 1162, 1989, 2122, 2416, 3064
Bme18I GGWCC 3 cut(s) 551, 1893, 2151
BmeRI GACNNNNNGTC 1 cut(s) 376
BmeT110I CYCGRG 2 cut(s) 701, 2274
BmgBI CACGTC 1 cut(s) 1615
BmgT120I GGNCC 7 cut(s) 190, 191, 207, 269, 551, 1893, 2151
BmrFI CCNGG 7 cut(s) 88, 273, 1162, 1989, 2122, 2416, 3064
BmrI ACTGGG 5 cut(s) 1403, 1799, 1809, 2103, 2423
BmsI GCATC 6 cut(s) 415, 437, 1706, 3065, 3835, 3962
BmtI GCTAGC 2 cut(s) 1476, 1797
BmuI ACTGGG 5 cut(s) 1403, 1799, 1809, 2103, 2423
BoxI GACNNNNGTC 1 cut(s) 1586
BpiI GAAGAC 2 cut(s) 1857, 2679
BplI GAGNNNNNCTC 4 cut(s) 41, 73, 3137, 3169
Bpu10I CCTNAGC 6 cut(s) 1287, 1367, 1872, 2060, 3222, 3456
Bpu1102I GCTNAGC 2 cut(s) 239, 2254
BpuEI CTTGAG 4 cut(s) 212, 659, 3263, 3299
BpuMI CCSGG 1 cut(s) 3064
Bsa29I ATCGAT 3 cut(s) 1000, 1072, 1536
BsaAI YACGTR 3 cut(s) 818, 3040, 3101
BsaBI GATNNNNATC 4 cut(s) 576, 741, 1338, 1532
BsaI GGTCTC 1 cut(s) 3680
BsaWI WCCGGW 1 cut(s) 3959
BsaXI ACNNNNNCTCC 6 cut(s) 37, 59, 67, 89, 859, 889
Bse1I ACTGG 9 cut(s) 978, 1409, 1805, 1815, 2109, 2194, 2429, 3264, 3336
Bse3DI GCAATG 7 cut(s) 1218, 1329, 1846, 2083, 2758, 3330, 3774
Bse8I GATNNNNATC 4 cut(s) 576, 741, 1338, 1532
BseBI CCWGG 6 cut(s) 88, 273, 1162, 1989, 2122, 2416
BseCI ATCGAT 3 cut(s) 1000, 1072, 1536
BseGI GGATG 8 cut(s) 430, 577, 1378, 2815, 3050, 3360, 3430, 3442
BseJI GATNNNNATC 4 cut(s) 576, 741, 1338, 1532
BseMI GCAATG 7 cut(s) 1218, 1329, 1846, 2083, 2758, 3330, 3774
BseNI ACTGG 9 cut(s) 978, 1409, 1805, 1815, 2109, 2194, 2429, 3264, 3336
BseRI GAGGAG 4 cut(s) 659, 821, 1538, 2843
BseSI GKGCMC 1 cut(s) 194
BsgI GTGCAG 4 cut(s) 374, 1980, 3324, 3629
Bsh1236I CGCG 1 cut(s) 29
BshFI GGCC 9 cut(s) 91, 110, 192, 208, 270, 2334, 3116, 3248, 3263
BshNI GGYRCC 1 cut(s) 2569
BshVI ATCGAT 3 cut(s) 1000, 1072, 1536
BsiHKAI GWGCWC 4 cut(s) 463, 2255, 3315, 3774
BsiHKCI CYCGRG 2 cut(s) 701, 2274
BsiSI CCGG 4 cut(s) 267, 1384, 3064, 3960
BslFI GGGAC 2 cut(s) 1787, 3572
BsmAI GTCTC 6 cut(s) 1247, 2103, 2859, 3172, 3680, 3789
BsmBI CGTCTC 1 cut(s) 1247
BsmFI GGGAC 2 cut(s) 1787, 3572
BsmI GAATGC 5 cut(s) 315, 2018, 2322, 2526, 2753
BsnI GGCC 9 cut(s) 91, 110, 192, 208, 270, 2334, 3116, 3248, 3263
Bso31I GGTCTC 1 cut(s) 3680
BsoBI CYCGRG 2 cut(s) 701, 2274
Bsp120I GGGCCC 1 cut(s) 190
Bsp1286I GDGCHC 6 cut(s) 194, 463, 2255, 3315, 3774, 3858
Bsp1407I TGTACA 1 cut(s) 292
Bsp1720I GCTNAGC 2 cut(s) 239, 2254
BspANI GGCC 9 cut(s) 91, 110, 192, 208, 270, 2334, 3116, 3248, 3263
BspDI ATCGAT 3 cut(s) 1000, 1072, 1536
BspFNI CGCG 1 cut(s) 29
BspMAI CTGCAG 1 cut(s) 3508
BspMI ACCTGC 3 cut(s) 476, 2248, 3820
BspOI GCTAGC 2 cut(s) 1476, 1797
BspPI GGATC 9 cut(s) 131, 144, 731, 744, 1826, 1839, 1964, 2190, 2869
BspQI GCTCTTC 2 cut(s) 2838, 3303
BspT107I GGYRCC 1 cut(s) 2569
BspTNI GGTCTC 1 cut(s) 3680
BsrBI CCGCTC 1 cut(s) 906
BsrDI GCAATG 7 cut(s) 1218, 1329, 1846, 2083, 2758, 3330, 3774
BsrGI TGTACA 1 cut(s) 292
BsrI ACTGG 9 cut(s) 978, 1409, 1805, 1815, 2109, 2194, 2429, 3264, 3336
BssSI CACGAG 2 cut(s) 1652, 3629
BssT1I CCWWGG 3 cut(s) 95, 105, 114
Bst2BI CACGAG 2 cut(s) 1652, 3629
Bst2UI CCWGG 6 cut(s) 88, 273, 1162, 1989, 2122, 2416
Bst6I CTCTTC 6 cut(s) 2161, 2838, 2997, 3303, 3375, 3909
BstAPI GCANNNNNTGC 2 cut(s) 13, 1283
BstAUI TGTACA 1 cut(s) 292
BstBAI YACGTR 3 cut(s) 818, 3040, 3101
BstENI CCTNNNNNAGG 2 cut(s) 1977, 3221
BstF5I GGATG 8 cut(s) 430, 577, 1378, 2815, 3050, 3360, 3430, 3442
BstFNI CGCG 1 cut(s) 29
BstH2I RGCGCY 1 cut(s) 1048
BstHHI GCGC 1 cut(s) 1047
BstMAI GTCTC 6 cut(s) 1247, 2103, 2859, 3172, 3680, 3789
BstNI CCWGG 6 cut(s) 88, 273, 1162, 1989, 2122, 2416
BstNSI RCATGY 3 cut(s) 1987, 2221, 2283
BstPAI GACNNNNGTC 1 cut(s) 1586
BstSCI CCNGG 7 cut(s) 86, 271, 1160, 1987, 2120, 2414, 3062
BstSFI CTRYAG 3 cut(s) 1150, 3029, 3504
BstSLI GKGCMC 1 cut(s) 194
BstSNI TACGTA 2 cut(s) 818, 3040
BstUI CGCG 1 cut(s) 29
BstV2I GAAGAC 2 cut(s) 1857, 2679
BstX2I RGATCY 6 cut(s) 136, 727, 736, 1831, 2182, 2874
BstXI CCANNNNNNTGG 1 cut(s) 2626
BstYI RGATCY 6 cut(s) 136, 727, 736, 1831, 2182, 2874
Bsu15I ATCGAT 3 cut(s) 1000, 1072, 1536
BsuI GTATCC 1 cut(s) 3586
BsuRI GGCC 9 cut(s) 91, 110, 192, 208, 270, 2334, 3116, 3248, 3263
BsuTUI ATCGAT 3 cut(s) 1000, 1072, 1536
BtrI CACGTC 1 cut(s) 1615
BtsCI GGATG 8 cut(s) 430, 577, 1378, 2815, 3050, 3360, 3430, 3442
BtsI GCAGTG 1 cut(s) 2353
BveI ACCTGC 3 cut(s) 476, 2248, 3820
CaiI CAGNNNCTG 3 cut(s) 844, 1967, 2591
CfoI GCGC 1 cut(s) 1047
Cfr13I GGNCC 7 cut(s) 190, 191, 207, 269, 551, 1893, 2151
ClaI ATCGAT 3 cut(s) 1000, 1072, 1536
CseI GACGC 2 cut(s) 611, 1004
DraIII CACNNNGTG 2 cut(s) 546, 1283
DriI GACNNNNNGTC 1 cut(s) 376
EaeI YGGCCR 1 cut(s) 3261
Eam1104I CTCTTC 6 cut(s) 2161, 2838, 2997, 3303, 3375, 3909
Eam1105I GACNNNNNGTC 1 cut(s) 376
EarI CTCTTC 6 cut(s) 2161, 2838, 2997, 3303, 3375, 3909
EciI GGCGGA 2 cut(s) 67, 117
Ecl136II GAGCTC 3 cut(s) 2253, 3313, 3772
Eco105I TACGTA 2 cut(s) 818, 3040
Eco130I CCWWGG 3 cut(s) 95, 105, 114
Eco147I AGGCCT 1 cut(s) 110
Eco24I GRGCYC 5 cut(s) 194, 2255, 3315, 3774, 3858
Eco31I GGTCTC 1 cut(s) 3680
Eco32I GATATC 1 cut(s) 3213
Eco47I GGWCC 3 cut(s) 551, 1893, 2151
Eco47III AGCGCT 1 cut(s) 1046
Eco53kI GAGCTC 3 cut(s) 2253, 3313, 3772
Eco57I CTGAAG 9 cut(s) 740, 1587, 1959, 2391, 2679, 2900, 3560, 3621, 3752
Eco72I CACGTG 1 cut(s) 3101
Eco88I CYCGRG 2 cut(s) 701, 2274
EcoICRI GAGCTC 3 cut(s) 2253, 3313, 3772
EcoNI CCTNNNNNAGG 2 cut(s) 1977, 3221
EcoO109I RGGNCCY 3 cut(s) 190, 1893, 2151
EcoRI GAATTC 1 cut(s) 3227
EcoRII CCWGG 6 cut(s) 86, 271, 1160, 1987, 2120, 2414
EcoRV GATATC 1 cut(s) 3213
EcoT14I CCWWGG 3 cut(s) 95, 105, 114
EcoT22I ATGCAT 3 cut(s) 430, 1699, 2018
EcoT38I GRGCYC 5 cut(s) 194, 2255, 3315, 3774, 3858
ErhI CCWWGG 3 cut(s) 95, 105, 114
Esp3I CGTCTC 1 cut(s) 1247
FalI AAGNNNNNCTT 2 cut(s) 2353, 2385
FaqI GGGAC 2 cut(s) 1787, 3572
FauI CCCGC 4 cut(s) 911, 2635, 3582, 3610
FauNDI CATATG 3 cut(s) 511, 2678, 3390
FbaI TGATCA 2 cut(s) 589, 3871
FblI GTMKAC 2 cut(s) 1626, 3042
FokI GGATG 8 cut(s) 437, 584, 1385, 2822, 3037, 3367, 3437, 3449
FriOI GRGCYC 5 cut(s) 194, 2255, 3315, 3774, 3858
FspBI CTAG 9 cut(s) 437, 467, 882, 1473, 1794, 1821, 2528, 2849, 3167
GlaI GCGC 1 cut(s) 1046
HaeII RGCGCY 1 cut(s) 1048
HaeIII GGCC 9 cut(s) 91, 110, 192, 208, 270, 2334, 3116, 3248, 3263
HapII CCGG 4 cut(s) 267, 1384, 3064, 3960
HgaI GACGC 2 cut(s) 611, 1004
HhaI GCGC 1 cut(s) 1047
Hin6I GCGC 1 cut(s) 1045
HinP1I GCGC 1 cut(s) 1045
HincII GTYRAC 6 cut(s) 247, 603, 1026, 2041, 2128, 3090
HindII GTYRAC 6 cut(s) 247, 603, 1026, 2041, 2128, 3090
HpaI GTTAAC 3 cut(s) 603, 1026, 2041
HpaII CCGG 4 cut(s) 267, 1384, 3064, 3960
HphI GGTGA 7 cut(s) 316, 793, 1366, 2109, 2431, 2891, 2993
Hpy99I CGWCG 4 cut(s) 64, 136, 217, 220
HpyCH4IV ACGT 6 cut(s) 817, 1256, 1614, 2201, 3039, 3100
HpySE526I ACGT 6 cut(s) 817, 1256, 1614, 2201, 3039, 3100
HspAI GCGC 1 cut(s) 1045
KpnI GGTACC 1 cut(s) 2573
Ksp22I TGATCA 2 cut(s) 589, 3871
KspAI GTTAAC 3 cut(s) 603, 1026, 2041
LguI GCTCTTC 2 cut(s) 2838, 3303
LmnI GCTCC 6 cut(s) 49, 130, 458, 646, 1679, 2645
LweI GCATC 6 cut(s) 415, 437, 1706, 3065, 3835, 3962
MaeI CTAG 9 cut(s) 437, 467, 882, 1473, 1794, 1821, 2528, 2849, 3167
MaeII ACGT 6 cut(s) 817, 1256, 1614, 2201, 3039, 3100
MaeIII GTNAC 7 cut(s) 368, 832, 1427, 1574, 2351, 2972, 3101
MbiI CCGCTC 1 cut(s) 906
MfeI CAATTG 4 cut(s) 1584, 2564, 3395, 3584
MflI RGATCY 6 cut(s) 136, 727, 736, 1831, 2182, 2874
MhlI GDGCHC 6 cut(s) 194, 463, 2255, 3315, 3774, 3858
MmeI TCCRAC 4 cut(s) 114, 1256, 2931, 2979
Mph1103I ATGCAT 3 cut(s) 430, 1699, 2018
MroXI GAANNNNTTC 5 cut(s) 8, 874, 1884, 3006, 3804
MslI CAYNNNNRTG 2 cut(s) 1506, 1859
MspA1I CMGCKG 2 cut(s) 2303, 3452
MspI CCGG 4 cut(s) 267, 1384, 3064, 3960
MspR9I CCNGG 7 cut(s) 88, 273, 1162, 1989, 2122, 2416, 3064
MunI CAATTG 4 cut(s) 1584, 2564, 3395, 3584
Mva1269I GAATGC 5 cut(s) 315, 2018, 2322, 2526, 2753
MvaI CCWGG 6 cut(s) 88, 273, 1162, 1989, 2122, 2416
MvnI CGCG 1 cut(s) 29
NciI CCSGG 1 cut(s) 3064
NdeI CATATG 3 cut(s) 511, 2678, 3390
NheI GCTAGC 2 cut(s) 1472, 1793
NmeAIII GCCGAG 3 cut(s) 45, 184, 3805
NmuCI GTSAC 6 cut(s) 368, 832, 1427, 2351, 2972, 3101
NsiI ATGCAT 3 cut(s) 430, 1699, 2018
NspI RCATGY 3 cut(s) 1987, 2221, 2283
PaeI GCATGC 2 cut(s) 1987, 2221
PaeR7I CTCGAG 2 cut(s) 701, 2274
PasI CCCWGGG 1 cut(s) 2121
PceI AGGCCT 1 cut(s) 110
PciSI GCTCTTC 2 cut(s) 2838, 3303
PcsI WCGNNNNNNNCGW 1 cut(s) 176
PctI GAATGC 5 cut(s) 315, 2018, 2322, 2526, 2753
PdmI GAANNNNTTC 5 cut(s) 8, 874, 1884, 3006, 3804
PmaCI CACGTG 1 cut(s) 3101
PmlI CACGTG 1 cut(s) 3101
Ppu21I YACGTR 3 cut(s) 818, 3040, 3101
PpuMI RGGWCCY 2 cut(s) 1893, 2151
PshAI GACNNNNGTC 1 cut(s) 1586
Psp124BI GAGCTC 3 cut(s) 2255, 3315, 3774
Psp5II RGGWCCY 2 cut(s) 1893, 2151
Psp6I CCWGG 6 cut(s) 86, 271, 1160, 1987, 2120, 2414
PspCI CACGTG 1 cut(s) 3101
PspGI CCWGG 6 cut(s) 86, 271, 1160, 1987, 2120, 2414
PspOMI GGGCCC 1 cut(s) 190
PspPI GGNCC 7 cut(s) 190, 191, 207, 269, 551, 1893, 2151
PspPPI RGGWCCY 2 cut(s) 1893, 2151
PspXI VCTCGAGB 1 cut(s) 2274
PsrI GAACNNNNNNTAC 2 cut(s) 2073, 2105
PstI CTGCAG 1 cut(s) 3508
PstNI CAGNNNCTG 3 cut(s) 844, 1967, 2591
PsuI RGATCY 6 cut(s) 136, 727, 736, 1831, 2182, 2874
PvuII CAGCTG 2 cut(s) 2303, 3452
RseI CAYNNNNRTG 2 cut(s) 1506, 1859
SacI GAGCTC 3 cut(s) 2255, 3315, 3774
SapI GCTCTTC 2 cut(s) 2838, 3303
Sau96I GGNCC 7 cut(s) 190, 191, 207, 269, 551, 1893, 2151
ScrFI CCNGG 7 cut(s) 88, 273, 1162, 1989, 2122, 2416, 3064
SduI GDGCHC 6 cut(s) 194, 463, 2255, 3315, 3774, 3858
SfaNI GCATC 6 cut(s) 415, 437, 1706, 3065, 3835, 3962
SfcI CTRYAG 3 cut(s) 1150, 3029, 3504
Sfr274I CTCGAG 2 cut(s) 701, 2274
SinI GGWCC 3 cut(s) 551, 1893, 2151
SlaI CTCGAG 2 cut(s) 701, 2274
SmiMI CAYNNNNRTG 2 cut(s) 1506, 1859
SmlI CTYRAG 6 cut(s) 227, 674, 701, 2274, 3242, 3314
SmoI CTYRAG 6 cut(s) 227, 674, 701, 2274, 3242, 3314
SnaBI TACGTA 2 cut(s) 818, 3040
SpeI ACTAGT 1 cut(s) 881
SphI GCATGC 2 cut(s) 1987, 2221
SseBI AGGCCT 1 cut(s) 110
SspI AATATT 2 cut(s) 1885, 2923
SspMI CTAG 9 cut(s) 437, 467, 882, 1473, 1794, 1821, 2528, 2849, 3167
SstI GAGCTC 3 cut(s) 2255, 3315, 3774
StuI AGGCCT 1 cut(s) 110
StyD4I CCNGG 7 cut(s) 86, 271, 1160, 1987, 2120, 2414, 3062
StyI CCWWGG 3 cut(s) 95, 105, 114
TaiI ACGT 6 cut(s) 820, 1259, 1617, 2204, 3042, 3103
TaqI TCGA 9 cut(s) 218, 380, 702, 792, 1000, 1072, 1506, 1536, 2275
TaqII GACCGA 1 cut(s) 3984
TatI WGTACW 5 cut(s) 292, 1262, 2282, 2730, 3125
TauI GCSGC 3 cut(s) 202, 1037, 3637
TseFI GTSAC 6 cut(s) 368, 832, 1427, 2351, 2972, 3101
Tsp45I GTSAC 6 cut(s) 368, 832, 1427, 2351, 2972, 3101
TspGWI ACGGA 3 cut(s) 62, 437, 3367
VpaK11BI GGWCC 3 cut(s) 551, 1893, 2151
XagI CCTNNNNNAGG 2 cut(s) 1977, 3221
XapI RAATTY 6 cut(s) 1116, 2956, 3227, 3485, 3510, 3890
XceI RCATGY 3 cut(s) 1987, 2221, 2283
XcmI CCANNNNNNNNNTGG 2 cut(s) 565, 3256
XhoI CTCGAG 2 cut(s) 701, 2274
XmiI GTMKAC 2 cut(s) 1626, 3042
XmnI GAANNNNTTC 5 cut(s) 8, 874, 1884, 3006, 3804
XspI CTAG 9 cut(s) 437, 467, 882, 1473, 1794, 1821, 2528, 2849, 3167
Zsp2I ATGCAT 3 cut(s) 430, 1699, 2018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.