pycom14g02190

Glucosamine 6-phosphate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
1694498 .. 1694959
462 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 462 bp
ATGGCAAACAGTGAAGAACACAATTTCCAAGTTAGGAAGCTAGAACTCTCAGACAAAGGCAAGGGATTCATAGAACTACTGCAACAGCTGACCGTTTGTGATTCTGTATCCGACAAGGACTTCGAAGATCGATTTAAGGAGCTTAGTGCCCGAGCAGAGGACCATCAGGTCTTTGTAATAGAAGATCATCGCTCAGGGAAGATTGTGGCAACTGGGAGTGTGTTCATTGAAAGGAAGTTTATAAGAAACTGTGGCAAAGTCGGGCACATTGAAGACGTTGTGGTTGATGCCAATGCACGCGGGATGCAATTAGGAAAGAAGATGATTGACGCCCTTACGGATTATGCTCGCTCGCTGGGGTGTTATAAGGTGATTCTCGATTGCAGTGTTGAGAACAAAGCGTTCTATGAGAAATGTGGCTACATGCAGAAGGAGATTCAGATGGTGAAGTACTTCATCTGA

Protein Analysis

154

Amino Acids

17.53

Weight (kDa)

6.1

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 36 - 141 7.9e-19 Acetyltransferase (GNAT) family
Acetyltransf_10 PF13673 46 - 145 1e-07 Acetyltransferase (GNAT) domain
Acetyltransf_7 PF13508 54 - 142 2e-12 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 242, 366
AasI GACNNNNNNGTC 1 cut(s) 167
AccII CGCG 1 cut(s) 300
AciI CCGC 1 cut(s) 300
AcyI GRCGYC 1 cut(s) 330
AfaI GTAC 1 cut(s) 452
AfiI CCNNNNNNNGG 1 cut(s) 157
AgsI TTSAA 2 cut(s) 230, 272
AloI GAACNNNNNNTCC 2 cut(s) 9, 41
AluBI AGCT 3 cut(s) 40, 88, 142
AluI AGCT 3 cut(s) 40, 88, 142
Ama87I CYCGRG 1 cut(s) 150
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
Asp700I GAANNNNTTC 1 cut(s) 452
AspS9I GGNCC 1 cut(s) 160
AsuHPI GGTGA 2 cut(s) 382, 457
AsuII TTCGAA 1 cut(s) 123
AvaI CYCGRG 1 cut(s) 150
AvaII GGWCC 1 cut(s) 160
BaeGI GKGCMC 2 cut(s) 151, 267
BbsI GAAGAC 1 cut(s) 279
BccI CCATC 2 cut(s) 171, 436
BciVI GTATCC 1 cut(s) 118
BfaI CTAG 1 cut(s) 41
BfuI GTATCC 1 cut(s) 118
BmcAI AGTACT 1 cut(s) 452
Bme18I GGWCC 1 cut(s) 160
BmeT110I CYCGRG 1 cut(s) 150
BmgT120I GGNCC 1 cut(s) 160
BmrI ACTGGG 1 cut(s) 222
BmsI GCATC 2 cut(s) 277, 294
BmuI ACTGGG 1 cut(s) 222
BpiI GAAGAC 1 cut(s) 279
Bpu10I CCTNAGC 1 cut(s) 193
Bpu14I TTCGAA 1 cut(s) 123
Bsa29I ATCGAT 1 cut(s) 130
BsaHI GRCGYC 1 cut(s) 330
Bsc4I CCNNNNNNNGG 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 217
BseCI ATCGAT 1 cut(s) 130
BseGI GGATG 1 cut(s) 309
BseLI CCNNNNNNNGG 1 cut(s) 157
BseMII CTCAG 2 cut(s) 63, 207
BseNI ACTGG 1 cut(s) 217
BseSI GKGCMC 2 cut(s) 151, 267
BseYI CCCAGC 1 cut(s) 355
Bsh1236I CGCG 1 cut(s) 300
BshVI ATCGAT 1 cut(s) 130
BsiHKCI CYCGRG 1 cut(s) 150
BslI CCNNNNNNNGG 1 cut(s) 157
BsoBI CYCGRG 1 cut(s) 150
Bsp119I TTCGAA 1 cut(s) 123
Bsp1286I GDGCHC 2 cut(s) 151, 267
Bsp143I GATC 2 cut(s) 127, 184
BspACI CCGC 1 cut(s) 300
BspCNI CTCAG 2 cut(s) 62, 206
BspDI ATCGAT 1 cut(s) 130
BspFNI CGCG 1 cut(s) 300
BspT104I TTCGAA 1 cut(s) 123
BsrI ACTGG 1 cut(s) 217
BssMI GATC 2 cut(s) 127, 184
BssNI GRCGYC 1 cut(s) 330
Bst4CI ACNGT 3 cut(s) 11, 94, 251
BstACI GRCGYC 1 cut(s) 330
BstBI TTCGAA 1 cut(s) 123
BstC8I GCNNGC 3 cut(s) 298, 349, 353
BstDEI CTNAG 3 cut(s) 49, 143, 193
BstF5I GGATG 1 cut(s) 309
BstFNI CGCG 1 cut(s) 300
BstKTI GATC 2 cut(s) 130, 187
BstMBI GATC 2 cut(s) 127, 184
BstNSI RCATGY 1 cut(s) 427
BstSLI GKGCMC 2 cut(s) 151, 267
BstUI CGCG 1 cut(s) 300
BstV2I GAAGAC 1 cut(s) 279
Bsu15I ATCGAT 1 cut(s) 130
BsuI GTATCC 1 cut(s) 118
BsuTUI ATCGAT 1 cut(s) 130
BtgZI GCGATG 1 cut(s) 173
BtsCI GGATG 1 cut(s) 309
BtsI GCAGTG 1 cut(s) 391
BtsIMutI CAGTG 2 cut(s) 16, 391
Cac8I GCNNGC 3 cut(s) 298, 349, 353
Cfr13I GGNCC 1 cut(s) 160
ClaI ATCGAT 1 cut(s) 130
CseI GACGC 1 cut(s) 338
Csp6I GTAC 1 cut(s) 451
CviAII CATG 1 cut(s) 424
CviJI RGCY 4 cut(s) 40, 88, 142, 420
CviKI_1 RGCY 4 cut(s) 40, 88, 142, 420
CviQI GTAC 1 cut(s) 451
DdeI CTNAG 3 cut(s) 49, 143, 193
DpnI GATC 2 cut(s) 129, 186
DpnII GATC 2 cut(s) 127, 184
DrdI GACNNNNNNGTC 1 cut(s) 167
DseDI GACNNNNNNGTC 1 cut(s) 167
Eco47I GGWCC 1 cut(s) 160
Eco88I CYCGRG 1 cut(s) 150
FaeI CATG 1 cut(s) 427
FaiI YATR 6 cut(s) 71, 242, 345, 366, 408, 425
FatI CATG 1 cut(s) 423
FauI CCCGC 1 cut(s) 293
FokI GGATG 1 cut(s) 316
FspBI CTAG 1 cut(s) 41
GsaI CCCAGC 1 cut(s) 359
HgaI GACGC 1 cut(s) 338
Hin1I GRCGYC 1 cut(s) 330
Hin1II CATG 1 cut(s) 427
HinfI GANTC 4 cut(s) 66, 101, 373, 436
HphI GGTGA 2 cut(s) 382, 457
Hpy188I TCNGA 4 cut(s) 52, 112, 441, 461
Hpy188III TCNNGA 1 cut(s) 377
HpyAV CCTTC 1 cut(s) 424
HpyCH4III ACNGT 3 cut(s) 11, 94, 251
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 5 cut(s) 82, 296, 307, 384, 427
HpyF3I CTNAG 3 cut(s) 49, 143, 193
HpySE526I ACGT 1 cut(s) 276
Hsp92I GRCGYC 1 cut(s) 330
Hsp92II CATG 1 cut(s) 427
Kzo9I GATC 2 cut(s) 127, 184
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 4 cut(s) 152, 180, 198, 341
LweI GCATC 2 cut(s) 277, 294
MaeI CTAG 1 cut(s) 41
MaeII ACGT 1 cut(s) 276
MalI GATC 2 cut(s) 129, 186
MboI GATC 2 cut(s) 127, 184
MboII GAAGA 6 cut(s) 26, 137, 194, 211, 284, 331
MhlI GDGCHC 2 cut(s) 151, 267
MluCI AATT 2 cut(s) 22, 308
MmeI TCCRAC 1 cut(s) 135
MnlI CCTC 1 cut(s) 151
MroXI GAANNNNTTC 1 cut(s) 452
MseI TTAA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 88
MvnI CGCG 1 cut(s) 300
NdeII GATC 2 cut(s) 127, 184
NlaIII CATG 1 cut(s) 427
NspI RCATGY 1 cut(s) 427
NspV TTCGAA 1 cut(s) 123
PdmI GAANNNNTTC 1 cut(s) 452
PfeI GAWTC 4 cut(s) 66, 101, 373, 436
PsiI TTATAA 2 cut(s) 242, 366
PspFI CCCAGC 1 cut(s) 355
PspPI GGNCC 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 88
RsaI GTAC 1 cut(s) 452
RsaNI GTAC 1 cut(s) 451
SaqAI TTAA 1 cut(s) 135
Sau3AI GATC 2 cut(s) 127, 184
Sau96I GGNCC 1 cut(s) 160
ScaI AGTACT 1 cut(s) 452
SduI GDGCHC 2 cut(s) 151, 267
SetI ASST 6 cut(s) 42, 90, 144, 171, 279, 372
SfaNI GCATC 2 cut(s) 277, 294
SfuI TTCGAA 1 cut(s) 123
SinI GGWCC 1 cut(s) 160
Sse9I AATT 2 cut(s) 22, 308
SsiI CCGC 1 cut(s) 300
SspMI CTAG 1 cut(s) 41
TaaI ACNGT 3 cut(s) 11, 94, 251
TaiI ACGT 1 cut(s) 279
TaqI TCGA 3 cut(s) 123, 130, 378
TasI AATT 2 cut(s) 22, 308
TatI WGTACW 1 cut(s) 450
TfiI GAWTC 4 cut(s) 66, 101, 373, 436
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TscAI CASTG 2 cut(s) 16, 391
TspDTI ATGAA 3 cut(s) 58, 214, 445
TspGWI ACGGA 1 cut(s) 353
TspRI CASTG 2 cut(s) 16, 391
VpaK11BI GGWCC 1 cut(s) 160
XceI RCATGY 1 cut(s) 427
XmnI GAANNNNTTC 1 cut(s) 452
XspI CTAG 1 cut(s) 41
ZrmI AGTACT 1 cut(s) 452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.