Trafficking protein particle complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16280 AT5G16280 |
| fragaria_vesca | FvH4_6g20450 FvH4_6g20450 FvH4_6g20450 FvH4_6g20450 |
| malus_domestica | MD12G1041600.v1.1 MD14G1040700.v1.1 |
| prunus_persica | Prupe.7G093600_v2.0.a1 |
| pyrus_communis | pycom12g03630 pycom14g03450 |
| rosa_chinensis | RchiOBHm_Chr3g0476301 |
| rosa_laevigata | RLG00000023780 |
| rosa_multiflora | Rmu_sc0000114.1_g000012 |
| rosa_roxburghii | Rroxscaffold_6G00405410 |
| rosa_rugosa | Rorug03G0153400 |
| rosa_samantha | Rh3AG204600 Rh3BG236000 Rh3CG230700 Rh3DG230500 |
| rosa_wichuraiana | Rw3G018590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 744 |
| Acc16I | TGCGCA | 1 cut(s) | 2876 |
| Acc36I | ACCTGC | 4 cut(s) | 339, 877, 2794, 3523 |
| AccB1I | GGYRCC | 1 cut(s) | 1499 |
| AccI | GTMKAC | 1 cut(s) | 1514 |
| AccII | CGCG | 1 cut(s) | 3289 |
| AciI | CCGC | 8 cut(s) | 172, 217, 296, 299, 770, 1356, 1863, 3287 |
| AclWI | GGATC | 6 cut(s) | 2, 15, 1779, 3591, 3604, 3674 |
| AcuI | CTGAAG | 4 cut(s) | 185, 390, 3013, 3084 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 298, 3094 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3333 |
| AhlI | ACTAGT | 3 cut(s) | 592, 2096, 3479 |
| AjiI | CACGTC | 3 cut(s) | 163, 3522, 3819 |
| AjnI | CCWGG | 7 cut(s) | 291, 731, 1109, 1623, 2707, 3195, 3822 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3685, 3717 |
| Alw21I | GWGCWC | 3 cut(s) | 72, 326, 659 |
| Alw26I | GTCTC | 6 cut(s) | 427, 470, 1665, 2038, 3210, 3637 |
| AlwI | GGATC | 6 cut(s) | 2, 15, 1779, 3591, 3604, 3674 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 682, 2261, 3566 |
| Ama87I | CYCGRG | 3 cut(s) | 3087, 3600, 3728 |
| AoxI | GGCC | 5 cut(s) | 109, 613, 976, 2681, 3603 |
| ApeKI | GCWGC | 6 cut(s) | 893, 1310, 1601, 1796, 1799, 2699 |
| AseI | ATTAAT | 2 cut(s) | 690, 3264 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1845 |
| AspLEI | GCGC | 1 cut(s) | 2877 |
| AspS9I | GGNCC | 9 cut(s) | 565, 614, 977, 1621, 1779, 3134, 3359, 3603, 3648 |
| AsuC2I | CCSGG | 6 cut(s) | 3250, 3601, 3602, 3652, 3729, 3730 |
| AsuHPI | GGTGA | 4 cut(s) | 106, 1037, 1457, 2186 |
| AsuNHI | GCTAGC | 1 cut(s) | 3152 |
| AvaI | CYCGRG | 3 cut(s) | 3087, 3600, 3728 |
| AvaII | GGWCC | 6 cut(s) | 565, 1621, 1779, 3134, 3359, 3648 |
| AxyI | CCTNAGG | 2 cut(s) | 2643, 3270 |
| BamHI | GGATCC | 2 cut(s) | 7, 3596 |
| BanI | GGYRCC | 1 cut(s) | 1499 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1707, 1739, 2208, 2240 |
| BauI | CACGAG | 1 cut(s) | 3331 |
| BbsI | GAAGAC | 4 cut(s) | 139, 3072, 3516, 3801 |
| Bbv12I | GWGCWC | 3 cut(s) | 72, 326, 659 |
| BbvI | GCAGC | 6 cut(s) | 880, 1297, 1588, 1786, 1808, 2711 |
| BceAI | ACGGC | 3 cut(s) | 124, 2453, 2797 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2009, 2043, 2046, 2080 |
| BciT130I | CCWGG | 7 cut(s) | 293, 733, 1111, 1625, 2709, 3197, 3824 |
| BclI | TGATCA | 7 cut(s) | 184, 448, 490, 1465, 2584, 3484, 3784 |
| BcnI | CCSGG | 6 cut(s) | 3250, 3601, 3602, 3652, 3729, 3730 |
| BcoDI | GTCTC | 6 cut(s) | 427, 470, 1665, 2038, 3210, 3637 |
| BcuI | ACTAGT | 3 cut(s) | 592, 2096, 3479 |
| BfmI | CTRYAG | 3 cut(s) | 193, 1794, 3316 |
| BfuAI | ACCTGC | 4 cut(s) | 339, 877, 2794, 3523 |
| BglII | AGATCT | 1 cut(s) | 307 |
| BisI | GCNGC | 8 cut(s) | 297, 770, 894, 1311, 1602, 1797, 1800, 2700 |
| BlsI | GCNGC | 8 cut(s) | 298, 771, 895, 1312, 1603, 1798, 1801, 2701 |
| BmcAI | AGTACT | 2 cut(s) | 3322, 3478 |
| Bme18I | GGWCC | 6 cut(s) | 565, 1621, 1779, 3134, 3359, 3648 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3333 |
| BmeT110I | CYCGRG | 3 cut(s) | 3087, 3600, 3728 |
| BmgBI | CACGTC | 3 cut(s) | 163, 3522, 3819 |
| BmgT120I | GGNCC | 9 cut(s) | 565, 614, 977, 1621, 1779, 3134, 3359, 3603, 3648 |
| BmiI | GGNNCC | 8 cut(s) | 9, 567, 917, 1344, 1501, 1532, 2942, 3598 |
| BmrI | ACTGGG | 1 cut(s) | 966 |
| BmsI | GCATC | 9 cut(s) | 810, 1171, 1796, 2044, 2344, 2449, 2965, 3455, 3487 |
| BmtI | GCTAGC | 1 cut(s) | 3156 |
| BmuI | ACTGGG | 1 cut(s) | 966 |
| BpiI | GAAGAC | 4 cut(s) | 139, 3072, 3516, 3801 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3617, 3649 |
| BpmI | CTGGAG | 3 cut(s) | 3457, 3489, 3836 |
| BpuEI | CTTGAG | 6 cut(s) | 86, 116, 684, 1388, 2408, 3020 |
| BpuMI | CCSGG | 6 cut(s) | 3250, 3601, 3602, 3652, 3729, 3730 |
| BsaAI | YACGTR | 3 cut(s) | 984, 1046, 1527 |
| BsaBI | GATNNNNATC | 1 cut(s) | 306 |
| BsaJI | CCNNGG | 9 cut(s) | 731, 732, 2708, 3465, 3592, 3600, 3621, 3728, 3823 |
| BsaWI | WCCGGW | 1 cut(s) | 3226 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1334, 1364, 1932, 1962, 2188, 2218 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 298, 3094 |
| Bse1I | ACTGG | 7 cut(s) | 972, 1168, 3474, 3506, 3560, 3606, 3853 |
| Bse21I | CCTNAGG | 2 cut(s) | 2643, 3270 |
| Bse3DI | GCAATG | 1 cut(s) | 567 |
| Bse8I | GATNNNNATC | 1 cut(s) | 306 |
| BseBI | CCWGG | 7 cut(s) | 293, 733, 1111, 1625, 2709, 3197, 3824 |
| BseDI | CCNNGG | 9 cut(s) | 731, 732, 2708, 3465, 3592, 3600, 3621, 3728, 3823 |
| BseJI | GATNNNNATC | 1 cut(s) | 306 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 298, 3094 |
| BseMI | GCAATG | 1 cut(s) | 567 |
| BseMII | CTCAG | 8 cut(s) | 339, 350, 1658, 2049, 2634, 3134, 3261, 3270 |
| BseNI | ACTGG | 7 cut(s) | 972, 1168, 3474, 3506, 3560, 3606, 3853 |
| BseRI | GAGGAG | 4 cut(s) | 667, 1355, 1850, 3150 |
| BseXI | GCAGC | 6 cut(s) | 880, 1297, 1588, 1786, 1808, 2711 |
| Bsh1236I | CGCG | 1 cut(s) | 3289 |
| BshFI | GGCC | 5 cut(s) | 111, 615, 978, 2683, 3605 |
| BshNI | GGYRCC | 1 cut(s) | 1499 |
| BsiHKAI | GWGCWC | 3 cut(s) | 72, 326, 659 |
| BsiHKCI | CYCGRG | 3 cut(s) | 3087, 3600, 3728 |
| BsiSI | CCGG | 7 cut(s) | 11, 1733, 3227, 3250, 3601, 3651, 3729 |
| BsiWI | CGTACG | 1 cut(s) | 74 |
| BslFI | GGGAC | 2 cut(s) | 3745, 3829 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 298, 3094 |
| BsmAI | GTCTC | 6 cut(s) | 427, 470, 1665, 2038, 3210, 3637 |
| BsmBI | CGTCTC | 2 cut(s) | 427, 3637 |
| BsmFI | GGGAC | 2 cut(s) | 3745, 3829 |
| BsmI | GAATGC | 1 cut(s) | 39 |
| BsnI | GGCC | 5 cut(s) | 111, 615, 978, 2683, 3605 |
| BsoBI | CYCGRG | 3 cut(s) | 3087, 3600, 3728 |
| Bsp1286I | GDGCHC | 3 cut(s) | 72, 326, 659 |
| Bsp1407I | TGTACA | 2 cut(s) | 412, 2724 |
| BspACI | CCGC | 8 cut(s) | 172, 217, 296, 299, 770, 1356, 1863, 3287 |
| BspANI | GGCC | 5 cut(s) | 111, 615, 978, 2683, 3605 |
| BspCNI | CTCAG | 8 cut(s) | 338, 349, 1659, 2048, 2635, 3133, 3262, 3271 |
| BspFNI | CGCG | 1 cut(s) | 3289 |
| BspLI | GGNNCC | 8 cut(s) | 9, 567, 917, 1344, 1501, 1532, 2942, 3598 |
| BspMAI | CTGCAG | 2 cut(s) | 1798, 3320 |
| BspMI | ACCTGC | 4 cut(s) | 339, 877, 2794, 3523 |
| BspOI | GCTAGC | 1 cut(s) | 3156 |
| BspPI | GGATC | 6 cut(s) | 2, 15, 1779, 3591, 3604, 3674 |
| BspQI | GCTCTTC | 1 cut(s) | 1584 |
| BspT107I | GGYRCC | 1 cut(s) | 1499 |
| BsrDI | GCAATG | 1 cut(s) | 567 |
| BsrGI | TGTACA | 2 cut(s) | 412, 2724 |
| BsrI | ACTGG | 7 cut(s) | 972, 1168, 3474, 3506, 3560, 3606, 3853 |
| BssECI | CCNNGG | 9 cut(s) | 731, 732, 2708, 3465, 3592, 3600, 3621, 3728, 3823 |
| BssNAI | GTATAC | 1 cut(s) | 1515 |
| BssSI | CACGAG | 1 cut(s) | 3331 |
| BssT1I | CCWWGG | 1 cut(s) | 3592 |
| Bst1107I | GTATAC | 1 cut(s) | 1515 |
| Bst2BI | CACGAG | 1 cut(s) | 3331 |
| Bst2UI | CCWGG | 7 cut(s) | 293, 733, 1111, 1625, 2709, 3197, 3824 |
| Bst4CI | ACNGT | 9 cut(s) | 674, 684, 1318, 1350, 1451, 1569, 2200, 3192, 3847 |
| Bst6I | CTCTTC | 3 cut(s) | 39, 1584, 3711 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1793, 2809 |
| BstAUI | TGTACA | 2 cut(s) | 412, 2724 |
| BstBAI | YACGTR | 3 cut(s) | 984, 1046, 1527 |
| BstC8I | GCNNGC | 9 cut(s) | 97, 1126, 1149, 1241, 1374, 2021, 2563, 2789, 3154 |
| BstDSI | CCRYGG | 1 cut(s) | 3621 |
| BstEII | GGTNACC | 1 cut(s) | 1445 |
| BstFNI | CGCG | 1 cut(s) | 3289 |
| BstHHI | GCGC | 1 cut(s) | 2877 |
| BstMAI | GTCTC | 6 cut(s) | 427, 470, 1665, 2038, 3210, 3637 |
| BstNI | CCWGG | 7 cut(s) | 293, 733, 1111, 1625, 2709, 3197, 3824 |
| BstNSI | RCATGY | 5 cut(s) | 465, 1481, 2603, 2791, 3312 |
| BstPI | GGTNACC | 1 cut(s) | 1445 |
| BstSFI | CTRYAG | 3 cut(s) | 193, 1794, 3316 |
| BstSNI | TACGTA | 1 cut(s) | 984 |
| BstUI | CGCG | 1 cut(s) | 3289 |
| BstV1I | GCAGC | 6 cut(s) | 880, 1297, 1588, 1786, 1808, 2711 |
| BstV2I | GAAGAC | 4 cut(s) | 139, 3072, 3516, 3801 |
| BstX2I | RGATCY | 3 cut(s) | 7, 307, 3596 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2679, 3645 |
| BstYI | RGATCY | 3 cut(s) | 7, 307, 3596 |
| BstZ17I | GTATAC | 1 cut(s) | 1515 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2643, 3270 |
| BsuRI | GGCC | 5 cut(s) | 111, 615, 978, 2683, 3605 |
| BtgI | CCRYGG | 1 cut(s) | 3621 |
| BtrI | CACGTC | 3 cut(s) | 163, 3522, 3819 |
| BtsI | GCAGTG | 1 cut(s) | 3313 |
| BtsIMutI | CAGTG | 5 cut(s) | 979, 1346, 1574, 3313, 3567 |
| BveI | ACCTGC | 4 cut(s) | 339, 877, 2794, 3523 |
| Cac8I | GCNNGC | 9 cut(s) | 97, 1126, 1149, 1241, 1374, 2021, 2563, 2789, 3154 |
| CaiI | CAGNNNCTG | 3 cut(s) | 682, 2261, 3566 |
| CfoI | GCGC | 1 cut(s) | 2877 |
| Cfr13I | GGNCC | 9 cut(s) | 565, 614, 977, 1621, 1779, 3134, 3359, 3603, 3648 |
| Cfr9I | CCCGGG | 2 cut(s) | 3600, 3728 |
| CseI | GACGC | 5 cut(s) | 133, 409, 1365, 3278, 3619 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1392, 1427, 3025, 3060, 3603, 3638 |
| DraI | TTTAAA | 3 cut(s) | 1221, 2355, 3207 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3333 |
| Eam1104I | CTCTTC | 3 cut(s) | 39, 1584, 3711 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3333 |
| EarI | CTCTTC | 3 cut(s) | 39, 1584, 3711 |
| EciI | GGCGGA | 1 cut(s) | 314 |
| Eco105I | TACGTA | 1 cut(s) | 984 |
| Eco130I | CCWWGG | 1 cut(s) | 3592 |
| Eco32I | GATATC | 1 cut(s) | 3830 |
| Eco47I | GGWCC | 6 cut(s) | 565, 1621, 1779, 3134, 3359, 3648 |
| Eco57I | CTGAAG | 4 cut(s) | 185, 390, 3013, 3084 |
| Eco81I | CCTNAGG | 2 cut(s) | 2643, 3270 |
| Eco88I | CYCGRG | 3 cut(s) | 3087, 3600, 3728 |
| Eco91I | GGTNACC | 1 cut(s) | 1445 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1621 |
| EcoO65I | GGTNACC | 1 cut(s) | 1445 |
| EcoRII | CCWGG | 7 cut(s) | 291, 731, 1109, 1623, 2707, 3195, 3822 |
| EcoRV | GATATC | 1 cut(s) | 3830 |
| EcoT14I | CCWWGG | 1 cut(s) | 3592 |
| EcoT22I | ATGCAT | 4 cut(s) | 352, 1789, 2793, 3310 |
| ErhI | CCWWGG | 1 cut(s) | 3592 |
| Esp3I | CGTCTC | 2 cut(s) | 427, 3637 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2853, 2885 |
| FaqI | GGGAC | 2 cut(s) | 3745, 3829 |
| FbaI | TGATCA | 7 cut(s) | 184, 448, 490, 1465, 2584, 3484, 3784 |
| FblI | GTMKAC | 1 cut(s) | 1514 |
| Fnu4HI | GCNGC | 8 cut(s) | 297, 770, 894, 1311, 1602, 1797, 1800, 2700 |
| Fsp4HI | GCNGC | 8 cut(s) | 297, 770, 894, 1311, 1602, 1797, 1800, 2700 |
| FspAI | RTGCGCAY | 1 cut(s) | 2876 |
| FspI | TGCGCA | 1 cut(s) | 2876 |
| GlaI | GCGC | 1 cut(s) | 2876 |
| GluI | GCNGC | 8 cut(s) | 297, 770, 894, 1311, 1602, 1797, 1800, 2700 |
| GsuI | CTGGAG | 3 cut(s) | 3457, 3489, 3836 |
| HaeIII | GGCC | 5 cut(s) | 111, 615, 978, 2683, 3605 |
| HapII | CCGG | 7 cut(s) | 11, 1733, 3227, 3250, 3601, 3651, 3729 |
| HgaI | GACGC | 5 cut(s) | 133, 409, 1365, 3278, 3619 |
| HhaI | GCGC | 1 cut(s) | 2877 |
| Hin6I | GCGC | 1 cut(s) | 2875 |
| HinP1I | GCGC | 1 cut(s) | 2875 |
| HincII | GTYRAC | 3 cut(s) | 514, 2890, 3232 |
| HindII | GTYRAC | 3 cut(s) | 514, 2890, 3232 |
| HindIII | AAGCTT | 5 cut(s) | 441, 1097, 1721, 1895, 2384 |
| HpaII | CCGG | 7 cut(s) | 11, 1733, 3227, 3250, 3601, 3651, 3729 |
| HphI | GGTGA | 4 cut(s) | 106, 1037, 1457, 2186 |
| Hpy99I | CGWCG | 2 cut(s) | 89, 164 |
| HpyCH4III | ACNGT | 9 cut(s) | 674, 684, 1318, 1350, 1451, 1569, 2200, 3192, 3847 |
| HpyCH4IV | ACGT | 8 cut(s) | 162, 871, 983, 1045, 1526, 3139, 3521, 3818 |
| HpySE526I | ACGT | 8 cut(s) | 162, 871, 983, 1045, 1526, 3139, 3521, 3818 |
| HspAI | GCGC | 1 cut(s) | 2875 |
| Ksp22I | TGATCA | 7 cut(s) | 184, 448, 490, 1465, 2584, 3484, 3784 |
| LguI | GCTCTTC | 1 cut(s) | 1584 |
| LmnI | GCTCC | 6 cut(s) | 75, 654, 859, 1001, 1342, 1530 |
| Lsp1109I | GCAGC | 6 cut(s) | 880, 1297, 1588, 1786, 1808, 2711 |
| LweI | GCATC | 9 cut(s) | 810, 1171, 1796, 2044, 2344, 2449, 2965, 3455, 3487 |
| MaeII | ACGT | 8 cut(s) | 162, 871, 983, 1045, 1526, 3139, 3521, 3818 |
| MaeIII | GTNAC | 9 cut(s) | 678, 1385, 1445, 1451, 1884, 2200, 3311, 3562, 3577 |
| MfeI | CAATTG | 2 cut(s) | 1727, 2181 |
| MflI | RGATCY | 3 cut(s) | 7, 307, 3596 |
| MhlI | GDGCHC | 3 cut(s) | 72, 326, 659 |
| MlyI | GAGTC | 5 cut(s) | 1928, 3049, 3343, 3464, 3678 |
| MmeI | TCCRAC | 4 cut(s) | 213, 1860, 2430, 3837 |
| Mph1103I | ATGCAT | 4 cut(s) | 352, 1789, 2793, 3310 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1845 |
| MslI | CAYNNNNRTG | 8 cut(s) | 161, 1419, 1508, 2112, 2677, 3019, 3492, 3575 |
| MspA1I | CMGCKG | 3 cut(s) | 1358, 1799, 2702 |
| MspI | CCGG | 7 cut(s) | 11, 1733, 3227, 3250, 3601, 3651, 3729 |
| MunI | CAATTG | 2 cut(s) | 1727, 2181 |
| Mva1269I | GAATGC | 1 cut(s) | 39 |
| MvaI | CCWGG | 7 cut(s) | 293, 733, 1111, 1625, 2709, 3197, 3824 |
| MvnI | CGCG | 1 cut(s) | 3289 |
| NciI | CCSGG | 6 cut(s) | 3250, 3601, 3602, 3652, 3729, 3730 |
| NheI | GCTAGC | 1 cut(s) | 3152 |
| NlaIV | GGNNCC | 8 cut(s) | 9, 567, 917, 1344, 1501, 1532, 2942, 3598 |
| NmuCI | GTSAC | 4 cut(s) | 1445, 3311, 3562, 3577 |
| NsbI | TGCGCA | 1 cut(s) | 2876 |
| NsiI | ATGCAT | 4 cut(s) | 352, 1789, 2793, 3310 |
| NspI | RCATGY | 5 cut(s) | 465, 1481, 2603, 2791, 3312 |
| PaeI | GCATGC | 1 cut(s) | 2791 |
| PasI | CCCWGGG | 1 cut(s) | 732 |
| PciSI | GCTCTTC | 1 cut(s) | 1584 |
| PctI | GAATGC | 1 cut(s) | 39 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1845 |
| Pfl23II | CGTACG | 1 cut(s) | 74 |
| PkrI | GCNGC | 8 cut(s) | 298, 771, 895, 1312, 1603, 1798, 1801, 2701 |
| PleI | GAGTC | 5 cut(s) | 1927, 3048, 3342, 3464, 3677 |
| PpsI | GAGTC | 5 cut(s) | 1927, 3048, 3342, 3464, 3677 |
| Ppu21I | YACGTR | 3 cut(s) | 984, 1046, 1527 |
| PpuMI | RGGWCCY | 1 cut(s) | 1621 |
| PshBI | ATTAAT | 2 cut(s) | 690, 3264 |
| PsiI | TTATAA | 1 cut(s) | 744 |
| Psp5II | RGGWCCY | 1 cut(s) | 1621 |
| Psp6I | CCWGG | 7 cut(s) | 291, 731, 1109, 1623, 2707, 3195, 3822 |
| PspEI | GGTNACC | 1 cut(s) | 1445 |
| PspGI | CCWGG | 7 cut(s) | 291, 731, 1109, 1623, 2707, 3195, 3822 |
| PspLI | CGTACG | 1 cut(s) | 74 |
| PspN4I | GGNNCC | 8 cut(s) | 9, 567, 917, 1344, 1501, 1532, 2942, 3598 |
| PspPI | GGNCC | 9 cut(s) | 565, 614, 977, 1621, 1779, 3134, 3359, 3603, 3648 |
| PspPPI | RGGWCCY | 1 cut(s) | 1621 |
| PstI | CTGCAG | 2 cut(s) | 1798, 3320 |
| PstNI | CAGNNNCTG | 3 cut(s) | 682, 2261, 3566 |
| PsuI | RGATCY | 3 cut(s) | 7, 307, 3596 |
| PvuII | CAGCTG | 2 cut(s) | 1799, 2702 |
| RseI | CAYNNNNRTG | 8 cut(s) | 161, 1419, 1508, 2112, 2677, 3019, 3492, 3575 |
| SapI | GCTCTTC | 1 cut(s) | 1584 |
| SatI | GCNGC | 8 cut(s) | 297, 770, 894, 1311, 1602, 1797, 1800, 2700 |
| Sau96I | GGNCC | 9 cut(s) | 565, 614, 977, 1621, 1779, 3134, 3359, 3603, 3648 |
| ScaI | AGTACT | 2 cut(s) | 3322, 3478 |
| SchI | GAGTC | 5 cut(s) | 1928, 3049, 3343, 3464, 3678 |
| SduI | GDGCHC | 3 cut(s) | 72, 326, 659 |
| SfaNI | GCATC | 9 cut(s) | 810, 1171, 1796, 2044, 2344, 2449, 2965, 3455, 3487 |
| SfcI | CTRYAG | 3 cut(s) | 193, 1794, 3316 |
| SinI | GGWCC | 6 cut(s) | 565, 1621, 1779, 3134, 3359, 3648 |
| SmaI | CCCGGG | 2 cut(s) | 3602, 3730 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 161, 1419, 1508, 2112, 2677, 3019, 3492, 3575 |
| SmlI | CTYRAG | 6 cut(s) | 101, 131, 699, 1367, 2387, 3035 |
| SmoI | CTYRAG | 6 cut(s) | 101, 131, 699, 1367, 2387, 3035 |
| SnaBI | TACGTA | 1 cut(s) | 984 |
| SpeI | ACTAGT | 3 cut(s) | 592, 2096, 3479 |
| SphI | GCATGC | 1 cut(s) | 2791 |
| SsiI | CCGC | 8 cut(s) | 172, 217, 296, 299, 770, 1356, 1863, 3287 |
| SspI | AATATT | 2 cut(s) | 790, 1744 |
| StyI | CCWWGG | 1 cut(s) | 3592 |
| TaaI | ACNGT | 9 cut(s) | 674, 684, 1318, 1350, 1451, 1569, 2200, 3192, 3847 |
| TaiI | ACGT | 8 cut(s) | 165, 874, 986, 1048, 1529, 3142, 3524, 3821 |
| TaqI | TCGA | 5 cut(s) | 87, 159, 1067, 3364, 3746 |
| TatI | WGTACW | 6 cut(s) | 412, 1911, 2724, 3320, 3476, 3847 |
| TauI | GCSGC | 2 cut(s) | 299, 772 |
| TscAI | CASTG | 5 cut(s) | 979, 1353, 1574, 3320, 3567 |
| TseFI | GTSAC | 4 cut(s) | 1445, 3311, 3562, 3577 |
| TseI | GCWGC | 6 cut(s) | 893, 1310, 1601, 1796, 1799, 2699 |
| Tsp45I | GTSAC | 4 cut(s) | 1445, 3311, 3562, 3577 |
| TspGWI | ACGGA | 6 cut(s) | 62, 1316, 1352, 1965, 3372, 3822 |
| TspMI | CCCGGG | 2 cut(s) | 3600, 3728 |
| TspRI | CASTG | 5 cut(s) | 979, 1353, 1574, 3320, 3567 |
| VpaK11BI | GGWCC | 6 cut(s) | 565, 1621, 1779, 3134, 3359, 3648 |
| VspI | ATTAAT | 2 cut(s) | 690, 3264 |
| XbaI | TCTAGA | 1 cut(s) | 1397 |
| XceI | RCATGY | 5 cut(s) | 465, 1481, 2603, 2791, 3312 |
| XmaI | CCCGGG | 2 cut(s) | 3600, 3728 |
| XmiI | GTMKAC | 1 cut(s) | 1514 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1845 |
| ZrmI | AGTACT | 2 cut(s) | 3322, 3478 |
| Zsp2I | ATGCAT | 4 cut(s) | 352, 1789, 2793, 3310 |