pycom14g07480

Periodic tryptophan protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0007129
Physical Location & Seq
Forward (+)
7649933 .. 7654393
4461 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1404 bp
ATGATATCAGCAATTTCGTGGGTGCCCAAAGGGGTTTCGAAGCCGGTTCCCTCCGTCGCCGACCCGCCCACCAAAGAGGAAATCGAAGAGCTGATTAAAACCGGCGCCTTGGAGAAAAGTGGAGATGCTGAAAGTGAGGACGATGATGGAGAAATGGATGTTGAAATCCCCAAGCAGGGTGATCAAGTCTCCCAAGCATTAGAGGTGGCAAAAGCACTCGGAAGAGCTCCTAAAGTTACGGAGCCAGGGGCCAAATTTGATGACATAGCCGATGGATTGAGGGAACTTGACATGGAACATTATGACGACGAGGATGATGGCATTGATGTGTTTAGTAGTGGGGTTGGGGACCTTTACTACCCAAGTAACGATATGGATCCATATCTAAAGAAGGAAAAGGATGATCAGATATGGCTGTATGTTGAATCAAAAGATGGTGAAGCAGATGTTTTTGTTCACCATGATGTCATCCTTTCATCATTTCCCCTTTGCACAGCATGGCTTGATTGTCCTCTCAAAGGTGGAGACAAAGGAAACTTCATTGCGGTTGGTTTAATGGATGAACCTTCCATTGAGATATGGGATCTTGACATTATTGATGAAGTGCAACCATGCGTGATATTGGGTGGTATTGCTGAGAAGAAAAAAAAGAAAGGAAAGAAGGTATCAATCAAATACAAAGAAGACAGTCACAGAGATTCAGTTCTCGGGCTTGCTTGGAATAAGGAGTACAGAAATATACTTGCTAGTGCAAGTGCTGACAAACAAGTTAAGATTTGGGATGTGGCTACTGGAAAATGTAATATTACCATGGAGCACCATACAGACAAGGTTCAGGCAGTTGCATGGAATCATTTTGCCCCGCAAGTTCTTCTCAGTGGTTCTTTTGATCATACAAAAGATGGGAGGGTGCCATCACATTCCGGGTATAAGTGGACAGTCACAGCTGATGTAGAAAGCTTAGCATGGGATCCACACACTGAGCATTCATTTGTGGTGAGCCTAGAAGACGGCACAATCAAAGGTTTTGATATTCGGGCTGCCACATCTGCTCCTACTTCCGAGTCTAAACCGAGTTTTACTCTTCATGCTCATGACAAAGCTGTATGCTCAATCTCATATAACCCTGCAGCACCGAATCTTCTTGCAACTGGATCCACAGATAAAATGGTAAAGCTTTGGGATTTGTCAAACAACCAACCTTCATGCATTTCATCCAGGAATCCTAAAGCAGGAGCTGTCTTTTCTATTTCGTTTGCAGAAGATAACCCTTTTTTGCTGGCCATAGGAGGCTCAAAAGGGAAACTGGAAGTATGGGATACAACGTATGATGCTGCGGTTGCCCAAAGATTTGGGAGTTACTACAAGAAGAGCAGAACCCAAGCTGGACCTTCATCCGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001933 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005794 GO:0006325 GO:0006355 GO:0006356 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010605 GO:0010628 GO:0010646 GO:0012505 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032269 GO:0033135 GO:0033137 GO:0033139 GO:0033140 GO:0034770 GO:0034773 GO:0034968 GO:0035064 GO:0036211 GO:0042325 GO:0042326 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045893 GO:0045935 GO:0045936 GO:0045943 GO:0046425 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051172 GO:0051173 GO:0051174 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0140030 GO:0140034 GO:1901564 GO:1901836 GO:1901838 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1904892 GO:1990889 GO:2000112 GO:2000736 GO:2000738 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

468

Amino Acids

51.01

Weight (kDa)

4.85

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_CAF1B_HIR1 PF24105 177 - 298 1.9e-07 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 222 - 297 1.2e-12 CDC20/Fizzy WD40 domain
WD40_MABP1-WDR62_2nd PF24782 229 - 431 1.7e-06 MABP1/WDR62 second WD40 domain
Beta-prop_WDR5 PF25175 229 - 298 3.3e-13 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 229 - 298 4.6e-10 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 231 - 440 1.2e-19 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 274 - 355 1.7e-06 THOC3 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 279 - 450 6.1e-07 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 315 - 443 2e-10 WDR3 first beta-propeller domain
Beta-prop_RIG_2nd PF23775 315 - 415 2.7e-07 RIG second beta-propeller
WD40_WDHD1_1st PF24817 315 - 448 2.5e-07 WDHD1 first WD40 domain
WD40_Gbeta PF25391 315 - 442 4.1e-06 G protein beta WD-40 repeat protein
WD40_CDC20-Fz PF24807 315 - 446 3.2e-16 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 316 - 443 9.2e-12 WDR5 beta-propeller domain
Beta-prop_EIPR1 PF23609 318 - 394 1.9e-09 EIPR1 beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 337 - 440 3.4e-06 WDR36/Utp21 first beta-propeller
WD40 PF00400 357 - 395 5.4e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 22, 104, 910
AciI CCGC 4 cut(s) 65, 545, 863, 1337
AclWI GGATC 7 cut(s) 371, 384, 591, 965, 978, 1149, 1162
AcoI YGGCCR 1 cut(s) 1281
AcsI RAATTY 1 cut(s) 254
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 1 cut(s) 731
AfiI CCNNNNNNNGG 5 cut(s) 175, 176, 518, 1232, 1397
AgsI TTSAA 2 cut(s) 164, 425
AjnI CCWGG 2 cut(s) 244, 1217
AluBI AGCT 8 cut(s) 91, 227, 947, 960, 1103, 1177, 1238, 1385
AluI AGCT 8 cut(s) 91, 227, 947, 960, 1103, 1177, 1238, 1385
Alw21I GWGCWC 2 cut(s) 229, 819
Alw26I GTCTC 2 cut(s) 193, 519
AlwI GGATC 7 cut(s) 371, 384, 591, 965, 978, 1149, 1162
AlwNI CAGNNNCTG 1 cut(s) 1238
Ama87I CYCGRG 1 cut(s) 707
AoxI GGCC 2 cut(s) 249, 1281
ApeKI GCWGC 3 cut(s) 1040, 1130, 1334
ApoI RAATTY 1 cut(s) 254
AspLEI GCGC 1 cut(s) 107
AspS9I GGNCC 3 cut(s) 249, 349, 1388
AsuC2I CCSGG 1 cut(s) 925
AsuHPI GGTGA 4 cut(s) 191, 449, 449, 1009
AsuII TTCGAA 1 cut(s) 38
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 2 cut(s) 349, 1388
BaeGI GKGCMC 1 cut(s) 27
BalI TGGCCA 1 cut(s) 1283
BamHI GGATCC 3 cut(s) 376, 970, 1154
BanI GGYRCC 3 cut(s) 22, 104, 910
BanII GRGCYC 1 cut(s) 229
BbsI GAAGAC 2 cut(s) 690, 1014
Bbv12I GWGCWC 2 cut(s) 229, 819
BbvI GCAGC 3 cut(s) 1027, 1142, 1321
BccI CCATC 6 cut(s) 140, 266, 311, 428, 896, 922
BceAI ACGGC 1 cut(s) 1027
BciT130I CCWGG 2 cut(s) 246, 1219
BciVI GTATCC 1 cut(s) 1312
BclI TGATCA 3 cut(s) 181, 403, 889
BcnI CCSGG 1 cut(s) 925
BcoDI GTCTC 2 cut(s) 193, 519
BfaI CTAG 2 cut(s) 747, 1004
BfmI CTRYAG 1 cut(s) 1128
BfoI RGCGCY 1 cut(s) 108
BfuI GTATCC 1 cut(s) 1312
BisI GCNGC 3 cut(s) 1041, 1131, 1335
BlpI GCTNAGC 1 cut(s) 961
BlsI GCNGC 3 cut(s) 1042, 1132, 1336
Bme1390I CCNGG 3 cut(s) 246, 925, 1219
Bme18I GGWCC 2 cut(s) 349, 1388
BmeT110I CYCGRG 1 cut(s) 707
BmgT120I GGNCC 3 cut(s) 249, 349, 1388
BmrFI CCNGG 3 cut(s) 246, 925, 1219
BmsI GCATC 2 cut(s) 115, 1321
BpiI GAAGAC 2 cut(s) 690, 1014
BplI GAGNNNNNCTC 2 cut(s) 1066, 1098
Bpu1102I GCTNAGC 1 cut(s) 961
Bpu14I TTCGAA 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 925
BsaBI GATNNNNATC 2 cut(s) 375, 381
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 3 cut(s) 108, 245, 810
BsaWI WCCGGW 1 cut(s) 1397
BsaXI ACNNNNNCTCC 2 cut(s) 1036, 1066
Bsc4I CCNNNNNNNGG 5 cut(s) 175, 176, 518, 1232, 1397
Bse118I RCCGGY 2 cut(s) 43, 101
Bse1I ACTGG 3 cut(s) 796, 1156, 1311
Bse3DI GCAATG 1 cut(s) 540
Bse8I GATNNNNATC 2 cut(s) 375, 381
BseBI CCWGG 2 cut(s) 246, 1219
BseDI CCNNGG 3 cut(s) 108, 245, 810
BseGI GGATG 8 cut(s) 163, 319, 406, 468, 565, 787, 1214, 1394
BseJI GATNNNNATC 2 cut(s) 375, 381
BseLI CCNNNNNNNGG 5 cut(s) 175, 176, 518, 1232, 1397
BseMI GCAATG 1 cut(s) 540
BseMII CTCAG 3 cut(s) 627, 889, 972
BseNI ACTGG 3 cut(s) 796, 1156, 1311
BseSI GKGCMC 1 cut(s) 27
BseXI GCAGC 3 cut(s) 1027, 1142, 1321
BshFI GGCC 2 cut(s) 251, 1283
BshNI GGYRCC 3 cut(s) 22, 104, 910
BsiHKAI GWGCWC 2 cut(s) 229, 819
BsiHKCI CYCGRG 1 cut(s) 707
BsiSI CCGG 4 cut(s) 44, 102, 924, 1398
BslFI GGGAC 1 cut(s) 362
BslI CCNNNNNNNGG 5 cut(s) 175, 176, 518, 1232, 1397
BsmAI GTCTC 2 cut(s) 193, 519
BsmFI GGGAC 1 cut(s) 362
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 2 cut(s) 251, 1283
BsoBI CYCGRG 1 cut(s) 707
Bsp119I TTCGAA 1 cut(s) 38
Bsp1286I GDGCHC 3 cut(s) 27, 229, 819
Bsp143I GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
Bsp1720I GCTNAGC 1 cut(s) 961
Bsp19I CCATGG 1 cut(s) 810
BspACI CCGC 4 cut(s) 65, 545, 863, 1337
BspANI GGCC 2 cut(s) 251, 1283
BspCNI CTCAG 3 cut(s) 628, 888, 973
BspHI TCATGA 1 cut(s) 1093
BspMAI CTGCAG 1 cut(s) 1132
BspPI GGATC 7 cut(s) 371, 384, 591, 965, 978, 1149, 1162
BspQI GCTCTTC 3 cut(s) 81, 217, 1364
BspT104I TTCGAA 1 cut(s) 38
BspT107I GGYRCC 3 cut(s) 22, 104, 910
BsrDI GCAATG 1 cut(s) 540
BsrFI RCCGGY 2 cut(s) 43, 101
BsrI ACTGG 3 cut(s) 796, 1156, 1311
BssAI RCCGGY 2 cut(s) 43, 101
BssECI CCNNGG 3 cut(s) 108, 245, 810
BssMI GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 2 cut(s) 108, 810
Bst2UI CCWGG 2 cut(s) 246, 1219
Bst4CI ACNGT 2 cut(s) 689, 940
Bst6I CTCTTC 4 cut(s) 81, 217, 1089, 1364
BstACI GRCGYC 1 cut(s) 105
BstBI TTCGAA 1 cut(s) 38
BstC8I GCNNGC 2 cut(s) 714, 1281
BstDEI CTNAG 4 cut(s) 636, 875, 961, 981
BstDSI CCRYGG 1 cut(s) 810
BstENI CCTNNNNNAGG 2 cut(s) 516, 1230
BstF5I GGATG 8 cut(s) 163, 319, 406, 468, 565, 787, 1214, 1394
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 1 cut(s) 107
BstKTI GATC 7 cut(s) 184, 379, 406, 586, 892, 973, 1157
BstMAI GTCTC 2 cut(s) 193, 519
BstMBI GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
BstMWI GCNNNNNNNGC 2 cut(s) 1049, 1340
BstNI CCWGG 2 cut(s) 246, 1219
BstSCI CCNGG 3 cut(s) 244, 923, 1217
BstSFI CTRYAG 1 cut(s) 1128
BstSLI GKGCMC 1 cut(s) 27
BstV1I GCAGC 3 cut(s) 1027, 1142, 1321
BstV2I GAAGAC 2 cut(s) 690, 1014
BstX2I RGATCY 4 cut(s) 376, 583, 970, 1154
BstXI CCANNNNNNTGG 1 cut(s) 1352
BstYI RGATCY 4 cut(s) 376, 583, 970, 1154
BsuI GTATCC 1 cut(s) 1312
BsuRI GGCC 2 cut(s) 251, 1283
BtgI CCRYGG 1 cut(s) 810
BtsCI GGATG 8 cut(s) 163, 319, 406, 468, 565, 787, 1214, 1394
BtsIMutI CAGTG 2 cut(s) 883, 978
Cac8I GCNNGC 2 cut(s) 714, 1281
CaiI CAGNNNCTG 1 cut(s) 1238
CciI TCATGA 1 cut(s) 1093
CfoI GCGC 1 cut(s) 107
Cfr10I RCCGGY 2 cut(s) 43, 101
Cfr13I GGNCC 3 cut(s) 249, 349, 1388
Csp6I GTAC 1 cut(s) 730
CviQI GTAC 1 cut(s) 730
DdeI CTNAG 4 cut(s) 636, 875, 961, 981
DinI GGCGCC 1 cut(s) 106
DpnI GATC 7 cut(s) 183, 378, 405, 585, 891, 972, 1156
DpnII GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
EaeI YGGCCR 1 cut(s) 1281
Eam1104I CTCTTC 4 cut(s) 81, 217, 1089, 1364
EarI CTCTTC 4 cut(s) 81, 217, 1089, 1364
Ecl136II GAGCTC 1 cut(s) 227
Eco130I CCWWGG 2 cut(s) 108, 810
Eco24I GRGCYC 1 cut(s) 229
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 2 cut(s) 349, 1388
Eco53kI GAGCTC 1 cut(s) 227
Eco88I CYCGRG 1 cut(s) 707
EcoICRI GAGCTC 1 cut(s) 227
EcoNI CCTNNNNNAGG 2 cut(s) 516, 1230
EcoO109I RGGNCCY 1 cut(s) 349
EcoRII CCWGG 2 cut(s) 244, 1217
EcoRV GATATC 1 cut(s) 6
EcoT14I CCWWGG 2 cut(s) 108, 810
EcoT22I ATGCAT 1 cut(s) 1211
EcoT38I GRGCYC 1 cut(s) 229
EgeI GGCGCC 1 cut(s) 106
EheI GGCGCC 1 cut(s) 106
ErhI CCWWGG 2 cut(s) 108, 810
FaqI GGGAC 1 cut(s) 362
FauI CCCGC 2 cut(s) 72, 870
FbaI TGATCA 3 cut(s) 181, 403, 889
Fnu4HI GCNGC 3 cut(s) 1041, 1131, 1335
FokI GGATG 8 cut(s) 170, 326, 413, 455, 572, 794, 1201, 1381
FriOI GRGCYC 1 cut(s) 229
Fsp4HI GCNGC 3 cut(s) 1041, 1131, 1335
FspBI CTAG 2 cut(s) 747, 1004
GlaI GCGC 1 cut(s) 106
GluI GCNGC 3 cut(s) 1041, 1131, 1335
HaeII RGCGCY 1 cut(s) 108
HaeIII GGCC 2 cut(s) 251, 1283
HapII CCGG 4 cut(s) 44, 102, 924, 1398
HhaI GCGC 1 cut(s) 107
Hin1I GRCGYC 1 cut(s) 105
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
HindIII AAGCTT 2 cut(s) 958, 1175
HinfI GANTC 6 cut(s) 425, 698, 850, 1064, 1138, 1222
HpaII CCGG 4 cut(s) 44, 102, 924, 1398
HphI GGTGA 4 cut(s) 191, 449, 449, 1009
Hpy166II GTNNAC 2 cut(s) 457, 936
Hpy188I TCNGA 3 cut(s) 221, 408, 1063
Hpy188III TCNNGA 2 cut(s) 587, 1094
Hpy8I GTNNAC 2 cut(s) 457, 936
Hpy99I CGWCG 2 cut(s) 59, 311
HpyAV CCTTC 5 cut(s) 385, 576, 655, 1212, 1401
HpyCH4III ACNGT 2 cut(s) 689, 940
HpyCH4IV ACGT 1 cut(s) 1325
HpyCH4V TGCA 8 cut(s) 492, 607, 752, 845, 1130, 1148, 1209, 1259
HpyF10VI GCNNNNNNNGC 2 cut(s) 1049, 1340
HpyF3I CTNAG 4 cut(s) 636, 875, 961, 981
HpySE526I ACGT 1 cut(s) 1325
Hsp92I GRCGYC 1 cut(s) 105
HspAI GCGC 1 cut(s) 105
KasI GGCGCC 1 cut(s) 104
Ksp22I TGATCA 3 cut(s) 181, 403, 889
Kzo9I GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
LguI GCTCTTC 3 cut(s) 81, 217, 1364
LmnI GCTCC 5 cut(s) 232, 241, 814, 1057, 1235
Lsp1109I GCAGC 3 cut(s) 1027, 1142, 1321
LweI GCATC 2 cut(s) 115, 1321
MaeI CTAG 2 cut(s) 747, 1004
MaeII ACGT 1 cut(s) 1325
MaeIII GTNAC 5 cut(s) 235, 365, 689, 940, 1358
MalI GATC 7 cut(s) 183, 378, 405, 585, 891, 972, 1156
MboI GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
MflI RGATCY 4 cut(s) 376, 583, 970, 1154
MhlI GDGCHC 3 cut(s) 27, 229, 819
MlsI TGGCCA 1 cut(s) 1283
MluCI AATT 2 cut(s) 12, 254
MluNI TGGCCA 1 cut(s) 1283
Mly113I GGCGCC 1 cut(s) 105
MlyI GAGTC 1 cut(s) 1073
MnlI CCTC 9 cut(s) 61, 70, 130, 196, 273, 304, 522, 900, 1283
Mox20I TGGCCA 1 cut(s) 1283
Mph1103I ATGCAT 1 cut(s) 1211
MscI TGGCCA 1 cut(s) 1283
MseI TTAA 4 cut(s) 96, 554, 771, 1402
MslI CAYNNNNRTG 3 cut(s) 326, 462, 1092
Msp20I TGGCCA 1 cut(s) 1283
MspA1I CMGCKG 1 cut(s) 947
MspI CCGG 4 cut(s) 44, 102, 924, 1398
MspR9I CCNGG 3 cut(s) 246, 925, 1219
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 2 cut(s) 246, 1219
MwoI GCNNNNNNNGC 2 cut(s) 1049, 1340
NarI GGCGCC 1 cut(s) 105
NciI CCSGG 1 cut(s) 925
NcoI CCATGG 1 cut(s) 810
NdeII GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
NmuCI GTSAC 2 cut(s) 689, 940
NsiI ATGCAT 1 cut(s) 1211
NspV TTCGAA 1 cut(s) 38
PagI TCATGA 1 cut(s) 1093
PciSI GCTCTTC 3 cut(s) 81, 217, 1364
PctI GAATGC 1 cut(s) 985
PfeI GAWTC 5 cut(s) 425, 698, 850, 1138, 1222
PfoI TCCNGGA 1 cut(s) 1217
PkrI GCNGC 3 cut(s) 1042, 1132, 1336
PleI GAGTC 1 cut(s) 1072
PluTI GGCGCC 1 cut(s) 108
PpsI GAGTC 1 cut(s) 1072
PpuMI RGGWCCY 1 cut(s) 349
Psp124BI GAGCTC 1 cut(s) 229
Psp5II RGGWCCY 1 cut(s) 349
Psp6I CCWGG 2 cut(s) 244, 1217
PspGI CCWGG 2 cut(s) 244, 1217
PspPI GGNCC 3 cut(s) 249, 349, 1388
PspPPI RGGWCCY 1 cut(s) 349
PstI CTGCAG 1 cut(s) 1132
PstNI CAGNNNCTG 1 cut(s) 1238
PsuI RGATCY 4 cut(s) 376, 583, 970, 1154
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 1 cut(s) 731
RsaNI GTAC 1 cut(s) 730
RseI CAYNNNNRTG 3 cut(s) 326, 462, 1092
SacI GAGCTC 1 cut(s) 229
SapI GCTCTTC 3 cut(s) 81, 217, 1364
SaqAI TTAA 4 cut(s) 96, 554, 771, 1402
SatI GCNGC 3 cut(s) 1041, 1131, 1335
Sau3AI GATC 7 cut(s) 181, 376, 403, 583, 889, 970, 1154
Sau96I GGNCC 3 cut(s) 249, 349, 1388
SchI GAGTC 1 cut(s) 1073
ScrFI CCNGG 3 cut(s) 246, 925, 1219
SduI GDGCHC 3 cut(s) 27, 229, 819
SfaNI GCATC 2 cut(s) 115, 1321
SfcI CTRYAG 1 cut(s) 1128
SfoI GGCGCC 1 cut(s) 106
SfuI TTCGAA 1 cut(s) 38
SinI GGWCC 2 cut(s) 349, 1388
SmiMI CAYNNNNRTG 3 cut(s) 326, 462, 1092
Sse9I AATT 2 cut(s) 12, 254
SsiI CCGC 4 cut(s) 65, 545, 863, 1337
SspDI GGCGCC 1 cut(s) 104
SspI AATATT 1 cut(s) 805
SspMI CTAG 2 cut(s) 747, 1004
SstI GAGCTC 1 cut(s) 229
StyD4I CCNGG 3 cut(s) 244, 923, 1217
StyI CCWWGG 2 cut(s) 108, 810
TaaI ACNGT 2 cut(s) 689, 940
TaiI ACGT 1 cut(s) 1328
TaqI TCGA 2 cut(s) 38, 84
TasI AATT 2 cut(s) 12, 254
TatI WGTACW 1 cut(s) 729
TfiI GAWTC 5 cut(s) 425, 698, 850, 1138, 1222
Tru1I TTAA 4 cut(s) 96, 554, 771, 1402
Tru9I TTAA 4 cut(s) 96, 554, 771, 1402
TscAI CASTG 2 cut(s) 883, 985
TseFI GTSAC 2 cut(s) 689, 940
TseI GCWGC 3 cut(s) 1040, 1130, 1334
Tsp45I GTSAC 2 cut(s) 689, 940
TspDTI ATGAA 9 cut(s) 465, 529, 576, 615, 978, 1076, 1194, 1203, 1383
TspGWI ACGGA 2 cut(s) 43, 254
TspRI CASTG 2 cut(s) 883, 985
VpaK11BI GGWCC 2 cut(s) 349, 1388
XagI CCTNNNNNAGG 2 cut(s) 516, 1230
XapI RAATTY 1 cut(s) 254
XcmI CCANNNNNNNNNTGG 1 cut(s) 1165
XspI CTAG 2 cut(s) 747, 1004
Zsp2I ATGCAT 1 cut(s) 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.