pycom14g12160

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
15204318 .. 15205476
1159 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g12160.2

Sequence Viewer

Length: 351 bp
ATGGCTGCAAAAGTTCTTGCCAATGTGCTCGTAATGGGCTCGGCAATAGTGGGCAGGGCTGTGCTCCGTGCATACCAGCAGGCAATCTCAAATGCCTCAAAGAATGGTGTTGCTAACGAAGCAGTAAAGAATATTAGGAGAGCTAGCAAAATAATGGCTGAACCAGAGGCAAGGCAGGTTCTAGGTATCACGGAGCGTGCATCATGGGAGGAGATCTTGCAGAGGTATGACAGCTTGTTCGAGCGGAATGCCAAAAATGGAAGTTTTTATCTTCAGTCAAAGGTCCATAGAGCTAAAGAAGTCTTAGAAGGCGCTTATGCAAAGAGGGCTCAACGGACTCCTGATGCATAA

Protein Analysis

117

Amino Acids

12.82

Weight (kDa)

10.12

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012892)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 166
AccBSI CCGCTC 1 cut(s) 244
AciI CCGC 1 cut(s) 244
AcuI CTGAAG 1 cut(s) 257
AluBI AGCT 3 cut(s) 143, 234, 293
AluI AGCT 3 cut(s) 143, 234, 293
Alw21I GWGCWC 2 cut(s) 30, 66
ApeKI GCWGC 1 cut(s) 5
ArsI GACNNNNNNTTYG 2 cut(s) 221, 253
AspLEI GCGC 1 cut(s) 314
AspS9I GGNCC 1 cut(s) 283
AsuNHI GCTAGC 1 cut(s) 143
AvaII GGWCC 1 cut(s) 283
BanII GRGCYC 2 cut(s) 41, 331
Bbv12I GWGCWC 2 cut(s) 30, 66
BcgI CGANNNNNNTGC 2 cut(s) 230, 264
BfaI CTAG 2 cut(s) 144, 182
BfoI RGCGCY 1 cut(s) 315
BfuAI ACCTGC 1 cut(s) 166
BglII AGATCT 1 cut(s) 213
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme18I GGWCC 1 cut(s) 283
BmgT120I GGNCC 1 cut(s) 283
BmsI GCATC 2 cut(s) 209, 334
BmtI GCTAGC 1 cut(s) 147
BseRI GAGGAG 1 cut(s) 224
BsiHKAI GWGCWC 2 cut(s) 30, 66
BsmI GAATGC 1 cut(s) 253
Bsp1286I GDGCHC 4 cut(s) 30, 41, 66, 331
Bsp143I GATC 1 cut(s) 213
BspACI CCGC 1 cut(s) 244
BspMI ACCTGC 1 cut(s) 166
BspOI GCTAGC 1 cut(s) 147
BsrBI CCGCTC 1 cut(s) 244
BssMI GATC 1 cut(s) 213
BstC8I GCNNGC 3 cut(s) 81, 145, 198
BstDEI CTNAG 1 cut(s) 304
BstH2I RGCGCY 1 cut(s) 315
BstHHI GCGC 1 cut(s) 314
BstKTI GATC 1 cut(s) 216
BstMBI GATC 1 cut(s) 213
BstMWI GCNNNNNNNGC 2 cut(s) 119, 326
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BveI ACCTGC 1 cut(s) 166
Cac8I GCNNGC 3 cut(s) 81, 145, 198
CfoI GCGC 1 cut(s) 314
Cfr13I GGNCC 1 cut(s) 283
CviAII CATG 1 cut(s) 204
CviJI RGCY 8 cut(s) 5, 39, 59, 143, 158, 234, 293, 329
CviKI_1 RGCY 8 cut(s) 5, 39, 59, 143, 158, 234, 293, 329
DdeI CTNAG 1 cut(s) 304
DpnI GATC 1 cut(s) 215
DpnII GATC 1 cut(s) 213
Eco24I GRGCYC 2 cut(s) 41, 331
Eco47I GGWCC 1 cut(s) 283
Eco57I CTGAAG 1 cut(s) 257
EcoT22I ATGCAT 1 cut(s) 349
EcoT38I GRGCYC 2 cut(s) 41, 331
FaeI CATG 1 cut(s) 207
FaiI YATR 6 cut(s) 73, 205, 228, 288, 318, 349
FatI CATG 1 cut(s) 203
Fnu4HI GCNGC 1 cut(s) 6
FriOI GRGCYC 2 cut(s) 41, 331
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 2 cut(s) 144, 182
GlaI GCGC 1 cut(s) 313
GluI GCNGC 1 cut(s) 6
HaeII RGCGCY 1 cut(s) 315
HhaI GCGC 1 cut(s) 314
Hin1II CATG 1 cut(s) 207
Hin6I GCGC 1 cut(s) 312
HinP1I GCGC 1 cut(s) 312
HinfI GANTC 1 cut(s) 337
Hpy188III TCNNGA 1 cut(s) 341
HpyAV CCTTC 1 cut(s) 302
HpyCH4V TGCA 6 cut(s) 8, 71, 200, 220, 320, 347
HpyF10VI GCNNNNNNNGC 2 cut(s) 119, 326
HpyF3I CTNAG 1 cut(s) 304
Hsp92II CATG 1 cut(s) 207
HspAI GCGC 1 cut(s) 312
Kzo9I GATC 1 cut(s) 213
LmnI GCTCC 2 cut(s) 69, 193
LpnPI CCDG 5 cut(s) 40, 65, 89, 161, 177
LweI GCATC 2 cut(s) 209, 334
MaeI CTAG 2 cut(s) 144, 182
MalI GATC 1 cut(s) 215
MbiI CCGCTC 1 cut(s) 244
MboI GATC 1 cut(s) 213
MboII GAAGA 1 cut(s) 263
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 4 cut(s) 30, 41, 66, 331
MlyI GAGTC 1 cut(s) 331
MnlI CCTC 5 cut(s) 106, 160, 202, 216, 318
Mph1103I ATGCAT 1 cut(s) 349
Mva1269I GAATGC 1 cut(s) 253
MwoI GCNNNNNNNGC 2 cut(s) 119, 326
NdeII GATC 1 cut(s) 213
NheI GCTAGC 1 cut(s) 143
NlaIII CATG 1 cut(s) 207
NmeAIII GCCGAG 1 cut(s) 20
NsiI ATGCAT 1 cut(s) 349
PctI GAATGC 1 cut(s) 253
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 331
PspPI GGNCC 1 cut(s) 283
PsuI RGATCY 1 cut(s) 213
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 213
Sau96I GGNCC 1 cut(s) 283
SchI GAGTC 1 cut(s) 331
SduI GDGCHC 4 cut(s) 30, 41, 66, 331
SetI ASST 7 cut(s) 145, 180, 187, 227, 236, 285, 295
SfaNI GCATC 2 cut(s) 209, 334
SinI GGWCC 1 cut(s) 283
SsiI CCGC 1 cut(s) 244
SspI AATATT 1 cut(s) 133
SspMI CTAG 2 cut(s) 144, 182
TaqI TCGA 1 cut(s) 240
TseI GCWGC 1 cut(s) 5
TspGWI ACGGA 3 cut(s) 56, 206, 349
VpaK11BI GGWCC 1 cut(s) 283
XspI CTAG 2 cut(s) 144, 182
Zsp2I ATGCAT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.