Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0005274

Physical Location & Seq

Genomic Coordinates Forward (+)

30487 .. 35236

Gene Structure 4750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g00040.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGACATTCAAAATATACGGTAACGCGCAGCTTCTGCCCAGACAACCCCGTCAGTCTCTTTCGGTTTTTGAAAACCCTAACATTTATCACAGAGAGGACAAAGAGACAGCTCTCCTCGCCCCTGGGACGCCACACGCCACACCACCTCCCCGCCCCTCCCTATACTTAGCAGTCCGTCTGCCTTCCGCCGTCATCTGCTTCGTTTTCTTCAGAATAAGATTAGGAGAGGAGATGGCAGACCGGTTGACCCGTATTGCAATCGTGAGCTCCGACAGATGCAAGCCAAAGAAGTGCCGCCAGGAATGCAAGAAGAGCTGTCCTGTTGTCAAGACTGGTAAACTATGTATTGAGGTTACCCCTGCAGCCAAGATTGCTTTTATCTCGGAAGAATTGTGCATTGGGTGTGGTATCTGCGTTAAGAAATGCCCATTTGAAGCAATTCAAATCATCAACTTACCGAAGGATTTAGACAAAGATACGACCCATCGTTATGGTCCTAACACTTTCAAACTACACAGGTTACCAGTCCCAAGGCCAGGTCAAGTTCTAGGTTTGGTTGGAACTAATGGCATTGGGAAGTCGACTGCCCTCAAAGTTTTGGCTGGAAAGTTGAAACCAAATTTAGGCCGTTTCAAGAATCCTCCAGATTGGCAGGAAATATTGACCTACTTCCGGGGATCTGAGCTGCAGAATTATTTTACCCGTATTCTGGAAGATAATTTGAAGGCCATTATAAAGCCCCAGTATGTTGATCACATTCCAAAAGCAGTTCAAGGAAATGTTGGGGAGGTGCTCAACCAGAAAGATGAGAGGGATATGAAGGAAGAACTGTGTGCTGACCTTGAGCTGAACCAGGTTATAGAACGTAGTGTAGGGGATTTATCAGGTGGGGAGCTTCAAAGATTTGCCATTGCTGTCGTCGCCATACAGAATGCAGAGATATATATGTTTGACGAACCTTCAAGTTATCTTGATGTGAAACAGAGGCTTAAAGCTGCCCAAGTTATCCGATCTTTACTTAGGCCTAATAGCTATGTAATTGTTGTGGAGCATGATCTTAGTGTCTTGGATTACTTGTCAGACTTCATTTGCTGTTTATATGGGAAACCAGGTGCATATGGAGTTGTGACTCTTCCATTCTCAGTTAGAGAAGGAATCAACATCTTCTTGGCTGGATTTGTTCCTACGGAAAATCTTAGGTTCCGAGATGAATCTCTGACATTTAAGGTTGCTGAGACACCACAGGAAAGTGCTGAGGAAATTGAGACATATGCACGATATAGATACCCATCAATGAGTAAAACTCAGGGAAATTTCAGGCTTCGTGTGGTTGAGGGTGAATTTACGGATTCTCAAATTATTGTGATGCTGGGTGAGAACGGAACGGGGAAGACTACATTTATTCGTATGCTGGCGGGTCTATTGAAACCTGATATTGTAGAAAATTCAGATGTGGAGATACCTGAATTCAATGTTTCTTACAAGCCCCAGAAAATCAGTCCAAAGTTTCAATCCACTGTCAGACACTTGTTACATTCAAAAATTCGTGATTCATATACTCATCCACAATTTATGTCGGATGTGATGAAGCCTCTTCTAATTGAACAATTAATGATCGATCAAGAAGTCGTGAATCTCTCTGGCGGAGAGTTGCAGAGGGTTGCATTATGCCTATGCCTCGGGAAGCCAGCAGATATTTATCTGATAGATGAACCAAGTGCATATCTTGATTCTGAGCAGCGTATTGTTGCTTCTAAAGTCATAAAGAGGTTCATCCTTCATGCTAAGAAAACTGCTTTCGTGGTTGAACATGATTTTATTATGGCTACCTACTTGGCGGATAGAGTTATAGTCTATGAGGGGAAGCCGTCAATTGATTGTACTGCAAATTGTCCCCAGTCATTGTTGACTGGGATGAATCTATTCTTATCGGCAGCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000166 GO:0003674 GO:0005215 GO:0005488 GO:0005506 GO:0005524 GO:0006403 GO:0006405 GO:0006412 GO:0006413 GO:0006415 GO:0006518 GO:0006611 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017076 GO:0019538 GO:0022411 GO:0022613 GO:0030554 GO:0031503 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0033036 GO:0033750 GO:0034613 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042254 GO:0042886 GO:0043021 GO:0043024 GO:0043043 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043603 GO:0043604 GO:0043624 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044877 GO:0045184 GO:0046872 GO:0046907 GO:0046914 GO:0050657 GO:0050658 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran Fer4 RLI

Protein Analysis

648

Amino Acids

72.7

Weight (kDa)

8.3

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19210
fragaria_vesca	FvH4_2g37360 FvH4_2g37360
malus_domestica	MD08G1001700.v1.1 MD09G1160100.v1.1 MD15G1001000.v1.1 MD17G1145900.v1.1
prunus_persica	Prupe.1G366500_v2.0.a1 Prupe.1G366500_v2.0.a1 Prupe.3G018600_v2.0.a1 Prupe.3G018600_v2.0.a1
pyrus_communis	pycom08g00110 pycom15g00040
rosa_chinensis	RchiOBHm_Chr5g0005021 RchiOBHm_Chr6g0304351 RchiOBHm_Chr6g0304361
rosa_laevigata	RLG00000010987
rosa_multiflora	Rmu_sc0010714.1_g000006 Rmu_sc0015928.1_g000008 Rmu_ssc0000218.1_g000041
rosa_roxburghii	Rroxscaffold_7G00163810
rosa_rugosa	Rorug06G0330700
rosa_samantha	Rh5AG042900 Rh5CG047400 Rh6AG443700 Rh6BG458700 Rh6CG456500 Rh6DG443200
rosa_wichuraiana	Rw6G038510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	734
AasI	GACNNNNNNGTC	1 cut(s)	48
AccI	GTMKAC	1 cut(s)	581
AccII	CGCG	1 cut(s)	26
AciI	CCGC	6 cut(s)	151, 186, 295, 1415, 1644, 1838
AclWI	GGATC	1 cut(s)	685
AcsI	RAATTY	6 cut(s)	619, 1312, 1340, 1444, 1466, 1542
AcuI	CTGAAG	1 cut(s)	193
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	1 cut(s)	1882
AfiI	CCNNNNNNNGG	4 cut(s)	536, 623, 672, 709
AgeI	ACCGGT	1 cut(s)	240
AjnI	CCWGG	5 cut(s)	121, 297, 535, 852, 1108
AjuI	GAANNNNNNNTTGG	2 cut(s)	381, 413
AluBI	AGCT	9 cut(s)	31, 110, 267, 315, 685, 847, 895, 995, 1032
AluI	AGCT	9 cut(s)	31, 110, 267, 315, 685, 847, 895, 995, 1032
Alw21I	GWGCWC	2 cut(s)	269, 795
Alw26I	GTCTC	4 cut(s)	60, 98, 1229, 1259
AlwI	GGATC	1 cut(s)	685
AlwNI	CAGNNNCTG	1 cut(s)	34
Ama87I	CYCGRG	1 cut(s)	1679
AoxI	GGCC	4 cut(s)	533, 625, 726, 1022
ApeKI	GCWGC	6 cut(s)	28, 362, 685, 995, 1738, 1934
ApoI	RAATTY	6 cut(s)	619, 1312, 1340, 1444, 1466, 1542
AseI	ATTAAT	1 cut(s)	1610
AsiGI	ACCGGT	1 cut(s)	240
Asp700I	GAANNNNTTC	2 cut(s)	438, 1922
AspLEI	GCGC	1 cut(s)	28
AspS9I	GGNCC	1 cut(s)	494
AsuC2I	CCSGG	1 cut(s)	674
AsuHPI	GGTGA	2 cut(s)	1349, 1385
AvaI	CYCGRG	1 cut(s)	1679
AvaII	GGWCC	1 cut(s)	494
BanII	GRGCYC	1 cut(s)	269
BarI	GAAGNNNNNNTAC	2 cut(s)	1735, 1767
BbsI	GAAGAC	1 cut(s)	1397
Bbv12I	GWGCWC	2 cut(s)	269, 795
BbvCI	CCTCAGC	1 cut(s)	1254
BbvI	GCAGC	5 cut(s)	40, 374, 672, 982, 1750
BccI	CCATC	3 cut(s)	226, 492, 1297
BceAI	ACGGC	3 cut(s)	173, 612, 1852
BciT130I	CCWGG	5 cut(s)	123, 299, 537, 854, 1110
BclI	TGATCA	1 cut(s)	751
BcnI	CCSGG	1 cut(s)	674
BcoDI	GTCTC	4 cut(s)	60, 98, 1229, 1259
BfaI	CTAG	1 cut(s)	548
BfmI	CTRYAG	2 cut(s)	360, 686
BisI	GCNGC	7 cut(s)	29, 295, 363, 686, 996, 1739, 1935
BlsI	GCNGC	7 cut(s)	30, 296, 364, 687, 997, 1740, 1936
Bme1390I	CCNGG	6 cut(s)	123, 299, 537, 674, 854, 1110
Bme18I	GGWCC	1 cut(s)	494
BmeT110I	CYCGRG	1 cut(s)	1679
BmgT120I	GGNCC	1 cut(s)	494
BmiI	GGNNCC	1 cut(s)	1202
BmrFI	CCNGG	6 cut(s)	123, 299, 537, 674, 854, 1110
BmrI	ACTGGG	3 cut(s)	736, 1891, 1920
BmsI	GCATC	2 cut(s)	266, 1356
BmuI	ACTGGG	3 cut(s)	736, 1891, 1920
BpiI	GAAGAC	1 cut(s)	1397
BplI	GAGNNNNNCTC	2 cut(s)	1288, 1320
BpmI	CTGGAG	1 cut(s)	627
Bpu10I	CCTNAGC	1 cut(s)	1254
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	1 cut(s)	674
Bsa29I	ATCGAT	1 cut(s)	1617
BsaBI	GATNNNNATC	2 cut(s)	1288, 1698
BsaHI	GRCGYC	1 cut(s)	128
BsaJI	CCNNGG	5 cut(s)	121, 122, 530, 673, 1678
BsaWI	WCCGGW	1 cut(s)	240
BsaXI	ACNNNNNCTCC	2 cut(s)	130, 160
Bsc4I	CCNNNNNNNGG	4 cut(s)	536, 623, 672, 709
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	5 cut(s)	337, 524, 742, 1897, 1915
Bse3DI	GCAATG	1 cut(s)	909
Bse8I	GATNNNNATC	2 cut(s)	1288, 1698
BseBI	CCWGG	5 cut(s)	123, 299, 537, 854, 1110
BseCI	ATCGAT	1 cut(s)	1617
BseDI	CCNNGG	5 cut(s)	121, 122, 530, 673, 1678
BseGI	GGATG	4 cut(s)	1561, 1585, 1773, 1920
BseJI	GATNNNNATC	2 cut(s)	1288, 1698
BseLI	CCNNNNNNNGG	4 cut(s)	536, 623, 672, 709
BseMI	GCAATG	1 cut(s)	909
BseMII	CTCAG	6 cut(s)	672, 1155, 1224, 1245, 1319, 1725
BseNI	ACTGG	5 cut(s)	337, 524, 742, 1897, 1915
BseRI	GAGGAG	2 cut(s)	104, 242
BseXI	GCAGC	5 cut(s)	40, 374, 672, 982, 1750
BseYI	CCCAGC	1 cut(s)	1369
Bsh1236I	CGCG	1 cut(s)	26
BshFI	GGCC	4 cut(s)	535, 627, 728, 1024
BshTI	ACCGGT	1 cut(s)	240
BshVI	ATCGAT	1 cut(s)	1617
BsiHKAI	GWGCWC	2 cut(s)	269, 795
BsiHKCI	CYCGRG	1 cut(s)	1679
BsiSI	CCGG	2 cut(s)	241, 673
BslFI	GGGAC	3 cut(s)	139, 512, 1878
BslI	CCNNNNNNNGG	4 cut(s)	536, 623, 672, 709
BsmAI	GTCTC	4 cut(s)	60, 98, 1229, 1259
BsmFI	GGGAC	3 cut(s)	139, 512, 1878
BsmI	GAATGC	2 cut(s)	308, 937
BsnI	GGCC	4 cut(s)	535, 627, 728, 1024
BsoBI	CYCGRG	1 cut(s)	1679
Bsp1286I	GDGCHC	2 cut(s)	269, 795
Bsp143I	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
BspACI	CCGC	6 cut(s)	151, 186, 295, 1415, 1644, 1838
BspANI	GGCC	4 cut(s)	535, 627, 728, 1024
BspCNI	CTCAG	6 cut(s)	673, 1154, 1225, 1246, 1318, 1726
BspDI	ATCGAT	1 cut(s)	1617
BspFNI	CGCG	1 cut(s)	26
BspLI	GGNNCC	1 cut(s)	1202
BspMAI	CTGCAG	2 cut(s)	364, 690
BspPI	GGATC	1 cut(s)	685
BspQI	GCTCTTC	1 cut(s)	305
BsrDI	GCAATG	1 cut(s)	909
BsrFI	RCCGGY	1 cut(s)	240
BsrI	ACTGG	5 cut(s)	337, 524, 742, 1897, 1915
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	5 cut(s)	121, 122, 530, 673, 1678
BssMI	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
BssNI	GRCGYC	1 cut(s)	128
BssT1I	CCWWGG	1 cut(s)	530
Bst2UI	CCWGG	5 cut(s)	123, 299, 537, 854, 1110
Bst4CI	ACNGT	3 cut(s)	20, 831, 1519
Bst6I	CTCTTC	3 cut(s)	305, 1137, 1599
BstACI	GRCGYC	1 cut(s)	128
BstAPI	GCANNNNNTGC	1 cut(s)	34
BstC8I	GCNNGC	3 cut(s)	281, 1413, 1689
BstEII	GGTNACC	2 cut(s)	352, 519
BstF5I	GGATG	4 cut(s)	1561, 1585, 1773, 1920
BstFNI	CGCG	1 cut(s)	26
BstHHI	GCGC	1 cut(s)	28
BstKTI	GATC	6 cut(s)	680, 754, 1013, 1057, 1617, 1621
BstMAI	GTCTC	4 cut(s)	60, 98, 1229, 1259
BstMBI	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
BstMWI	GCNNNNNNNGC	6 cut(s)	34, 116, 303, 312, 371, 920
BstNI	CCWGG	5 cut(s)	123, 299, 537, 854, 1110
BstPI	GGTNACC	2 cut(s)	352, 519
BstSCI	CCNGG	6 cut(s)	121, 297, 535, 672, 852, 1108
BstSFI	CTRYAG	2 cut(s)	360, 686
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	5 cut(s)	40, 374, 672, 982, 1750
BstV2I	GAAGAC	1 cut(s)	1397
BstX2I	RGATCY	1 cut(s)	677
BstXI	CCANNNNNNTGG	1 cut(s)	491
BstYI	RGATCY	1 cut(s)	677
Bsu15I	ATCGAT	1 cut(s)	1617
BsuRI	GGCC	4 cut(s)	535, 627, 728, 1024
BsuTUI	ATCGAT	1 cut(s)	1617
BtsCI	GGATG	4 cut(s)	1561, 1585, 1773, 1920
BtsIMutI	CAGTG	1 cut(s)	1515
Cac8I	GCNNGC	3 cut(s)	281, 1413, 1689
CaiI	CAGNNNCTG	1 cut(s)	34
CfoI	GCGC	1 cut(s)	28
Cfr10I	RCCGGY	1 cut(s)	240
Cfr13I	GGNCC	1 cut(s)	494
ClaI	ATCGAT	1 cut(s)	1617
CseI	GACGC	1 cut(s)	136
CsiI	ACCWGGT	2 cut(s)	852, 1108
Csp6I	GTAC	1 cut(s)	1881
CspAI	ACCGGT	1 cut(s)	240
CviAII	CATG	3 cut(s)	1052, 1781, 1811
CviQI	GTAC	1 cut(s)	1881
DpnI	GATC	6 cut(s)	679, 753, 1012, 1056, 1616, 1620
DpnII	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
DrdI	GACNNNNNNGTC	1 cut(s)	48
DseDI	GACNNNNNNGTC	1 cut(s)	48
Eam1104I	CTCTTC	3 cut(s)	305, 1137, 1599
EarI	CTCTTC	3 cut(s)	305, 1137, 1599
EciI	GGCGGA	3 cut(s)	175, 1659, 1853
Ecl136II	GAGCTC	1 cut(s)	267
Eco130I	CCWWGG	1 cut(s)	530
Eco147I	AGGCCT	1 cut(s)	1024
Eco24I	GRGCYC	1 cut(s)	269
Eco47I	GGWCC	1 cut(s)	494
Eco53kI	GAGCTC	1 cut(s)	267
Eco57I	CTGAAG	1 cut(s)	193
Eco88I	CYCGRG	1 cut(s)	1679
Eco91I	GGTNACC	2 cut(s)	352, 519
EcoICRI	GAGCTC	1 cut(s)	267
EcoO65I	GGTNACC	2 cut(s)	352, 519
EcoRI	GAATTC	1 cut(s)	1466
EcoRII	CCWGG	5 cut(s)	121, 297, 535, 852, 1108
EcoT14I	CCWWGG	1 cut(s)	530
EcoT38I	GRGCYC	1 cut(s)	269
ErhI	CCWWGG	1 cut(s)	530
FaeI	CATG	3 cut(s)	1055, 1784, 1814
FaqI	GGGAC	3 cut(s)	139, 512, 1878
FatI	CATG	3 cut(s)	1051, 1780, 1810
FauI	CCCGC	2 cut(s)	158, 1408
FauNDI	CATATG	2 cut(s)	1117, 1270
FbaI	TGATCA	1 cut(s)	751
FblI	GTMKAC	1 cut(s)	581
Fnu4HI	GCNGC	7 cut(s)	29, 295, 363, 686, 996, 1739, 1935
FokI	GGATG	4 cut(s)	1548, 1592, 1760, 1927
FriOI	GRGCYC	1 cut(s)	269
Fsp4HI	GCNGC	7 cut(s)	29, 295, 363, 686, 996, 1739, 1935
FspBI	CTAG	1 cut(s)	548
GlaI	GCGC	1 cut(s)	27
GluI	GCNGC	7 cut(s)	29, 295, 363, 686, 996, 1739, 1935
GsaI	CCCAGC	1 cut(s)	1373
GsuI	CTGGAG	1 cut(s)	627
HaeIII	GGCC	4 cut(s)	535, 627, 728, 1024
HapII	CCGG	2 cut(s)	241, 673
HgaI	GACGC	1 cut(s)	136
HhaI	GCGC	1 cut(s)	28
Hin1I	GRCGYC	1 cut(s)	128
Hin1II	CATG	3 cut(s)	1055, 1784, 1814
Hin6I	GCGC	1 cut(s)	26
HinP1I	GCGC	1 cut(s)	26
HincII	GTYRAC	3 cut(s)	246, 582, 1908
HindII	GTYRAC	3 cut(s)	246, 582, 1908
HinfI	GANTC	9 cut(s)	637, 1129, 1155, 1211, 1349, 1550, 1633, 1730, 1918
HpaII	CCGG	2 cut(s)	241, 673
HphI	GGTGA	2 cut(s)	1349, 1385
Hpy166II	GTNNAC	4 cut(s)	246, 338, 582, 1908
Hpy8I	GTNNAC	4 cut(s)	246, 338, 582, 1908
Hpy99I	CGWCG	1 cut(s)	923
HpyAV	CCTTC	7 cut(s)	192, 454, 718, 814, 969, 1145, 1787
HpyCH4III	ACNGT	3 cut(s)	20, 831, 1519
HpyCH4IV	ACGT	1 cut(s)	865
HpyF10VI	GCNNNNNNNGC	6 cut(s)	34, 116, 303, 312, 371, 920
HpySE526I	ACGT	1 cut(s)	865
Hsp92I	GRCGYC	1 cut(s)	128
Hsp92II	CATG	3 cut(s)	1055, 1784, 1814
HspAI	GCGC	1 cut(s)	26
Ksp22I	TGATCA	1 cut(s)	751
Kzo9I	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
LguI	GCTCTTC	1 cut(s)	305
LmnI	GCTCC	3 cut(s)	272, 892, 1048
Lsp1109I	GCAGC	5 cut(s)	40, 374, 672, 982, 1750
LweI	GCATC	2 cut(s)	266, 1356
MabI	ACCWGGT	2 cut(s)	852, 1108
MaeI	CTAG	1 cut(s)	548
MaeII	ACGT	1 cut(s)	865
MaeIII	GTNAC	5 cut(s)	20, 352, 519, 1126, 1530
MalI	GATC	6 cut(s)	679, 753, 1012, 1056, 1616, 1620
MboI	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
MboII	GAAGA	9 cut(s)	199, 322, 398, 725, 836, 1124, 1156, 1402, 1586
MfeI	CAATTG	1 cut(s)	1872
MflI	RGATCY	1 cut(s)	677
MhlI	GDGCHC	2 cut(s)	269, 795
MlyI	GAGTC	1 cut(s)	1123
MmeI	TCCRAC	3 cut(s)	294, 538, 1557
MroXI	GAANNNNTTC	2 cut(s)	438, 1922
MseI	TTAA	4 cut(s)	417, 990, 1224, 1610
MslI	CAYNNNNRTG	1 cut(s)	489
MspI	CCGG	2 cut(s)	241, 673
MspR9I	CCNGG	6 cut(s)	123, 299, 537, 674, 854, 1110
MunI	CAATTG	1 cut(s)	1872
Mva1269I	GAATGC	2 cut(s)	308, 937
MvaI	CCWGG	5 cut(s)	123, 299, 537, 854, 1110
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	6 cut(s)	34, 116, 303, 312, 371, 920
NciI	CCSGG	1 cut(s)	674
NdeI	CATATG	2 cut(s)	1117, 1270
NdeII	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
NlaIII	CATG	3 cut(s)	1055, 1784, 1814
NlaIV	GGNNCC	1 cut(s)	1202
NmuCI	GTSAC	1 cut(s)	1126
PasI	CCCWGGG	1 cut(s)	122
PceI	AGGCCT	1 cut(s)	1024
PciSI	GCTCTTC	1 cut(s)	305
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PctI	GAATGC	2 cut(s)	308, 937
PdmI	GAANNNNTTC	2 cut(s)	438, 1922
PfeI	GAWTC	8 cut(s)	637, 1155, 1211, 1349, 1550, 1633, 1730, 1918
PinAI	ACCGGT	1 cut(s)	240
PkrI	GCNGC	7 cut(s)	30, 296, 364, 687, 997, 1740, 1936
PleI	GAGTC	1 cut(s)	1123
PpsI	GAGTC	1 cut(s)	1123
PshBI	ATTAAT	1 cut(s)	1610
PsiI	TTATAA	1 cut(s)	734
Psp124BI	GAGCTC	1 cut(s)	269
Psp6I	CCWGG	5 cut(s)	121, 297, 535, 852, 1108
PspEI	GGTNACC	2 cut(s)	352, 519
PspFI	CCCAGC	1 cut(s)	1369
PspGI	CCWGG	5 cut(s)	121, 297, 535, 852, 1108
PspN4I	GGNNCC	1 cut(s)	1202
PspPI	GGNCC	1 cut(s)	494
PstI	CTGCAG	2 cut(s)	364, 690
PstNI	CAGNNNCTG	1 cut(s)	34
PsuI	RGATCY	1 cut(s)	677
RsaI	GTAC	1 cut(s)	1882
RsaNI	GTAC	1 cut(s)	1881
RseI	CAYNNNNRTG	1 cut(s)	489
SacI	GAGCTC	1 cut(s)	269
SalI	GTCGAC	1 cut(s)	580
SapI	GCTCTTC	1 cut(s)	305
SaqAI	TTAA	4 cut(s)	417, 990, 1224, 1610
SatI	GCNGC	7 cut(s)	29, 295, 363, 686, 996, 1739, 1935
Sau3AI	GATC	6 cut(s)	677, 751, 1010, 1054, 1614, 1618
Sau96I	GGNCC	1 cut(s)	494
SchI	GAGTC	1 cut(s)	1123
ScrFI	CCNGG	6 cut(s)	123, 299, 537, 674, 854, 1110
SduI	GDGCHC	2 cut(s)	269, 795
SexAI	ACCWGGT	2 cut(s)	852, 1108
SfaNI	GCATC	2 cut(s)	266, 1356
SfcI	CTRYAG	2 cut(s)	360, 686
SinI	GGWCC	1 cut(s)	494
SmiMI	CAYNNNNRTG	1 cut(s)	489
SmlI	CTYRAG	1 cut(s)	842
SmoI	CTYRAG	1 cut(s)	842
SseBI	AGGCCT	1 cut(s)	1024
SsiI	CCGC	6 cut(s)	151, 186, 295, 1415, 1644, 1838
SspI	AATATT	1 cut(s)	660
SspMI	CTAG	1 cut(s)	548
SstI	GAGCTC	1 cut(s)	269
StuI	AGGCCT	1 cut(s)	1024
StyD4I	CCNGG	6 cut(s)	121, 297, 535, 672, 852, 1108
StyI	CCWWGG	1 cut(s)	530
TaaI	ACNGT	3 cut(s)	20, 831, 1519
TaiI	ACGT	1 cut(s)	868
TaqI	TCGA	2 cut(s)	581, 1617
TatI	WGTACW	1 cut(s)	1880
TauI	GCSGC	1 cut(s)	297
TfiI	GAWTC	8 cut(s)	637, 1155, 1211, 1349, 1550, 1633, 1730, 1918
Tru1I	TTAA	4 cut(s)	417, 990, 1224, 1610
Tru9I	TTAA	4 cut(s)	417, 990, 1224, 1610
TscAI	CASTG	1 cut(s)	1522
TseFI	GTSAC	1 cut(s)	1126
TseI	GCWGC	6 cut(s)	28, 362, 685, 995, 1738, 1934
Tsp45I	GTSAC	1 cut(s)	1126
TspDTI	ATGAA	9 cut(s)	833, 1075, 1224, 1542, 1601, 1725, 1762, 1769, 1931
TspGWI	ACGGA	4 cut(s)	164, 1202, 1361, 1395
TspRI	CASTG	1 cut(s)	1522
VpaK11BI	GGWCC	1 cut(s)	494
VspI	ATTAAT	1 cut(s)	1610
XapI	RAATTY	6 cut(s)	619, 1312, 1340, 1444, 1466, 1542
XmiI	GTMKAC	1 cut(s)	581
XmnI	GAANNNNTTC	2 cut(s)	438, 1922
XspI	CTAG	1 cut(s)	548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.