Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005274

Physical Location & Seq

Genomic Coordinates Forward (+)

48379259 .. 48380900

Gene Structure 1642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0330700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGCCTTCTCCTAATACATTTCTTCTTTTGCCCTTCCTCTTATTCATGACTTCTCCTTCTCTTTCCCTCCCTCCGGCCCTCGTAGCGCCGATCTCAAAAGACCACTCTACTCTCCTCTACTCCCTCTCCCTCTACCTCAAAACCCCTCTCCAACCCACCAAGCTCCACCTCGACCTCGGCGCAGCCTTCACCTGGCTCGACTGCACCAAACCCTACTACAACTCCTCCACCTACCTCCACGTCCCCTGCGGCTCCCCTCTCTGCGACTCGTTTCACTCTTTTGCTTGCGGCAACTGCTACGAACCGCCCGGCCCGCATTGCGCCAACGACACGTGCTCTCTCTACCCGGAAAACCCTGTCTCCGGCAAGGCCACCTTGGACAACGCGCTCCTCGACGCTCTAGCCCTCCACACCACCGACGGCTCCGCTCCGGGTCGACTCGCTCTCCTCCCCCAGTTCGCCTTCTCGTGTTCCACCTCTTCTCTTCTCAAAGGCCTCGCCAAGAAAGTCAACGGCCTGGTCGCCCTAGGAAGGTCAAACCACTCCCTCCCGGCGCAGGTTAGCACCGCCCTCTCTCTGCCTCACTATTTTGCCCTGTGTCTCTCCGGTTCGGTCAATGCTTCTGGTGCAGCTTTCTTAGGATCCAAAGGGCCTTACATTTTTAACAAAATCGACGTCTCAAAGTCGCTTATTTACACTCCGCTGGTTTTGAACCCCGTCACGCGCACCGTAGTGAAGTATGGTCCTTCCGACGAGTATTTCATCGGCTTGACTGCCATAAAAGTCAACGGGAAAACGGTGCCGTTAAACAACACGTTATTAAGCATTGATCAGGATTCCGGCTTCGGCGGGACCACGTTAACTACGGATGCTCCGTACACCGTAATGGAAACTTCTATCTTCAAAGTTTTTGTTGAGTTGTTTGTGCGGGAATCCTCTGCTTTGAACCTCACGAGAACGAATGTGGTGAAGCCATTCGGTGTGTGCTACCTTGCGAAAGATATCGTGAGTACTCGTGCGGGGCCTGCTGTTCCGACCGTTGATCTCTTGATGGAGAGGGAGGATGTGATTTGGAGGATTCTTGGAACGAATTCAATGGTCAAGATTTCGAAGAAAGGAGGAGTGGAGTTGTGGTGTTTGGGGTTTGTGGACGGTGGGGCCAAACCGAGGTCTTCGATCATGATCGGAGGGCATCAAATGGAGGATAATCTCCTGCAATTTGATCTCGAGTCCAAGAGGTTAGGGTTTAGCTCATCAGTTTTGCTCCAAGGAACAAAATGTGCCGACTTCAATTTCGCTTCAGCAAAAGTTAATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000166 GO:0003674 GO:0005215 GO:0005488 GO:0005506 GO:0005524 GO:0006403 GO:0006405 GO:0006412 GO:0006413 GO:0006415 GO:0006518 GO:0006611 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017076 GO:0019538 GO:0022411 GO:0022613 GO:0030554 GO:0031503 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0033036 GO:0033750 GO:0034613 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042254 GO:0042886 GO:0043021 GO:0043024 GO:0043043 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043603 GO:0043604 GO:0043624 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044877 GO:0045184 GO:0046872 GO:0046907 GO:0046914 GO:0050657 GO:0050658 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran Fer4 RLI

Protein Analysis

439

Amino Acids

47.11

Weight (kDa)

8.17

Isoelectric Point (pI)

33.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	40 - 215	6.9e-36	Xylanase inhibitor N-terminal
TAXi_C	PF14541	252 - 417	1.6e-50	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19210
fragaria_vesca	FvH4_2g37360 FvH4_2g37360
malus_domestica	MD08G1001700.v1.1 MD09G1160100.v1.1 MD15G1001000.v1.1 MD17G1145900.v1.1
prunus_persica	Prupe.1G366500_v2.0.a1 Prupe.1G366500_v2.0.a1 Prupe.3G018600_v2.0.a1 Prupe.3G018600_v2.0.a1
pyrus_communis	pycom08g00110 pycom15g00040
rosa_chinensis	RchiOBHm_Chr5g0005021 RchiOBHm_Chr6g0304351 RchiOBHm_Chr6g0304361
rosa_laevigata	RLG00000010987
rosa_multiflora	Rmu_sc0010714.1_g000006 Rmu_sc0015928.1_g000008 Rmu_ssc0000218.1_g000041
rosa_roxburghii	Rroxscaffold_7G00163810
rosa_rugosa	Rorug06G0330700
rosa_samantha	Rh5AG042900 Rh5CG047400 Rh6AG443700 Rh6BG458700 Rh6CG456500 Rh6DG443200
rosa_wichuraiana	Rw6G038510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	678
Acc36I	ACCTGC	1 cut(s)	547
AccB1I	GGYRCC	1 cut(s)	799
AccBSI	CCGCTC	1 cut(s)	428
AccI	GTMKAC	1 cut(s)	436
AccII	CGCG	2 cut(s)	386, 724
AclWI	GGATC	2 cut(s)	636, 649
AcsI	RAATTY	1 cut(s)	1090
AcuI	CTGAAG	1 cut(s)	1284
AcvI	CACGTG	1 cut(s)	333
AcyI	GRCGYC	1 cut(s)	675
AfaI	GTAC	2 cut(s)	878, 1012
AfiI	CCNNNNNNNGG	6 cut(s)	73, 192, 362, 531, 556, 1167
AflIII	ACRYGT	2 cut(s)	330, 813
AgsI	TTSAA	5 cut(s)	712, 904, 946, 1095, 1291
AjiI	CACGTC	1 cut(s)	241
AjnI	CCWGG	2 cut(s)	191, 516
AleI	CACNNNNGTG	1 cut(s)	731
AluBI	AGCT	3 cut(s)	163, 632, 1251
AluI	AGCT	3 cut(s)	163, 632, 1251
Alw21I	GWGCWC	1 cut(s)	338
Alw26I	GTCTC	3 cut(s)	364, 605, 682
AlwI	GGATC	2 cut(s)	636, 649
Ama87I	CYCGRG	1 cut(s)	1226
AoxI	GGCC	8 cut(s)	75, 310, 369, 493, 514, 650, 1022, 1158
ApeKI	GCWGC	2 cut(s)	182, 629
ApoI	RAATTY	1 cut(s)	1090
ArsI	GACNNNNNNTTYG	4 cut(s)	660, 692, 1277, 1309
Asp700I	GAANNNNTTC	2 cut(s)	974, 1090
AspA2I	CCTAGG	1 cut(s)	526
AspLEI	GCGC	6 cut(s)	88, 182, 323, 388, 556, 726
AspS9I	GGNCC	7 cut(s)	76, 311, 650, 743, 852, 1022, 1158
AsuC2I	CCSGG	4 cut(s)	309, 347, 432, 551
AsuHPI	GGTGA	2 cut(s)	181, 979
AsuII	TTCGAA	1 cut(s)	1109
AvaI	CYCGRG	1 cut(s)	1226
AvaII	GGWCC	2 cut(s)	743, 852
AvrII	CCTAGG	1 cut(s)	526
BamHI	GGATCC	1 cut(s)	641
BanI	GGYRCC	1 cut(s)	799
BauI	CACGAG	3 cut(s)	466, 952, 1014
BbrPI	CACGTG	1 cut(s)	333
BbsI	GAAGAC	1 cut(s)	1164
Bbv12I	GWGCWC	1 cut(s)	338
BbvI	GCAGC	2 cut(s)	194, 641
BccI	CCATC	1 cut(s)	1045
BceAI	ACGGC	3 cut(s)	436, 529, 787
BciT130I	CCWGG	2 cut(s)	193, 518
BclI	TGATCA	1 cut(s)	829
BcnI	CCSGG	4 cut(s)	309, 347, 432, 551
BcoDI	GTCTC	3 cut(s)	364, 605, 682
BfaI	CTAG	2 cut(s)	401, 527
BfoI	RGCGCY	1 cut(s)	89
BfuAI	ACCTGC	1 cut(s)	547
BisI	GCNGC	4 cut(s)	183, 250, 289, 630
BlnI	CCTAGG	1 cut(s)	526
BlsI	GCNGC	4 cut(s)	184, 251, 290, 631
BmcAI	AGTACT	1 cut(s)	1012
Bme1390I	CCNGG	6 cut(s)	193, 309, 347, 432, 518, 551
Bme18I	GGWCC	2 cut(s)	743, 852
BmeT110I	CYCGRG	1 cut(s)	1226
BmgBI	CACGTC	1 cut(s)	241
BmgT120I	GGNCC	7 cut(s)	76, 311, 650, 743, 852, 1022, 1158
BmiI	GGNNCC	7 cut(s)	253, 424, 643, 801, 853, 1023, 1159
BmrFI	CCNGG	6 cut(s)	193, 309, 347, 432, 518, 551
BmrI	ACTGGG	1 cut(s)	448
BmsI	GCATC	2 cut(s)	859, 1201
BmuI	ACTGGG	1 cut(s)	448
BpiI	GAAGAC	1 cut(s)	1164
Bpu14I	TTCGAA	1 cut(s)	1109
BpuMI	CCSGG	4 cut(s)	309, 347, 432, 551
BsaAI	YACGTR	1 cut(s)	333
BsaBI	GATNNNNATC	1 cut(s)	1181
BsaHI	GRCGYC	1 cut(s)	675
BsaJI	CCNNGG	5 cut(s)	175, 375, 526, 1166, 1267
BsaWI	WCCGGW	1 cut(s)	605
Bsc4I	CCNNNNNNNGG	6 cut(s)	73, 192, 362, 531, 556, 1167
Bse1I	ACTGG	1 cut(s)	454
Bse3DI	GCAATG	1 cut(s)	316
Bse8I	GATNNNNATC	1 cut(s)	1181
BseBI	CCWGG	2 cut(s)	193, 518
BseDI	CCNNGG	5 cut(s)	175, 375, 526, 1166, 1267
BseGI	GGATG	2 cut(s)	874, 1069
BseJI	GATNNNNATC	1 cut(s)	1181
BseLI	CCNNNNNNNGG	6 cut(s)	73, 192, 362, 531, 556, 1167
BseMI	GCAATG	1 cut(s)	316
BseNI	ACTGG	1 cut(s)	454
BseRI	GAGGAG	5 cut(s)	104, 214, 380, 437, 1134
BseXI	GCAGC	2 cut(s)	194, 641
BsgI	GTGCAG	2 cut(s)	187, 648
Bsh1236I	CGCG	2 cut(s)	386, 724
Bsh1285I	CGRYCG	1 cut(s)	1038
BshFI	GGCC	8 cut(s)	77, 312, 371, 495, 516, 652, 1024, 1160
BshNI	GGYRCC	1 cut(s)	799
BsiEI	CGRYCG	1 cut(s)	1038
BsiHKAI	GWGCWC	1 cut(s)	338
BsiHKCI	CYCGRG	1 cut(s)	1226
BsiSI	CCGG	8 cut(s)	74, 309, 347, 363, 431, 551, 606, 840
BslFI	GGGAC	2 cut(s)	227, 865
BslI	CCNNNNNNNGG	6 cut(s)	73, 192, 362, 531, 556, 1167
BsmAI	GTCTC	3 cut(s)	364, 605, 682
BsmBI	CGTCTC	1 cut(s)	682
BsmFI	GGGAC	2 cut(s)	227, 865
BsnI	GGCC	8 cut(s)	77, 312, 371, 495, 516, 652, 1024, 1160
BsoBI	CYCGRG	1 cut(s)	1226
Bsp119I	TTCGAA	1 cut(s)	1109
Bsp1286I	GDGCHC	1 cut(s)	338
Bsp143I	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
BspANI	GGCC	8 cut(s)	77, 312, 371, 495, 516, 652, 1024, 1160
BspFNI	CGCG	2 cut(s)	386, 724
BspHI	TCATGA	2 cut(s)	45, 1179
BspLI	GGNNCC	7 cut(s)	253, 424, 643, 801, 853, 1023, 1159
BspMI	ACCTGC	1 cut(s)	547
BspPI	GGATC	2 cut(s)	636, 649
BspT104I	TTCGAA	1 cut(s)	1109
BspT107I	GGYRCC	1 cut(s)	799
BsrBI	CCGCTC	1 cut(s)	428
BsrDI	GCAATG	1 cut(s)	316
BsrI	ACTGG	1 cut(s)	454
BssECI	CCNNGG	5 cut(s)	175, 375, 526, 1166, 1267
BssMI	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
BssNI	GRCGYC	1 cut(s)	675
BssSI	CACGAG	3 cut(s)	466, 952, 1014
BssT1I	CCWWGG	3 cut(s)	375, 526, 1267
Bst2BI	CACGAG	3 cut(s)	466, 952, 1014
Bst2UI	CCWGG	2 cut(s)	193, 518
Bst4CI	ACNGT	5 cut(s)	730, 799, 883, 1039, 1154
Bst6I	CTCTTC	2 cut(s)	484, 489
BstACI	GRCGYC	1 cut(s)	675
BstBAI	YACGTR	1 cut(s)	333
BstBI	TTCGAA	1 cut(s)	1109
BstC8I	GCNNGC	3 cut(s)	286, 314, 1026
BstDEI	CTNAG	1 cut(s)	637
BstF5I	GGATG	2 cut(s)	874, 1069
BstFNI	CGCG	2 cut(s)	386, 724
BstH2I	RGCGCY	1 cut(s)	89
BstHHI	GCGC	6 cut(s)	88, 182, 323, 388, 556, 726
BstKTI	GATC	7 cut(s)	93, 644, 832, 1045, 1179, 1185, 1225
BstMAI	GTCTC	3 cut(s)	364, 605, 682
BstMBI	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
BstMCI	CGRYCG	1 cut(s)	1038
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 294, 313, 318, 626, 1025
BstNI	CCWGG	2 cut(s)	193, 518
BstSCI	CCNGG	6 cut(s)	191, 307, 345, 430, 516, 549
BstUI	CGCG	2 cut(s)	386, 724
BstV1I	GCAGC	2 cut(s)	194, 641
BstV2I	GAAGAC	1 cut(s)	1164
BstX2I	RGATCY	1 cut(s)	641
BstYI	RGATCY	1 cut(s)	641
BsuRI	GGCC	8 cut(s)	77, 312, 371, 495, 516, 652, 1024, 1160
BtrI	CACGTC	1 cut(s)	241
BtsCI	GGATG	2 cut(s)	874, 1069
BveI	ACCTGC	1 cut(s)	547
Cac8I	GCNNGC	3 cut(s)	286, 314, 1026
CciI	TCATGA	2 cut(s)	45, 1179
CfoI	GCGC	6 cut(s)	88, 182, 323, 388, 556, 726
Cfr13I	GGNCC	7 cut(s)	76, 311, 650, 743, 852, 1022, 1158
CseI	GACGC	1 cut(s)	404
Csp6I	GTAC	2 cut(s)	877, 1011
CviAII	CATG	2 cut(s)	46, 1180
CviQI	GTAC	2 cut(s)	877, 1011
DdeI	CTNAG	1 cut(s)	637
DpnI	GATC	7 cut(s)	92, 643, 831, 1044, 1178, 1184, 1224
DpnII	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
Eam1104I	CTCTTC	2 cut(s)	484, 489
EarI	CTCTTC	2 cut(s)	484, 489
Eco130I	CCWWGG	3 cut(s)	375, 526, 1267
Eco147I	AGGCCT	1 cut(s)	495
Eco32I	GATATC	1 cut(s)	1003
Eco47I	GGWCC	2 cut(s)	743, 852
Eco57I	CTGAAG	1 cut(s)	1284
Eco72I	CACGTG	1 cut(s)	333
Eco88I	CYCGRG	1 cut(s)	1226
EcoO109I	RGGNCCY	2 cut(s)	650, 1022
EcoRI	GAATTC	1 cut(s)	1090
EcoRII	CCWGG	2 cut(s)	191, 516
EcoRV	GATATC	1 cut(s)	1003
EcoT14I	CCWWGG	3 cut(s)	375, 526, 1267
ErhI	CCWWGG	3 cut(s)	375, 526, 1267
Esp3I	CGTCTC	1 cut(s)	682
FaeI	CATG	2 cut(s)	49, 1183
FaiI	YATR	4 cut(s)	47, 741, 779, 1181
FalI	AAGNNNNNCTT	2 cut(s)	359, 391
FaqI	GGGAC	2 cut(s)	227, 865
FatI	CATG	2 cut(s)	45, 1179
FauI	CCCGC	4 cut(s)	321, 842, 921, 1012
FbaI	TGATCA	1 cut(s)	829
FblI	GTMKAC	1 cut(s)	436
Fnu4HI	GCNGC	4 cut(s)	183, 250, 289, 630
FokI	GGATG	2 cut(s)	881, 1076
Fsp4HI	GCNGC	4 cut(s)	183, 250, 289, 630
FspBI	CTAG	2 cut(s)	401, 527
GlaI	GCGC	6 cut(s)	87, 181, 322, 387, 555, 725
GluI	GCNGC	4 cut(s)	183, 250, 289, 630
HaeII	RGCGCY	1 cut(s)	89
HaeIII	GGCC	8 cut(s)	77, 312, 371, 495, 516, 652, 1024, 1160
HapII	CCGG	8 cut(s)	74, 309, 347, 363, 431, 551, 606, 840
HgaI	GACGC	1 cut(s)	404
HhaI	GCGC	6 cut(s)	88, 182, 323, 388, 556, 726
Hin1I	GRCGYC	1 cut(s)	675
Hin1II	CATG	2 cut(s)	49, 1183
Hin6I	GCGC	6 cut(s)	86, 180, 321, 386, 554, 724
HinP1I	GCGC	6 cut(s)	86, 180, 321, 386, 554, 724
HincII	GTYRAC	4 cut(s)	437, 511, 787, 861
HindII	GTYRAC	4 cut(s)	437, 511, 787, 861
HinfI	GANTC	6 cut(s)	266, 438, 836, 932, 1078, 1229
HpaI	GTTAAC	1 cut(s)	861
HpaII	CCGG	8 cut(s)	74, 309, 347, 363, 431, 551, 606, 840
HphI	GGTGA	2 cut(s)	181, 979
Hpy166II	GTNNAC	6 cut(s)	437, 511, 787, 861, 879, 1150
Hpy188I	TCNGA	3 cut(s)	751, 1035, 1187
Hpy188III	TCNNGA	8 cut(s)	46, 833, 952, 1006, 1048, 1102, 1180, 1226
Hpy8I	GTNNAC	6 cut(s)	437, 511, 787, 861, 879, 1150
Hpy99I	CGWCG	4 cut(s)	398, 422, 677, 755
HpyAV	CCTTC	7 cut(s)	15, 43, 66, 196, 472, 525, 756
HpyCH4III	ACNGT	5 cut(s)	730, 799, 883, 1039, 1154
HpyCH4IV	ACGT	5 cut(s)	240, 332, 675, 815, 857
HpyCH4V	TGCA	3 cut(s)	204, 629, 1216
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 294, 313, 318, 626, 1025
HpyF3I	CTNAG	1 cut(s)	637
HpySE526I	ACGT	5 cut(s)	240, 332, 675, 815, 857
Hsp92I	GRCGYC	1 cut(s)	675
Hsp92II	CATG	2 cut(s)	49, 1183
HspAI	GCGC	6 cut(s)	86, 180, 321, 386, 554, 724
Ksp22I	TGATCA	1 cut(s)	829
KspAI	GTTAAC	1 cut(s)	861
Kzo9I	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
LmnI	GCTCC	7 cut(s)	168, 257, 393, 428, 433, 877, 1269
Lsp1109I	GCAGC	2 cut(s)	194, 641
LweI	GCATC	2 cut(s)	859, 1201
MaeI	CTAG	2 cut(s)	401, 527
MaeII	ACGT	5 cut(s)	240, 332, 675, 815, 857
MaeIII	GTNAC	1 cut(s)	718
MalI	GATC	7 cut(s)	92, 643, 831, 1044, 1178, 1184, 1224
MbiI	CCGCTC	1 cut(s)	428
MboI	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
MboII	GAAGA	6 cut(s)	14, 471, 476, 892, 1123, 1164
MflI	RGATCY	1 cut(s)	641
MhlI	GDGCHC	1 cut(s)	338
MluCI	AATT	4 cut(s)	1090, 1217, 1291, 1312
MlyI	GAGTC	3 cut(s)	260, 432, 1238
MmeI	TCCRAC	3 cut(s)	175, 774, 1058
MroXI	GAANNNNTTC	2 cut(s)	974, 1090
MseI	TTAA	5 cut(s)	663, 806, 821, 860, 1311
MslI	CAYNNNNRTG	2 cut(s)	731, 884
MspA1I	CMGCKG	1 cut(s)	703
MspI	CCGG	8 cut(s)	74, 309, 347, 363, 431, 551, 606, 840
MspR9I	CCNGG	6 cut(s)	193, 309, 347, 432, 518, 551
MvaI	CCWGG	2 cut(s)	193, 518
MvnI	CGCG	2 cut(s)	386, 724
MwoI	GCNNNNNNNGC	6 cut(s)	83, 294, 313, 318, 626, 1025
NciI	CCSGG	4 cut(s)	309, 347, 432, 551
NdeII	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
NlaIII	CATG	2 cut(s)	49, 1183
NlaIV	GGNNCC	7 cut(s)	253, 424, 643, 801, 853, 1023, 1159
NmeAIII	GCCGAG	1 cut(s)	156
NmuCI	GTSAC	1 cut(s)	718
NspV	TTCGAA	1 cut(s)	1109
OliI	CACNNNNGTG	1 cut(s)	731
PaeR7I	CTCGAG	1 cut(s)	1226
PagI	TCATGA	2 cut(s)	45, 1179
PceI	AGGCCT	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	2 cut(s)	390, 872
PdmI	GAANNNNTTC	2 cut(s)	974, 1090
PfeI	GAWTC	3 cut(s)	836, 932, 1078
PkrI	GCNGC	4 cut(s)	184, 251, 290, 631
PleI	GAGTC	3 cut(s)	260, 432, 1237
PmaCI	CACGTG	1 cut(s)	333
PmlI	CACGTG	1 cut(s)	333
PpsI	GAGTC	3 cut(s)	260, 432, 1237
Ppu21I	YACGTR	1 cut(s)	333
Psp6I	CCWGG	2 cut(s)	191, 516
PspCI	CACGTG	1 cut(s)	333
PspGI	CCWGG	2 cut(s)	191, 516
PspN4I	GGNNCC	7 cut(s)	253, 424, 643, 801, 853, 1023, 1159
PspPI	GGNCC	7 cut(s)	76, 311, 650, 743, 852, 1022, 1158
PsuI	RGATCY	1 cut(s)	641
RsaI	GTAC	2 cut(s)	878, 1012
RsaNI	GTAC	2 cut(s)	877, 1011
RseI	CAYNNNNRTG	2 cut(s)	731, 884
SalI	GTCGAC	1 cut(s)	435
SaqAI	TTAA	5 cut(s)	663, 806, 821, 860, 1311
SatI	GCNGC	4 cut(s)	183, 250, 289, 630
Sau3AI	GATC	7 cut(s)	90, 641, 829, 1042, 1176, 1182, 1222
Sau96I	GGNCC	7 cut(s)	76, 311, 650, 743, 852, 1022, 1158
ScaI	AGTACT	1 cut(s)	1012
SchI	GAGTC	3 cut(s)	260, 432, 1238
ScrFI	CCNGG	6 cut(s)	193, 309, 347, 432, 518, 551
SduI	GDGCHC	1 cut(s)	338
SfaNI	GCATC	2 cut(s)	859, 1201
Sfr274I	CTCGAG	1 cut(s)	1226
SfuI	TTCGAA	1 cut(s)	1109
SinI	GGWCC	2 cut(s)	743, 852
SlaI	CTCGAG	1 cut(s)	1226
SmiMI	CAYNNNNRTG	2 cut(s)	731, 884
SmlI	CTYRAG	1 cut(s)	1226
SmoI	CTYRAG	1 cut(s)	1226
Sse9I	AATT	4 cut(s)	1090, 1217, 1291, 1312
SseBI	AGGCCT	1 cut(s)	495
SspMI	CTAG	2 cut(s)	401, 527
StuI	AGGCCT	1 cut(s)	495
StyD4I	CCNGG	6 cut(s)	191, 307, 345, 430, 516, 549
StyI	CCWWGG	3 cut(s)	375, 526, 1267
TaaI	ACNGT	5 cut(s)	730, 799, 883, 1039, 1154
TaiI	ACGT	5 cut(s)	243, 335, 678, 818, 860
TaqI	TCGA	8 cut(s)	171, 198, 393, 436, 672, 1109, 1175, 1227
TaqII	GACCGA	1 cut(s)	601
TasI	AATT	4 cut(s)	1090, 1217, 1291, 1312
TatI	WGTACW	1 cut(s)	1010
TauI	GCSGC	2 cut(s)	252, 291
TfiI	GAWTC	3 cut(s)	836, 932, 1078
Tru1I	TTAA	5 cut(s)	663, 806, 821, 860, 1311
Tru9I	TTAA	5 cut(s)	663, 806, 821, 860, 1311
TseFI	GTSAC	1 cut(s)	718
TseI	GCWGC	2 cut(s)	182, 629
Tsp45I	GTSAC	1 cut(s)	718
TspDTI	ATGAA	2 cut(s)	34, 751
TspGWI	ACGGA	2 cut(s)	864, 881
VpaK11BI	GGWCC	2 cut(s)	743, 852
XapI	RAATTY	1 cut(s)	1090
XhoI	CTCGAG	1 cut(s)	1226
XmaJI	CCTAGG	1 cut(s)	526
XmiI	GTMKAC	1 cut(s)	436
XmnI	GAANNNNTTC	2 cut(s)	974, 1090
XspI	CTAG	2 cut(s)	401, 527
ZraI	GACGTC	1 cut(s)	676
ZrmI	AGTACT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.