pycom15g04560

3-ketoacyl-CoA synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0015128
Physical Location & Seq
Reverse (-)
2722088 .. 2724965
2878 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1512 bp
ATGCCAATCCCACCCACCATGGCCAGTGAGCAAGATCTCCTGTCCACTGAGATCGTCAACCGTGGGGTTGAGTCGTCCGGCCCCAATGCTGGCTCCCTCACGTTCTCCGTTAGAGTGCGCAGGCGGCTGCCGGACTTTTTACATTCCGTAAACCTAAAATATGTGAAGTTGGGGTACCACCACCTCATCAACCATGCCATATACTTGGCCACCATCCCTGTGCTTGTGCTGGTTTTTAGTGCTGAGGTGGGAAGTTTGAGTAGGGAGGAGCTGTGGAAGAAGCTTTGGGATGATGCACGTTATGACCTAGCAACCGTCTCTAAGGAACAATTCATAGAGGTAGCAAGAAAATCGGGCAAATTCGACGAGGCGAGCCTAGAATTCCAAAAGAGAATTCTAAATTCATCAGGCTTAGGAGACGAGACCTGCATCCCAAAATCCGTTATCATGTCGACGGAAAACACGGCAACCATGAAAGAAGGCCGAGCTGAGGCCTCAATGGTCATGTTTGGGGCACTCGACGAGCTCTTTGAAAAGACTAGGGTCCGTCCGAAGGACGTAGGAGTCCTAGTAGTAAATTGTAGCATCTTCAATCCCACACCCTCATTGTCTGCAATGATCATAAATCACTACAAAATGAGAGGCAACATTTTGAGCTACAATTTGGGTGGAATGGGGTGCAGTGCCGGAATCATAGCCGTTGATCTGGCTAGAGACATGCTTCAAGCCAACCCTAATAATTATGCTGTTGTGGTGAGTACTGAGAGTGTGGGGTATAATTGGTACCCTGGTAATGACAGGTCCATGCTCATTCCGAATTGCTTTTTTAGAATGGGATGCTCCGCTGTGTTGCTGTCCAATCGCCGCCGCGATTATCACCGTGCCAAGTACCGGCTGGAACACATTGTTCGGACACATAAAGGCGCTGATGATCGGAGTTTCAGGTGCGTGTACCAAGAGGAAGATGAACAAAGATTGAAGGGGCTGAAGATCAGCAAAGACCTAATTGAAATTGGTGGTGATGCCTTGAAAACCAACATCACCACATTGGGGCCGTTAGTGCTGCCTTTCTCTGAGCAGCTCCTCTTCTTTGCCACATTAGTTTCAAGGCACCTGTTTTCCAGGGGAGGCACTTCGGAGTTATCTTTAGCGTCACGCAAGAGACCCTACATTCCGGACTTCAAGCTGGCTTTCGAGCGCTTTTGTGTGCATGCAGCGAGCAAGACTGTGCTCGACGAGCTGCAGAGGAACCTCGAGCTGAGTGAGGAAAACATGGAGGCCTCTAGGATGACGCTACACCGCTTTGGAAACACGTCGAGCAGCAGCATATGGTATGAGTTGGCTTATTTGGAAGCAAAAGAGAAGGTGAAGAGAGGAGATAGGGTTTGGCAGTTGTCATTTGGTTCTGGATTCAAATGCAACAGCATCGTTTGGCGGTCGATGCGCCACGTTAGGAAGTCCTCGAGGAATCCATGGCTTGACTGCATTGAAAAATACCCTGTGAATCTCTAA

Protein Analysis

504

Amino Acids

56.98

Weight (kDa)

9.1

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 105 - 371 4.4e-121 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 399 - 479 2.7e-13 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 401 - 481 3.4e-09 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015128)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26250
fragaria_vesca FvH4_2g36990
malus_domestica MD08G1046600.v1.1
prunus_persica Prupe.1G401500_v2.0.a1
pyrus_communis pycom08g03880 pycom15g04560
rosa_chinensis RchiOBHm_Chr6g0304771
rosa_laevigata RLG00000010951
rosa_multiflora Rmu_sc0003120.1_g000005
rosa_roxburghii Rroxscaffold_7G00163510
rosa_rugosa Rorug06G0334400
rosa_samantha Rh6AG446300 Rh6BG455300 Rh6CG459800 Rh6DG446600
rosa_wichuraiana Rw6G038830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 563
AbsI CCTCGAGG 1 cut(s) 1462
Acc16I TGCGCA 1 cut(s) 119
Acc36I ACCTGC 1 cut(s) 434
Acc65I GGTACC 2 cut(s) 174, 783
AccB1I GGYRCC 3 cut(s) 174, 783, 1110
AccI GTMKAC 1 cut(s) 452
AccII CGCG 1 cut(s) 870
AccIII TCCGGA 1 cut(s) 1174
AciI CCGC 6 cut(s) 124, 843, 865, 868, 1300, 1435
AcoI YGGCCR 2 cut(s) 21, 207
AcsI RAATTY 4 cut(s) 359, 380, 393, 400
AcuI CTGAAG 1 cut(s) 1007
AfaI GTAC 5 cut(s) 176, 760, 785, 890, 953
AfeI AGCGCT 1 cut(s) 1199
AfiI CCNNNNNNNGG 5 cut(s) 89, 490, 553, 891, 1050
AflIII ACRYGT 1 cut(s) 1311
AjiI CACGTC 1 cut(s) 1314
AjnI CCWGG 2 cut(s) 787, 1121
AjuI GAANNNNNNNTTGG 2 cut(s) 378, 410
AluBI AGCT 9 cut(s) 271, 283, 488, 526, 657, 1081, 1186, 1240, 1258
AluI AGCT 9 cut(s) 271, 283, 488, 526, 657, 1081, 1186, 1240, 1258
Alw21I GWGCWC 2 cut(s) 528, 1233
Alw26I GTCTC 5 cut(s) 322, 411, 416, 708, 1156
Ama87I CYCGRG 2 cut(s) 1253, 1462
Aor13HI TCCGGA 1 cut(s) 1174
Aor51HI AGCGCT 1 cut(s) 1199
AoxI GGCC 7 cut(s) 21, 79, 207, 481, 492, 1052, 1278
ApeKI GCWGC 7 cut(s) 127, 1063, 1078, 1214, 1240, 1320, 1323
ApoI RAATTY 4 cut(s) 359, 380, 393, 400
ArsI GACNNNNNNTTYG 2 cut(s) 512, 544
Asp718I GGTACC 2 cut(s) 174, 783
AspLEI GCGC 4 cut(s) 120, 926, 1200, 1446
AspS9I GGNCC 4 cut(s) 80, 544, 801, 1052
AsuHPI GGTGA 5 cut(s) 766, 869, 1031, 1033, 1378
AvaI CYCGRG 2 cut(s) 1253, 1462
AvaII GGWCC 2 cut(s) 544, 801
BaeGI GKGCMC 1 cut(s) 517
BaeI ACNNNNGTAYC 2 cut(s) 775, 808
BalI TGGCCA 2 cut(s) 23, 209
BanI GGYRCC 3 cut(s) 174, 783, 1110
BanII GRGCYC 1 cut(s) 528
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
Bbv12I GWGCWC 2 cut(s) 528, 1233
BbvCI CCTCAGC 2 cut(s) 243, 489
BbvI GCAGC 7 cut(s) 114, 1050, 1090, 1226, 1227, 1332, 1335
BccI CCATC 1 cut(s) 221
BceAI ACGGC 3 cut(s) 480, 683, 1039
BcgI CGANNNNNNTGC 4 cut(s) 333, 367, 1408, 1442
BciT130I CCWGG 2 cut(s) 789, 1123
BclI TGATCA 1 cut(s) 618
BcoDI GTCTC 5 cut(s) 322, 411, 416, 708, 1156
BfaI CTAG 6 cut(s) 308, 377, 540, 569, 711, 1284
BfmI CTRYAG 1 cut(s) 1241
BfoI RGCGCY 2 cut(s) 927, 1201
BfuAI ACCTGC 1 cut(s) 434
BglII AGATCT 1 cut(s) 34
BmcAI AGTACT 1 cut(s) 760
Bme1390I CCNGG 2 cut(s) 789, 1123
Bme18I GGWCC 2 cut(s) 544, 801
BmeT110I CYCGRG 2 cut(s) 1253, 1462
BmgBI CACGTC 1 cut(s) 1314
BmgT120I GGNCC 4 cut(s) 80, 544, 801, 1052
BmiI GGNNCC 8 cut(s) 82, 94, 176, 545, 785, 1053, 1112, 1250
BmrFI CCNGG 2 cut(s) 789, 1123
BmsI GCATC 7 cut(s) 283, 438, 594, 827, 1012, 1431, 1434
BoxI GACNNNNGTC 1 cut(s) 542
Bpu10I CCTNAGC 3 cut(s) 243, 412, 489
BsaI GGTCTC 2 cut(s) 416, 1156
BsaJI CCNNGG 5 cut(s) 18, 61, 787, 1122, 1472
BsaWI WCCGGW 1 cut(s) 1174
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 555, 585, 1368, 1398
Bsc4I CCNNNNNNNGG 5 cut(s) 89, 490, 553, 891, 1050
Bse118I RCCGGY 1 cut(s) 891
Bse1I ACTGG 1 cut(s) 24
Bse3DI GCAATG 1 cut(s) 621
BseAI TCCGGA 1 cut(s) 1174
BseBI CCWGG 2 cut(s) 789, 1123
BseDI CCNNGG 5 cut(s) 18, 61, 787, 1122, 1472
BseGI GGATG 5 cut(s) 213, 295, 429, 842, 1293
BseLI CCNNNNNNNGG 5 cut(s) 89, 490, 553, 891, 1050
BseMI GCAATG 1 cut(s) 621
BseMII CTCAG 6 cut(s) 39, 234, 480, 753, 1065, 1250
BseNI ACTGG 1 cut(s) 24
BseRI GAGGAG 3 cut(s) 281, 1073, 1389
BseSI GKGCMC 1 cut(s) 517
BseXI GCAGC 7 cut(s) 114, 1050, 1090, 1226, 1227, 1332, 1335
BsgI GTGCAG 1 cut(s) 700
Bsh1236I CGCG 1 cut(s) 870
Bsh1285I CGRYCG 1 cut(s) 1439
BshFI GGCC 7 cut(s) 23, 81, 209, 483, 494, 1054, 1280
BshNI GGYRCC 3 cut(s) 174, 783, 1110
BsiEI CGRYCG 1 cut(s) 1439
BsiHKAI GWGCWC 2 cut(s) 528, 1233
BsiHKCI CYCGRG 2 cut(s) 1253, 1462
BsiSI CCGG 5 cut(s) 78, 131, 687, 892, 1175
BslI CCNNNNNNNGG 5 cut(s) 89, 490, 553, 891, 1050
BsmAI GTCTC 5 cut(s) 322, 411, 416, 708, 1156
BsmBI CGTCTC 2 cut(s) 322, 411
BsnI GGCC 7 cut(s) 23, 81, 209, 483, 494, 1054, 1280
Bso31I GGTCTC 2 cut(s) 416, 1156
BsoBI CYCGRG 2 cut(s) 1253, 1462
Bsp1286I GDGCHC 3 cut(s) 517, 528, 1233
Bsp13I TCCGGA 1 cut(s) 1174
Bsp143I GATC 6 cut(s) 34, 51, 618, 703, 931, 990
Bsp19I CCATGG 2 cut(s) 18, 1472
BspACI CCGC 6 cut(s) 124, 843, 865, 868, 1300, 1435
BspANI GGCC 7 cut(s) 23, 81, 209, 483, 494, 1054, 1280
BspCNI CTCAG 6 cut(s) 40, 235, 481, 754, 1066, 1251
BspEI TCCGGA 1 cut(s) 1174
BspFNI CGCG 1 cut(s) 870
BspLI GGNNCC 8 cut(s) 82, 94, 176, 545, 785, 1053, 1112, 1250
BspMAI CTGCAG 1 cut(s) 1245
BspMI ACCTGC 1 cut(s) 434
BspT107I GGYRCC 3 cut(s) 174, 783, 1110
BspTNI GGTCTC 2 cut(s) 416, 1156
BsrDI GCAATG 1 cut(s) 621
BsrFI RCCGGY 1 cut(s) 891
BsrI ACTGG 1 cut(s) 24
BssAI RCCGGY 1 cut(s) 891
BssECI CCNNGG 5 cut(s) 18, 61, 787, 1122, 1472
BssMI GATC 6 cut(s) 34, 51, 618, 703, 931, 990
BssT1I CCWWGG 2 cut(s) 18, 1472
Bst2UI CCWGG 2 cut(s) 789, 1123
Bst4CI ACNGT 4 cut(s) 62, 316, 881, 1228
Bst6I CTCTTC 2 cut(s) 1091, 1364
BstC8I GCNNGC 6 cut(s) 91, 122, 373, 1188, 1212, 1219
BstDEI CTNAG 8 cut(s) 48, 243, 321, 412, 489, 762, 1074, 1259
BstDSI CCRYGG 3 cut(s) 18, 61, 1472
BstF5I GGATG 5 cut(s) 213, 295, 429, 842, 1293
BstFNI CGCG 1 cut(s) 870
BstH2I RGCGCY 2 cut(s) 927, 1201
BstHHI GCGC 4 cut(s) 120, 926, 1200, 1446
BstKTI GATC 6 cut(s) 37, 54, 621, 706, 934, 993
BstMAI GTCTC 5 cut(s) 322, 411, 416, 708, 1156
BstMBI GATC 6 cut(s) 34, 51, 618, 703, 931, 990
BstMCI CGRYCG 1 cut(s) 1439
BstMWI GCNNNNNNNGC 4 cut(s) 124, 1060, 1237, 1441
BstNI CCWGG 2 cut(s) 789, 1123
BstNSI RCATGY 2 cut(s) 721, 1214
BstPAI GACNNNNGTC 1 cut(s) 542
BstSCI CCNGG 2 cut(s) 787, 1121
BstSFI CTRYAG 1 cut(s) 1241
BstSLI GKGCMC 1 cut(s) 517
BstUI CGCG 1 cut(s) 870
BstV1I GCAGC 7 cut(s) 114, 1050, 1090, 1226, 1227, 1332, 1335
BstX2I RGATCY 1 cut(s) 34
BstXI CCANNNNNNTGG 1 cut(s) 205
BstYI RGATCY 1 cut(s) 34
BsuRI GGCC 7 cut(s) 23, 81, 209, 483, 494, 1054, 1280
BtgI CCRYGG 3 cut(s) 18, 61, 1472
BtrI CACGTC 1 cut(s) 1314
BtsCI GGATG 5 cut(s) 213, 295, 429, 842, 1293
BtsI GCAGTG 1 cut(s) 688
BtsIMutI CAGTG 3 cut(s) 31, 45, 688
BveI ACCTGC 1 cut(s) 434
Cac8I GCNNGC 6 cut(s) 91, 122, 373, 1188, 1212, 1219
CfoI GCGC 4 cut(s) 120, 926, 1200, 1446
Cfr10I RCCGGY 1 cut(s) 891
Cfr13I GGNCC 4 cut(s) 80, 544, 801, 1052
CseI GACGC 2 cut(s) 1140, 1300
Csp6I GTAC 5 cut(s) 175, 759, 784, 889, 952
CspCI CAANNNNNGTGG 2 cut(s) 649, 684
CviQI GTAC 5 cut(s) 175, 759, 784, 889, 952
DdeI CTNAG 8 cut(s) 48, 243, 321, 412, 489, 762, 1074, 1259
DpnI GATC 6 cut(s) 36, 53, 620, 705, 933, 992
DpnII GATC 6 cut(s) 34, 51, 618, 703, 931, 990
DrdI GACNNNNNNGTC 1 cut(s) 563
DseDI GACNNNNNNGTC 1 cut(s) 563
EaeI YGGCCR 2 cut(s) 21, 207
Eam1104I CTCTTC 2 cut(s) 1091, 1364
EarI CTCTTC 2 cut(s) 1091, 1364
Ecl136II GAGCTC 1 cut(s) 526
Eco130I CCWWGG 2 cut(s) 18, 1472
Eco147I AGGCCT 2 cut(s) 494, 1280
Eco24I GRGCYC 1 cut(s) 528
Eco31I GGTCTC 2 cut(s) 416, 1156
Eco47I GGWCC 2 cut(s) 544, 801
Eco47III AGCGCT 1 cut(s) 1199
Eco53kI GAGCTC 1 cut(s) 526
Eco57I CTGAAG 1 cut(s) 1007
Eco88I CYCGRG 2 cut(s) 1253, 1462
EcoICRI GAGCTC 1 cut(s) 526
EcoRI GAATTC 2 cut(s) 380, 393
EcoRII CCWGG 2 cut(s) 787, 1121
EcoT14I CCWWGG 2 cut(s) 18, 1472
EcoT38I GRGCYC 1 cut(s) 528
ErhI CCWWGG 2 cut(s) 18, 1472
Esp3I CGTCTC 2 cut(s) 322, 411
FauNDI CATATG 1 cut(s) 1328
FbaI TGATCA 1 cut(s) 618
FblI GTMKAC 1 cut(s) 452
FokI GGATG 5 cut(s) 200, 302, 416, 849, 1300
FriOI GRGCYC 1 cut(s) 528
FspBI CTAG 6 cut(s) 308, 377, 540, 569, 711, 1284
FspI TGCGCA 1 cut(s) 119
GlaI GCGC 4 cut(s) 119, 925, 1199, 1445
HaeII RGCGCY 2 cut(s) 927, 1201
HaeIII GGCC 7 cut(s) 23, 81, 209, 483, 494, 1054, 1280
HapII CCGG 5 cut(s) 78, 131, 687, 892, 1175
HgaI GACGC 2 cut(s) 1140, 1300
HhaI GCGC 4 cut(s) 120, 926, 1200, 1446
Hin6I GCGC 4 cut(s) 118, 924, 1198, 1444
HinP1I GCGC 4 cut(s) 118, 924, 1198, 1444
HincII GTYRAC 2 cut(s) 58, 453
HindII GTYRAC 2 cut(s) 58, 453
HindIII AAGCTT 1 cut(s) 281
HinfI GANTC 6 cut(s) 71, 564, 690, 1410, 1468, 1504
HpaII CCGG 5 cut(s) 78, 131, 687, 892, 1175
HphI GGTGA 5 cut(s) 766, 869, 1031, 1033, 1378
Hpy166II GTNNAC 5 cut(s) 45, 58, 151, 453, 952
Hpy188I TCNGA 6 cut(s) 552, 816, 912, 936, 1075, 1138
Hpy188III TCNNGA 2 cut(s) 1175, 1407
Hpy8I GTNNAC 5 cut(s) 45, 58, 151, 453, 952
Hpy99I CGWCG 5 cut(s) 368, 457, 524, 1238, 1318
HpyAV CCTTC 4 cut(s) 473, 547, 973, 1357
HpyCH4III ACNGT 4 cut(s) 62, 316, 881, 1228
HpyCH4IV ACGT 5 cut(s) 101, 298, 558, 1313, 1449
HpyCH4V TGCA 9 cut(s) 296, 429, 614, 681, 1210, 1214, 1243, 1419, 1485
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 1060, 1237, 1441
HpyF3I CTNAG 8 cut(s) 48, 243, 321, 412, 489, 762, 1074, 1259
HpySE526I ACGT 5 cut(s) 101, 298, 558, 1313, 1449
HspAI GCGC 4 cut(s) 118, 924, 1198, 1444
Kpn2I TCCGGA 1 cut(s) 1174
KpnI GGTACC 2 cut(s) 178, 787
Ksp22I TGATCA 1 cut(s) 618
Kzo9I GATC 6 cut(s) 34, 51, 618, 703, 931, 990
LmnI GCTCC 4 cut(s) 98, 268, 845, 1086
Lsp1109I GCAGC 7 cut(s) 114, 1050, 1090, 1226, 1227, 1332, 1335
LweI GCATC 7 cut(s) 283, 438, 594, 827, 1012, 1431, 1434
MaeI CTAG 6 cut(s) 308, 377, 540, 569, 711, 1284
MaeII ACGT 5 cut(s) 101, 298, 558, 1313, 1449
MaeIII GTNAC 1 cut(s) 1152
MalI GATC 6 cut(s) 36, 53, 620, 705, 933, 992
MboI GATC 6 cut(s) 34, 51, 618, 703, 931, 990
MboII GAAGA 6 cut(s) 289, 580, 974, 1000, 1078, 1381
MflI RGATCY 1 cut(s) 34
MhlI GDGCHC 3 cut(s) 517, 528, 1233
MlsI TGGCCA 2 cut(s) 23, 209
MluNI TGGCCA 2 cut(s) 23, 209
MlyI GAGTC 2 cut(s) 80, 573
Mox20I TGGCCA 2 cut(s) 23, 209
MroI TCCGGA 1 cut(s) 1174
MscI TGGCCA 2 cut(s) 23, 209
MslI CAYNNNNRTG 1 cut(s) 218
Msp20I TGGCCA 2 cut(s) 23, 209
MspA1I CMGCKG 1 cut(s) 845
MspI CCGG 5 cut(s) 78, 131, 687, 892, 1175
MspR9I CCNGG 2 cut(s) 789, 1123
MvaI CCWGG 2 cut(s) 789, 1123
MvnI CGCG 1 cut(s) 870
MwoI GCNNNNNNNGC 4 cut(s) 124, 1060, 1237, 1441
NcoI CCATGG 2 cut(s) 18, 1472
NdeI CATATG 1 cut(s) 1328
NdeII GATC 6 cut(s) 34, 51, 618, 703, 931, 990
NlaIV GGNNCC 8 cut(s) 82, 94, 176, 545, 785, 1053, 1112, 1250
NmeAIII GCCGAG 1 cut(s) 509
NmuCI GTSAC 1 cut(s) 1152
NsbI TGCGCA 1 cut(s) 119
NspI RCATGY 2 cut(s) 721, 1214
PaeI GCATGC 1 cut(s) 1214
PaeR7I CTCGAG 2 cut(s) 1253, 1462
PceI AGGCCT 2 cut(s) 494, 1280
PfeI GAWTC 4 cut(s) 690, 1410, 1468, 1504
PleI GAGTC 2 cut(s) 79, 572
PpsI GAGTC 2 cut(s) 79, 572
PshAI GACNNNNGTC 1 cut(s) 542
Psp124BI GAGCTC 1 cut(s) 528
Psp6I CCWGG 2 cut(s) 787, 1121
PspGI CCWGG 2 cut(s) 787, 1121
PspN4I GGNNCC 8 cut(s) 82, 94, 176, 545, 785, 1053, 1112, 1250
PspPI GGNCC 4 cut(s) 80, 544, 801, 1052
PspXI VCTCGAGB 2 cut(s) 1253, 1462
PstI CTGCAG 1 cut(s) 1245
PsuI RGATCY 1 cut(s) 34
RsaI GTAC 5 cut(s) 176, 760, 785, 890, 953
RsaNI GTAC 5 cut(s) 175, 759, 784, 889, 952
RseI CAYNNNNRTG 1 cut(s) 218
SacI GAGCTC 1 cut(s) 528
SalI GTCGAC 1 cut(s) 451
Sau3AI GATC 6 cut(s) 34, 51, 618, 703, 931, 990
Sau96I GGNCC 4 cut(s) 80, 544, 801, 1052
ScaI AGTACT 1 cut(s) 760
SchI GAGTC 2 cut(s) 80, 573
ScrFI CCNGG 2 cut(s) 789, 1123
SduI GDGCHC 3 cut(s) 517, 528, 1233
SfaNI GCATC 7 cut(s) 283, 438, 594, 827, 1012, 1431, 1434
SfcI CTRYAG 1 cut(s) 1241
Sfr274I CTCGAG 2 cut(s) 1253, 1462
SinI GGWCC 2 cut(s) 544, 801
SlaI CTCGAG 2 cut(s) 1253, 1462
SmiMI CAYNNNNRTG 1 cut(s) 218
SmlI CTYRAG 2 cut(s) 1253, 1462
SmoI CTYRAG 2 cut(s) 1253, 1462
SphI GCATGC 1 cut(s) 1214
SseBI AGGCCT 2 cut(s) 494, 1280
SsiI CCGC 6 cut(s) 124, 843, 865, 868, 1300, 1435
SspMI CTAG 6 cut(s) 308, 377, 540, 569, 711, 1284
SstI GAGCTC 1 cut(s) 528
StuI AGGCCT 2 cut(s) 494, 1280
StyD4I CCNGG 2 cut(s) 787, 1121
StyI CCWWGG 2 cut(s) 18, 1472
TaaI ACNGT 4 cut(s) 62, 316, 881, 1228
TaiI ACGT 5 cut(s) 104, 301, 561, 1316, 1452
TaqI TCGA 9 cut(s) 363, 452, 519, 1194, 1233, 1254, 1316, 1439, 1463
TatI WGTACW 1 cut(s) 758
TauI GCSGC 3 cut(s) 127, 867, 870
TfiI GAWTC 4 cut(s) 690, 1410, 1468, 1504
TscAI CASTG 3 cut(s) 31, 52, 688
TseFI GTSAC 1 cut(s) 1152
TseI GCWGC 7 cut(s) 127, 1063, 1078, 1214, 1240, 1320, 1323
Tsp45I GTSAC 1 cut(s) 1152
TspDTI ATGAA 4 cut(s) 322, 393, 488, 981
TspGWI ACGGA 5 cut(s) 97, 136, 430, 470, 536
TspRI CASTG 3 cut(s) 31, 52, 688
VpaK11BI GGWCC 2 cut(s) 544, 801
XapI RAATTY 4 cut(s) 359, 380, 393, 400
XceI RCATGY 2 cut(s) 721, 1214
XcmI CCANNNNNNNNNTGG 1 cut(s) 892
XhoI CTCGAG 2 cut(s) 1253, 1462
XmiI GTMKAC 1 cut(s) 452
XspI CTAG 6 cut(s) 308, 377, 540, 569, 711, 1284
ZrmI AGTACT 1 cut(s) 760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.