Rh6AG446300

3-ketoacyl-CoA synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0015128
Physical Location & Seq
Reverse (-)
63319833 .. 63322313
2481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG446300.1

Sequence Viewer

Length: 1626 bp
ATGTCAGTTATCCCATCAGACATGGCCAGTGAGAGAGATCTCTTGTCCACTGAGATCGTCAACCGTGGGATCGAGTCCTCCGGCCCCAATGCCGGATCGCTCACGTTCTCCGTCAGGGTCCGGAGGCGGCTGCCGGACTTTCTCCAATCGGTGAACCTTAAGTACGTCAAGTTGGGCTACCACCACCTCATCAACAATGCTATATACCTGGCCACCATACCCTTTCTGGTCGTGGTTTTCAGTGCTGAGGTTGGGAGTCTCAGTAGGGAGGAGCTGTGGAAGAAGCTCTGGTTTGATGCGCGTTATGATCTTGCAACCGTGCTTGGTTTCTTTGGGGTCTTTGTGTTCACCTTGTCTGTATACTTCATGTCACGCCCTCGCTCCATCTACCTCATTGATTTTGCTTGCTTTCGCCCTAGCGACGATCTAAAGGTGTCAAAGGAGCAATTCATAGAGCTAGCAAGAAAATCAGGCAAGTTTGATGAACCGAGCCTCGAATTCCAGACTCGAATTCTCAACTCATCAGGTTTAGGAGACGAAACCTACATCCCAAAGTCAGTGATCACCTCCACCGAGAACACTGCAACCATGAAAGAAGGTCGAGCCGAGGCCTCAATGGTGATGTTCGGAGCACTGGACGAGCTCTTCGAAAAGACCAAGGTCCGTCCCAAGGACGTAGGTGTTCTTGTGGTGAATTGCAGCGTATTCAATCCCACACCCTCCTTGTCCGCCATGATCATAAACCACTACAAGATGAGGGGCAACATTTTGAGCTACAATCTGGGCGGCATGGGGTGCAGCGCTGGGATCATAGCCGTTGATTTGGCTAGGGACATGCTTCAGGCAAACCCCAACAACTATGCTGTGGTGGTAAGCACTGAGATGGTGGGATATAATTGGTACCCGGGCAGTGACAGGTCTATGCTCATTCCCAACTGTTTCTTCCGCATGGGTTGCTCAGCCGTGCTTCTCTCCAATCGCCGCCGTGACTACCACCGTGCCAAGTATCGCCTCGAACACATCGTTCGAACACATAAAGGCGCTGACGACCGTAGTTTCAGGTGTGTGTACCAAGAAGAAGATGAGCAAAGACTCAAGGGGCTAAAGATCAGCAAAGAGCTAGTGGAAATTGGTGGTGACGCACTGAAAACCAACATCACCACTCTCGGACCGCTAGTCCTGCCCTTCTCGGAGCAGCTCCTCTTTTTCGCTACATTGGTCTCGAGGCACTTGTTCAACAACGGAGCTTCACAGCCCTCTTTATCGTCAGGCAAGAGACCCTACATTCCCGATTTCAAGCTGGCATTTGAGTGCTTCTGCGTGCACTCCGCGAGCAAGACTGTGCTGGATGAGCTGCAGAGAAACCTCGAGCTCAGCGACGAGAACATGGAGGCATCGAGGATGACACTGCACCGATTTGGTAACACTTCGAGCAGTAGCATATGGTATGAGCTGGCTTACATGGAAGCAAAAGAGAAAGTGAAGAGAGGAGACCGAGTTTGGCAGTTGGCGTTCGGGTCTGGATTCAAGTGCAACAGCATTGTTTGGCGGTCCATGCGCCGGGTTAGGAAGCCTTCAAGGAATCCATGGCTTGACTGCATTGAAAGATACCCAATCATGAATTGA

Protein Analysis

541

Amino Acids

61.44

Weight (kDa)

9.05

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 121 - 410 2.2e-132 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 437 - 517 2.5e-13 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 439 - 519 1.1e-09 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015128)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26250
fragaria_vesca FvH4_2g36990
malus_domestica MD08G1046600.v1.1
prunus_persica Prupe.1G401500_v2.0.a1
pyrus_communis pycom08g03880 pycom15g04560
rosa_chinensis RchiOBHm_Chr6g0304771
rosa_laevigata RLG00000010951
rosa_multiflora Rmu_sc0003120.1_g000005
rosa_roxburghii Rroxscaffold_7G00163510
rosa_rugosa Rorug06G0334400
rosa_samantha Rh6AG446300 Rh6BG455300 Rh6CG459800 Rh6DG446600
rosa_wichuraiana Rw6G038830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 900
AccB1I GGYRCC 1 cut(s) 900
AccI GTMKAC 1 cut(s) 360
AccII CGCG 2 cut(s) 301, 1331
AccIII TCCGGA 1 cut(s) 120
AciI CCGC 8 cut(s) 127, 729, 786, 946, 982, 1172, 1329, 1549
AclWI GGATC 3 cut(s) 77, 103, 815
AcoI YGGCCR 2 cut(s) 24, 210
AcsI RAATTY 2 cut(s) 497, 510
AcuI CTGAAG 1 cut(s) 824
AfaI GTAC 3 cut(s) 164, 902, 1070
AfeI AGCGCT 1 cut(s) 802
AfiI CCNNNNNNNGG 3 cut(s) 92, 670, 1560
AflII CTTAAG 1 cut(s) 158
AgsI TTSAA 6 cut(s) 709, 1237, 1297, 1528, 1578, 1604
AhdI GACNNNNNGTC 1 cut(s) 1175
AjnI CCWGG 1 cut(s) 207
AjuI GAANNNNNNNTTGG 2 cut(s) 926, 958
Alw21I GWGCWC 4 cut(s) 634, 645, 1326, 1374
Alw26I GTCTC 5 cut(s) 263, 528, 1225, 1270, 1485
Alw44I GTGCAC 1 cut(s) 1322
AlwI GGATC 3 cut(s) 77, 103, 815
Ama87I CYCGRG 3 cut(s) 904, 1222, 1367
Aor13HI TCCGGA 1 cut(s) 120
Aor51HI AGCGCT 1 cut(s) 802
AoxI GGCC 4 cut(s) 24, 82, 210, 609
ApaLI GTGCAC 1 cut(s) 1322
ApeKI GCWGC 5 cut(s) 130, 699, 798, 1195, 1354
ApoI RAATTY 2 cut(s) 497, 510
ArsI GACNNNNNNTTYG 2 cut(s) 629, 661
Asp718I GGTACC 1 cut(s) 900
AspLEI GCGC 4 cut(s) 301, 803, 1043, 1560
AspS9I GGNCC 5 cut(s) 83, 118, 661, 1169, 1551
AsuC2I CCSGG 3 cut(s) 905, 906, 1562
AsuHPI GGTGA 7 cut(s) 163, 340, 556, 631, 703, 1148, 1150
AsuII TTCGAA 2 cut(s) 648, 1027
AsuNHI GCTAGC 1 cut(s) 457
AvaI CYCGRG 3 cut(s) 904, 1222, 1367
AvaII GGWCC 4 cut(s) 118, 661, 1169, 1551
BaeGI GKGCMC 1 cut(s) 1326
BalI TGGCCA 2 cut(s) 26, 212
BanI GGYRCC 1 cut(s) 900
BanII GRGCYC 2 cut(s) 645, 1374
Bbv12I GWGCWC 4 cut(s) 634, 645, 1326, 1374
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 5 cut(s) 117, 711, 810, 1207, 1341
BccI CCATC 3 cut(s) 22, 392, 877
BceAI ACGGC 3 cut(s) 800, 947, 969
BcgI CGANNNNNNTGC 2 cut(s) 563, 597
BciT130I CCWGG 1 cut(s) 209
BclI TGATCA 2 cut(s) 561, 735
BcnI CCSGG 3 cut(s) 905, 906, 1562
BcoDI GTCTC 5 cut(s) 263, 528, 1225, 1270, 1485
BfaI CTAG 5 cut(s) 417, 458, 828, 1121, 1175
BfmI CTRYAG 1 cut(s) 1355
BfoI RGCGCY 2 cut(s) 804, 1044
BfrI CTTAAG 1 cut(s) 158
BglII AGATCT 1 cut(s) 37
BisI GCNGC 8 cut(s) 128, 131, 700, 787, 799, 982, 1196, 1355
BlpI GCTNAGC 2 cut(s) 958, 1373
BlsI GCNGC 8 cut(s) 129, 132, 701, 788, 800, 983, 1197, 1356
Bme1390I CCNGG 4 cut(s) 209, 905, 906, 1562
Bme18I GGWCC 4 cut(s) 118, 661, 1169, 1551
BmeRI GACNNNNNGTC 1 cut(s) 1175
BmeT110I CYCGRG 3 cut(s) 904, 1222, 1367
BmgT120I GGNCC 5 cut(s) 83, 118, 661, 1169, 1551
BmiI GGNNCC 3 cut(s) 85, 119, 902
BmrFI CCNGG 4 cut(s) 209, 905, 906, 1562
BmsI GCATC 2 cut(s) 286, 1403
BmtI GCTAGC 1 cut(s) 461
BoxI GACNNNNGTC 1 cut(s) 659
Bpu10I CCTNAGC 1 cut(s) 246
Bpu1102I GCTNAGC 2 cut(s) 958, 1373
Bpu14I TTCGAA 2 cut(s) 648, 1027
BpuEI CTTGAG 1 cut(s) 1079
BpuMI CCSGG 3 cut(s) 905, 906, 1562
BsaI GGTCTC 3 cut(s) 1225, 1270, 1485
BsaJI CCNNGG 6 cut(s) 64, 606, 657, 669, 904, 1586
BsaWI WCCGGW 1 cut(s) 120
BsaXI ACNNNNNCTCC 6 cut(s) 247, 260, 277, 290, 1482, 1512
Bsc4I CCNNNNNNNGG 3 cut(s) 92, 670, 1560
Bse1I ACTGG 2 cut(s) 27, 639
BseAI TCCGGA 1 cut(s) 120
BseBI CCWGG 1 cut(s) 209
BseDI CCNNGG 6 cut(s) 64, 606, 657, 669, 904, 1586
BseGI GGATG 3 cut(s) 546, 1354, 1407
BseLI CCNNNNNNNGG 3 cut(s) 92, 670, 1560
BseMII CTCAG 6 cut(s) 42, 237, 274, 870, 972, 1387
BseNI ACTGG 2 cut(s) 27, 639
BseRI GAGGAG 3 cut(s) 284, 1190, 1503
BseSI GKGCMC 1 cut(s) 1326
BseXI GCAGC 5 cut(s) 117, 711, 810, 1207, 1341
BseYI CCCAGC 1 cut(s) 803
BsgI GTGCAG 2 cut(s) 817, 1394
Bsh1236I CGCG 2 cut(s) 301, 1331
Bsh1285I CGRYCG 1 cut(s) 1051
BshFI GGCC 4 cut(s) 26, 84, 212, 611
BshNI GGYRCC 1 cut(s) 900
BsiEI CGRYCG 1 cut(s) 1051
BsiHKAI GWGCWC 4 cut(s) 634, 645, 1326, 1374
BsiHKCI CYCGRG 3 cut(s) 904, 1222, 1367
BsiSI CCGG 6 cut(s) 81, 93, 121, 134, 905, 1561
BslFI GGGAC 2 cut(s) 651, 845
BslI CCNNNNNNNGG 3 cut(s) 92, 670, 1560
BsmAI GTCTC 5 cut(s) 263, 528, 1225, 1270, 1485
BsmBI CGTCTC 1 cut(s) 528
BsmFI GGGAC 2 cut(s) 651, 845
BsnI GGCC 4 cut(s) 26, 84, 212, 611
Bso31I GGTCTC 3 cut(s) 1225, 1270, 1485
BsoBI CYCGRG 3 cut(s) 904, 1222, 1367
Bsp119I TTCGAA 2 cut(s) 648, 1027
Bsp1286I GDGCHC 4 cut(s) 634, 645, 1326, 1374
Bsp13I TCCGGA 1 cut(s) 120
Bsp1720I GCTNAGC 2 cut(s) 958, 1373
Bsp19I CCATGG 1 cut(s) 1586
BspACI CCGC 8 cut(s) 127, 729, 786, 946, 982, 1172, 1329, 1549
BspANI GGCC 4 cut(s) 26, 84, 212, 611
BspCNI CTCAG 6 cut(s) 43, 238, 273, 871, 971, 1386
BspEI TCCGGA 1 cut(s) 120
BspFNI CGCG 2 cut(s) 301, 1331
BspHI TCATGA 1 cut(s) 1617
BspLI GGNNCC 3 cut(s) 85, 119, 902
BspMAI CTGCAG 1 cut(s) 1359
BspOI GCTAGC 1 cut(s) 461
BspPI GGATC 3 cut(s) 77, 103, 815
BspQI GCTCTTC 1 cut(s) 650
BspT104I TTCGAA 2 cut(s) 648, 1027
BspT107I GGYRCC 1 cut(s) 900
BspTI CTTAAG 1 cut(s) 158
BspTNI GGTCTC 3 cut(s) 1225, 1270, 1485
BsrI ACTGG 2 cut(s) 27, 639
BssECI CCNNGG 6 cut(s) 64, 606, 657, 669, 904, 1586
BssNAI GTATAC 1 cut(s) 361
BssT1I CCWWGG 3 cut(s) 657, 669, 1586
Bst1107I GTATAC 1 cut(s) 361
Bst2UI CCWGG 1 cut(s) 209
Bst4CI ACNGT 6 cut(s) 65, 319, 938, 998, 1052, 1342
Bst6I CTCTTC 2 cut(s) 650, 1478
BstAFI CTTAAG 1 cut(s) 158
BstAPI GCANNNNNTGC 2 cut(s) 795, 954
BstBI TTCGAA 2 cut(s) 648, 1027
BstC8I GCNNGC 6 cut(s) 406, 459, 1302, 1322, 1333, 1455
BstDEI CTNAG 6 cut(s) 51, 246, 260, 879, 958, 1373
BstDSI CCRYGG 2 cut(s) 64, 1586
BstF5I GGATG 3 cut(s) 546, 1354, 1407
BstFNI CGCG 2 cut(s) 301, 1331
BstH2I RGCGCY 2 cut(s) 804, 1044
BstHHI GCGC 4 cut(s) 301, 803, 1043, 1560
BstMAI GTCTC 5 cut(s) 263, 528, 1225, 1270, 1485
BstMCI CGRYCG 1 cut(s) 1051
BstMWI GCNNNNNNNGC 5 cut(s) 795, 954, 1180, 1351, 1555
BstNI CCWGG 1 cut(s) 209
BstNSI RCATGY 1 cut(s) 838
BstPAI GACNNNNGTC 1 cut(s) 659
BstSCI CCNGG 4 cut(s) 207, 903, 904, 1560
BstSFI CTRYAG 1 cut(s) 1355
BstSLI GKGCMC 1 cut(s) 1326
BstUI CGCG 2 cut(s) 301, 1331
BstV1I GCAGC 5 cut(s) 117, 711, 810, 1207, 1341
BstX2I RGATCY 1 cut(s) 37
BstYI RGATCY 1 cut(s) 37
BstZ17I GTATAC 1 cut(s) 361
BsuRI GGCC 4 cut(s) 26, 84, 212, 611
BtgI CCRYGG 2 cut(s) 64, 1586
BtsCI GGATG 3 cut(s) 546, 1354, 1407
BtsI GCAGTG 3 cut(s) 579, 916, 1406
Cac8I GCNNGC 6 cut(s) 406, 459, 1302, 1322, 1333, 1455
CciI TCATGA 1 cut(s) 1617
CfoI GCGC 4 cut(s) 301, 803, 1043, 1560
Cfr13I GGNCC 5 cut(s) 83, 118, 661, 1169, 1551
Cfr9I CCCGGG 1 cut(s) 904
CpoI CGGWCCG 1 cut(s) 1169
CseI GACGC 1 cut(s) 1148
Csp6I GTAC 3 cut(s) 163, 901, 1069
CspI CGGWCCG 1 cut(s) 1169
CviQI GTAC 3 cut(s) 163, 901, 1069
DdeI CTNAG 6 cut(s) 51, 246, 260, 879, 958, 1373
DriI GACNNNNNGTC 1 cut(s) 1175
EaeI YGGCCR 2 cut(s) 24, 210
Eam1104I CTCTTC 2 cut(s) 650, 1478
Eam1105I GACNNNNNGTC 1 cut(s) 1175
EarI CTCTTC 2 cut(s) 650, 1478
EciI GGCGGA 1 cut(s) 718
Ecl136II GAGCTC 2 cut(s) 643, 1372
Eco130I CCWWGG 3 cut(s) 657, 669, 1586
Eco147I AGGCCT 1 cut(s) 611
Eco24I GRGCYC 2 cut(s) 645, 1374
Eco31I GGTCTC 3 cut(s) 1225, 1270, 1485
Eco47I GGWCC 4 cut(s) 118, 661, 1169, 1551
Eco47III AGCGCT 1 cut(s) 802
Eco53kI GAGCTC 2 cut(s) 643, 1372
Eco57I CTGAAG 1 cut(s) 824
Eco88I CYCGRG 3 cut(s) 904, 1222, 1367
EcoICRI GAGCTC 2 cut(s) 643, 1372
EcoRI GAATTC 2 cut(s) 497, 510
EcoRII CCWGG 1 cut(s) 207
EcoT14I CCWWGG 3 cut(s) 657, 669, 1586
EcoT38I GRGCYC 2 cut(s) 645, 1374
ErhI CCWWGG 3 cut(s) 657, 669, 1586
Esp3I CGTCTC 1 cut(s) 528
FaqI GGGAC 2 cut(s) 651, 845
FauNDI CATATG 1 cut(s) 1442
FbaI TGATCA 2 cut(s) 561, 735
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 8 cut(s) 128, 131, 700, 787, 799, 982, 1196, 1355
FokI GGATG 3 cut(s) 533, 1361, 1414
FriOI GRGCYC 2 cut(s) 645, 1374
Fsp4HI GCNGC 8 cut(s) 128, 131, 700, 787, 799, 982, 1196, 1355
FspBI CTAG 5 cut(s) 417, 458, 828, 1121, 1175
GlaI GCGC 4 cut(s) 300, 802, 1042, 1559
GluI GCNGC 8 cut(s) 128, 131, 700, 787, 799, 982, 1196, 1355
GsaI CCCAGC 1 cut(s) 807
HaeII RGCGCY 2 cut(s) 804, 1044
HaeIII GGCC 4 cut(s) 26, 84, 212, 611
HapII CCGG 6 cut(s) 81, 93, 121, 134, 905, 1561
HgaI GACGC 1 cut(s) 1148
HhaI GCGC 4 cut(s) 301, 803, 1043, 1560
Hin6I GCGC 4 cut(s) 299, 801, 1041, 1558
HinP1I GCGC 4 cut(s) 299, 801, 1041, 1558
HincII GTYRAC 1 cut(s) 61
HindII GTYRAC 1 cut(s) 61
HinfI GANTC 6 cut(s) 74, 256, 505, 1092, 1524, 1582
HpaII CCGG 6 cut(s) 81, 93, 121, 134, 905, 1561
HphI GGTGA 7 cut(s) 163, 340, 556, 631, 703, 1148, 1150
Hpy166II GTNNAC 7 cut(s) 48, 61, 154, 348, 361, 1069, 1324
Hpy188I TCNGA 4 cut(s) 19, 629, 1169, 1192
Hpy188III TCNNGA 6 cut(s) 121, 502, 1222, 1289, 1521, 1618
Hpy8I GTNNAC 7 cut(s) 48, 61, 154, 348, 361, 1069, 1324
Hpy99I CGWCG 2 cut(s) 425, 1382
HpyAV CCTTC 3 cut(s) 590, 1195, 1584
HpyCH4III ACNGT 6 cut(s) 65, 319, 938, 998, 1052, 1342
HpyCH4IV ACGT 3 cut(s) 104, 165, 675
HpyCH4V TGCA 9 cut(s) 314, 584, 699, 798, 1324, 1357, 1411, 1533, 1599
HpyF10VI GCNNNNNNNGC 5 cut(s) 795, 954, 1180, 1351, 1555
HpyF3I CTNAG 6 cut(s) 51, 246, 260, 879, 958, 1373
HpySE526I ACGT 3 cut(s) 104, 165, 675
HspAI GCGC 4 cut(s) 299, 801, 1041, 1558
Kpn2I TCCGGA 1 cut(s) 120
KpnI GGTACC 1 cut(s) 904
Ksp22I TGATCA 2 cut(s) 561, 735
LguI GCTCTTC 1 cut(s) 650
LmnI GCTCC 7 cut(s) 271, 386, 442, 629, 1192, 1203, 1244
Lsp1109I GCAGC 5 cut(s) 117, 711, 810, 1207, 1341
LweI GCATC 2 cut(s) 286, 1403
MaeI CTAG 5 cut(s) 417, 458, 828, 1121, 1175
MaeII ACGT 3 cut(s) 104, 165, 675
MaeIII GTNAC 5 cut(s) 369, 911, 986, 1136, 1421
MboII GAAGA 6 cut(s) 292, 637, 934, 1088, 1091, 1495
MflI RGATCY 1 cut(s) 37
MhlI GDGCHC 4 cut(s) 634, 645, 1326, 1374
MlsI TGGCCA 2 cut(s) 26, 212
MluCI AATT 7 cut(s) 446, 497, 510, 694, 895, 1128, 1621
MluNI TGGCCA 2 cut(s) 26, 212
MlyI GAGTC 4 cut(s) 83, 265, 499, 1086
Mox20I TGGCCA 2 cut(s) 26, 212
MroI TCCGGA 1 cut(s) 120
MscI TGGCCA 2 cut(s) 26, 212
MseI TTAA 1 cut(s) 159
MslI CAYNNNNRTG 2 cut(s) 881, 1309
Msp20I TGGCCA 2 cut(s) 26, 212
MspCI CTTAAG 1 cut(s) 158
MspI CCGG 6 cut(s) 81, 93, 121, 134, 905, 1561
MspR9I CCNGG 4 cut(s) 209, 905, 906, 1562
MvaI CCWGG 1 cut(s) 209
MvnI CGCG 2 cut(s) 301, 1331
MwoI GCNNNNNNNGC 5 cut(s) 795, 954, 1180, 1351, 1555
NciI CCSGG 3 cut(s) 905, 906, 1562
NcoI CCATGG 1 cut(s) 1586
NdeI CATATG 1 cut(s) 1442
NheI GCTAGC 1 cut(s) 457
NlaIV GGNNCC 3 cut(s) 85, 119, 902
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 4 cut(s) 369, 911, 986, 1136
NspI RCATGY 1 cut(s) 838
NspV TTCGAA 2 cut(s) 648, 1027
PaeR7I CTCGAG 2 cut(s) 1222, 1367
PagI TCATGA 1 cut(s) 1617
PceI AGGCCT 1 cut(s) 611
PciSI GCTCTTC 1 cut(s) 650
PcsI WCGNNNNNNNCGW 3 cut(s) 645, 1020, 1374
PfeI GAWTC 2 cut(s) 1524, 1582
PkrI GCNGC 8 cut(s) 129, 132, 701, 788, 800, 983, 1197, 1356
PleI GAGTC 4 cut(s) 82, 264, 499, 1086
PpsI GAGTC 4 cut(s) 82, 264, 499, 1086
PshAI GACNNNNGTC 1 cut(s) 659
Psp124BI GAGCTC 2 cut(s) 645, 1374
Psp6I CCWGG 1 cut(s) 207
PspFI CCCAGC 1 cut(s) 803
PspGI CCWGG 1 cut(s) 207
PspN4I GGNNCC 3 cut(s) 85, 119, 902
PspPI GGNCC 5 cut(s) 83, 118, 661, 1169, 1551
PspXI VCTCGAGB 1 cut(s) 1367
PsrI GAACNNNNNNTAC 2 cut(s) 146, 178
PstI CTGCAG 1 cut(s) 1359
PsuI RGATCY 1 cut(s) 37
RsaI GTAC 3 cut(s) 164, 902, 1070
RsaNI GTAC 3 cut(s) 163, 901, 1069
RseI CAYNNNNRTG 2 cut(s) 881, 1309
Rsr2I CGGWCCG 1 cut(s) 1169
RsrII CGGWCCG 1 cut(s) 1169
SacI GAGCTC 2 cut(s) 645, 1374
SapI GCTCTTC 1 cut(s) 650
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 8 cut(s) 128, 131, 700, 787, 799, 982, 1196, 1355
Sau96I GGNCC 5 cut(s) 83, 118, 661, 1169, 1551
SchI GAGTC 4 cut(s) 83, 265, 499, 1086
ScrFI CCNGG 4 cut(s) 209, 905, 906, 1562
SduI GDGCHC 4 cut(s) 634, 645, 1326, 1374
SfaNI GCATC 2 cut(s) 286, 1403
SfcI CTRYAG 1 cut(s) 1355
Sfr274I CTCGAG 2 cut(s) 1222, 1367
SfuI TTCGAA 2 cut(s) 648, 1027
SinI GGWCC 4 cut(s) 118, 661, 1169, 1551
SlaI CTCGAG 2 cut(s) 1222, 1367
SmaI CCCGGG 1 cut(s) 906
SmiMI CAYNNNNRTG 2 cut(s) 881, 1309
SmlI CTYRAG 4 cut(s) 158, 1094, 1222, 1367
SmoI CTYRAG 4 cut(s) 158, 1094, 1222, 1367
Sse9I AATT 7 cut(s) 446, 497, 510, 694, 895, 1128, 1621
SseBI AGGCCT 1 cut(s) 611
SsiI CCGC 8 cut(s) 127, 729, 786, 946, 982, 1172, 1329, 1549
SspMI CTAG 5 cut(s) 417, 458, 828, 1121, 1175
SstI GAGCTC 2 cut(s) 645, 1374
StuI AGGCCT 1 cut(s) 611
StyD4I CCNGG 4 cut(s) 207, 903, 904, 1560
StyI CCWWGG 3 cut(s) 657, 669, 1586
TaaI ACNGT 6 cut(s) 65, 319, 938, 998, 1052, 1342
TaiI ACGT 3 cut(s) 107, 168, 678
TaqII GACCGA 1 cut(s) 1509
TasI AATT 7 cut(s) 446, 497, 510, 694, 895, 1128, 1621
TauI GCSGC 3 cut(s) 130, 789, 984
TfiI GAWTC 2 cut(s) 1524, 1582
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TseFI GTSAC 4 cut(s) 369, 911, 986, 1136
TseI GCWGC 5 cut(s) 130, 699, 798, 1195, 1354
Tsp45I GTSAC 4 cut(s) 369, 911, 986, 1136
TspDTI ATGAA 4 cut(s) 355, 439, 498, 605
TspGWI ACGGA 3 cut(s) 100, 653, 1257
TspMI CCCGGG 1 cut(s) 904
Vha464I CTTAAG 1 cut(s) 158
VneI GTGCAC 1 cut(s) 1322
VpaK11BI GGWCC 4 cut(s) 118, 661, 1169, 1551
XapI RAATTY 2 cut(s) 497, 510
XceI RCATGY 1 cut(s) 838
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XhoI CTCGAG 2 cut(s) 1222, 1367
XmaI CCCGGG 1 cut(s) 904
XmiI GTMKAC 1 cut(s) 360
XspI CTAG 5 cut(s) 417, 458, 828, 1121, 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.