pycom15g04850

F-box LRR-repeat protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
2887687 .. 2893491
5805 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3009 bp
ATGAAGATTTGGTGCTGCCTATGCTTCACCCAAGGAGACGAACCCGAAGAGGACGATAGCGAGGCGAAGGCGATCATGAACGAGGGGGATTTCGGAAATGACAGCAATTCGGAGGTCGCCGTTGGGAATGGCGACGAAATTGACGGCAATGCTCAGAGTTTGGGGCTGGTGGGGAATGAGCGCGGCCGTGACGACCATCTGAGATTGTTTGAAGGGATGGTTCAGGCAATGCGCGGCGGTGGTGCTCAGTGGGACGAGTCTCTGTGTGTTGGCGCTCTTGCGTCGTTGAGGGCCTCAATTAGGAACCCTCGGCTTTCCGAAGGCGAGAGTAGCTCGGCTGCAGACGATGGTGGTGATCACGATTCGCACCATAAGCGAGCCAAAGTTCAATCCTTTAATCATGATTTCCATTATGCAATGGCAATGTCTTCAGGTGCGGGAAATTCCAGTTCATCTGCAGACAGAGACTACAGAATAAATCAGAGCTCTTTTGTTCCATTTAAGAGTGAGACATTCTTTCAAGATACTACTACTAATAATGGTGGTGAGGAGGGCCCCTTTGATTCTGGAAGTGGTAAGGATGATGAAGGGGATAATAGTGGCACCTCAAAAACAGAAGATTTAGAAGTTCGGATGGATCTTACAGATGACCTATTACATATGGTTTTCTCTTTCTTGGACCACATTCATCTTTGCCGAGCTGCAATAGTCTGCTGGCAGTGGCGATCTGCTAGTGCTCATGAAGATTTCTGGAGGTGTCTGAATTTTGAGAATCGAAGTATATCTGTGGATCAAATTGAGAAAATATGTTGGCGGTATCCCAATGCCACAGAATTGAATATTTCTGGTACCCCTGCTATTCACTTGCTTGTCATGAAAGCTATCTCTTCATTGAGGAATCTTGAGGTTTTAATCCTAGGTAAAGGGCAACTAGGGGACATCTTTTTCCATTCCTTGGCAGACTGTCAAATGTTGAAAAGTTCGATCATCAATGATGCTACTCTCGGGAATGGTATCCAGGAGATACCTATAAACCATGATAGACTCTGTCATCTTCAATTAACAAAATGTCGTGTTATGCGCATATCCATCAGGTGTCCGCAACTCGAAACTTTGTCATTGAAGCGCAGTAACATGGCGCAGGCTGTTCTTAATAGCCCTCTTTTGCATGATGTTGATATAGGCTCTTGCCACAAGCTTTCAGATGCTGCAATTCGTTCAGCGGCAACTTCATGCCCTCAATTAGAGTCTTTAGATATGTCAAATTGTTCATGTGTTAGTGATGAAACTCTACGTGAGATTGCTCTTACTTGTGCTAATCTCCATGTTCTCAATGCGTCATACTGTCCAAATATATCCCTTGAGTCTGTAAGACTGCCAATGTTGACGGTTCTTAAGCTTCACAGTTGTGAGGGCATCACTTCGGCTTCAATGGTTGCGATATCTCATAGTTACATGCTTGAGGTTTTGGAGCTTGACAATTGCAGTCTACTTACTGCTGTCAACTTGGATCTTCCACGCTTGCAGAATATTAGACTAGTACATTGTCGCAAGTTTGCTGATTTGAATCTACGATGCATCATGCTGTCATCAATAATGGTCTCTAACTGTCCTGTGCTCCATCGTATCAACATCACTTCAAATTCACTTCAGAAACTAGCTCTGCAAAAGCAAGAGAGCTTAACCACGCTGGCACTGCAATGCCAAAGTTTGCAAGAAGTGGACCTTACAGATTGTGAATGTTTAACAAATTCTATATGTGATGTTTTCAGCGATGGTGGTGGGTGTCCTTTGCTCAAAACATTAGTTCTCGAAAACTGTGAGAGCTTAACCGCAGTTCGATTCTGCAGCACTTCTATAGTCAGCCTCTCACTTGTTGGTTGCCGGGCAATTACTTCTCTTGAACTGACTTGCCCCTATCTTGAACAAGTTTCTTTAGATGGTTGCGATCATCTTGAAAGAGCAGCATTTTGTCCAGTTGGTCTTAGGTCACTAAATTTGGGAATATGTCCCAAATTGAATGTGCTCAGTATCGAAGCGCCGAATATGGTGCTGCTTGAGCTGAAGGGATGTGGCGTGTTAGCTGAAGTATCCATCAATTGTCCATTATTAACGTCTCTAGACGCTTCCTTTTGCAGGGATGATTGCTTGTCTGCAACTGCTGCTTCATGCCCGCTGATTGAGTCTTTAATTCTAATGTCATGCCCCTCTGTTGGTTCTGATGGACTCTACTCTTTGCGCTGCCTTCCAAATTTAATTGCGCTTGATTTGTCCTACACTTTCTTGATGAACTTGAAGCCAGTTTTCGAGTCTTGTATGAAACTTAAGGTGTTAAAGTTACAAGCTTGCAAGTACTTATCTGACTCATCCTTGGAGCCTCTTTACAAGGAAGGGGCTCTTCCAGCTCTCCAAGAACTGGATTTGTCTTACGGAACCCTCTGTCAGTCTGCTATTGAGGAGCTTCTTTCTTTTTGCACGCACTTAACTCATGTGAGCTTGAATGGCTGTGTGAACATGCATGACCTGAATTGGGGTAGCAGTGGCGGGCAACCTGCTGCCCTATCTGGCATGTTTTTACCTGAGAATGTGCAGGTTCCAATTGAGCAGCCAAACCGGTTACTGCAGAACCTCAACTGTGTAGGCTGTCCAAATATTAGGAAAGTTGTCATTCCACAAGCAGCACGTTGTTTCCACATGTCGTCATTAAACCTTTCTCTTTCTGCAAATTTAAAGGACGTTGATGTCGCTTGTTTCAACCTCTGCTTCCTTAATTTGAGCAATTGTACTTCTTTGGAAGTTTTGAAGCTTGACTGTCCGAAATTGACTAGTCTCTTTCTTCAGTCCTGCAACATTGATGAAGCAGCAGTGGAAGCTGCCATATCTAAATGTAGCATGCTGGAGACTCTTGATGTTCGTTTTTGTCCCAAGATAAGCACGATGAGCATGGGGAAATTACGTGCTGCATGCCCTAATTTGAAGCGCATCTTCAGCAGCCTGCAACAGTCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1003

Amino Acids

109.41

Weight (kDa)

5.08

Isoelectric Point (pI)

49.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 213 - 252 3.1e-09 F-box domain
F-box-like PF12937 216 - 256 2.1e-08 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2741
Acc16I TGCGCA 1 cut(s) 1082
Acc36I ACCTGC 2 cut(s) 2560, 2581
Acc65I GGTACC 1 cut(s) 848
AccB1I GGYRCC 2 cut(s) 602, 848
AccB7I CCANNNNNTGG 2 cut(s) 955, 2416
AccI GTMKAC 1 cut(s) 1489
AccII CGCG 2 cut(s) 183, 234
AclWI GGATC 3 cut(s) 645, 798, 1518
AcoI YGGCCR 1 cut(s) 184
AcsI RAATTY 7 cut(s) 442, 763, 1642, 1750, 1996, 2251, 2725
AcuI CTGAAG 6 cut(s) 414, 1634, 2084, 2106, 2822, 2971
AfaI GTAC 4 cut(s) 850, 1542, 2354, 2785
AfiI CCNNNNNNNGG 6 cut(s) 300, 955, 2136, 2213, 2416, 2530
AflII CTTAAG 2 cut(s) 1394, 2324
AflIII ACRYGT 1 cut(s) 2694
AgeI ACCGGT 1 cut(s) 2613
AhlI ACTAGT 2 cut(s) 1537, 2825
AjnI CCWGG 1 cut(s) 1017
AleI CACNNNNGTG 1 cut(s) 1407
Alw21I GWGCWC 5 cut(s) 247, 488, 739, 1620, 2028
Alw26I GTCTC 8 cut(s) 30, 264, 459, 503, 1606, 2121, 2834, 2894
AlwI GGATC 3 cut(s) 645, 798, 1518
AlwNI CAGNNNCTG 1 cut(s) 1208
Ama87I CYCGRG 1 cut(s) 1004
AoxI GGCC 3 cut(s) 184, 291, 553
ApaI GGGCCC 1 cut(s) 557
ApoI RAATTY 7 cut(s) 442, 763, 1642, 1750, 1996, 2251, 2725
AsiGI ACCGGT 1 cut(s) 2613
Asp718I GGTACC 1 cut(s) 848
AspA2I CCTAGG 1 cut(s) 916
AspS9I GGNCC 5 cut(s) 291, 553, 554, 679, 1723
AsuC2I CCSGG 1 cut(s) 1886
AsuHPI GGTGA 3 cut(s) 19, 365, 557
AvaI CYCGRG 1 cut(s) 1004
AvaII GGWCC 2 cut(s) 679, 1723
AvrII CCTAGG 1 cut(s) 916
BaeGI GKGCMC 1 cut(s) 557
BanI GGYRCC 2 cut(s) 602, 848
BanII GRGCYC 3 cut(s) 488, 557, 2398
BbsI GAAGAC 1 cut(s) 420
Bbv12I GWGCWC 5 cut(s) 247, 488, 739, 1620, 2028
BceAI ACGGC 3 cut(s) 104, 160, 171
BcgI CGANNNNNNTGC 2 cut(s) 2032, 2066
BciT130I CCWGG 1 cut(s) 1019
BciVI GTATCC 3 cut(s) 828, 1025, 2101
BclI TGATCA 1 cut(s) 355
BcnI CCSGG 1 cut(s) 1886
BcoDI GTCTC 8 cut(s) 30, 264, 459, 503, 1606, 2121, 2834, 2894
BcuI ACTAGT 2 cut(s) 1537, 2825
BfaI CTAG 7 cut(s) 732, 917, 932, 1538, 1658, 2120, 2826
BfmI CTRYAG 6 cut(s) 339, 456, 469, 1846, 1857, 2621
BfoI RGCGCY 2 cut(s) 276, 2042
BfrI CTTAAG 2 cut(s) 1394, 2324
BfuAI ACCTGC 2 cut(s) 2560, 2581
BfuI GTATCC 3 cut(s) 828, 1025, 2101
BlnI CCTAGG 1 cut(s) 916
BmcAI AGTACT 1 cut(s) 2354
Bme1390I CCNGG 2 cut(s) 1019, 1886
Bme18I GGWCC 2 cut(s) 679, 1723
BmeT110I CYCGRG 1 cut(s) 1004
BmgT120I GGNCC 5 cut(s) 291, 553, 554, 679, 1723
BmiI GGNNCC 8 cut(s) 305, 555, 556, 604, 850, 2376, 2434, 2595
BmrFI CCNGG 2 cut(s) 1019, 1886
BmsI GCATC 6 cut(s) 985, 1195, 1425, 1565, 1587, 2991
BpiI GAAGAC 1 cut(s) 420
BplI GAGNNNNNCTC 2 cut(s) 317, 349
BpmI CTGGAG 2 cut(s) 772, 2918
BpuEI CTTGAG 4 cut(s) 923, 1382, 1481, 2078
BpuMI CCSGG 1 cut(s) 1886
BsaAI YACGTR 2 cut(s) 1295, 2957
BsaBI GATNNNNATC 1 cut(s) 1566
BsaI GGTCTC 1 cut(s) 1606
BsaJI CCNNGG 5 cut(s) 31, 308, 916, 954, 2370
BsaWI WCCGGW 1 cut(s) 2613
Bsc4I CCNNNNNNNGG 6 cut(s) 300, 955, 2136, 2213, 2416, 2530
Bse118I RCCGGY 1 cut(s) 2613
Bse1I ACTGG 4 cut(s) 447, 1976, 2300, 2421
Bse3DI GCAATG 5 cut(s) 154, 234, 423, 429, 1706
Bse8I GATNNNNATC 1 cut(s) 1566
BseBI CCWGG 1 cut(s) 1019
BseDI CCNNGG 5 cut(s) 31, 308, 916, 954, 2370
BseGI GGATG 6 cut(s) 222, 586, 639, 2075, 2146, 2366
BseJI GATNNNNATC 1 cut(s) 1566
BseLI CCNNNNNNNGG 6 cut(s) 300, 955, 2136, 2213, 2416, 2530
BseMI GCAATG 5 cut(s) 154, 234, 423, 429, 1706
BseMII CTCAG 5 cut(s) 167, 191, 260, 2041, 2571
BseNI ACTGG 4 cut(s) 447, 1976, 2300, 2421
BseRI GAGGAG 2 cut(s) 563, 2471
BseSI GKGCMC 1 cut(s) 557
BseX3I CGGCCG 1 cut(s) 184
BsgI GTGCAG 1 cut(s) 2609
Bsh1236I CGCG 2 cut(s) 183, 234
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 3 cut(s) 186, 293, 555
BshNI GGYRCC 2 cut(s) 602, 848
BshTI ACCGGT 1 cut(s) 2613
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 5 cut(s) 247, 488, 739, 1620, 2028
BsiHKCI CYCGRG 1 cut(s) 1004
BsiSI CCGG 2 cut(s) 1885, 2614
BslFI GGGAC 4 cut(s) 266, 950, 1995, 2907
BslI CCNNNNNNNGG 6 cut(s) 300, 955, 2136, 2213, 2416, 2530
BsmAI GTCTC 8 cut(s) 30, 264, 459, 503, 1606, 2121, 2834, 2894
BsmBI CGTCTC 2 cut(s) 30, 2121
BsmFI GGGAC 4 cut(s) 266, 950, 1995, 2907
BsnI GGCC 3 cut(s) 186, 293, 555
Bso31I GGTCTC 1 cut(s) 1606
BsoBI CYCGRG 1 cut(s) 1004
Bsp120I GGGCCC 1 cut(s) 553
Bsp1286I GDGCHC 7 cut(s) 247, 488, 557, 739, 1620, 2028, 2398
Bsp143I GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
BspANI GGCC 3 cut(s) 186, 293, 555
BspCNI CTCAG 5 cut(s) 166, 192, 259, 2040, 2572
BspFNI CGCG 2 cut(s) 183, 234
BspHI TCATGA 4 cut(s) 75, 400, 739, 873
BspLI GGNNCC 8 cut(s) 305, 555, 556, 604, 850, 2376, 2434, 2595
BspMAI CTGCAG 4 cut(s) 343, 460, 1850, 2625
BspMI ACCTGC 2 cut(s) 2560, 2581
BspPI GGATC 3 cut(s) 645, 798, 1518
BspQI GCTCTTC 1 cut(s) 2403
BspT107I GGYRCC 2 cut(s) 602, 848
BspTI CTTAAG 2 cut(s) 1394, 2324
BspTNI GGTCTC 1 cut(s) 1606
BsrDI GCAATG 5 cut(s) 154, 234, 423, 429, 1706
BsrFI RCCGGY 1 cut(s) 2613
BsrI ACTGG 4 cut(s) 447, 1976, 2300, 2421
BssAI RCCGGY 1 cut(s) 2613
BssECI CCNNGG 5 cut(s) 31, 308, 916, 954, 2370
BssMI GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
BssT1I CCWWGG 4 cut(s) 31, 916, 954, 2370
Bst2UI CCWGG 1 cut(s) 1019
Bst4CI ACNGT 9 cut(s) 965, 1346, 1390, 1406, 1610, 1820, 2636, 2813, 3003
Bst6I CTCTTC 3 cut(s) 42, 892, 2403
BstAFI CTTAAG 2 cut(s) 1394, 2324
BstAPI GCANNNNNTGC 1 cut(s) 2162
BstBAI YACGTR 2 cut(s) 1295, 2957
BstDEI CTNAG 6 cut(s) 153, 200, 246, 1985, 2027, 2580
BstENI CCTNNNNNAGG 2 cut(s) 298, 2134
BstF5I GGATG 6 cut(s) 222, 586, 639, 2075, 2146, 2366
BstFNI CGCG 2 cut(s) 183, 234
BstH2I RGCGCY 2 cut(s) 276, 2042
BstKTI GATC 8 cut(s) 75, 358, 640, 728, 793, 987, 1513, 1951
BstMAI GTCTC 8 cut(s) 30, 264, 459, 503, 1606, 2121, 2834, 2894
BstMBI GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
BstMCI CGRYCG 1 cut(s) 187
BstNI CCWGG 1 cut(s) 1019
BstNSI RCATGY 6 cut(s) 1459, 2518, 2572, 2698, 2896, 2967
BstSCI CCNGG 2 cut(s) 1017, 1884
BstSFI CTRYAG 6 cut(s) 339, 456, 469, 1846, 1857, 2621
BstSLI GKGCMC 1 cut(s) 557
BstUI CGCG 2 cut(s) 183, 234
BstV2I GAAGAC 1 cut(s) 420
BstX2I RGATCY 2 cut(s) 637, 1510
BstYI RGATCY 2 cut(s) 637, 1510
BstZI CGGCCG 1 cut(s) 184
BsuI GTATCC 3 cut(s) 828, 1025, 2101
BsuRI GGCC 3 cut(s) 186, 293, 555
BtgZI GCGATG 1 cut(s) 1788
BtsCI GGATG 6 cut(s) 222, 586, 639, 2075, 2146, 2366
BtsI GCAGTG 4 cut(s) 725, 1694, 2545, 2871
BtsIMutI CAGTG 5 cut(s) 254, 725, 1694, 2545, 2871
BveI ACCTGC 2 cut(s) 2560, 2581
CaiI CAGNNNCTG 1 cut(s) 1208
CciI TCATGA 4 cut(s) 75, 400, 739, 873
Cfr10I RCCGGY 1 cut(s) 2613
Cfr13I GGNCC 5 cut(s) 291, 553, 554, 679, 1723
CseI GACGC 3 cut(s) 270, 1326, 2132
Csp6I GTAC 4 cut(s) 849, 1541, 2353, 2784
CspAI ACCGGT 1 cut(s) 2613
CviQI GTAC 4 cut(s) 849, 1541, 2353, 2784
DdeI CTNAG 6 cut(s) 153, 200, 246, 1985, 2027, 2580
DpnI GATC 8 cut(s) 74, 357, 639, 727, 792, 986, 1512, 1950
DpnII GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
DraI TTTAAA 1 cut(s) 2730
DrdI GACNNNNNNGTC 1 cut(s) 2741
DseDI GACNNNNNNGTC 1 cut(s) 2741
EaeI YGGCCR 1 cut(s) 184
EagI CGGCCG 1 cut(s) 184
Eam1104I CTCTTC 3 cut(s) 42, 892, 2403
EarI CTCTTC 3 cut(s) 42, 892, 2403
Ecl136II GAGCTC 1 cut(s) 486
EclXI CGGCCG 1 cut(s) 184
Eco130I CCWWGG 4 cut(s) 31, 916, 954, 2370
Eco24I GRGCYC 3 cut(s) 488, 557, 2398
Eco31I GGTCTC 1 cut(s) 1606
Eco32I GATATC 1 cut(s) 1443
Eco47I GGWCC 2 cut(s) 679, 1723
Eco52I CGGCCG 1 cut(s) 184
Eco53kI GAGCTC 1 cut(s) 486
Eco57I CTGAAG 6 cut(s) 414, 1634, 2084, 2106, 2822, 2971
Eco88I CYCGRG 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 486
EcoNI CCTNNNNNAGG 2 cut(s) 298, 2134
EcoO109I RGGNCCY 3 cut(s) 291, 553, 554
EcoRII CCWGG 1 cut(s) 1017
EcoRV GATATC 1 cut(s) 1443
EcoT14I CCWWGG 4 cut(s) 31, 916, 954, 2370
EcoT22I ATGCAT 2 cut(s) 1580, 2520
EcoT38I GRGCYC 3 cut(s) 488, 557, 2398
ErhI CCWWGG 4 cut(s) 31, 916, 954, 2370
Esp3I CGTCTC 2 cut(s) 30, 2121
FalI AAGNNNNNCTT 6 cut(s) 1710, 1742, 2382, 2414, 2969, 3001
FaqI GGGAC 4 cut(s) 266, 950, 1995, 2907
FauI CCCGC 3 cut(s) 430, 2181, 2537
FauNDI CATATG 1 cut(s) 660
FbaI TGATCA 1 cut(s) 355
FblI GTMKAC 1 cut(s) 1489
FokI GGATG 6 cut(s) 229, 593, 646, 2082, 2153, 2353
FriOI GRGCYC 3 cut(s) 488, 557, 2398
FspAI RTGCGCAY 1 cut(s) 1082
FspBI CTAG 7 cut(s) 732, 917, 932, 1538, 1658, 2120, 2826
FspI TGCGCA 1 cut(s) 1082
GsuI CTGGAG 2 cut(s) 772, 2918
HaeII RGCGCY 2 cut(s) 276, 2042
HaeIII GGCC 3 cut(s) 186, 293, 555
HapII CCGG 2 cut(s) 1885, 2614
HgaI GACGC 3 cut(s) 270, 1326, 2132
HincII GTYRAC 2 cut(s) 1386, 1504
HindII GTYRAC 2 cut(s) 1386, 1504
HindIII AAGCTT 4 cut(s) 1196, 1397, 2343, 2804
HpaII CCGG 2 cut(s) 1885, 2614
HphI GGTGA 3 cut(s) 19, 365, 557
Hpy166II GTNNAC 5 cut(s) 1386, 1490, 1504, 1723, 2512
Hpy8I GTNNAC 5 cut(s) 1386, 1490, 1504, 1723, 2512
Hpy99I CGWCG 2 cut(s) 137, 286
HpyAV CCTTC 7 cut(s) 61, 206, 314, 581, 2059, 2255, 2384
HpyCH4III ACNGT 9 cut(s) 965, 1346, 1390, 1406, 1610, 1820, 2636, 2813, 3003
HpyCH4IV ACGT 5 cut(s) 1294, 2114, 2683, 2736, 2956
HpyF3I CTNAG 6 cut(s) 153, 200, 246, 1985, 2027, 2580
HpySE526I ACGT 5 cut(s) 1294, 2114, 2683, 2736, 2956
KpnI GGTACC 1 cut(s) 852
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
LguI GCTCTTC 1 cut(s) 2403
LmnI GCTCC 4 cut(s) 1471, 1623, 2374, 2458
LweI GCATC 6 cut(s) 985, 1195, 1425, 1565, 1587, 2991
MaeI CTAG 7 cut(s) 732, 917, 932, 1538, 1658, 2120, 2826
MaeII ACGT 5 cut(s) 1294, 2114, 2683, 2736, 2956
MaeIII GTNAC 6 cut(s) 188, 1130, 1451, 1989, 2337, 2616
MalI GATC 8 cut(s) 74, 357, 639, 727, 792, 986, 1512, 1950
MboI GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
MfeI CAATTG 4 cut(s) 1480, 2098, 2598, 2779
MflI RGATCY 2 cut(s) 637, 1510
MhlI GDGCHC 7 cut(s) 247, 488, 557, 739, 1620, 2028, 2398
MlyI GAGTC 9 cut(s) 266, 1038, 1256, 1373, 2192, 2220, 2318, 2357, 2896
Mph1103I ATGCAT 2 cut(s) 1580, 2520
MslI CAYNNNNRTG 2 cut(s) 1407, 1699
MspA1I CMGCKG 2 cut(s) 1223, 2176
MspCI CTTAAG 2 cut(s) 1394, 2324
MspI CCGG 2 cut(s) 1885, 2614
MspR9I CCNGG 2 cut(s) 1019, 1886
MunI CAATTG 4 cut(s) 1480, 2098, 2598, 2779
MvaI CCWGG 1 cut(s) 1019
MvnI CGCG 2 cut(s) 183, 234
NciI CCSGG 1 cut(s) 1886
NdeI CATATG 1 cut(s) 660
NdeII GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
NlaIV GGNNCC 8 cut(s) 305, 555, 556, 604, 850, 2376, 2434, 2595
NmeAIII GCCGAG 3 cut(s) 289, 314, 722
NmuCI GTSAC 2 cut(s) 188, 1989
NsbI TGCGCA 1 cut(s) 1082
NsiI ATGCAT 2 cut(s) 1580, 2520
NspI RCATGY 6 cut(s) 1459, 2518, 2572, 2698, 2896, 2967
OliI CACNNNNGTG 1 cut(s) 1407
PaeI GCATGC 2 cut(s) 2896, 2967
PagI TCATGA 4 cut(s) 75, 400, 739, 873
PciI ACATGT 1 cut(s) 2694
PciSI GCTCTTC 1 cut(s) 2403
PfeI GAWTC 6 cut(s) 362, 563, 772, 898, 1567, 1842
PflFI GACNNNGTC 1 cut(s) 1047
PflMI CCANNNNNTGG 2 cut(s) 955, 2416
PfoI TCCNGGA 1 cut(s) 1017
PinAI ACCGGT 1 cut(s) 2613
PleI GAGTC 9 cut(s) 265, 1038, 1255, 1372, 2191, 2220, 2317, 2357, 2896
PpsI GAGTC 9 cut(s) 265, 1038, 1255, 1372, 2191, 2220, 2317, 2357, 2896
Ppu21I YACGTR 2 cut(s) 1295, 2957
PscI ACATGT 1 cut(s) 2694
Psp124BI GAGCTC 1 cut(s) 488
Psp6I CCWGG 1 cut(s) 1017
PspGI CCWGG 1 cut(s) 1017
PspN4I GGNNCC 8 cut(s) 305, 555, 556, 604, 850, 2376, 2434, 2595
PspOMI GGGCCC 1 cut(s) 553
PspPI GGNCC 5 cut(s) 291, 553, 554, 679, 1723
PstI CTGCAG 4 cut(s) 343, 460, 1850, 2625
PstNI CAGNNNCTG 1 cut(s) 1208
PsuI RGATCY 2 cut(s) 637, 1510
PsyI GACNNNGTC 1 cut(s) 1047
RsaI GTAC 4 cut(s) 850, 1542, 2354, 2785
RsaNI GTAC 4 cut(s) 849, 1541, 2353, 2784
RseI CAYNNNNRTG 2 cut(s) 1407, 1699
SacI GAGCTC 1 cut(s) 488
SapI GCTCTTC 1 cut(s) 2403
Sau3AI GATC 8 cut(s) 72, 355, 637, 725, 790, 984, 1510, 1948
Sau96I GGNCC 5 cut(s) 291, 553, 554, 679, 1723
ScaI AGTACT 1 cut(s) 2354
SchI GAGTC 9 cut(s) 266, 1038, 1256, 1373, 2192, 2220, 2318, 2357, 2896
ScrFI CCNGG 2 cut(s) 1019, 1886
SduI GDGCHC 7 cut(s) 247, 488, 557, 739, 1620, 2028, 2398
SfaNI GCATC 6 cut(s) 985, 1195, 1425, 1565, 1587, 2991
SfcI CTRYAG 6 cut(s) 339, 456, 469, 1846, 1857, 2621
SinI GGWCC 2 cut(s) 679, 1723
SmiMI CAYNNNNRTG 2 cut(s) 1407, 1699
SmlI CTYRAG 6 cut(s) 902, 1361, 1394, 1460, 2057, 2324
SmoI CTYRAG 6 cut(s) 902, 1361, 1394, 1460, 2057, 2324
SpeI ACTAGT 2 cut(s) 1537, 2825
SphI GCATGC 2 cut(s) 2896, 2967
SspI AATATT 3 cut(s) 841, 1531, 2653
SspMI CTAG 7 cut(s) 732, 917, 932, 1538, 1658, 2120, 2826
SstI GAGCTC 1 cut(s) 488
StyD4I CCNGG 2 cut(s) 1017, 1884
StyI CCWWGG 4 cut(s) 31, 916, 954, 2370
TaaI ACNGT 9 cut(s) 965, 1346, 1390, 1406, 1610, 1820, 2636, 2813, 3003
TaiI ACGT 5 cut(s) 1297, 2117, 2686, 2739, 2959
TaqI TCGA 7 cut(s) 775, 983, 1107, 1812, 1840, 2034, 2307
TatI WGTACW 3 cut(s) 1540, 2352, 2783
TauI GCSGC 3 cut(s) 186, 237, 1226
TfiI GAWTC 6 cut(s) 362, 563, 772, 898, 1567, 1842
TscAI CASTG 5 cut(s) 254, 725, 1701, 2545, 2871
TseFI GTSAC 2 cut(s) 188, 1989
Tsp45I GTSAC 2 cut(s) 188, 1989
TspGWI ACGGA 1 cut(s) 2445
TspRI CASTG 5 cut(s) 254, 725, 1701, 2545, 2871
Tth111I GACNNNGTC 1 cut(s) 1047
Van91I CCANNNNNTGG 2 cut(s) 955, 2416
Vha464I CTTAAG 2 cut(s) 1394, 2324
VpaK11BI GGWCC 2 cut(s) 679, 1723
XagI CCTNNNNNAGG 2 cut(s) 298, 2134
XapI RAATTY 7 cut(s) 442, 763, 1642, 1750, 1996, 2251, 2725
XbaI TCTAGA 1 cut(s) 2119
XceI RCATGY 6 cut(s) 1459, 2518, 2572, 2698, 2896, 2967
XmaJI CCTAGG 1 cut(s) 916
XmiI GTMKAC 1 cut(s) 1489
XspI CTAG 7 cut(s) 732, 917, 932, 1538, 1658, 2120, 2826
ZrmI AGTACT 1 cut(s) 2354
Zsp2I ATGCAT 2 cut(s) 1580, 2520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.