Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20540 AT2G20540 |
| fragaria_vesca | FvH4_2g36320 |
| malus_domestica | MD15G1099800.v1.1 |
| prunus_persica | Prupe.1G454600_v2.0.a1 |
| pyrus_communis | pycom15g09180 |
| rosa_chinensis | RchiOBHm_Chr6g0305561 |
| rosa_laevigata | RLG00000010877 |
| rosa_multiflora | Rmu_co8430547.1_g000001 Rmu_sc0000841.1_g000002 Rmu_sc0001153.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00162590 |
| rosa_rugosa | Rorug06G0341700 |
| rosa_samantha | Rh6AG453700 Rh6BG447900 Rh6DG454000 |
| rosa_wichuraiana | Rw6G039540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1379 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 751 |
| Acc16I | TGCGCA | 1 cut(s) | 886 |
| Acc36I | ACCTGC | 1 cut(s) | 1292 |
| AccBSI | CCGCTC | 1 cut(s) | 73 |
| AccI | GTMKAC | 1 cut(s) | 779 |
| AccII | CGCG | 2 cut(s) | 491, 1104 |
| AciI | CCGC | 3 cut(s) | 71, 491, 1263 |
| AcoI | YGGCCR | 1 cut(s) | 1452 |
| AcsI | RAATTY | 7 cut(s) | 30, 157, 210, 458, 542, 732, 1445 |
| AdeI | CACNNNGTG | 1 cut(s) | 628 |
| AfaI | GTAC | 4 cut(s) | 168, 929, 989, 1066 |
| AflIII | ACRYGT | 3 cut(s) | 276, 342, 924 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 640 |
| AjiI | CACGTC | 1 cut(s) | 277 |
| AjnI | CCWGG | 3 cut(s) | 170, 1192, 1405 |
| AluBI | AGCT | 8 cut(s) | 232, 371, 806, 892, 899, 943, 1100, 1504 |
| AluI | AGCT | 8 cut(s) | 232, 371, 806, 892, 899, 943, 1100, 1504 |
| Alw21I | GWGCWC | 3 cut(s) | 901, 1162, 1275 |
| Alw26I | GTCTC | 2 cut(s) | 677, 1476 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 16, 1039 |
| Ama87I | CYCGRG | 1 cut(s) | 1247 |
| AoxI | GGCC | 2 cut(s) | 548, 1452 |
| ApeKI | GCWGC | 4 cut(s) | 25, 943, 1002, 1504 |
| ApoI | RAATTY | 7 cut(s) | 30, 157, 210, 458, 542, 732, 1445 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1119 |
| AspA2I | CCTAGG | 1 cut(s) | 1339 |
| AspLEI | GCGC | 4 cut(s) | 134, 303, 491, 887 |
| AspS9I | GGNCC | 1 cut(s) | 548 |
| AsuHPI | GGTGA | 2 cut(s) | 271, 1469 |
| AsuII | TTCGAA | 2 cut(s) | 37, 321 |
| AvaI | CYCGRG | 1 cut(s) | 1247 |
| AvrII | CCTAGG | 1 cut(s) | 1339 |
| BanII | GRGCYC | 1 cut(s) | 901 |
| Bbv12I | GWGCWC | 3 cut(s) | 901, 1162, 1275 |
| BbvI | GCAGC | 4 cut(s) | 37, 930, 989, 1491 |
| BccI | CCATC | 1 cut(s) | 577 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 17, 51, 1402, 1436 |
| BciT130I | CCWGG | 3 cut(s) | 172, 1194, 1407 |
| BclI | TGATCA | 3 cut(s) | 18, 477, 1030 |
| BcoDI | GTCTC | 2 cut(s) | 677, 1476 |
| BfaI | CTAG | 2 cut(s) | 1340, 1499 |
| BfmI | CTRYAG | 3 cut(s) | 8, 1228, 1561 |
| BfoI | RGCGCY | 1 cut(s) | 135 |
| BfuAI | ACCTGC | 1 cut(s) | 1292 |
| BisI | GCNGC | 6 cut(s) | 26, 71, 492, 944, 1003, 1505 |
| BlnI | CCTAGG | 1 cut(s) | 1339 |
| BlsI | GCNGC | 6 cut(s) | 27, 72, 493, 945, 1004, 1506 |
| Bme1390I | CCNGG | 3 cut(s) | 172, 1194, 1407 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 640 |
| BmeT110I | CYCGRG | 1 cut(s) | 1247 |
| BmgBI | CACGTC | 1 cut(s) | 277 |
| BmgT120I | GGNCC | 1 cut(s) | 548 |
| BmrFI | CCNGG | 3 cut(s) | 172, 1194, 1407 |
| BmsI | GCATC | 4 cut(s) | 607, 1026, 1119, 1170 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1563 |
| BpmI | CTGGAG | 1 cut(s) | 1061 |
| Bpu14I | TTCGAA | 2 cut(s) | 37, 321 |
| BpuEI | CTTGAG | 1 cut(s) | 923 |
| BsaAI | YACGTR | 1 cut(s) | 991 |
| BsaJI | CCNNGG | 3 cut(s) | 170, 1339, 1405 |
| BsaWI | WCCGGW | 1 cut(s) | 649 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1343, 1373 |
| Bse118I | RCCGGY | 2 cut(s) | 877, 1454 |
| Bse1I | ACTGG | 1 cut(s) | 156 |
| Bse3DI | GCAATG | 4 cut(s) | 771, 976, 1237, 1272 |
| BseBI | CCWGG | 3 cut(s) | 172, 1194, 1407 |
| BseDI | CCNNGG | 3 cut(s) | 170, 1339, 1405 |
| BseGI | GGATG | 5 cut(s) | 79, 658, 1054, 1360, 1371 |
| BseMI | GCAATG | 4 cut(s) | 771, 976, 1237, 1272 |
| BseMII | CTCAG | 2 cut(s) | 233, 416 |
| BseNI | ACTGG | 1 cut(s) | 156 |
| BseXI | GCAGC | 4 cut(s) | 37, 930, 989, 1491 |
| Bsh1236I | CGCG | 2 cut(s) | 491, 1104 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1422 |
| BshFI | GGCC | 2 cut(s) | 550, 1454 |
| BsiEI | CGRYCG | 1 cut(s) | 1422 |
| BsiHKAI | GWGCWC | 3 cut(s) | 901, 1162, 1275 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1247 |
| BsiSI | CCGG | 4 cut(s) | 650, 820, 878, 1455 |
| BslFI | GGGAC | 1 cut(s) | 94 |
| BsmAI | GTCTC | 2 cut(s) | 677, 1476 |
| BsmFI | GGGAC | 1 cut(s) | 94 |
| BsmI | GAATGC | 2 cut(s) | 580, 831 |
| BsnI | GGCC | 2 cut(s) | 550, 1454 |
| BsoBI | CYCGRG | 1 cut(s) | 1247 |
| Bsp119I | TTCGAA | 2 cut(s) | 37, 321 |
| Bsp1286I | GDGCHC | 3 cut(s) | 901, 1162, 1275 |
| Bsp143I | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| Bsp68I | TCGCGA | 1 cut(s) | 1104 |
| BspACI | CCGC | 3 cut(s) | 71, 491, 1263 |
| BspANI | GGCC | 2 cut(s) | 550, 1454 |
| BspCNI | CTCAG | 2 cut(s) | 232, 417 |
| BspFNI | CGCG | 2 cut(s) | 491, 1104 |
| BspMAI | CTGCAG | 3 cut(s) | 12, 1232, 1565 |
| BspMI | ACCTGC | 1 cut(s) | 1292 |
| BspT104I | TTCGAA | 2 cut(s) | 37, 321 |
| BsrBI | CCGCTC | 1 cut(s) | 73 |
| BsrDI | GCAATG | 4 cut(s) | 771, 976, 1237, 1272 |
| BsrFI | RCCGGY | 2 cut(s) | 877, 1454 |
| BsrI | ACTGG | 1 cut(s) | 156 |
| BssAI | RCCGGY | 2 cut(s) | 877, 1454 |
| BssECI | CCNNGG | 3 cut(s) | 170, 1339, 1405 |
| BssMI | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| BssNAI | GTATAC | 1 cut(s) | 780 |
| BssT1I | CCWWGG | 1 cut(s) | 1339 |
| Bst1107I | GTATAC | 1 cut(s) | 780 |
| Bst2UI | CCWGG | 3 cut(s) | 172, 1194, 1407 |
| Bst4CI | ACNGT | 3 cut(s) | 43, 290, 1119 |
| Bst6I | CTCTTC | 1 cut(s) | 1391 |
| BstBAI | YACGTR | 1 cut(s) | 991 |
| BstBI | TTCGAA | 2 cut(s) | 37, 321 |
| BstC8I | GCNNGC | 6 cut(s) | 8, 879, 883, 1014, 1083, 1102 |
| BstDEI | CTNAG | 2 cut(s) | 219, 425 |
| BstF5I | GGATG | 5 cut(s) | 79, 658, 1054, 1360, 1371 |
| BstFNI | CGCG | 2 cut(s) | 491, 1104 |
| BstH2I | RGCGCY | 1 cut(s) | 135 |
| BstHHI | GCGC | 4 cut(s) | 134, 303, 491, 887 |
| BstKTI | GATC | 5 cut(s) | 21, 366, 480, 1033, 1422 |
| BstMAI | GTCTC | 2 cut(s) | 677, 1476 |
| BstMBI | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| BstMCI | CGRYCG | 1 cut(s) | 1422 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 556, 949, 1018, 1082, 1106, 1262, 1504 |
| BstNI | CCWGG | 3 cut(s) | 172, 1194, 1407 |
| BstNSI | RCATGY | 1 cut(s) | 928 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1563 |
| BstSCI | CCNGG | 3 cut(s) | 170, 1192, 1405 |
| BstSFI | CTRYAG | 3 cut(s) | 8, 1228, 1561 |
| BstUI | CGCG | 2 cut(s) | 491, 1104 |
| BstV1I | GCAGC | 4 cut(s) | 37, 930, 989, 1491 |
| BstZ17I | GTATAC | 1 cut(s) | 780 |
| BsuRI | GGCC | 2 cut(s) | 550, 1454 |
| BtrI | CACGTC | 1 cut(s) | 277 |
| BtsCI | GGATG | 5 cut(s) | 79, 658, 1054, 1360, 1371 |
| BtsI | GCAGTG | 1 cut(s) | 726 |
| BtsIMutI | CAGTG | 2 cut(s) | 295, 726 |
| BtuMI | TCGCGA | 1 cut(s) | 1104 |
| BveI | ACCTGC | 1 cut(s) | 1292 |
| Cac8I | GCNNGC | 6 cut(s) | 8, 879, 883, 1014, 1083, 1102 |
| CaiI | CAGNNNCTG | 2 cut(s) | 16, 1039 |
| CfoI | GCGC | 4 cut(s) | 134, 303, 491, 887 |
| Cfr10I | RCCGGY | 2 cut(s) | 877, 1454 |
| Cfr13I | GGNCC | 1 cut(s) | 548 |
| CseI | GACGC | 1 cut(s) | 1553 |
| Csp6I | GTAC | 4 cut(s) | 167, 928, 988, 1065 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 252, 287 |
| CviAII | CATG | 5 cut(s) | 527, 925, 1069, 1393, 1495 |
| CviQI | GTAC | 4 cut(s) | 167, 928, 988, 1065 |
| DdeI | CTNAG | 2 cut(s) | 219, 425 |
| DpnI | GATC | 5 cut(s) | 20, 365, 479, 1032, 1421 |
| DpnII | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| DraIII | CACNNNGTG | 1 cut(s) | 628 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 751 |
| DriI | GACNNNNNGTC | 1 cut(s) | 640 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 751 |
| EaeI | YGGCCR | 1 cut(s) | 1452 |
| Eam1104I | CTCTTC | 1 cut(s) | 1391 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 640 |
| EarI | CTCTTC | 1 cut(s) | 1391 |
| Ecl136II | GAGCTC | 1 cut(s) | 899 |
| Eco130I | CCWWGG | 1 cut(s) | 1339 |
| Eco24I | GRGCYC | 1 cut(s) | 901 |
| Eco53kI | GAGCTC | 1 cut(s) | 899 |
| Eco88I | CYCGRG | 1 cut(s) | 1247 |
| EcoICRI | GAGCTC | 1 cut(s) | 899 |
| EcoRII | CCWGG | 3 cut(s) | 170, 1192, 1405 |
| EcoT14I | CCWWGG | 1 cut(s) | 1339 |
| EcoT38I | GRGCYC | 1 cut(s) | 901 |
| ErhI | CCWWGG | 1 cut(s) | 1339 |
| FaeI | CATG | 5 cut(s) | 530, 928, 1072, 1396, 1498 |
| FaqI | GGGAC | 1 cut(s) | 94 |
| FatI | CATG | 5 cut(s) | 526, 924, 1068, 1392, 1494 |
| FbaI | TGATCA | 3 cut(s) | 18, 477, 1030 |
| FblI | GTMKAC | 1 cut(s) | 779 |
| Fnu4HI | GCNGC | 6 cut(s) | 26, 71, 492, 944, 1003, 1505 |
| FokI | GGATG | 5 cut(s) | 66, 665, 1061, 1367, 1378 |
| FriOI | GRGCYC | 1 cut(s) | 901 |
| Fsp4HI | GCNGC | 6 cut(s) | 26, 71, 492, 944, 1003, 1505 |
| FspBI | CTAG | 2 cut(s) | 1340, 1499 |
| FspI | TGCGCA | 1 cut(s) | 886 |
| GlaI | GCGC | 4 cut(s) | 133, 302, 490, 886 |
| GluI | GCNGC | 6 cut(s) | 26, 71, 492, 944, 1003, 1505 |
| GsuI | CTGGAG | 1 cut(s) | 1061 |
| HaeII | RGCGCY | 1 cut(s) | 135 |
| HaeIII | GGCC | 2 cut(s) | 550, 1454 |
| HapII | CCGG | 4 cut(s) | 650, 820, 878, 1455 |
| HgaI | GACGC | 1 cut(s) | 1553 |
| HhaI | GCGC | 4 cut(s) | 134, 303, 491, 887 |
| Hin1II | CATG | 5 cut(s) | 530, 928, 1072, 1396, 1498 |
| Hin6I | GCGC | 4 cut(s) | 132, 301, 489, 885 |
| HinP1I | GCGC | 4 cut(s) | 132, 301, 489, 885 |
| HincII | GTYRAC | 1 cut(s) | 1429 |
| HindII | GTYRAC | 1 cut(s) | 1429 |
| HinfI | GANTC | 7 cut(s) | 126, 335, 786, 919, 1189, 1234, 1463 |
| HpaII | CCGG | 4 cut(s) | 650, 820, 878, 1455 |
| HphI | GGTGA | 2 cut(s) | 271, 1469 |
| Hpy166II | GTNNAC | 3 cut(s) | 274, 780, 1429 |
| Hpy188I | TCNGA | 9 cut(s) | 48, 88, 146, 222, 368, 646, 934, 1035, 1516 |
| Hpy188III | TCNNGA | 8 cut(s) | 452, 809, 902, 1103, 1124, 1163, 1247, 1249 |
| Hpy8I | GTNNAC | 3 cut(s) | 274, 780, 1429 |
| Hpy99I | CGWCG | 1 cut(s) | 1547 |
| HpyAV | CCTTC | 4 cut(s) | 43, 93, 172, 1135 |
| HpyCH4III | ACNGT | 3 cut(s) | 43, 290, 1119 |
| HpyCH4IV | ACGT | 4 cut(s) | 276, 342, 464, 990 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 556, 949, 1018, 1082, 1106, 1262, 1504 |
| HpyF3I | CTNAG | 2 cut(s) | 219, 425 |
| HpySE526I | ACGT | 4 cut(s) | 276, 342, 464, 990 |
| Hsp92II | CATG | 5 cut(s) | 530, 928, 1072, 1396, 1498 |
| HspAI | GCGC | 4 cut(s) | 132, 301, 489, 885 |
| KroI | GCCGGC | 1 cut(s) | 877 |
| KroNI | GCCGGC | 1 cut(s) | 879 |
| Ksp22I | TGATCA | 3 cut(s) | 18, 477, 1030 |
| Kzo9I | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| LmnI | GCTCC | 3 cut(s) | 896, 1270, 1516 |
| Lsp1109I | GCAGC | 4 cut(s) | 37, 930, 989, 1491 |
| LweI | GCATC | 4 cut(s) | 607, 1026, 1119, 1170 |
| MaeI | CTAG | 2 cut(s) | 1340, 1499 |
| MaeII | ACGT | 4 cut(s) | 276, 342, 464, 990 |
| MaeIII | GTNAC | 6 cut(s) | 174, 240, 259, 281, 1304, 1457 |
| MalI | GATC | 5 cut(s) | 20, 365, 479, 1032, 1421 |
| MbiI | CCGCTC | 1 cut(s) | 73 |
| MboI | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| MboII | GAAGA | 4 cut(s) | 26, 217, 712, 1408 |
| MhlI | GDGCHC | 3 cut(s) | 901, 1162, 1275 |
| MlyI | GAGTC | 1 cut(s) | 1228 |
| MroNI | GCCGGC | 1 cut(s) | 877 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1119 |
| MseI | TTAA | 2 cut(s) | 1220, 1579 |
| MspI | CCGG | 4 cut(s) | 650, 820, 878, 1455 |
| MspR9I | CCNGG | 3 cut(s) | 172, 1194, 1407 |
| Mva1269I | GAATGC | 2 cut(s) | 580, 831 |
| MvaI | CCWGG | 3 cut(s) | 172, 1194, 1407 |
| MvnI | CGCG | 2 cut(s) | 491, 1104 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 556, 949, 1018, 1082, 1106, 1262, 1504 |
| NaeI | GCCGGC | 1 cut(s) | 879 |
| NdeII | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| NgoMIV | GCCGGC | 1 cut(s) | 877 |
| NlaIII | CATG | 5 cut(s) | 530, 928, 1072, 1396, 1498 |
| NmuCI | GTSAC | 4 cut(s) | 240, 259, 281, 1457 |
| NruI | TCGCGA | 1 cut(s) | 1104 |
| NsbI | TGCGCA | 1 cut(s) | 886 |
| NspI | RCATGY | 1 cut(s) | 928 |
| NspV | TTCGAA | 2 cut(s) | 37, 321 |
| PaeR7I | CTCGAG | 1 cut(s) | 1247 |
| PciI | ACATGT | 1 cut(s) | 924 |
| PctI | GAATGC | 2 cut(s) | 580, 831 |
| PdiI | GCCGGC | 1 cut(s) | 879 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1119 |
| PfeI | GAWTC | 6 cut(s) | 126, 335, 786, 919, 1189, 1463 |
| PkrI | GCNGC | 6 cut(s) | 27, 72, 493, 945, 1004, 1506 |
| Ple19I | CGATCG | 1 cut(s) | 1422 |
| PleI | GAGTC | 1 cut(s) | 1228 |
| PpsI | GAGTC | 1 cut(s) | 1228 |
| Ppu21I | YACGTR | 1 cut(s) | 991 |
| PscI | ACATGT | 1 cut(s) | 924 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1563 |
| PsiI | TTATAA | 1 cut(s) | 1379 |
| Psp124BI | GAGCTC | 1 cut(s) | 901 |
| Psp6I | CCWGG | 3 cut(s) | 170, 1192, 1405 |
| PspGI | CCWGG | 3 cut(s) | 170, 1192, 1405 |
| PspPI | GGNCC | 1 cut(s) | 548 |
| PstI | CTGCAG | 3 cut(s) | 12, 1232, 1565 |
| PstNI | CAGNNNCTG | 2 cut(s) | 16, 1039 |
| PvuI | CGATCG | 1 cut(s) | 1422 |
| RruI | TCGCGA | 1 cut(s) | 1104 |
| RsaI | GTAC | 4 cut(s) | 168, 929, 989, 1066 |
| RsaNI | GTAC | 4 cut(s) | 167, 928, 988, 1065 |
| SacI | GAGCTC | 1 cut(s) | 901 |
| SaqAI | TTAA | 2 cut(s) | 1220, 1579 |
| SatI | GCNGC | 6 cut(s) | 26, 71, 492, 944, 1003, 1505 |
| Sau3AI | GATC | 5 cut(s) | 18, 363, 477, 1030, 1419 |
| Sau96I | GGNCC | 1 cut(s) | 548 |
| SbfI | CCTGCAGG | 1 cut(s) | 1232 |
| SchI | GAGTC | 1 cut(s) | 1228 |
| ScrFI | CCNGG | 3 cut(s) | 172, 1194, 1407 |
| SdaI | CCTGCAGG | 1 cut(s) | 1232 |
| SduI | GDGCHC | 3 cut(s) | 901, 1162, 1275 |
| SfaNI | GCATC | 4 cut(s) | 607, 1026, 1119, 1170 |
| SfcI | CTRYAG | 3 cut(s) | 8, 1228, 1561 |
| Sfr274I | CTCGAG | 1 cut(s) | 1247 |
| SfuI | TTCGAA | 2 cut(s) | 37, 321 |
| SlaI | CTCGAG | 1 cut(s) | 1247 |
| SmlI | CTYRAG | 2 cut(s) | 902, 1247 |
| SmoI | CTYRAG | 2 cut(s) | 902, 1247 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1232 |
| SsiI | CCGC | 3 cut(s) | 71, 491, 1263 |
| SspMI | CTAG | 2 cut(s) | 1340, 1499 |
| SstI | GAGCTC | 1 cut(s) | 901 |
| StyD4I | CCNGG | 3 cut(s) | 170, 1192, 1405 |
| StyI | CCWWGG | 1 cut(s) | 1339 |
| TaaI | ACNGT | 3 cut(s) | 43, 290, 1119 |
| TaiI | ACGT | 4 cut(s) | 279, 345, 467, 993 |
| TaqI | TCGA | 6 cut(s) | 37, 321, 1248, 1418, 1422, 1542 |
| TatI | WGTACW | 1 cut(s) | 927 |
| TauI | GCSGC | 2 cut(s) | 73, 494 |
| TfiI | GAWTC | 6 cut(s) | 126, 335, 786, 919, 1189, 1463 |
| Tru1I | TTAA | 2 cut(s) | 1220, 1579 |
| Tru9I | TTAA | 2 cut(s) | 1220, 1579 |
| TscAI | CASTG | 2 cut(s) | 295, 726 |
| TseFI | GTSAC | 4 cut(s) | 240, 259, 281, 1457 |
| TseI | GCWGC | 4 cut(s) | 25, 943, 1002, 1504 |
| Tsp45I | GTSAC | 4 cut(s) | 240, 259, 281, 1457 |
| TspDTI | ATGAA | 5 cut(s) | 68, 515, 719, 1202, 1409 |
| TspGWI | ACGGA | 1 cut(s) | 651 |
| TspRI | CASTG | 2 cut(s) | 295, 726 |
| XapI | RAATTY | 7 cut(s) | 30, 157, 210, 458, 542, 732, 1445 |
| XceI | RCATGY | 1 cut(s) | 928 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1264 |
| XhoI | CTCGAG | 1 cut(s) | 1247 |
| XmaJI | CCTAGG | 1 cut(s) | 1339 |
| XmiI | GTMKAC | 1 cut(s) | 779 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1119 |
| XspI | CTAG | 2 cut(s) | 1340, 1499 |