Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0014514

Physical Location & Seq

Genomic Coordinates Forward (+)

5032918 .. 5034540

Gene Structure 1623 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00162590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGCAACCGGAACCACCGTCGTGACTATCAGAGAATTGGAGAACTCCTTGGTGCCCAAGTTGCTAAATTGTAAAACCGGACCAGGGTTGAAGAAAATTCACGCTCAAATGGTGAAGCTGTCCTTATCCCAGAGCAATTTTTTGGTGACAAAAATGGTGGATGTGTGCGACTACAGTGGGAATGTAGACTATGCTAGCTTGCTATTCAAACAAGTTGTTGAGCCAAATGTGTTTCTGTTCAATGCGATGATCCGAGCTTATACGCATAATCATATATATGGTTTGGCGATAACTTTGTATAAGCAAATGCTGAGACACCCAGAATCTGGAAACCCTATTTTTCCAGACAAATTCACATTCCCATTTGTTATAAAATGTTGTGCAGGGCTATATTGTGAAGATTTGGGGAGGCAAGTTCATGGTCAAGTATGTAAAATTGGGCCAGAGTCGCATTTGCTGATTGAGAATGCACTGGTGGATTTTTATACCAAGTGTGATCATTTGAGGGATGCACATAAGGTGTTTGAGGAAATGACTGAGAGAGATGTGATTACTTGGAATAGTCTTCTTACTGGGTATGTTAGGTTGGGCCAGATGAGAAAGGCAAGAGCAGTGTTTGAGGAAATTCCTGACAAGACTATTGTGTCTTGGACAGCCATGGTTTCAGGGTACACTCGAATCGGGTGTTATGGGGATGCTTTGGAGATTTTTCGACAAATGCAAATGCTGGGTATTGAGCCTGATGAGATCAGTGTTGTTGCTGTTTTGCCAGCATGCTCACAGCTTGGAGCTCTTGAGGTTGGGAAATGGATTCACAGGTACTCGGATAAAAAGCGGCTACTACAGTCGGTGTCTGTGTGCAATGCCCTGATTGAAATGTATGTCAAATGCGGTTGCATTGATCAAGCTTGGCAGTTGTTTGATCAGATGTTGGAGAGGGATGTGATTTCTTGGAGTACCATGATTGCCGGACTGGCGAATAATGGTAAAGCTCGCGAAGCAGTTGAGCTCTTTCAAGAGATGCAGAGAGCGAAGATTGAACCCAATGGGATTACATTTCTTGGTCTTTTATCAGCCTGCAGCCATGCTGGTTTATGGAAGGAGGGACTTGAGTATTTTGACTCCATGAGAGATGAGTATAAAATAGAGCCAGGAATTGAGCATTATGGTTGTTTAGTTGATCTTCTGGGACGTGCCGGACACCTTGATCAGGCTCTCGACAAAATAAAGCAGATGCCGATGAAGCCAGACTCAAAGATTTGGGGCTCCTTGTTAAGCTCTTGCAGGACTTATTGCAATCTTGAGATTGCTCTAGTTGCAATGGAGCAACTTCAAGAGCTTGAACCAGATGATGCAGGAAACTATGTACTACTTTCCAATATATATGCAGACCTGGGGAGGTGGGAGGATGCGTCGAGGATCAGGAAACTCATAAGAAGCAAAAGCATGAAGAAAATCCCAGGTTGCAGTTTGATCGAGGTTAACAATGCAGTTTTAGAATTCGTATCAAGGGATGATACAAAACCATTTGCAAAAGACATATTTTCCATGCTAGAGCTGCTGGTTTCACACCAAAGCATACCAGATGATAACATTGAAGCTGTGTCAGAGGATTGCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

540

Amino Acids

60.93

Weight (kDa)

5.63

Isoelectric Point (pI)

38.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	181 - 212	7.1e-06	PPR repeat family
PPR	PF01535	184 - 211	5.4e-06	PPR repeat
PPR_2	PF13041	213 - 259	5.2e-07	PPR repeat family
PPR	PF01535	215 - 245	1.2e-06	PPR repeat
PPR_2	PF13041	283 - 314	1.6e-06	PPR repeat family
PPR_1	PF12854	311 - 342	1.6e-06	PPR repeat
PPR_3	PF13812	311 - 360	2.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	313 - 361	2.5e-12	PPR repeat family
PPR	PF01535	316 - 345	7.8e-08	PPR repeat
E_motif	PF20431	431 - 493	1.8e-23	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20540 AT2G20540
fragaria_vesca	FvH4_2g36320
malus_domestica	MD15G1099800.v1.1
prunus_persica	Prupe.1G454600_v2.0.a1
pyrus_communis	pycom15g09180
rosa_chinensis	RchiOBHm_Chr6g0305561
rosa_laevigata	RLG00000010877
rosa_multiflora	Rmu_co8430547.1_g000001 Rmu_sc0000841.1_g000002 Rmu_sc0001153.1_g000005
rosa_roxburghii	Rroxscaffold_7G00162590
rosa_rugosa	Rorug06G0341700
rosa_samantha	Rh6AG453700 Rh6BG447900 Rh6DG454000
rosa_wichuraiana	Rw6G039540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	371
AasI	GACNNNNNNGTC	1 cut(s)	643
AccB1I	GGYRCC	1 cut(s)	52
AccB7I	CCANNNNNTGG	1 cut(s)	326
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	1 cut(s)	996
AciI	CCGC	2 cut(s)	835, 891
AclWI	GGATC	2 cut(s)	244, 1427
AcsI	RAATTY	4 cut(s)	96, 350, 624, 1499
AfaI	GTAC	4 cut(s)	671, 821, 958, 1368
AfiI	CCNNNNNNNGG	3 cut(s)	84, 326, 1210
AgsI	TTSAA	9 cut(s)	91, 208, 241, 875, 1016, 1040, 1334, 1343, 1598
AjiI	CACGTC	1 cut(s)	1193
AjnI	CCWGG	4 cut(s)	82, 1150, 1392, 1459
AleI	CACNNNNGTG	1 cut(s)	20
Alw21I	GWGCWC	2 cut(s)	793, 1011
Alw26I	GTCTC	1 cut(s)	307
AlwI	GGATC	2 cut(s)	244, 1427
AlwNI	CAGNNNCTG	1 cut(s)	326
AoxI	GGCC	2 cut(s)	440, 589
ApeKI	GCWGC	3 cut(s)	1080, 1558, 1617
ApoI	RAATTY	4 cut(s)	96, 350, 624, 1499
AspS9I	GGNCC	3 cut(s)	80, 440, 589
AsuHPI	GGTGA	2 cut(s)	124, 157
AsuNHI	GCTAGC	1 cut(s)	194
AvaII	GGWCC	1 cut(s)	80
BaeGI	GKGCMC	1 cut(s)	57
BanI	GGYRCC	1 cut(s)	52
BanII	GRGCYC	3 cut(s)	793, 1011, 1268
BbsI	GAAGAC	1 cut(s)	557
Bbv12I	GWGCWC	2 cut(s)	793, 1011
BbvI	GCAGC	3 cut(s)	1092, 1545, 1604
BcgI	CGANNNNNNTGC	2 cut(s)	1456, 1490
BciT130I	CCWGG	4 cut(s)	84, 1152, 1394, 1461
BclI	TGATCA	4 cut(s)	496, 901, 922, 1207
BcoDI	GTCTC	1 cut(s)	307
BfaI	CTAG	3 cut(s)	195, 1313, 1553
BfmI	CTRYAG	3 cut(s)	172, 842, 1078
BglI	GCCNNNNNGGC	1 cut(s)	974
BisI	GCNGC	4 cut(s)	836, 1081, 1559, 1618
BlsI	GCNGC	4 cut(s)	837, 1082, 1560, 1619
Bme1390I	CCNGG	4 cut(s)	84, 1152, 1394, 1461
Bme18I	GGWCC	1 cut(s)	80
BmgBI	CACGTC	1 cut(s)	1193
BmgT120I	GGNCC	3 cut(s)	80, 440, 589
BmiI	GGNNCC	3 cut(s)	13, 54, 1267
BmrFI	CCNGG	4 cut(s)	84, 1152, 1394, 1461
BmrI	ACTGGG	1 cut(s)	582
BmsI	GCATC	6 cut(s)	499, 685, 1011, 1224, 1342, 1399
BmtI	GCTAGC	1 cut(s)	198
BmuI	ACTGGG	1 cut(s)	582
BpiI	GAAGAC	1 cut(s)	557
BpuEI	CTTGAG	3 cut(s)	815, 1130, 1322
BsaJI	CCNNGG	5 cut(s)	48, 83, 657, 1393, 1459
BsaWI	WCCGGW	2 cut(s)	8, 77
BsaXI	ACNNNNNCTCC	2 cut(s)	1397, 1427
Bsc4I	CCNNNNNNNGG	3 cut(s)	84, 326, 1210
Bse1I	ACTGG	3 cut(s)	477, 577, 978
Bse3DI	GCAATG	2 cut(s)	868, 1326
BseBI	CCWGG	4 cut(s)	84, 1152, 1394, 1461
BseDI	CCNNGG	5 cut(s)	48, 83, 657, 1393, 1459
BseGI	GGATG	6 cut(s)	166, 514, 700, 946, 1414, 1519
BseLI	CCNNNNNNNGG	3 cut(s)	84, 326, 1210
BseMI	GCAATG	2 cut(s)	868, 1326
BseMII	CTCAG	2 cut(s)	302, 528
BseNI	ACTGG	3 cut(s)	477, 577, 978
BseSI	GKGCMC	1 cut(s)	57
BseXI	GCAGC	3 cut(s)	1092, 1545, 1604
BseYI	CCCAGC	1 cut(s)	727
BsgI	GTGCAG	1 cut(s)	402
Bsh1236I	CGCG	1 cut(s)	996
BshFI	GGCC	2 cut(s)	442, 591
BshNI	GGYRCC	1 cut(s)	52
BsiHKAI	GWGCWC	2 cut(s)	793, 1011
BsiSI	CCGG	4 cut(s)	9, 78, 969, 1197
BslFI	GGGAC	2 cut(s)	1119, 1203
BslI	CCNNNNNNNGG	3 cut(s)	84, 326, 1210
BsmAI	GTCTC	1 cut(s)	307
BsmFI	GGGAC	2 cut(s)	1119, 1203
BsmI	GAATGC	1 cut(s)	472
BsnI	GGCC	2 cut(s)	442, 591
Bsp1286I	GDGCHC	4 cut(s)	57, 793, 1011, 1268
Bsp143I	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
Bsp19I	CCATGG	1 cut(s)	657
Bsp68I	TCGCGA	1 cut(s)	996
BspACI	CCGC	2 cut(s)	835, 891
BspANI	GGCC	2 cut(s)	442, 591
BspCNI	CTCAG	2 cut(s)	303, 529
BspFNI	CGCG	1 cut(s)	996
BspLI	GGNNCC	3 cut(s)	13, 54, 1267
BspMAI	CTGCAG	1 cut(s)	1082
BspOI	GCTAGC	1 cut(s)	198
BspPI	GGATC	2 cut(s)	244, 1427
BspT107I	GGYRCC	1 cut(s)	52
BsrDI	GCAATG	2 cut(s)	868, 1326
BsrI	ACTGG	3 cut(s)	477, 577, 978
BssECI	CCNNGG	5 cut(s)	48, 83, 657, 1393, 1459
BssMI	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
BssT1I	CCWWGG	2 cut(s)	48, 657
Bst2UI	CCWGG	4 cut(s)	84, 1152, 1394, 1461
Bst4CI	ACNGT	3 cut(s)	19, 176, 846
BstC8I	GCNNGC	6 cut(s)	196, 200, 771, 775, 994, 1078
BstDEI	CTNAG	2 cut(s)	311, 537
BstDSI	CCRYGG	1 cut(s)	657
BstENI	CCTNNNNNAGG	1 cut(s)	1208
BstF5I	GGATG	6 cut(s)	166, 514, 700, 946, 1414, 1519
BstFNI	CGCG	1 cut(s)	996
BstKTI	GATC	9 cut(s)	252, 499, 750, 904, 925, 1183, 1210, 1422, 1476
BstMAI	GTCTC	1 cut(s)	307
BstMBI	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
BstMWI	GCNNNNNNNGC	7 cut(s)	61, 448, 974, 998, 1243, 1316, 1558
BstNI	CCWGG	4 cut(s)	84, 1152, 1394, 1461
BstNSI	RCATGY	1 cut(s)	777
BstSCI	CCNGG	4 cut(s)	82, 1150, 1392, 1459
BstSFI	CTRYAG	3 cut(s)	172, 842, 1078
BstSLI	GKGCMC	1 cut(s)	57
BstUI	CGCG	1 cut(s)	996
BstV1I	GCAGC	3 cut(s)	1092, 1545, 1604
BstV2I	GAAGAC	1 cut(s)	557
BsuRI	GGCC	2 cut(s)	442, 591
BtgI	CCRYGG	1 cut(s)	657
BtgZI	GCGATG	1 cut(s)	260
BtrI	CACGTC	1 cut(s)	1193
BtsCI	GGATG	6 cut(s)	166, 514, 700, 946, 1414, 1519
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	4 cut(s)	181, 470, 618, 757
BtuMI	TCGCGA	1 cut(s)	996
Cac8I	GCNNGC	6 cut(s)	196, 200, 771, 775, 994, 1078
CaiI	CAGNNNCTG	1 cut(s)	326
Cfr13I	GGNCC	3 cut(s)	80, 440, 589
CseI	GACGC	1 cut(s)	1401
Csp6I	GTAC	4 cut(s)	670, 820, 957, 1367
CspCI	CAANNNNNGTGG	2 cut(s)	138, 173
CviAII	CATG	8 cut(s)	419, 658, 774, 961, 1085, 1126, 1447, 1549
CviQI	GTAC	4 cut(s)	670, 820, 957, 1367
DdeI	CTNAG	2 cut(s)	311, 537
DpnI	GATC	9 cut(s)	251, 498, 749, 903, 924, 1182, 1209, 1421, 1475
DpnII	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
DrdI	GACNNNNNNGTC	1 cut(s)	643
DseDI	GACNNNNNNGTC	1 cut(s)	643
Ecl136II	GAGCTC	2 cut(s)	791, 1009
Eco130I	CCWWGG	2 cut(s)	48, 657
Eco24I	GRGCYC	3 cut(s)	793, 1011, 1268
Eco47I	GGWCC	1 cut(s)	80
Eco53kI	GAGCTC	2 cut(s)	791, 1009
EcoICRI	GAGCTC	2 cut(s)	791, 1009
EcoNI	CCTNNNNNAGG	1 cut(s)	1208
EcoRI	GAATTC	1 cut(s)	1499
EcoRII	CCWGG	4 cut(s)	82, 1150, 1392, 1459
EcoT14I	CCWWGG	2 cut(s)	48, 657
EcoT38I	GRGCYC	3 cut(s)	793, 1011, 1268
ErhI	CCWWGG	2 cut(s)	48, 657
FaeI	CATG	8 cut(s)	422, 661, 777, 964, 1088, 1129, 1450, 1552
FalI	AAGNNNNNCTT	2 cut(s)	107, 139
FaqI	GGGAC	2 cut(s)	1119, 1203
FatI	CATG	8 cut(s)	418, 657, 773, 960, 1084, 1125, 1446, 1548
FbaI	TGATCA	4 cut(s)	496, 901, 922, 1207
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	4 cut(s)	836, 1081, 1559, 1618
FokI	GGATG	6 cut(s)	173, 521, 707, 953, 1421, 1526
FriOI	GRGCYC	3 cut(s)	793, 1011, 1268
Fsp4HI	GCNGC	4 cut(s)	836, 1081, 1559, 1618
FspBI	CTAG	3 cut(s)	195, 1313, 1553
GluI	GCNGC	4 cut(s)	836, 1081, 1559, 1618
GsaI	CCCAGC	1 cut(s)	731
HaeIII	GGCC	2 cut(s)	442, 591
HapII	CCGG	4 cut(s)	9, 78, 969, 1197
HgaI	GACGC	1 cut(s)	1401
Hin1II	CATG	8 cut(s)	422, 661, 777, 964, 1088, 1129, 1450, 1552
HincII	GTYRAC	1 cut(s)	1483
HindII	GTYRAC	1 cut(s)	1483
HindIII	AAGCTT	1 cut(s)	906
HinfI	GANTC	6 cut(s)	323, 446, 678, 811, 1121, 1250
HpaI	GTTAAC	1 cut(s)	1483
HpaII	CCGG	4 cut(s)	9, 78, 969, 1197
HphI	GGTGA	2 cut(s)	124, 157
Hpy166II	GTNNAC	3 cut(s)	187, 672, 1483
Hpy188I	TCNGA	5 cut(s)	32, 254, 826, 927, 1609
Hpy8I	GTNNAC	3 cut(s)	187, 672, 1483
Hpy99I	CGWCG	2 cut(s)	23, 1417
HpyAV	CCTTC	1 cut(s)	1093
HpyCH4III	ACNGT	3 cut(s)	19, 176, 846
HpyCH4IV	ACGT	1 cut(s)	1192
HpyF10VI	GCNNNNNNNGC	7 cut(s)	61, 448, 974, 998, 1243, 1316, 1558
HpyF3I	CTNAG	2 cut(s)	311, 537
HpySE526I	ACGT	1 cut(s)	1192
Hsp92II	CATG	8 cut(s)	422, 661, 777, 964, 1088, 1129, 1450, 1552
Ksp22I	TGATCA	4 cut(s)	496, 901, 922, 1207
KspAI	GTTAAC	1 cut(s)	1483
Kzo9I	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
LmnI	GCTCC	3 cut(s)	788, 1271, 1324
Lsp1109I	GCAGC	3 cut(s)	1092, 1545, 1604
LweI	GCATC	6 cut(s)	499, 685, 1011, 1224, 1342, 1399
MaeI	CTAG	3 cut(s)	195, 1313, 1553
MaeII	ACGT	1 cut(s)	1192
MaeIII	GTNAC	2 cut(s)	22, 145
MalI	GATC	9 cut(s)	251, 498, 749, 903, 924, 1182, 1209, 1421, 1475
MboI	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
MboII	GAAGA	6 cut(s)	103, 410, 557, 1045, 1175, 1462
MhlI	GDGCHC	4 cut(s)	57, 793, 1011, 1268
MluCI	AATT	9 cut(s)	35, 67, 96, 136, 350, 435, 624, 1155, 1499
MlyI	GAGTC	3 cut(s)	455, 1115, 1244
MmeI	TCCRAC	1 cut(s)	912
MseI	TTAA	2 cut(s)	1274, 1482
MslI	CAYNNNNRTG	2 cut(s)	20, 276
MspI	CCGG	4 cut(s)	9, 78, 969, 1197
MspR9I	CCNGG	4 cut(s)	84, 1152, 1394, 1461
Mva1269I	GAATGC	1 cut(s)	472
MvaI	CCWGG	4 cut(s)	84, 1152, 1394, 1461
MvnI	CGCG	1 cut(s)	996
MwoI	GCNNNNNNNGC	7 cut(s)	61, 448, 974, 998, 1243, 1316, 1558
NcoI	CCATGG	1 cut(s)	657
NdeII	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
NheI	GCTAGC	1 cut(s)	194
NlaIII	CATG	8 cut(s)	422, 661, 777, 964, 1088, 1129, 1450, 1552
NlaIV	GGNNCC	3 cut(s)	13, 54, 1267
NmuCI	GTSAC	2 cut(s)	22, 145
NruI	TCGCGA	1 cut(s)	996
NspI	RCATGY	1 cut(s)	777
OliI	CACNNNNGTG	1 cut(s)	20
PaeI	GCATGC	1 cut(s)	777
PctI	GAATGC	1 cut(s)	472
PfeI	GAWTC	3 cut(s)	323, 678, 811
PflMI	CCANNNNNTGG	1 cut(s)	326
PkrI	GCNGC	4 cut(s)	837, 1082, 1560, 1619
PleI	GAGTC	3 cut(s)	454, 1115, 1244
PpsI	GAGTC	3 cut(s)	454, 1115, 1244
PsiI	TTATAA	1 cut(s)	371
Psp124BI	GAGCTC	2 cut(s)	793, 1011
Psp6I	CCWGG	4 cut(s)	82, 1150, 1392, 1459
PspFI	CCCAGC	1 cut(s)	727
PspGI	CCWGG	4 cut(s)	82, 1150, 1392, 1459
PspN4I	GGNNCC	3 cut(s)	13, 54, 1267
PspPI	GGNCC	3 cut(s)	80, 440, 589
PstI	CTGCAG	1 cut(s)	1082
PstNI	CAGNNNCTG	1 cut(s)	326
RruI	TCGCGA	1 cut(s)	996
RsaI	GTAC	4 cut(s)	671, 821, 958, 1368
RsaNI	GTAC	4 cut(s)	670, 820, 957, 1367
RseI	CAYNNNNRTG	2 cut(s)	20, 276
SacI	GAGCTC	2 cut(s)	793, 1011
SaqAI	TTAA	2 cut(s)	1274, 1482
SatI	GCNGC	4 cut(s)	836, 1081, 1559, 1618
Sau3AI	GATC	9 cut(s)	249, 496, 747, 901, 922, 1180, 1207, 1419, 1473
Sau96I	GGNCC	3 cut(s)	80, 440, 589
SchI	GAGTC	3 cut(s)	455, 1115, 1244
ScrFI	CCNGG	4 cut(s)	84, 1152, 1394, 1461
SduI	GDGCHC	4 cut(s)	57, 793, 1011, 1268
SfaNI	GCATC	6 cut(s)	499, 685, 1011, 1224, 1342, 1399
SfcI	CTRYAG	3 cut(s)	172, 842, 1078
SinI	GGWCC	1 cut(s)	80
SmiMI	CAYNNNNRTG	2 cut(s)	20, 276
SmlI	CTYRAG	3 cut(s)	794, 1109, 1301
SmoI	CTYRAG	3 cut(s)	794, 1109, 1301
SphI	GCATGC	1 cut(s)	777
Sse9I	AATT	9 cut(s)	35, 67, 96, 136, 350, 435, 624, 1155, 1499
SsiI	CCGC	2 cut(s)	835, 891
SspMI	CTAG	3 cut(s)	195, 1313, 1553
SstI	GAGCTC	2 cut(s)	793, 1011
StyD4I	CCNGG	4 cut(s)	82, 1150, 1392, 1459
StyI	CCWWGG	2 cut(s)	48, 657
TaaI	ACNGT	3 cut(s)	19, 176, 846
TaiI	ACGT	1 cut(s)	1195
TaqI	TCGA	5 cut(s)	676, 712, 1218, 1415, 1476
TasI	AATT	9 cut(s)	35, 67, 96, 136, 350, 435, 624, 1155, 1499
TatI	WGTACW	1 cut(s)	1366
TauI	GCSGC	1 cut(s)	838
TfiI	GAWTC	3 cut(s)	323, 678, 811
Tru1I	TTAA	2 cut(s)	1274, 1482
Tru9I	TTAA	2 cut(s)	1274, 1482
TscAI	CASTG	4 cut(s)	181, 477, 618, 757
TseFI	GTSAC	2 cut(s)	22, 145
TseI	GCWGC	3 cut(s)	1080, 1558, 1617
Tsp45I	GTSAC	2 cut(s)	22, 145
TspDTI	ATGAA	3 cut(s)	407, 1256, 1463
TspRI	CASTG	4 cut(s)	181, 477, 618, 757
Van91I	CCANNNNNTGG	1 cut(s)	326
VpaK11BI	GGWCC	1 cut(s)	80
XagI	CCTNNNNNAGG	1 cut(s)	1208
XapI	RAATTY	4 cut(s)	96, 350, 624, 1499
XceI	RCATGY	1 cut(s)	777
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	3 cut(s)	195, 1313, 1553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.